ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal18a18
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1BGAL_ASPOF (P45582) Beta-galactosidase precursor (EC 3.2.1.23) (... 159 6e-39
2BGAL_LYCES (P48980) Beta-galactosidase precursor (EC 3.2.1.23) (... 152 7e-37
3BGAL_BRAOL (P49676) Beta-galactosidase precursor (EC 3.2.1.23) (... 137 3e-32
4BGAL_DIACA (Q00662) Putative beta-galactosidase precursor (EC 3.... 98 2e-20
5BGAL_MALDO (P48981) Beta-galactosidase precursor (EC 3.2.1.23) (... 94 4e-19
6LEG_ANTCR (P22031) D-galactoside-specific lectin (Sea urchin egg... 32 1.8
7SUSY_SOYBN (P13708) Sucrose synthase (EC 2.4.1.13) (Sucrose-UDP ... 32 2.4
8EMF2_ARATH (Q8L6Y4) Polycomb protein EMBRYONIC FLOWER 2 31 3.1
9BGAL_MOUSE (P23780) Beta-galactosidase precursor (EC 3.2.1.23) (... 31 4.1
10KI2L4_HUMAN (Q99706) Killer cell immunoglobulin-like receptor 2D... 31 4.1
11SUS2_ORYSA (P31924) Sucrose synthase 2 (EC 2.4.1.13) (Sucrose-UD... 30 5.3
12SUS1_ARATH (P49040) Sucrose synthase (EC 2.4.1.13) (Sucrose-UDP ... 30 5.3

>BGAL_ASPOF (P45582) Beta-galactosidase precursor (EC 3.2.1.23) (Lactase)|
          Length = 832

 Score =  159 bits (403), Expect = 6e-39
 Identities = 87/199 (43%), Positives = 112/199 (56%), Gaps = 6/199 (3%)
 Frame = -3

Query: 683  WVNGQSIGRYWPTNIAPQSGCVNSCNYRGSYSATKCLKKCGQPSQILYHVPRSFLQPGSN 504
            W+NGQSIGRYWP   A  SG   SC+YRG+Y+  KCL  CG+ SQ  YHVPRS+L P  N
Sbjct: 641  WINGQSIGRYWPAYKA--SGSCGSCDYRGTYNEKKCLSNCGEASQRWYHVPRSWLIPTGN 698

Query: 503  DIVLFEQFGGNPSKISFTTKQTESVCAHVSEDHPDQIDSWVSSQQKLQRSGPALRLECPK 324
             +V+ E++GG+P+ IS   +   SVCA V E  P  +D+W +         P + L C  
Sbjct: 699  FLVVLEEWGGDPTGISMVKRSVASVCAEVEELQP-TMDNWRTKAY----GRPKVHLSC-D 752

Query: 323  EGQVISSIKFASFGTPSGTCGSYSHGECSSSQALAVAQEAXXXXXXXXXXXSAKNF---- 156
             GQ +S IKFASFGTP GTCGS+S G C + ++    ++             + N     
Sbjct: 753  PGQKMSKIKFASFGTPQGTCGSFSEGSCHAHKSYDAFEQEGLMQNCVGQEFCSVNVAPEV 812

Query: 155  --GDPCRGVTKSLVVEAAC 105
              GDPC G  K L VEA C
Sbjct: 813  FGGDPCPGTMKKLAVEAIC 831



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>BGAL_LYCES (P48980) Beta-galactosidase precursor (EC 3.2.1.23) (Lactase) (Acid|
            beta-galactosidase) (Exo-(1-->4)-beta-D-galactanase)
          Length = 835

 Score =  152 bits (385), Expect = 7e-37
 Identities = 83/196 (42%), Positives = 111/196 (56%), Gaps = 2/196 (1%)
 Frame = -3

Query: 683  WVNGQSIGRYWPTNIAPQSGCVNSCNYRGSYSATKCLKKCGQPSQILYHVPRSFLQPGSN 504
            W+NGQS+GR+WP      SG  + CNY G +   KCL  CG+ SQ  YHVPRS+L P  N
Sbjct: 643  WINGQSLGRHWPAY--KSSGSCSVCNYTGWFDEKKCLTNCGEGSQRWYHVPRSWLYPTGN 700

Query: 503  DIVLFEQFGGNPSKISFTTKQTESVCAHVSEDHPDQIDSWVSSQQKLQRS-GPALRLECP 327
             +V+FE++GG+P  I+   ++  SVCA + E  P  ++       K  R   P   L+C 
Sbjct: 701  LLVVFEEWGGDPYGITLVKREIGSVCADIYEWQPQLLNWQRLVSGKFDRPLRPKAHLKC- 759

Query: 326  KEGQVISSIKFASFGTPSGTCGSYSHGECSSSQALAVAQEAXXXXXXXXXXXSAKNF-GD 150
              GQ ISSIKFASFGTP G CG++  G C + ++    ++            + +NF GD
Sbjct: 760  APGQKISSIKFASFGTPEGVCGNFQQGSCHAPRSYDAFKKNCVGKESCSVQVTPENFGGD 819

