ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaal18c07 |
|---|---|
| Clone Library Name | barley_pub |
>MDHC_ORYSA (Q7XDC8) Malate dehydrogenase, cytoplasmic (EC 1.1.1.37) (PP37)| Length = 332 Score = 63.9 bits (154), Expect = 1e-10 Identities = 31/34 (91%), Positives = 31/34 (91%) Frame = -3 Query: 244 TIVQGLPIDEFSRKKMDATAQELXXEKALAYSCL 143 TIVQGLPIDEFSRKKMDATAQEL EK LAYSCL Sbjct: 298 TIVQGLPIDEFSRKKMDATAQELSEEKTLAYSCL 331
>MDHC_MAIZE (Q08062) Malate dehydrogenase, cytoplasmic (EC 1.1.1.37)| Length = 332 Score = 63.9 bits (154), Expect = 1e-10 Identities = 31/34 (91%), Positives = 31/34 (91%) Frame = -3 Query: 241 IVQGLPIDEFSRKKMDATAQELXXEKALAYSCLE 140 IVQGLPIDEFSRKKMDATAQEL EK LAYSCLE Sbjct: 299 IVQGLPIDEFSRKKMDATAQELTEEKTLAYSCLE 332
>MDHC_MESCR (O24047) Malate dehydrogenase, cytoplasmic (EC 1.1.1.37)| Length = 332 Score = 56.6 bits (135), Expect = 2e-08 Identities = 28/34 (82%), Positives = 29/34 (85%) Frame = -3 Query: 244 TIVQGLPIDEFSRKKMDATAQELXXEKALAYSCL 143 TIVQGLPID+ SRKKMDATA EL EK LAYSCL Sbjct: 298 TIVQGLPIDDDSRKKMDATAAELVEEKTLAYSCL 331
>MDHC2_ARATH (P57106) Malate dehydrogenase, cytoplasmic 2 (EC 1.1.1.37)| Length = 332 Score = 55.5 bits (132), Expect = 4e-08 Identities = 27/34 (79%), Positives = 29/34 (85%) Frame = -3 Query: 244 TIVQGLPIDEFSRKKMDATAQELXXEKALAYSCL 143 TIVQGLPID+ SRKKMD TA+EL EK LAYSCL Sbjct: 298 TIVQGLPIDDASRKKMDLTAEELKEEKDLAYSCL 331
>MDHC1_ARATH (P93819) Malate dehydrogenase, cytoplasmic 1 (EC 1.1.1.37)| Length = 332 Score = 55.5 bits (132), Expect = 4e-08 Identities = 27/34 (79%), Positives = 29/34 (85%) Frame = -3 Query: 244 TIVQGLPIDEFSRKKMDATAQELXXEKALAYSCL 143 +IVQGLPIDE SRKKMD TA+EL EK LAYSCL Sbjct: 298 SIVQGLPIDEVSRKKMDLTAEELKEEKDLAYSCL 331
>MDHC_BETVU (Q9SML8) Malate dehydrogenase, cytoplasmic (EC 1.1.1.37)| Length = 332 Score = 55.1 bits (131), Expect = 5e-08 Identities = 27/33 (81%), Positives = 28/33 (84%) Frame = -3 Query: 241 IVQGLPIDEFSRKKMDATAQELXXEKALAYSCL 143 IVQGLPIDE SR+KMDAT EL EKALAYSCL Sbjct: 299 IVQGLPIDEVSRQKMDATGAELVEEKALAYSCL 331
>MDHC_MEDSA (O48905) Malate dehydrogenase, cytoplasmic (EC 1.1.1.37)| Length = 332 Score = 52.0 bits (123), Expect = 4e-07 Identities = 25/33 (75%), Positives = 28/33 (84%) Frame = -3 Query: 241 IVQGLPIDEFSRKKMDATAQELXXEKALAYSCL 143 IVQGL IDEFSRKK+D TA+EL EK LA+SCL Sbjct: 299 IVQGLSIDEFSRKKLDLTAEELTEEKNLAHSCL 331
>MDHC_PIG (P11708) Malate dehydrogenase, cytoplasmic (EC 1.1.1.37) (Cytosolic| malate dehydrogenase) Length = 333 Score = 43.1 bits (100), Expect = 2e-04 Identities = 20/33 (60%), Positives = 26/33 (78%) Frame = -3 Query: 241 IVQGLPIDEFSRKKMDATAQELXXEKALAYSCL 143 IV+GLPI++FSR+KMD TA+EL EK A+ L Sbjct: 298 IVEGLPINDFSREKMDLTAKELAEEKETAFEFL 330
