ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal18e14
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC134048.3| Oryza sativa (japonica cultivar-group) chromosome... 105 2e-19
2dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 105 2e-19
3dbj|AK120416.1| Oryza sativa (japonica cultivar-group) cDNA clon... 105 2e-19
4dbj|AK120409.1| Oryza sativa (japonica cultivar-group) cDNA clon... 105 2e-19
5gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 105 2e-19
6gb|AY111918.1| Zea mays CL35348_1 mRNA sequence 94 7e-16
7gb|BT024129.1| Zea mays clone EL01N0328C03 mRNA sequence 84 6e-13
8dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 72 2e-09
9dbj|AK100051.1| Oryza sativa (japonica cultivar-group) cDNA clon... 72 2e-09
10dbj|AK100044.1| Oryza sativa (japonica cultivar-group) cDNA clon... 72 2e-09
11gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 72 2e-09
12emb|AL831798.3|CNS08CAB Oryza sativa chromosome 12, . BAC OSJNBb... 72 2e-09
13gb|AC099694.12| Mus musculus, clone RP23-195D9, complete sequence 46 0.14
14gb|AC131652.2| Mus musculus BAC clone RP23-216A20 from 16, compl... 44 0.55
15gb|AC068473.19| Homo sapiens chromosome 18, clone RP11-567M16, c... 42 2.2
16gb|AC116713.8| Mus musculus chromosome 9, clone RP23-118M23, com... 42 2.2
17gb|AC073585.8| Homo sapiens chromosome 10 clone RP11-564D11, com... 42 2.2
18emb|AL732589.4| Mouse DNA sequence from clone RP23-405I23 on chr... 42 2.2
19dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.2
20gb|AC018445.21| Homo sapiens chromosome 18, clone RP11-196B3, co... 42 2.2
21dbj|BA000022.2| Synechocystis sp. PCC 6803 DNA, complete genome 42 2.2
22dbj|AP005641.4| Oryza sativa (japonica cultivar-group) genomic D... 42 2.2
23ref|XM_360335.1| Magnaporthe grisea 70-15 hypothetical protein (... 40 8.6
24gb|BT013145.1| Lycopersicon esculentum clone 134140R, mRNA sequence 40 8.6
25gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, comple... 40 8.6
26ref|XM_756696.1| Ustilago maydis 521 hypothetical protein (UM056... 40 8.6
27ref|XM_818099.1| Trypanosoma brucei TREU927 hypothetical protein... 40 8.6
28gb|BC063299.1| Homo sapiens cDNA clone IMAGE:30345565, partial cds 40 8.6
29gb|AC124436.5| Mus musculus BAC clone RP24-252O24 from chromosom... 40 8.6
30ref|XM_759652.1| Theileria parva strain Muguga translation initi... 40 8.6
31gb|AC115910.6| Mus musculus, clone RP24-480O17, complete sequence 40 8.6
32ref|XM_502123.1| Yarrowia lipolytica CLIB122, YALI0C22143g predi... 40 8.6
33emb|AL031120.1|HS459L4 Human DNA sequence from clone RP3-459L4 o... 40 8.6
34gb|AC139103.3| Homo sapiens chromosome 8, clone, complete sequence 40 8.6
35emb|AJ271361.2|FRU271361 Takifugu rubripes wnt2 (partial), frank... 40 8.6
36gb|BC098456.1| Homo sapiens cDNA clone IMAGE:30340418, with appa... 40 8.6
37gb|AC104162.2| Homo sapiens chromosome 3 clone RP11-50F24, compl... 40 8.6
38gb|AC113581.3| Tetraodon nigroviridis clone GSTNA-45F12, complet... 40 8.6
39gb|AC113579.3| Tetraodon nigroviridis clone GSTNA-27O10, complet... 40 8.6
40gb|AC087333.2|AC087333 Takifugu rubripes clone 244C11, complete ... 40 8.6
41gb|AC008728.7| Homo sapiens chromosome 5 clone CTB-99A3, complet... 40 8.6
42gb|AC090226.3| Homo sapiens chromosome 18, clone RP11-723D20, co... 40 8.6
43gb|AC022516.5| Homo sapiens chromosome 19 clone LLNLF-192G3, com... 40 8.6
44gb|AC008999.7| Homo sapiens chromosome 19 clone LLNLR-269B9, com... 40 8.6
45gb|AC156637.2| Mus musculus BAC clone RP24-241I18 from chromosom... 40 8.6
46dbj|AK043717.1| Mus musculus 10 days neonate cortex cDNA, RIKEN ... 40 8.6
47gb|AC010969.11| Homo sapiens BAC clone RP11-95D17 from 2, comple... 40 8.6
48gb|AC136289.2| Homo sapiens chromosome 3 clone RP11-584G1, compl... 40 8.6
49gb|AC011513.2|AC011513 Homo sapiens chromosome 19 clone LLNLF-11... 40 8.6
50emb|AL928988.14| Mouse DNA sequence from clone RP23-402M7 on chr... 40 8.6
51emb|AL121594.6|CNS01DRY Human chromosome 14 DNA sequence BAC R-1... 40 8.6
52ref|NG_001019.4| Homo sapiens immunoglobulin heavy locus (IGH@) ... 40 8.6
53gb|AC147634.3| Mus musculus BAC clone RP23-305G22 from 10, compl... 40 8.6
54emb|CR382129.1| Yarrowia lipolytica chromosome C of strain CLIB1... 40 8.6
55dbj|AB019440.1| Homo sapiens DNA for immunoglobulin heavy-chain ... 40 8.6 
>gb|AC134048.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone
            OSJNBb0076K20, complete sequence
          Length = 127338