Query: 149  PCRGVTKSLVVEAACS 102
            PCR V K L VEA CS
Sbjct: 820  PCRNVLKKLSVEAICS 835



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>BGAL_BRAOL (P49676) Beta-galactosidase precursor (EC 3.2.1.23) (Lactase)|
          Length = 828

 Score =  137 bits (345), Expect = 3e-32
 Identities = 77/197 (39%), Positives = 100/197 (50%), Gaps = 4/197 (2%)
 Frame = -3

Query: 683  WVNGQSIGRYWPTNIAPQSGCVNSCNYRGSYSATKCLKKCGQPSQILYHVPRSFL-QPGS 507
            W+NGQSIGRYWP+  +   GC   C+YRG Y + KC   CG+P+Q  YHVPRSFL   G 
Sbjct: 653  WINGQSIGRYWPSFNSSDEGCTEECDYRGEYGSDKCAFMCGKPTQRWYHVPRSFLNDKGH 712

Query: 506  NDIVLFEQFGGNPSKISFTTKQTESVCAHVSEDHPDQIDSWVSSQQKLQRSGPALRLECP 327
            N I LFE+ GG+PS + F T  T  VCA   E +                     ++E  
Sbjct: 713  NTITLFEEMGGDPSMVKFKTVVTGRVCAKAHEHN---------------------KVELS 751

Query: 326  KEGQVISSIKFASFGTPSGTCGSYSHGECSSSQ-ALAVAQEAXXXXXXXXXXXSAKNFGD 150
               + IS++KFASFG PSG CGS++ G C  ++ A+ V  +            S+  FG 
Sbjct: 752  CNNRPISAVKFASFGNPSGQCGSFAAGSCEGAKDAVKVVAKECVGKLNCTMNVSSHKFGS 811

Query: 149  --PCRGVTKSLVVEAAC 105
               C    K L VE  C
Sbjct: 812  NLDCGDSPKRLFVEVEC 828



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>BGAL_DIACA (Q00662) Putative beta-galactosidase precursor (EC 3.2.1.23)|
           (Lactase) (SR12 protein)
          Length = 731

 Score = 98.2 bits (243), Expect = 2e-20
 Identities = 44/81 (54%), Positives = 59/81 (72%)
 Frame = -3

Query: 686 AWVNGQSIGRYWPTNIAPQSGCVNSCNYRGSYSATKCLKKCGQPSQILYHVPRSFLQPGS 507
           AW+NGQSIGR+W  NIA  S C ++CNY G+Y+ TKCL  CG+ SQ  YHVPRS+LQP  
Sbjct: 649 AWINGQSIGRHWSNNIAKGS-CNDNCNYAGTYTETKCLSDCGKSSQKWYHVPRSWLQPRG 707

Query: 506 NDIVLFEQFGGNPSKISFTTK 444
           N +V+FE++GG+   +S   +
Sbjct: 708 NLLVVFEEWGGDTKWVSLVKR 728



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>BGAL_MALDO (P48981) Beta-galactosidase precursor (EC 3.2.1.23) (Lactase) (Acid|
           beta-galactosidase) (Exo-(1-->4)-beta-D-galactanase)
          Length = 731

 Score = 94.0 bits (232), Expect = 4e-19
 Identities = 41/82 (50%), Positives = 56/82 (68%)
 Frame = -3

Query: 683 WVNGQSIGRYWPTNIAPQSGCVNSCNYRGSYSATKCLKKCGQPSQILYHVPRSFLQPGSN 504
           W+NGQS+GR+WP  IA   G    C+Y G+Y   KC   CG+PSQ  YH+PRS+L P  N
Sbjct: 645 WINGQSVGRHWPGYIA--RGSCGDCSYAGTYDDKKCRTHCGEPSQRWYHIPRSWLTPTGN 702

Query: 503 DIVLFEQFGGNPSKISFTTKQT 438
            +V+FE++GG+PS+IS   + T
Sbjct: 703 LLVVFEEWGGDPSRISLVERGT 724



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>LEG_ANTCR (P22031) D-galactoside-specific lectin (Sea urchin egg lectin)|
           (SUEL)
          Length = 105

 Score = 32.0 bits (71), Expect = 1.8
 Identities = 27/89 (30%), Positives = 38/89 (42%), Gaps = 7/89 (7%)
 Frame = -3

Query: 347 ALRLECPK-EGQVISSIKFASFGTPSGTC-----GSYSHG-ECSSSQALAVAQEAXXXXX 189
           +L + CP+ EG VI     A +G   G       G+++   +C SS +  V + +     
Sbjct: 18  SLTISCPEGEGIVIYD---AIYGRKRGEVCPGLFGAFTKNRKCRSSNSQQVVENSCEGKS 74

