| Clone Name | rbaal18a13 |
|---|---|
| Clone Library Name | barley_pub |
>gb|U87163.1|TAU87163 Triticum aestivum eIF-2 beta subunit mRNA, complete cds Length = 1154 Score = 898 bits (453), Expect = 0.0 Identities = 471/477 (98%) Strand = Plus / Minus Query: 150 ttaagttccagccttccgacgcccaacttgcgccacaaatccagccttgataggagcaac 209 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 928 ttaagttccagccttccgacgcccaacttgcgccacgaatccagccttgataggagcaac 869 Query: 210 tgaccttgacgaaccacattgttcacaacgaaggaagaacaaccgattctccttggaaag 269 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 868 tgaccttgacgaaccacattgttcacaacgaaggaagaacaaccgattctccttggaaag 809 Query: 270 gatggtatctgggctcttacatccattacatatgacatattcattgatgtatctcctgag 329 |||||||||||||||||| ||||||| ||||||||||||||||||||| ||||||||||| Sbjct: 808 gatggtatctgggctcttgcatccatgacatatgacatattcattgatatatctcctgag 749 Query: 330 tatagcttcaaagttcttcggggcaaatcttcctttgataactaacctttgttgcccatc 389 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 748 tatagcttcaaagttcttcggggcaaatcttcctttgataaccaacctttgttgcccatc 689 Query: 390 aagggatccacttgttcccatctcagcaagtaaaaacatcatcacatgttcaggttgcct 449 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 688 aagggatccacttgttcccatctcagcaagtaaaaacatcatcacatgttcaggttgcct 629 Query: 450 atgcattgttttgcacaagtccatgaagttcacaaaaactgtcttctttgtgccttccct 509 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 628 atgcattgttttgcacaagtccatgaagttcacaaaaactgtcttctttgtgccttccct 569 Query: 510 aagaacttgaggaggccgcataactgttcttcgtctatcaccagcaagatctggattatt 569 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 568 aagaacttgaggaggccgcataactgttcttcgtctatcaccagcaagatctggattatt 509 Query: 570 ctcacgcaggatattgaagactctgccaagcagctcatcgtatttgtaatctctatc 626 ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 508 ctcacgcaggatattgaagactctgccaagcagctcatcatatttgtaatctctatc 452 Score = 125 bits (63), Expect = 2e-25 Identities = 100/111 (90%), Gaps = 1/111 (0%) Strand = Plus / Minus Query: 37 attcatagtacacgaaataacaaaaaccacaaggcggtctaggcacagtataagctggac 96 |||||||||||| ||| |||||||| |||||| |||||||||||||||| || | |||| Sbjct: 1057 attcatagtacaggaagtaacaaaatccacaaagcggtctaggcacagtgaaaacaggac 998 Query: 97 aataaagattgtttgtaaatcggcaaattgttggattacgttgacagagca 147 ||||||||||| |||||||||||||||||| ||||||||||||| |||||| Sbjct: 997 aataaagattg-ttgtaaatcggcaaattgctggattacgttgatagagca 948
>dbj|AK073228.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033023N08, full insert sequence Length = 1221 Score = 656 bits (331), Expect = 0.0 Identities = 439/475 (92%) Strand = Plus / Minus Query: 149 cttaagttccagccttccgacgcccaacttgcgccacaaatccagccttgataggagcaa 208 |||| ||||||||||||||||| |||||||| || || |||||||||||||||||||||| Sbjct: 1022 cttaggttccagccttccgacgaccaacttgggcaacgaatccagccttgataggagcaa 963 Query: 209 ctgaccttgacgaaccacattgttcacaacgaaggaagaacaaccgattctccttggaaa 268 | || ||||| |||||||| ||||| ||||||||||||||||||| ||||||||| |||| Sbjct: 962 cagatcttgaagaaccacactgttcgcaacgaaggaagaacaacctattctccttagaaa 903 Query: 269 ggatggtatctgggctcttacatccattacatatgacatattcattgatgtatctcctga 328 |||||||||| || ||||| || ||||| ||||||||||| |||||||| |||||||| | Sbjct: 902 ggatggtatcaggactcttgcacccattgcatatgacatactcattgatatatctcctaa 843 Query: 329 gtatagcttcaaagttcttcggggcaaatcttcctttgataactaacctttgttgcccat 388 |||| ||||||||||| || || |||||||||||||| ||||| || ||||||||||||| Sbjct: 