>MDHC_BOVIN (Q3T145) Malate dehydrogenase, cytoplasmic (EC 1.1.1.37) (Cytosolic| malate dehydrogenase) Length = 333 Score = 42.7 bits (99), Expect = 2e-04 Identities = 19/33 (57%), Positives = 26/33 (78%) Frame = -3 Query: 241 IVQGLPIDEFSRKKMDATAQELXXEKALAYSCL 143 +V+GLPI++FSR+KMD TA+EL EK A+ L Sbjct: 298 VVEGLPINDFSREKMDLTAKELAEEKETAFEFL 330
>MDHC_RAT (O88989) Malate dehydrogenase, cytoplasmic (EC 1.1.1.37) (Cytosolic| malate dehydrogenase) Length = 333 Score = 41.6 bits (96), Expect = 5e-04 Identities = 19/32 (59%), Positives = 25/32 (78%) Frame = -3 Query: 238 VQGLPIDEFSRKKMDATAQELXXEKALAYSCL 143 V+GLPI++FSR+KMD TA+EL EK A+ L Sbjct: 299 VEGLPINDFSREKMDLTAKELTEEKETAFEFL 330
>MDHC_MOUSE (P14152) Malate dehydrogenase, cytoplasmic (EC 1.1.1.37) (Cytosolic| malate dehydrogenase) Length = 333 Score = 41.6 bits (96), Expect = 5e-04 Identities = 19/32 (59%), Positives = 25/32 (78%) Frame = -3 Query: 238 VQGLPIDEFSRKKMDATAQELXXEKALAYSCL 143 V+GLPI++FSR+KMD TA+EL EK A+ L Sbjct: 299 VEGLPINDFSREKMDLTAKELTEEKETAFEFL 330
>MDHC_XENTR (Q6DIY9) Malate dehydrogenase, cytoplasmic (EC 1.1.1.37) (Cytosolic| malate dehydrogenase) Length = 334 Score = 41.2 bits (95), Expect = 7e-04 Identities = 20/33 (60%), Positives = 25/33 (75%) Frame = -3 Query: 241 IVQGLPIDEFSRKKMDATAQELXXEKALAYSCL 143 IV+GLPI++FSR+KMD TA+EL EK A L Sbjct: 299 IVEGLPINDFSREKMDLTAKELHEEKETALEFL 331
>MDHC_HUMAN (P40925) Malate dehydrogenase, cytoplasmic (EC 1.1.1.37) (Cytosolic| malate dehydrogenase) Length = 333 Score = 41.2 bits (95), Expect = 7e-04 Identities = 19/32 (59%), Positives = 25/32 (78%) Frame = -3 Query: 238 VQGLPIDEFSRKKMDATAQELXXEKALAYSCL 143 V+GLPI++FSR+KMD TA+EL EK A+ L Sbjct: 299 VEGLPINDFSREKMDLTAKELTEEKESAFEFL 330
>MDHC_CHICK (Q5ZME2) Malate dehydrogenase, cytoplasmic (EC 1.1.1.37) (Cytosolic| malate dehydrogenase) Length = 334 Score = 40.0 bits (92), Expect = 0.002 Identities = 19/32 (59%), Positives = 24/32 (75%) Frame = -3 Query: 238 VQGLPIDEFSRKKMDATAQELXXEKALAYSCL 143 V+GLPI++FSR+KMD TA+EL EK A L Sbjct: 300 VEGLPINDFSREKMDLTAKELTEEKETAVEFL 331
>MDHC_FELCA (Q7YRU4) Malate dehydrogenase, cytoplasmic (EC 1.1.1.37) (Cytosolic| malate dehydrogenase) Length = 333 Score = 39.7 bits (91), Expect = 0.002 Identities = 18/33 (54%), Positives = 25/33 (75%) Frame = -3 Query: 241 IVQGLPIDEFSRKKMDATAQELXXEKALAYSCL 143 +V+GL I++FSR+KMD TA+EL EK A+ L Sbjct: 298 VVEGLTINDFSREKMDLTAKELAEEKETAFEFL 330
>MDHC_XENLA (Q6PAB3) Malate dehydrogenase, cytoplasmic (EC 1.1.1.37) (Cytosolic| malate dehydrogenase) Length = 334 Score = 38.9 bits (89), Expect = 0.004 Identities = 19/33 (57%), Positives = 25/33 (75%) Frame = -3 Query: 241 IVQGLPIDEFSRKKMDATAQELXXEKALAYSCL 143 IV+GL I++FSR+KMD TA+EL EK A+ L Sbjct: 299 IVEGLCINDFSREKMDITAKELQDEKETAFEFL 331