Query: 188 XXXXXXSAKNFGDPCRGVTKSLVVEAACS 102
                 S   FGDPC G  K L V   CS
Sbjct: 75  SCTVLASNSVFGDPCPGTAKYLAVTYICS 103



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>SUSY_SOYBN (P13708) Sucrose synthase (EC 2.4.1.13) (Sucrose-UDP|
           glucosyltransferase) (Nodulin-100)
          Length = 805

 Score = 31.6 bits (70), Expect = 2.4
 Identities = 16/57 (28%), Positives = 25/57 (43%), Gaps = 3/57 (5%)
 Frame = -3

Query: 386 WVSSQQKLQRSGPALRLECPKEGQVISSIKFASFG---TPSGTCGSYSHGECSSSQA 225
           W+SSQ    R+G   R+ C   G  +    + +FG     + TCG  +   C+   A
Sbjct: 642 WISSQMNRVRNGELYRVICDTRGAFVQPAVYEAFGLTVVEAMTCGLPTFATCNGGPA 698



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>EMF2_ARATH (Q8L6Y4) Polycomb protein EMBRYONIC FLOWER 2|
          Length = 631

 Score = 31.2 bits (69), Expect = 3.1
 Identities = 27/100 (27%), Positives = 44/100 (44%), Gaps = 12/100 (12%)
 Frame = -3

Query: 593 YSATKCLKKCGQPSQILYHVPRSFLQPGSNDIVLFEQFGGNPSKISFTTKQTESVCAHVS 414
           +S   CL KC     + YH+      P ++D++ FE +     +    + +TE++ + V+
Sbjct: 324 FSCPFCLVKCASFKGLRYHL------PSTHDLLNFEFWVTEEFQAVNVSLKTETMISKVN 377

Query: 413 ED--HPDQIDSWVS----------SQQKLQRSGPALRLEC 330
           ED   P Q   + S          SQ +  R GP L L C
Sbjct: 378 EDDVDPKQQTFFFSSKKFRRRRQKSQVRSSRQGPHLGLGC 417



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>BGAL_MOUSE (P23780) Beta-galactosidase precursor (EC 3.2.1.23) (Lactase) (Acid|
           beta-galactosidase)
          Length = 647

 Score = 30.8 bits (68), Expect = 4.1
 Identities = 11/18 (61%), Positives = 15/18 (83%)
 Frame = -3

Query: 683 WVNGQSIGRYWPTNIAPQ 630
           W+NG ++GRYWPT + PQ
Sbjct: 584 WINGFNLGRYWPT-MGPQ 600



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>KI2L4_HUMAN (Q99706) Killer cell immunoglobulin-like receptor 2DL4 precursor|
           (MHC class I NK cell receptor KIR103AS) (Killer cell
           inhibitory receptor 103AS) (KIR-103AS) (G9P) (CD158d
           antigen)
          Length = 377

 Score = 30.8 bits (68), Expect = 4.1
 Identities = 15/40 (37%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
 Frame = -3

Query: 653 WPTNIAPQSGCVN-SCNYRGSYSATKCLKKCGQPSQILYH 537
           WP+ + PQ G V   C+YR  ++     KK G P   LY+
Sbjct: 36  WPSAVVPQGGHVTLRCHYRRGFNIFTLYKKDGVPVPELYN 75



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>SUS2_ORYSA (P31924) Sucrose synthase 2 (EC 2.4.1.13) (Sucrose-UDP|
           glucosyltransferase 2)
          Length = 816

 Score = 30.4 bits (67), Expect = 5.3
 Identities = 19/75 (25%), Positives = 33/75 (44%), Gaps = 3/75 (4%)
 Frame = -3

Query: 476 GNPSKISFTTKQTESVCAHVSEDHPDQIDSWVSSQQKLQRSGPALRLECPKEGQVISSIK 297
           GNPSK      + + +   + + + +    W+S+Q    R+G   R  C  +G  +    
Sbjct: 617 GNPSKDKEEQAEFKKMFDLIEQYNLNGHIRWISAQMNRVRNGELYRYICDTKGAFVQPAF 676

Query: 296 FASFG---TPSGTCG 261
           + +FG     S TCG
Sbjct: 677 YEAFGLTVVESMTCG 691



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>SUS1_ARATH (P49040) Sucrose synthase (EC 2.4.1.13) (Sucrose-UDP|
           glucosyltransferase)
          Length = 806

 Score = 30.4 bits (67), Expect = 5.3
 Identities = 16/57 (28%), Positives = 24/57 (42%), Gaps = 3/57 (5%)
 Frame = -3

Query: 386 WVSSQQKLQRSGPALRLECPKEGQVISSIKFASFG---TPSGTCGSYSHGECSSSQA 225
           W+SSQ    R+G   R  C  +G  +    + +FG     + TCG  +   C    A
Sbjct: 644 WISSQMDRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPA 700


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 108,519,067
Number of Sequences: 219361
Number of extensions: 2352687
Number of successful extensions: 7038
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 6685
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7025
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6825954960
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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