842 gtatggcttcaaagtttttaggagcaaatcttccttttataaccaatctttgttgcccat 783 Query: 389 caagggatccacttgttcccatctcagcaagtaaaaacatcatcacatgttcaggttgcc 448 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 782 caagggatccacttgttcccatctcagcaagtaaaaacatcatcacatgttcaggttgcc 723 Query: 449 tatgcattgttttgcacaagtccatgaagttcacaaaaactgtcttctttgtgccttccc 508 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 722 tatgcattgttttgcacaaatccatgaagttcacaaaaactgtcttctttgtgccttccc 663 Query: 509 taagaacttgaggaggccgcataactgttcttcgtctatcaccagcaagatctggattat 568 |||||||||||||||||| |||||| |||||||||||||||||||||||||| ||||||| Sbjct: 662 taagaacttgaggaggcctcataacagttcttcgtctatcaccagcaagatcaggattat 603 Query: 569 tctcacgcaggatattgaagactctgccaagcagctcatcgtatttgtaatctct 623 |||||||||||||||| || ||||||||||||||||| || ||||| |||||||| Sbjct: 602 tctcacgcaggatattaaatactctgccaagcagctcttcatatttataatctct 548
>gb|AY103698.1| Zea mays PCO083605 mRNA sequence Length = 1319 Score = 406 bits (205), Expect = e-110 Identities = 397/461 (86%) Strand = Plus / Minus Query: 160 gccttccgacgcccaacttgcgccacaaatccagccttgataggagcaactgaccttgac 219 ||||||||||| || ||||| || || |||||||| ||||| |||||||| |||||||| Sbjct: 911 gccttccgacgaccgacttgagcaacgaatccagctttgattggagcaacggaccttgaa 852 Query: 220 gaaccacattgttcacaacgaaggaagaacaaccgattctccttggaaaggatggtatct 279 || ||||| ||||| || ||||||||||||| ||||| |||||||| || |||||||| Sbjct: 851 gatccacactgttcgcagcgaaggaagaacagacgattttccttggacagaatggtatca 792 Query: 280 gggctcttacatccattacatatgacatattcattgatgtatctcctgagtatagcttca 339 |||||||| |||||||| || ||||| || ||||||||||||||||| || || |||||| Sbjct: 791 gggctcttgcatccattgcagatgacgtactcattgatgtatctcctcaggattgcttca 732 Query: 340 aagttcttcggggcaaatcttcctttgataactaacctttgttgcccatcaagggatcca 399 ||||| || |||||||||||||||||||| || |||||||| ||||||||||| || || Sbjct: 731 aagtttttgggggcaaatcttcctttgatcaccaacctttgctgcccatcaagtgacccg 672 Query: 400 cttgttcccatctcagcaagtaaaaacatcatcacatgttcaggttgcctatgcattgtt 459 ||||||||||| |||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 671 cttgttcccatttcagcaagtaaaaacatcatcacatgctcaggttgcctatgcatcgtt 612 Query: 460 ttgcacaagtccatgaagttcacaaaaactgtcttctttgtgccttccctaagaacttga 519 || ||||| ||||| ||||| |||||||||||||||||||| || |||||||||||||| Sbjct: 611 ttacacaaatccataaagttaacaaaaactgtcttctttgttccctccctaagaacttgt 552 Query: 520 ggaggccgcataactgttcttcgtctatcaccagcaagatctggattattctcacgcagg 579 || |||| |||||| || || || ||||| |||||||||||||| || |||||||| || Sbjct: 551 ggtggcctcataacggtcctacgcctatccccagcaagatctgggttgttctcacgtaga 492 Query: 580 atattgaagactctgccaagcagctcatcgtatttgtaatc 620 || ||||| || ||| | |||||||| || ||||| ||||| Sbjct: 491 atgttgaacaccctgtccagcagctcttcatatttataatc 451
>ref|XM_479549.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1271 Score = 402 bits (203), Expect = e-109 Identities = 401/467 (85%) Strand = Plus / Minus Query: 160 gccttccgacgcccaacttgcgccacaaatccagccttgataggagcaactgaccttgac 219 |||||||| || |||||||| || ||||||||||||||||| |||||||| ||||| ||| Sbjct: 983 gccttccgccgaccaacttgtgcgacaaatccagccttgattggagcaacagacctcgac 924 Query: 220 gaaccacattgttcacaacgaaggaagaacaaccgattctccttggaaaggatggtatct 279 || ||||| ||||| || ||||||||||||| ||||| |||||||| || |||||||| Sbjct: 923 gatccacactgttcgcagcgaaggaagaacagacgattttccttggatagaatggtatca 864 Query: 280 gggctcttacatccattacatatgacatattcattgatgtatctcctgagtatagcttca 