>MDH_DEIRA (Q9RXI8) Malate dehydrogenase (EC 1.1.1.37)| Length = 330 Score = 38.5 bits (88), Expect = 0.005 Identities = 18/26 (69%), Positives = 21/26 (80%) Frame = -3 Query: 241 IVQGLPIDEFSRKKMDATAQELXXEK 164 IVQGL + +FSR KMDATAQEL E+ Sbjct: 295 IVQGLDVSDFSRGKMDATAQELEEER 320
>MDH_PROAC (Q6A6Z5) Malate dehydrogenase (EC 1.1.1.37)| Length = 327 Score = 37.4 bits (85), Expect = 0.010 Identities = 17/26 (65%), Positives = 22/26 (84%) Frame = -3 Query: 241 IVQGLPIDEFSRKKMDATAQELXXEK 164 IVQGL ID+FSR K+DA+A+EL E+ Sbjct: 293 IVQGLDIDDFSRAKIDASAKELADER 318
>MDH_ACIAD (Q6F7X1) Malate dehydrogenase (EC 1.1.1.37)| Length = 328 Score = 37.4 bits (85), Expect = 0.010 Identities = 17/26 (65%), Positives = 21/26 (80%) Frame = -3 Query: 238 VQGLPIDEFSRKKMDATAQELXXEKA 161 V+GL IDEFSR++MD T QEL E+A Sbjct: 296 VEGLEIDEFSRERMDKTLQELEEERA 321
>MDH_MYCPA (P61976) Malate dehydrogenase (EC 1.1.1.37)| Length = 329 Score = 37.0 bits (84), Expect = 0.014 Identities = 17/27 (62%), Positives = 20/27 (74%) Frame = -3 Query: 244 TIVQGLPIDEFSRKKMDATAQELXXEK 164 TIVQGL IDEFSR ++D T EL E+ Sbjct: 294 TIVQGLEIDEFSRSRIDKTTAELADER 320
>MDH_THETH (P10584) Malate dehydrogenase (EC 1.1.1.37)| Length = 327 Score = 35.0 bits (79), Expect = 0.051 Identities = 15/25 (60%), Positives = 21/25 (84%) Frame = -3 Query: 241 IVQGLPIDEFSRKKMDATAQELXXE 167 +V+GL I+EF+RK+M+ TAQEL E Sbjct: 293 VVEGLEINEFARKRMEITAQELLDE 317
>MDH_THET8 (Q5SKV7) Malate dehydrogenase (EC 1.1.1.37)| Length = 327 Score = 35.0 bits (79), Expect = 0.051 Identities = 15/25 (60%), Positives = 21/25 (84%) Frame = -3 Query: 241 IVQGLPIDEFSRKKMDATAQELXXE 167 +V+GL I+EF+RK+M+ TAQEL E Sbjct: 293 VVEGLEINEFARKRMEITAQELLDE 317
>MDH_THET2 (P61977) Malate dehydrogenase (EC 1.1.1.37)| Length = 327 Score = 35.0 bits (79), Expect = 0.051 Identities = 15/25 (60%), Positives = 21/25 (84%) Frame = -3 Query: 241 IVQGLPIDEFSRKKMDATAQELXXE 167 +V+GL I+EF+RK+M+ TAQEL E Sbjct: 293 VVEGLEINEFARKRMEITAQELLDE 317
>MDH_THEFY (Q47TT4) Malate dehydrogenase (EC 1.1.1.37)| Length = 330 Score = 34.3 bits (77), Expect = 0.088 Identities = 15/26 (57%), Positives = 22/26 (84%) Frame = -3 Query: 241 IVQGLPIDEFSRKKMDATAQELXXEK 164 IVQGL I+EFSR+++DA+ +EL E+ Sbjct: 295 IVQGLEINEFSRERIDASVRELEEER 320
>MDH_STRCO (Q9K3J3) Malate dehydrogenase (EC 1.1.1.37)| Length = 329 Score = 33.9 bits (76), Expect = 0.11 Identities = 15/26 (57%), Positives = 21/26 (80%) Frame = -3 Query: 241 IVQGLPIDEFSRKKMDATAQELXXEK 164 IVQGL I+EFSR ++DA+ +EL E+ Sbjct: 295 IVQGLDINEFSRARIDASVKELSEER 320
>MDH_AZOSE (Q5NYA9) Malate dehydrogenase (EC 1.1.1.37)| Length = 329 Score = 33.9 bits (76), Expect = 0.11 Identities = 16/34 (47%), Positives = 23/34 (67%) Frame = -3 Query: 241 IVQGLPIDEFSRKKMDATAQELXXEKALAYSCLE 140 I+QGL IDE+SR+K++ T EL E+A L+ Sbjct: 296 IIQGLEIDEYSREKINKTLGELEDERAAVADMLK 329