 Score =  105 bits (53), Expect = 2e-19
 Identities = 149/181 (82%)
 Strand = Plus / Plus

                                                                        
Query: 438  cctctcctgcttgatcttctcatcctcaacagccaactccacaccatgttctaattccct 497
            |||||| |||||||||||||| |||||  ||||||| |||||||||||||| | ||||||
Sbjct: 7916 cctctcgtgcttgatcttctcgtcctcggcagccaattccacaccatgttccagttccct 7975

                                                                        
Query: 498  ctcaagtaggtcgtcatcatccatcacatctaccttcctagcaacataacccttcgaatt 557
            ||| | |||||| ||||||||||| | ||| |||||  |||||||||  || ||||| ||
Sbjct: 7976 ctcgattaggtcatcatcatccatgatatcaacctttttagcaacatcgcctttcgattt 8035

                                                                        
Query: 558  tcttcgcttctccaaagctgcctttaccttgtccttgtcaattttattcatggcatccat 617
             || || |||||||  || || || ||||| |||||||| || || ||||| ||||||||
Sbjct: 8036 cctccgtttctccagggcagctttcaccttatccttgtctatctttttcatcgcatccat 8095

             
Query: 618  c 618
            |
Sbjct: 8096 c 8096
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score =  105 bits (53), Expect = 2e-19
 Identities = 149/181 (82%)
 Strand = Plus / Minus

                                                                           
Query: 438     cctctcctgcttgatcttctcatcctcaacagccaactccacaccatgttctaattccct 497
               |||||| |||||||||||||| |||||  ||||||| |||||||||||||| | ||||||
Sbjct: 2718882 cctctcgtgcttgatcttctcgtcctcggcagccaattccacaccatgttccagttccct 2718823

                                                                           
Query: 498     ctcaagtaggtcgtcatcatccatcacatctaccttcctagcaacataacccttcgaatt 557
               ||| | |||||| ||||||||||| | ||| |||||  |||||||||  || ||||| ||
Sbjct: 2718822 ctcgattaggtcatcatcatccatgatatcaacctttttagcaacatcgcctttcgattt 2718763

                                                                           
Query: 558     tcttcgcttctccaaagctgcctttaccttgtccttgtcaattttattcatggcatccat 617
                || || |||||||  || || || ||||| |||||||| || || ||||| ||||||||
Sbjct: 2718762 cctccgtttctccagggcagctttcaccttatccttgtctatctttttcatcgcatccat 2718703

                
Query: 618     c 618
               |
Sbjct: 2718702 c 2718702
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>dbj|AK120416.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013093B10, full
            insert sequence
          Length = 5433

