ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaal18c16 |
|---|---|
| Clone Library Name | barley_pub |
>ACKA2_LISMF (Q71Z86) Acetate kinase 2 (EC 2.7.2.1) (Acetokinase 2)| Length = 397 Score = 31.6 bits (70), Expect = 2.0 Identities = 21/80 (26%), Positives = 34/80 (42%) Frame = -2 Query: 526 SIAVPEGGNNWFWLMTLSPLAGVYYWTKASRKEEIKVKMVLSDDGNNVSEILVRGDDVQV 347 SIA EGG + M +PLAGV T++ + + ++ G ++L Sbjct: 212 SIAAIEGGKSMDTSMGFTPLAGVSMGTRSGNIDPALIPFIMEKTGKTAEQVL-------- 263 Query: 346 EQMRRELKMSEKGMIYVKGI 287 ++ E GM+ V GI Sbjct: 264 -----DVLNKESGMLGVSGI 278
>ACKA1_LISMO (Q8Y6V0) Acetate kinase 1 (EC 2.7.2.1) (Acetokinase 1)| Length = 397 Score = 31.6 bits (70), Expect = 2.0 Identities = 21/80 (26%), Positives = 34/80 (42%) Frame = -2 Query: 526 SIAVPEGGNNWFWLMTLSPLAGVYYWTKASRKEEIKVKMVLSDDGNNVSEILVRGDDVQV 347 SIA EGG + M +PLAGV T++ + + ++ G ++L Sbjct: 212 SIAAIEGGKSMDTSMGFTPLAGVSMGTRSGNIDPALIPFIMEKTGKTAEQVL-------- 263 Query: 346 EQMRRELKMSEKGMIYVKGI 287 ++ E GM+ V GI Sbjct: 264 -----DVLNKESGMLGVSGI 278
>ACKA1_LISIN (Q92BD4) Acetate kinase 1 (EC 2.7.2.1) (Acetokinase 1)| Length = 397 Score = 31.6 bits (70), Expect = 2.0 Identities = 21/80 (26%), Positives = 34/80 (42%) Frame = -2 Query: 526 SIAVPEGGNNWFWLMTLSPLAGVYYWTKASRKEEIKVKMVLSDDGNNVSEILVRGDDVQV 347 SIA EGG + M +PLAGV T++ + + ++ G ++L Sbjct: 212 SIAAIEGGKSMDTSMGFTPLAGVSMGTRSGNIDPALIPFIMEKTGKTAEQVL-------- 263 Query: 346 EQMRRELKMSEKGMIYVKGI 287 ++ E GM+ V GI Sbjct: 264 -----DVLNKESGMLGVSGI 278
>ACKA_BACCR (Q817C0) Acetate kinase (EC 2.7.2.1) (Acetokinase)| Length = 397 Score = 31.2 bits (69), Expect = 2.6 Identities = 16/52 (30%), Positives = 26/52 (50%) Frame = -2 Query: 526 SIAVPEGGNNWFWLMTLSPLAGVYYWTKASRKEEIKVKMVLSDDGNNVSEIL 371 SIA EGG + M +PLAGV T++ + + ++ G V E++ Sbjct: 212 SIAAVEGGKSIDTSMGFTPLAGVTMGTRSGNLDPALIPYIMEKTGQTVEEVV 263
>ACKA_BACLD (Q65G65) Acetate kinase (EC 2.7.2.1) (Acetokinase)| Length = 395 Score = 30.8 bits (68), Expect = 3.4 Identities = 16/52 (30%), Positives = 25/52 (48%) Frame = -2 Query: 526 SIAVPEGGNNWFWLMTLSPLAGVYYWTKASRKEEIKVKMVLSDDGNNVSEIL 371 SIA EGG + M +PLAGV T++ + + ++ G E+L Sbjct: 212 SIAAVEGGKSIDTSMGFTPLAGVAMGTRSGNIDPALIPFIMEKTGQTADEVL 263
>ACKA_BACHK (Q6HCP0) Acetate kinase (EC 2.7.2.1) (Acetokinase)| Length = 397 Score = 30.8 bits (68), Expect = 3.4 Identities = 16/52 (30%), Positives = 26/52 (50%) Frame = -2 Query: 526 SIAVPEGGNNWFWLMTLSPLAGVYYWTKASRKEEIKVKMVLSDDGNNVSEIL 371 SIA EGG + M +PLAGV T++ + + ++ G V E++ Sbjct: 212 SIAAVEGGKSIDTSMGFTPLAGVTMGTRSGNIDPALIPYIMEKTGQTVEEVV 263
