ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal17l21
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1K0196_MOUSE (Q8C2E7) Protein KIAA0196 32 1.3
2K0196_HUMAN (Q12768) Protein KIAA0196 31 2.9

>K0196_MOUSE (Q8C2E7) Protein KIAA0196|
          Length = 1159

 Score = 32.0 bits (71), Expect = 1.3
 Identities = 22/64 (34%), Positives = 33/64 (51%)
 Frame = -1

Query: 241 TRSFMRGLIRTAVINIHMEIVRTVDISVLQTYEDHHAIAIWLVADKLTSIQTESINIRRS 62
           TR F+  +IRT  INI  E++ TV I    ++        W + D  TSI  ESI +  S
Sbjct: 527 TRKFLHQMIRT--INIKEEVLITVQIIGDLSFA-------WQLIDSFTSIMQESIRVNPS 577

Query: 61  VLVQ 50
           ++ +
Sbjct: 578 MVTK 581



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>K0196_HUMAN (Q12768) Protein KIAA0196|
          Length = 1159

 Score = 30.8 bits (68), Expect = 2.9
 Identities = 21/64 (32%), Positives = 33/64 (51%)
 Frame = -1

Query: 241 TRSFMRGLIRTAVINIHMEIVRTVDISVLQTYEDHHAIAIWLVADKLTSIQTESINIRRS 62
           TR F+  +IRT  INI  E++ T+ I    ++        W + D  TSI  ESI +  S
Sbjct: 527 TRKFLHQMIRT--INIKEEVLITMQIVGDLSFA-------WQLIDSFTSIMQESIRVNPS 577

Query: 61  VLVQ 50
           ++ +
Sbjct: 578 MVTK 581


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 78,664,522
Number of Sequences: 219361
Number of extensions: 1476804
Number of successful extensions: 3507
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 3438
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3507
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4929664480
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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