 Score =  105 bits (53), Expect = 2e-19
 Identities = 149/181 (82%)
 Strand = Plus / Minus

                                                                        
Query: 438  cctctcctgcttgatcttctcatcctcaacagccaactccacaccatgttctaattccct 497
            |||||| |||||||||||||| |||||  ||||||| |||||||||||||| | ||||||
Sbjct: 4862 cctctcgtgcttgatcttctcgtcctcggcagccaattccacaccatgttccagttccct 4803

                                                                        
Query: 498  ctcaagtaggtcgtcatcatccatcacatctaccttcctagcaacataacccttcgaatt 557
            ||| | |||||| ||||||||||| | ||| |||||  |||||||||  || ||||| ||
Sbjct: 4802 ctcgattaggtcatcatcatccatgatatcaacctttttagcaacatcgcctttcgattt 4743

                                                                        
Query: 558  tcttcgcttctccaaagctgcctttaccttgtccttgtcaattttattcatggcatccat 617
             || || |||||||  || || || ||||| |||||||| || || ||||| ||||||||
Sbjct: 4742 cctccgtttctccagggcagctttcaccttatccttgtctatctttttcatcgcatccat 4683

             
Query: 618  c 618
            |
Sbjct: 4682 c 4682
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>dbj|AK120409.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013091M21, full
            insert sequence
          Length = 2643

 Score =  105 bits (53), Expect = 2e-19
 Identities = 149/181 (82%)
 Strand = Plus / Minus

                                                                        
Query: 438  cctctcctgcttgatcttctcatcctcaacagccaactccacaccatgttctaattccct 497
            |||||| |||||||||||||| |||||  ||||||| |||||||||||||| | ||||||
Sbjct: 2076 cctctcgtgcttgatcttctcgtcctcggcagccaattccacaccatgttccagttccct 2017

                                                                        
Query: 498  ctcaagtaggtcgtcatcatccatcacatctaccttcctagcaacataacccttcgaatt 557
            ||| | |||||| ||||||||||| | ||| |||||  |||||||||  || ||||| ||
Sbjct: 2016 ctcgattaggtcatcatcatccatgatatcaacctttttagcaacatcgcctttcgattt 1957

                                                                        
Query: 558  tcttcgcttctccaaagctgcctttaccttgtccttgtcaattttattcatggcatccat 617
             || || |||||||  || || || ||||| |||||||| || || ||||| ||||||||
Sbjct: 1956 cctccgtttctccagggcagctttcaccttatccttgtctatctttttcatcgcatccat 1897

             
Query: 618  c 618
            |
Sbjct: 1896 c 1896
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score =  105 bits (53), Expect = 2e-19
 Identities = 149/181 (82%)
 Strand = Plus / Minus

                                                                           
Query: 438     cctctcctgcttgatcttctcatcctcaacagccaactccacaccatgttctaattccct 497
               |||||| |||||||||||||| |||||  ||||||| |||||||||||||| | ||||||
Sbjct: 2727913 cctctcgtgcttgatcttctcgtcctcggcagccaattccacaccatgttccagttccct 2727854

                                                                           
Query: 498     ctcaagtaggtcgtcatcatccatcacatctaccttcctagcaacataacccttcgaatt 557
               ||| | |||||| ||||||||||| | ||| |||||  |||||||||  || ||||| ||
Sbjct: 2727853 ctcgattaggtcatcatcatccatgatatcaacctttttagcaacatcgcctttcgattt 2727794

                                                                           
Query: 558     tcttcgcttctccaaagctgcctttaccttgtccttgtcaattttattcatggcatccat 617
                || || |||||||  || || || ||||| |||||||| || || ||||| ||||||||
Sbjct: 2727793 cctccgtttctccagggcagctttcaccttatccttgtctatctttttcatcgcatccat 2727734

                
Query: 618     c 618
               |
Sbjct: 2727733 c 2727733
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>gb|AY111918.1| Zea mays CL35348_1 mRNA sequence
          Length = 780

 Score = 93.7 bits (47), Expect = 7e-16
 Identities = 83/95 (87%)
 Strand = Plus / Plus