>ACKA_BACCZ (Q633F8) Acetate kinase (EC 2.7.2.1) (Acetokinase)| Length = 397 Score = 30.8 bits (68), Expect = 3.4 Identities = 16/52 (30%), Positives = 26/52 (50%) Frame = -2 Query: 526 SIAVPEGGNNWFWLMTLSPLAGVYYWTKASRKEEIKVKMVLSDDGNNVSEIL 371 SIA EGG + M +PLAGV T++ + + ++ G V E++ Sbjct: 212 SIAAVEGGKSIDTSMGFTPLAGVTMGTRSGNIDPALIPYIMEKTGQTVEEVV 263
>ACKA_BACC1 (Q72Z96) Acetate kinase (EC 2.7.2.1) (A cetokinase)| Length = 397 Score = 30.8 bits (68), Expect = 3.4 Identities = 16/52 (30%), Positives = 26/52 (50%) Frame = -2 Query: 526 SIAVPEGGNNWFWLMTLSPLAGVYYWTKASRKEEIKVKMVLSDDGNNVSEIL 371 SIA EGG + M +PLAGV T++ + + ++ G V E++ Sbjct: 212 SIAAVEGGKSIDTSMGFTPLAGVTMGTRSGNIDPALIPYIMEKTGQTVEEVV 263
>ACKA_BACAN (Q81KV0) Acetate kinase (EC 2.7.2.1) (Acetokinase)| Length = 397 Score = 30.8 bits (68), Expect = 3.4 Identities = 16/52 (30%), Positives = 26/52 (50%) Frame = -2 Query: 526 SIAVPEGGNNWFWLMTLSPLAGVYYWTKASRKEEIKVKMVLSDDGNNVSEIL 371 SIA EGG + M +PLAGV T++ + + ++ G V E++ Sbjct: 212 SIAAVEGGKSIDTSMGFTPLAGVTMGTRSGNIDPALIPYIMEKTGQTVEEVV 263
>ACKA_STAES (Q8CS60) Acetate kinase (EC 2.7.2.1) (Acetokinase)| Length = 417 Score = 30.4 bits (67), Expect = 4.4 Identities = 16/57 (28%), Positives = 27/57 (47%) Frame = -2 Query: 541 VGLVLSIAVPEGGNNWFWLMTLSPLAGVYYWTKASRKEEIKVKMVLSDDGNNVSEIL 371 +G SIA +GG + M +PLAGV T++ + + ++ G E+L Sbjct: 208 IGNGASIAAIDGGESIDTSMGFTPLAGVTMGTRSGNLDPALIPFIMEKTGKTADEVL 264
>ACKA_STAEQ (Q5HNJ4) Acetate kinase (EC 2.7.2.1) (Acetokinase)| Length = 417 Score = 30.4 bits (67), Expect = 4.4 Identities = 16/57 (28%), Positives = 27/57 (47%) Frame = -2 Query: 541 VGLVLSIAVPEGGNNWFWLMTLSPLAGVYYWTKASRKEEIKVKMVLSDDGNNVSEIL 371 +G SIA +GG + M +PLAGV T++ + + ++ G E+L Sbjct: 208 IGNGASIAAIDGGESIDTSMGFTPLAGVTMGTRSGNLDPALIPFIMEKTGKTADEVL 264
>ACKA_BACSU (P37877) Acetate kinase (EC 2.7.2.1) (Acetokinase)| Length = 395 Score = 30.4 bits (67), Expect = 4.4 Identities = 16/52 (30%), Positives = 25/52 (48%) Frame = -2 Query: 526 SIAVPEGGNNWFWLMTLSPLAGVYYWTKASRKEEIKVKMVLSDDGNNVSEIL 371 SIA EGG + M +PLAGV T++ + + ++ G E+L Sbjct: 212 SIAAVEGGKSIDTSMGFTPLAGVAMGTRSGNIDPALIPYIMEKTGQTADEVL 263