>MDH_STRAW (Q82HS2) Malate dehydrogenase (EC 1.1.1.37)| Length = 329 Score = 33.5 bits (75), Expect = 0.15 Identities = 15/26 (57%), Positives = 21/26 (80%) Frame = -3 Query: 241 IVQGLPIDEFSRKKMDATAQELXXEK 164 IVQGL I+EFSR ++DA+ +EL E+ Sbjct: 295 IVQGLEINEFSRARIDASVKELEEER 320
>MDH_MYCTU (P0A5J6) Malate dehydrogenase (EC 1.1.1.37)| Length = 329 Score = 33.1 bits (74), Expect = 0.20 Identities = 15/28 (53%), Positives = 20/28 (71%) Frame = -3 Query: 244 TIVQGLPIDEFSRKKMDATAQELXXEKA 161 TIV GL IDEFSR ++D + EL E++ Sbjct: 294 TIVSGLEIDEFSRGRIDKSTAELADERS 321
>MDH_MYCBO (P0A5J7) Malate dehydrogenase (EC 1.1.1.37)| Length = 329 Score = 33.1 bits (74), Expect = 0.20 Identities = 15/28 (53%), Positives = 20/28 (71%) Frame = -3 Query: 244 TIVQGLPIDEFSRKKMDATAQELXXEKA 161 TIV GL IDEFSR ++D + EL E++ Sbjct: 294 TIVSGLEIDEFSRGRIDKSTAELADERS 321
>MDH_XANAC (Q8PNP8) Malate dehydrogenase (EC 1.1.1.37)| Length = 328 Score = 33.1 bits (74), Expect = 0.20 Identities = 15/28 (53%), Positives = 21/28 (75%) Frame = -3 Query: 244 TIVQGLPIDEFSRKKMDATAQELXXEKA 161 TIV+ LPID+FS+K +D T EL E++ Sbjct: 294 TIVKDLPIDDFSQKYIDKTLAELEEERS 321
>MDH_DECAR (Q47C34) Malate dehydrogenase (EC 1.1.1.37)| Length = 328 Score = 32.7 bits (73), Expect = 0.26 Identities = 14/26 (53%), Positives = 21/26 (80%) Frame = -3 Query: 244 TIVQGLPIDEFSRKKMDATAQELXXE 167 +I+QGL IDE+SR+K++ T +EL E Sbjct: 295 SIIQGLEIDEYSREKINFTLKELTDE 320
>MDH_CHRVO (Q7NZ60) Malate dehydrogenase (EC 1.1.1.37)| Length = 326 Score = 32.7 bits (73), Expect = 0.26 Identities = 15/26 (57%), Positives = 19/26 (73%) Frame = -3 Query: 238 VQGLPIDEFSRKKMDATAQELXXEKA 161 V+GL ID FSR++MD T EL E+A Sbjct: 294 VEGLEIDAFSRERMDLTLAELEEERA 319
>MDH_BURPS (P80536) Malate dehydrogenase (EC 1.1.1.37)| Length = 326 Score = 32.7 bits (73), Expect = 0.26 Identities = 15/25 (60%), Positives = 18/25 (72%) Frame = -3 Query: 238 VQGLPIDEFSRKKMDATAQELXXEK 164 V+GL ID FSR+KMD T EL E+ Sbjct: 294 VEGLEIDAFSREKMDGTLAELLEER 318
>MDH_BURMA (Q62AG8) Malate dehydrogenase (EC 1.1.1.37)| Length = 327 Score = 32.7 bits (73), Expect = 0.26 Identities = 15/25 (60%), Positives = 18/25 (72%) Frame = -3 Query: 238 VQGLPIDEFSRKKMDATAQELXXEK 164 V+GL ID FSR+KMD T EL E+ Sbjct: 295 VEGLEIDAFSREKMDGTLAELLEER 319
>MDH_XANCP (Q8PC25) Malate dehydrogenase (EC 1.1.1.37)| Length = 328 Score = 32.3 bits (72), Expect = 0.33 Identities = 14/28 (50%), Positives = 21/28 (75%) Frame = -3 Query: 244 TIVQGLPIDEFSRKKMDATAQELXXEKA 161 T+V+ LPID+FS+K +D T EL E++ Sbjct: 294 TLVKDLPIDDFSQKYIDKTLAELEEERS 321
>MDH_XANC8 (Q4URH2) Malate dehydrogenase (EC 1.1.1.37)| Length = 328 Score = 32.3 bits (72), Expect = 0.33 Identities = 14/28 (50%), Positives = 21/28 (75%) Frame = -3 Query: 244 TIVQGLPIDEFSRKKMDATAQELXXEKA 161 T+V+ LPID+FS+K +D T EL E++ Sbjct: 294 TLVKDLPIDDFSQKYIDKTLAELEEERS 321