                                                                       
Query: 439 ctctcctgcttgatcttctcatcctcaacagccaactccacaccatgttctaattccctc 498
           ||||||||||||| ||||||||||||  ||||||||||||| |||||||| |  ||||||
Sbjct: 441 ctctcctgcttgaccttctcatcctcggcagccaactccacgccatgttccagctccctc 500

                                              
Query: 499 tcaagtaggtcgtcatcatccatcacatctacctt 533
           ||||  ||||| || |||||||||||||| |||||
Sbjct: 501 tcaatgaggtcatcgtcatccatcacatcgacctt 535
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>gb|BT024129.1| Zea mays clone EL01N0328C03 mRNA sequence
          Length = 1879

 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 147/182 (80%)
 Strand = Plus / Minus

                                                                        
Query: 439  ctctcctgcttgatcttctcatcctcaacagccaactccacaccatgttctaattccctc 498
            ||||| || |||| ||||||||||||  ||||||||||||| |||||||| |  ||||||
Sbjct: 1514 ctctcttgtttgaccttctcatcctcggcagccaactccacgccatgttccagctccctc 1455

                                                                        
Query: 499  tcaagtaggtcgtcatcatccatcacatctaccttcctagcaacataacccttcgaattt 558
            ||||  ||||| || |||||||||||||| ||||| || | || || ||| ||||| || 
Sbjct: 1454 tcaatgaggtcatcgtcatccatcacatcgacctttcttgaaaaatcacctttcgatttc 1395

                                                                        
Query: 559  cttcgcttctccaaagctgcctttaccttgtccttgtcaattttattcatggcatccatc 618
            || ||||||||||  || || || ||||| |||||||  |  || ||||| |||||||||
Sbjct: 1394 ctacgcttctccagtgccgctttcaccttatccttgtttaccttcttcatcgcatccatc 1335

              
Query: 619  at 620
            ||
Sbjct: 1334 at 1333
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 135/168 (80%)
 Strand = Plus / Minus

                                                                            
Query: 438      cctctcctgcttgatcttctcatcctcaacagccaactccacaccatgttctaattccct 497
                |||||||||||| ||||| | ||||||||||||||| || |   ||||||||| || |||
Sbjct: 18004352 cctctcctgctttatcttattatcctcaacagccaattcaatgtcatgttctagttgcct 18004293

                                                                            
Query: 498      ctcaagtaggtcgtcatcatccatcacatctaccttcctagcaacataacccttcgaatt 557
                ||||||    || |||||||| || || ||||||||||||||||||| ||| |||   ||
Sbjct: 18004292 ctcaagatcatcatcatcatctattacctctaccttcctagcaacatcacctttcagttt 18004233

                                                                
Query: 558      tcttcgcttctccaaagctgcctttaccttgtccttgtcaattttatt 605
                 ||| |||| ||||    ||| || ||||| |||||||||||||||||
Sbjct: 18004232 cctttgcttttccatttgtgctttcaccttatccttgtcaattttatt 18004185
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>dbj|AK100051.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013155O14, full
            insert sequence
          Length = 2511

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 135/168 (80%)
 Strand = Plus / Minus

                                                                        
Query: 438  cctctcctgcttgatcttctcatcctcaacagccaactccacaccatgttctaattccct 497
            |||||||||||| ||||| | ||||||||||||||| || |   ||||||||| || |||
Sbjct: 1757 cctctcctgctttatcttattatcctcaacagccaattcaatgtcatgttctagttgcct 1698

                                                                        
Query: 498  ctcaagtaggtcgtcatcatccatcacatctaccttcctagcaacataacccttcgaatt 557
            ||||||    || |||||||| || || ||||||||||||||||||| ||| |||   ||
Sbjct: 1697 ctcaagatcatcatcatcatctattacctctaccttcctagcaacatcacctttcagttt 1638

                                                            
Query: 558  tcttcgcttctccaaagctgcctttaccttgtccttgtcaattttatt 605
             ||| |||| ||||    ||| || ||||| |||||||||||||||||
Sbjct: 1637 cctttgcttttccatttgtgctttcaccttatccttgtcaattttatt 1590
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>dbj|AK100044.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013153K21, full
            insert sequence
          Length = 2571