>RPOB_PINTH (P41607) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (PEP)| (Plastid-encoded RNA polymerase beta subunit) (RNA polymerase beta subunit) Length = 1075 Score = 29.6 bits (65), Expect = 7.5 Identities = 13/31 (41%), Positives = 20/31 (64%) Frame = -2 Query: 463 GVYYWTKASRKEEIKVKMVLSDDGNNVSEIL 371 G W + SRK++I + ++LS G N+ EIL Sbjct: 166 GERIWARVSRKQKISIPVLLSAMGLNLEEIL 196
>AQP7_MOUSE (O54794) Aquaporin-7 (AQP-7)| Length = 303 Score = 29.6 bits (65), Expect = 7.5 Identities = 9/17 (52%), Positives = 13/17 (76%) Frame = -2 Query: 505 GNNWFWLMTLSPLAGVY 455 GNNW+W+ ++PL G Y Sbjct: 235 GNNWWWVPVVAPLLGAY 251
>RPOB_SOYBN (Q8HVY5) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (PEP)| (Plastid-encoded RNA polymerase beta subunit) (RNA polymerase beta subunit) Length = 1070 Score = 29.6 bits (65), Expect = 7.5 Identities = 12/27 (44%), Positives = 20/27 (74%) Frame = -2 Query: 451 WTKASRKEEIKVKMVLSDDGNNVSEIL 371 W + SRK++I + ++ S G+N+SEIL Sbjct: 169 WARVSRKQKISILVLSSAMGSNLSEIL 195
>ACKA_BACSK (Q5WED5) Acetate kinase (EC 2.7.2.1) (Acetokinase)| Length = 395 Score = 29.6 bits (65), Expect = 7.5 Identities = 15/52 (28%), Positives = 27/52 (51%) Frame = -2 Query: 526 SIAVPEGGNNWFWLMTLSPLAGVYYWTKASRKEEIKVKMVLSDDGNNVSEIL 371 SIA +GG + M +PLAGV T++ + + ++ G +V E++ Sbjct: 212 SIAAVKGGKSIDTSMGFTPLAGVTMGTRSGNIDPALIPYIMEKTGQSVEEVV 263
>AQP7_RAT (P56403) Aquaporin-7 (AQP-7)| Length = 269 Score = 29.6 bits (65), Expect = 7.5 Identities = 9/17 (52%), Positives = 13/17 (76%) Frame = -2 Query: 505 GNNWFWLMTLSPLAGVY 455 GNNW+W+ ++PL G Y Sbjct: 234 GNNWWWVPVVAPLLGAY 250
>TRUD_HAEI8 (Q4QML9) tRNA pseudouridine synthase D (EC 5.4.99.-) (tRNA-uridine| isomerase D) (tRNA pseudouridylate synthase D) Length = 339 Score = 29.3 bits (64), Expect = 9.8 Identities = 16/61 (26%), Positives = 31/61 (50%) Frame = -2 Query: 535 LVLSIAVPEGGNNWFWLMTLSPLAGVYYWTKASRKEEIKVKMVLSDDGNNVSEILVRGDD 356 LV++ + +G N + LAG + W KA KE++ V V ++ + + + G+D Sbjct: 205 LVVAARIAKGATNQVLPNDIVQLAGSHSWFKADEKEDLTVLQVRLENQDILLTAPLIGED 264 Query: 355 V 353 + Sbjct: 265 I 265 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 84,868,960 Number of Sequences: 219361 Number of extensions: 1754739 Number of successful extensions: 4594 Number of sequences better than 10.0: 18 Number of HSP's better than 10.0 without gapping: 4484 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4594 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5653129581 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