>MDH_CORGL (Q8NN33) Malate dehydrogenase (EC 1.1.1.37)| Length = 328 Score = 32.3 bits (72), Expect = 0.33 Identities = 14/26 (53%), Positives = 19/26 (73%) Frame = -3 Query: 241 IVQGLPIDEFSRKKMDATAQELXXEK 164 IV+GL I +F R ++DA AQEL E+ Sbjct: 296 IVEGLEISDFQRARIDANAQELQAER 321
>MDH_NOCFA (Q5YTI1) Malate dehydrogenase (EC 1.1.1.37)| Length = 334 Score = 32.3 bits (72), Expect = 0.33 Identities = 13/26 (50%), Positives = 20/26 (76%) Frame = -3 Query: 241 IVQGLPIDEFSRKKMDATAQELXXEK 164 IV+GL +D FSR+++DA+ EL E+ Sbjct: 298 IVEGLEVDAFSRERIDASVAELTAER 323
>MDH_MYCLE (P50917) Malate dehydrogenase (EC 1.1.1.37)| Length = 329 Score = 31.6 bits (70), Expect = 0.57 Identities = 14/27 (51%), Positives = 20/27 (74%) Frame = -3 Query: 244 TIVQGLPIDEFSRKKMDATAQELXXEK 164 TIV+GL ID+FSR ++D + EL E+ Sbjct: 294 TIVRGLGIDDFSRGRIDKSTAELADER 320
>MDH_METCA (Q60B71) Malate dehydrogenase (EC 1.1.1.37)| Length = 325 Score = 31.2 bits (69), Expect = 0.74 Identities = 14/28 (50%), Positives = 20/28 (71%) Frame = -3 Query: 241 IVQGLPIDEFSRKKMDATAQELXXEKAL 158 IVQ LP+D FSR+++ T EL E+A+ Sbjct: 293 IVQDLPLDTFSRERLRLTEVELLEERAM 320
>MDH_XANOR (Q5H496) Malate dehydrogenase (EC 1.1.1.37)| Length = 328 Score = 30.8 bits (68), Expect = 0.97 Identities = 13/28 (46%), Positives = 21/28 (75%) Frame = -3 Query: 244 TIVQGLPIDEFSRKKMDATAQELXXEKA 161 ++V+ LPID+FS+K +D T EL E++ Sbjct: 294 SLVKDLPIDDFSQKYIDKTLAELEEERS 321
>MDH_XYLFT (Q87E35) Malate dehydrogenase (EC 1.1.1.37)| Length = 328 Score = 29.6 bits (65), Expect = 2.2 Identities = 14/28 (50%), Positives = 19/28 (67%) Frame = -3 Query: 244 TIVQGLPIDEFSRKKMDATAQELXXEKA 161 +IV+ LPID FS+ +D T EL E+A Sbjct: 294 SIVKDLPIDTFSKTYIDKTLAELEEERA 321
>MDH_XYLFA (Q9PE17) Malate dehydrogenase (EC 1.1.1.37)| Length = 328 Score = 29.6 bits (65), Expect = 2.2 Identities = 14/28 (50%), Positives = 19/28 (67%) Frame = -3 Query: 244 TIVQGLPIDEFSRKKMDATAQELXXEKA 161 +IV+ LPID FS+ +D T EL E+A Sbjct: 294 SIVKDLPIDTFSKTYIDKTLAELEEERA 321
>MDH_CHLMU (Q9PK18) Malate dehydrogenase (EC 1.1.1.37)| Length = 326 Score = 28.1 bits (61), Expect = 6.3 Identities = 14/27 (51%), Positives = 16/27 (59%) Frame = -3 Query: 241 IVQGLPIDEFSRKKMDATAQELXXEKA 161 IV GLP D F R KM + E+ EKA Sbjct: 296 IVPGLPWDAFIRGKMQISLDEILQEKA 322 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 29,426,858 Number of Sequences: 219361 Number of extensions: 422078 Number of successful extensions: 1159 Number of sequences better than 10.0: 44 Number of HSP's better than 10.0 without gapping: 1145 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1159 length of database: 80,573,946 effective HSP length: 57 effective length of database: 68,070,369 effective search space used: 1633688856 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