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 135/168 (80%)
 Strand = Plus / Minus

                                                                        
Query: 438  cctctcctgcttgatcttctcatcctcaacagccaactccacaccatgttctaattccct 497
            |||||||||||| ||||| | ||||||||||||||| || |   ||||||||| || |||
Sbjct: 1755 cctctcctgctttatcttattatcctcaacagccaattcaatgtcatgttctagttgcct 1696

                                                                        
Query: 498  ctcaagtaggtcgtcatcatccatcacatctaccttcctagcaacataacccttcgaatt 557
            ||||||    || |||||||| || || ||||||||||||||||||| ||| |||   ||
Sbjct: 1695 ctcaagatcatcatcatcatctattacctctaccttcctagcaacatcacctttcagttt 1636

                                                            
Query: 558  tcttcgcttctccaaagctgcctttaccttgtccttgtcaattttatt 605
             ||| |||| ||||    ||| || ||||| |||||||||||||||||
Sbjct: 1635 cctttgcttttccatttgtgctttcaccttatccttgtcaattttatt 1588
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 135/168 (80%)
 Strand = Plus / Minus

                                                                            
Query: 438      cctctcctgcttgatcttctcatcctcaacagccaactccacaccatgttctaattccct 497
                |||||||||||| ||||| | ||||||||||||||| || |   ||||||||| || |||
Sbjct: 17930673 cctctcctgctttatcttattatcctcaacagccaattcaatgtcatgttctagttgcct 17930614

                                                                            
Query: 498      ctcaagtaggtcgtcatcatccatcacatctaccttcctagcaacataacccttcgaatt 557
                ||||||    || |||||||| || || ||||||||||||||||||| ||| |||   ||
Sbjct: 17930613 ctcaagatcatcatcatcatctattacctctaccttcctagcaacatcacctttcagttt 17930554

                                                                
Query: 558      tcttcgcttctccaaagctgcctttaccttgtccttgtcaattttatt 605
                 ||| |||| ||||    ||| || ||||| |||||||||||||||||
Sbjct: 17930553 cctttgcttttccatttgtgctttcaccttatccttgtcaattttatt 17930506
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>emb|AL831798.3|CNS08CAB Oryza sativa chromosome 12, . BAC OSJNBb0031E19 of library OSJNBb from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 124294

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 135/168 (80%)
 Strand = Plus / Plus

                                                                         
Query: 438   cctctcctgcttgatcttctcatcctcaacagccaactccacaccatgttctaattccct 497
             |||||||||||| ||||| | ||||||||||||||| || |   ||||||||| || |||
Sbjct: 81340 cctctcctgctttatcttattatcctcaacagccaattcaatgtcatgttctagttgcct 81399

                                                                         
Query: 498   ctcaagtaggtcgtcatcatccatcacatctaccttcctagcaacataacccttcgaatt 557
             ||||||    || |||||||| || || ||||||||||||||||||| ||| |||   ||
Sbjct: 81400 ctcaagatcatcatcatcatctattacctctaccttcctagcaacatcacctttcagttt 81459

                                                             
Query: 558   tcttcgcttctccaaagctgcctttaccttgtccttgtcaattttatt 605
              ||| |||| ||||    ||| || ||||| |||||||||||||||||
Sbjct: 81460 cctttgcttttccatttgtgctttcaccttatccttgtcaattttatt 81507
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>gb|AC099694.12| Mus musculus, clone RP23-195D9, complete sequence
          Length = 191204

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 529    accttcctagcaacataaccctt 551
              |||||||||||||||||||||||
Sbjct: 173446 accttcctagcaacataaccctt 173424
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>gb|AC131652.2| Mus musculus BAC clone RP23-216A20 from 16, complete sequence
          Length = 184989

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 600    tttattcatggcatccatcatg 621
              ||||||||||||||||||||||
Sbjct: 106176 tttattcatggcatccatcatg 106197
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>gb|AC068473.19| Homo sapiens chromosome 18, clone RP11-567M16, complete sequence
          Length = 175721

