>PRKDC_XENLA (Q9DEI1) DNA-dependent protein kinase catalytic subunit (EC 2.7.11.1)|
            (DNA-PK catalytic subunit) (DNA-PKcs)
          Length = 4146

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 13/37 (35%), Positives = 18/37 (48%)
 Frame = -2

Query: 278  PKRFTHXLXACTFEYEDWLAERCGREGIEXWRKAIHV 168
            P+ F      C F+   WL E+CGR   E   KA+ +
Sbjct: 1176 PRGFPQGNTVCLFDIVLWLLEQCGRPQTECRHKAMQL 1212

>PRKDC_CANFA (Q8WN22) DNA-dependent protein kinase catalytic subunit (EC 2.7.11.1)|
            (DNA-PK catalytic subunit) (DNA-PKcs)
          Length = 4144

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 12/38 (31%), Positives = 16/38 (42%)
 Frame = -2

Query: 281  RPKRFTHXLXACTFEYEDWLAERCGREGIEXWRKAIHV 168
            RP+ F      C  +   WL   CGR   E   K+I +
Sbjct: 1163 RPRGFPPSASLCLLDMVQWLLAHCGRPQTECRHKSIEL 1200

>PGK_CANAL (P46273) Phosphoglycerate kinase (EC 2.7.2.3)|
          Length = 417

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 10/32 (31%), Positives = 21/32 (65%)
 Frame = -2

Query: 233 EDWLAERCGREGIEXWRKAIHVKARARVWHRP 138
           ++W+   CG + +E +++A+  KA+  VW+ P
Sbjct: 308 DNWMGLDCGPKSVELFQQAV-AKAKTIVWNGP 338


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 35,417,119
Number of Sequences: 219361
Number of extensions: 446311
Number of successful extensions: 901
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 884
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 901
length of database: 80,573,946
effective HSP length: 99
effective length of database: 58,857,207
effective search space used: 1412572968
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)