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 57   ctggatgtctcatcaacagtc 77
            |||||||||||||||||||||
Sbjct: 3780 ctggatgtctcatcaacagtc 3800
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>gb|AC116713.8| Mus musculus chromosome 9, clone RP23-118M23, complete sequence
          Length = 275731

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 589    tccttgtcaattttattcatg 609
              |||||||||||||||||||||
Sbjct: 233879 tccttgtcaattttattcatg 233859
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>gb|AC073585.8| Homo sapiens chromosome 10 clone RP11-564D11, complete sequence
          Length = 197295

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 192    atgttttcatgtctaccaaca 212
              |||||||||||||||||||||
Sbjct: 164864 atgttttcatgtctaccaaca 164844
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>emb|AL732589.4| Mouse DNA sequence from clone RP23-405I23 on chromosome 11 Contains a
             3'-5' exoribonuclease CSL4 homolog pseudogene and a
             glutamate-ammonia ligase (glutamine synthase) (Glul)
             pseudogene, complete sequence
          Length = 134644

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 30    aaaacatctgggtacaaacat 50
             |||||||||||||||||||||
Sbjct: 48343 aaaacatctgggtacaaacat 48363
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 472      aactccacaccatgttctaat 492
                |||||||||||||||||||||
Sbjct: 15841769 aactccacaccatgttctaat 15841749
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>gb|AC018445.21| Homo sapiens chromosome 18, clone RP11-196B3, complete sequence
          Length = 162265

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 57   ctggatgtctcatcaacagtc 77
            |||||||||||||||||||||
Sbjct: 9697 ctggatgtctcatcaacagtc 9677
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>dbj|BA000022.2| Synechocystis sp. PCC 6803 DNA, complete genome
          Length = 3573470

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 442     tcctgcttgatcttctcatcctcaa 466
               |||||||||| ||||||||||||||
Sbjct: 2325982 tcctgcttgagcttctcatcctcaa 2325958
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>dbj|AP005641.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBa0027N13
          Length = 179669

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 472   aactccacaccatgttctaat 492
             |||||||||||||||||||||
Sbjct: 81283 aactccacaccatgttctaat 81263
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>ref|XM_360335.1| Magnaporthe grisea 70-15 hypothetical protein (MG05709.4) partial
           mRNA
          Length = 1611

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 447 cttgatcttctcatcctcaa 466
           ||||||||||||||||||||
Sbjct: 975 cttgatcttctcatcctcaa 956
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>gb|BT013145.1| Lycopersicon esculentum clone 134140R, mRNA sequence
          Length = 1221

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 597 aattttattcatggcatcca 616
           ||||||||||||||||||||
Sbjct: 58  aattttattcatggcatcca 77
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>gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, complete sequence
          Length = 6365727

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 569    ccaaagctgcctttaccttgtcct 592
              ||||||||||| ||||||||||||
Sbjct: 733899 ccaaagctgccattaccttgtcct 733876
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>ref|XM_756696.1| Ustilago maydis 521 hypothetical protein (UM05642.1) partial mRNA
          Length = 4404

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 439  ctctcctgcttgatcttctc 458
            ||||||||||||||||||||
Sbjct: 3404 ctctcctgcttgatcttctc 3385
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>ref|XM_818099.1| Trypanosoma brucei TREU927 hypothetical protein (Tb10.6k15.0650)
           partial mRNA
          Length = 5514

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 564 cttctccaaagctgcctttacctt 587
           ||||| ||||||||||||||||||
Sbjct: 409 cttcttcaaagctgcctttacctt 386
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>gb|BC063299.1| Homo sapiens cDNA clone IMAGE:30345565, partial cds
          Length = 5417

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 366  gccattattgtccccatttt 385
            ||||||||||||||||||||
Sbjct: 2168 gccattattgtccccatttt 2187
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>gb|AC124436.5| Mus musculus BAC clone RP24-252O24 from chromosome 10, complete
             sequence
          Length = 174497

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 34    catctgggtacaaacatgaa 53
             ||||||||||||||||||||
Sbjct: 96351 catctgggtacaaacatgaa 96370
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>ref|XM_759652.1| Theileria parva strain Muguga translation initiation factor IF-2
            (TP02_0181) partial mRNA
          Length = 2766

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 323  ccagaacctcagcctctttt 342
            ||||||||||||||||||||
Sbjct: 2266 ccagaacctcagcctctttt 2247
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>gb|AC115910.6| Mus musculus, clone RP24-480O17, complete sequence
          Length = 257036

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 40    ggtacaaacatgaagacctg 59
             ||||||||||||||||||||
Sbjct: 54296 ggtacaaacatgaagacctg 54315
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>ref|XM_502123.1| Yarrowia lipolytica CLIB122, YALI0C22143g predicted mRNA
          Length = 2796

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 220  caccatggtggctcacgctgtgct 243
            |||||||||||||| |||||||||
Sbjct: 2077 caccatggtggctctcgctgtgct 2054
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>emb|AL031120.1|HS459L4 Human DNA sequence from clone RP3-459L4 on chromosome 6p22.3-24.1
              Contains part of the SCA1 gene for spinocerebellar ataxia 1
              (olivopontocerebellar ataxia 1, autosomal dominant, ataxin
              1), complete sequence
          Length = 165363

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 436    tccctctcctgcttgatctt 455
              ||||||||||||||||||||
Sbjct: 111987 tccctctcctgcttgatctt 112006
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>gb|AC139103.3| Homo sapiens chromosome 8, clone, complete sequence
          Length = 166920

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 218    agcaccatggtggctcacgc 237
              ||||||||||||||||||||
Sbjct: 106820 agcaccatggtggctcacgc 106839
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>emb|AJ271361.2|FRU271361 Takifugu rubripes wnt2 (partial), frank1, cftr and frank2 (partial)
             genes
          Length = 60726

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 440   tctcctgcttgatcttctca 459
             ||||||||||||||||||||
Sbjct: 23331 tctcctgcttgatcttctca 23312
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>gb|BC098456.1| Homo sapiens cDNA clone IMAGE:30340418, with apparent retained intron
          Length = 5417

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 366  gccattattgtccccatttt 385
            ||||||||||||||||||||
Sbjct: 2169 gccattattgtccccatttt 2188
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>gb|AC104162.2| Homo sapiens chromosome 3 clone RP11-50F24, complete sequence
          Length = 178337

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 367    ccattattgtccccattttctgca 390
              ||||||||||||||||||| ||||
Sbjct: 155383 ccattattgtccccattttatgca 155406
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>gb|AC113581.3| Tetraodon nigroviridis clone GSTNA-45F12, complete sequence
          Length = 115385

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 440    tctcctgcttgatcttctca 459
              ||||||||||||||||||||
Sbjct: 108230 tctcctgcttgatcttctca 108211
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>gb|AC113579.3| Tetraodon nigroviridis clone GSTNA-27O10, complete sequence
          Length = 79804

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 440   tctcctgcttgatcttctca 459
             ||||||||||||||||||||
Sbjct: 21613 tctcctgcttgatcttctca 21594
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>gb|AC087333.2|AC087333 Takifugu rubripes clone 244C11, complete sequence
          Length = 78437

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 440   tctcctgcttgatcttctca 459
             ||||||||||||||||||||
Sbjct: 17190 tctcctgcttgatcttctca 17171
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>gb|AC008728.7| Homo sapiens chromosome 5 clone CTB-99A3, complete sequence
          Length = 165853

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 366    gccattattgtccccatttt 385
              ||||||||||||||||||||
Sbjct: 112254 gccattattgtccccatttt 112273
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>gb|AC090226.3| Homo sapiens chromosome 18, clone RP11-723D20, complete sequence
          Length = 173602

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 367    ccattattgtccccattttctgca 390
              |||||||| |||||||||||||||
Sbjct: 100809 ccattattatccccattttctgca 100786
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>gb|AC022516.5| Homo sapiens chromosome 19 clone LLNLF-192G3, complete sequence
          Length = 43593

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 186 cattttatgttttcatgtct 205
           ||||||||||||||||||||
Sbjct: 607 cattttatgttttcatgtct 588
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>gb|AC008999.7| Homo sapiens chromosome 19 clone LLNLR-269B9, complete sequence
          Length = 39707

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 186   cattttatgttttcatgtct 205
             ||||||||||||||||||||
Sbjct: 37099 cattttatgttttcatgtct 37080
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>gb|AC156637.2| Mus musculus BAC clone RP24-241I18 from chromosome 12, complete
             sequence
          Length = 156014

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 40    ggtacaaacatgaagacctg 59
             ||||||||||||||||||||
Sbjct: 84437 ggtacaaacatgaagacctg 84456
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>dbj|AK043717.1| Mus musculus 10 days neonate cortex cDNA, RIKEN full-length
           enriched library, clone:A830023H09
           product:unclassifiable, full insert sequence
          Length = 1874

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 34  catctgggtacaaacatgaa 53
           ||||||||||||||||||||
Sbjct: 512 catctgggtacaaacatgaa 531
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>gb|AC010969.11| Homo sapiens BAC clone RP11-95D17 from 2, complete sequence
          Length = 190748

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 366    gccattattgtccccatttt 385
              ||||||||||||||||||||
Sbjct: 131306 gccattattgtccccatttt 131325
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>gb|AC136289.2| Homo sapiens chromosome 3 clone RP11-584G1, complete sequence
          Length = 191776

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 367    ccattattgtccccattttctgca 390
              ||||||||||||||||||| ||||
Sbjct: 169692 ccattattgtccccattttatgca 169669
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>gb|AC011513.2|AC011513 Homo sapiens chromosome 19 clone LLNLF-112E5, complete sequence
          Length = 40520

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 186   cattttatgttttcatgtct 205
             ||||||||||||||||||||
Sbjct: 39592 cattttatgttttcatgtct 39573



 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 186  cattttatgttttcatgtct 205
            ||||||||||||||||||||
Sbjct: 1330 cattttatgttttcatgtct 1311
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>emb|AL928988.14| Mouse DNA sequence from clone RP23-402M7 on chromosome 2, complete
              sequence
          Length = 121977

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 119    taccaagaattctaccaagt 138
              ||||||||||||||||||||
Sbjct: 112435 taccaagaattctaccaagt 112454
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>emb|AL121594.6|CNS01DRY Human chromosome 14 DNA sequence BAC R-173D9 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 196023

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 193    tgttttcatgtctaccaaca 212
              ||||||||||||||||||||
Sbjct: 152760 tgttttcatgtctaccaaca 152779
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>ref|NG_001019.4| Homo sapiens immunoglobulin heavy locus (IGH@) on chromosome 14
          Length = 1279711

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 514    tcatccatcacatctacctt 533
              ||||||||||||||||||||
Sbjct: 730580 tcatccatcacatctacctt 730561
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>gb|AC147634.3| Mus musculus BAC clone RP23-305G22 from 10, complete sequence
          Length = 207157

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 34   catctgggtacaaacatgaa 53
            ||||||||||||||||||||
Sbjct: 7690 catctgggtacaaacatgaa 7671
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>emb|CR382129.1| Yarrowia lipolytica chromosome C of strain CLIB122 of Yarrowia lipolytica
          Length = 3272609

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 220     caccatggtggctcacgctgtgct 243
               |||||||||||||| |||||||||
Sbjct: 2958559 caccatggtggctctcgctgtgct 2958536
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>dbj|AB019440.1| Homo sapiens DNA for immunoglobulin heavy-chain variable region, complete
              sequence, 4 of 5
          Length = 200000

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 514    tcatccatcacatctacctt 533
              ||||||||||||||||||||
Sbjct: 130580 tcatccatcacatctacctt 130561


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,559,331
Number of Sequences: 3902068
Number of extensions: 6559331
Number of successful extensions: 142716
Number of sequences better than 10.0: 55
Number of HSP's better than 10.0 without gapping: 55
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 142356
Number of HSP's gapped (non-prelim): 355
length of query: 633
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 610
effective length of database: 17,143,297,704
effective search space: 10457411599440
effective search space used: 10457411599440
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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