339 ||||| || || ||||| || ||||| || |||||||| ||||||| || || ||||| Sbjct: 863 gggcttttgcaaccattgcaaatgacgtactcattgatatatctccgcaggattgcttcg 804 Query: 340 aagttcttcggggcaaatcttcctttgataactaacctttgttgcccatcaagggatcca 399 ||||| ||||| ||||||||||||||||| || |||||||| ||||||||||| |||||| Sbjct: 803 aagtttttcggagcaaatcttcctttgatcaccaacctttgctgcccatcaagtgatcca 744 Query: 400 cttgttcccatctcagcaagtaaaaacatcatcacatgttcaggttgcctatgcattgtt 459 ||||| ||||| |||||||| ||||||||||||||||| ||||||||||||||||| ||| Sbjct: 743 cttgtccccatttcagcaagcaaaaacatcatcacatgctcaggttgcctatgcatcgtt 684 Query: 460 ttgcacaagtccatgaagttcacaaaaactgtcttctttgtgccttccctaagaacttga 519 |||||||||||||| || |||||||||||||||||||| ||||| || | |||||| || Sbjct: 683 ttgcacaagtccataaaattcacaaaaactgtcttcttcgtgccctctcgaagaacctgt 624 Query: 520 ggaggccgcataactgttcttcgtctatcaccagcaagatctggattattctcacgcagg 579 || |||| ||| || ||||| ||||| || ||||||||||||||||| || |||||||| Sbjct: 623 ggcggcctcatgacagttctgcgtctgtctccagcaagatctggattgttttcacgcaga 564 Query: 580 atattgaagactctgccaagcagctcatcgtatttgtaatctctatc 626 |||||||| |||||||| || |||||||| || ||||| || ||||| Sbjct: 563 atattgaacactctgcccagaagctcatcataattgtagtccctatc 517
>dbj|AK066982.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013093I07, full insert sequence Length = 1270 Score = 394 bits (199), Expect = e-106 Identities = 400/467 (85%) Strand = Plus / Minus Query: 160 gccttccgacgcccaacttgcgccacaaatccagccttgataggagcaactgaccttgac 219 |||||||| || |||||||| || ||||||||||||||||| |||||||| ||||| ||| Sbjct: 982 gccttccgccgaccaacttgtgcgacaaatccagccttgattggagcaacagacctcgac 923 Query: 220 gaaccacattgttcacaacgaaggaagaacaaccgattctccttggaaaggatggtatct 279 || ||||| ||||| || ||||||||||||| ||||| |||||||| || |||||||| Sbjct: 922 gatccacactgttcgcagcgaaggaagaacagacgattttccttggatagaatggtatca 863 Query: 280 gggctcttacatccattacatatgacatattcattgatgtatctcctgagtatagcttca 339 ||||| || || ||||| || ||||| || |||||||| ||||||| || || ||||| Sbjct: 862 gggcttttgcaaccattgcaaatgacgtactcattgatatatctccgcaggattgcttcg 803 Query: 340 aagttcttcggggcaaatcttcctttgataactaacctttgttgcccatcaagggatcca 399 ||||| ||||| ||||||||||||||||| || |||||||| ||||||||||| |||||| Sbjct: 802 aagtttttcggagcaaatcttcctttgatcaccaacctttgctgcccatcaagtgatcca 743 Query: 400 cttgttcccatctcagcaagtaaaaacatcatcacatgttcaggttgcctatgcattgtt 459 ||||| ||||| | |||||| ||||||||||||||||| ||||||||||||||||| ||| Sbjct: 742 cttgtccccattttagcaagcaaaaacatcatcacatgctcaggttgcctatgcatcgtt 683 Query: 460 ttgcacaagtccatgaagttcacaaaaactgtcttctttgtgccttccctaagaacttga 519 |||||||||||||| || |||||||||||||||||||| ||||| || | |||||| || Sbjct: 682 ttgcacaagtccataaaattcacaaaaactgtcttcttcgtgccctctcgaagaacctgt 623 Query: 520 ggaggccgcataactgttcttcgtctatcaccagcaagatctggattattctcacgcagg 579 || |||| ||| || ||||| ||||| || ||||||||||||||||| || |||||||| Sbjct: 622 ggcggcctcatgacagttctgcgtctgtctccagcaagatctggattgttttcacgcaga 563 Query: 580 atattgaagactctgccaagcagctcatcgtatttgtaatctctatc 626 |||||||| |||||||| || |||||||| || ||||| || ||||| Sbjct: 562 atattgaacactctgcccagaagctcatcataattgtagtccctatc 516
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 246 bits (124), Expect = 7e-62 Identities = 142/148 (95%) Strand = Plus / Minus Query: 457 gttttgcacaagtccatgaagttcacaaaaactgtcttctttgtgccttccctaagaact 516 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12291273 gttttgcacaaatccatgaagttcacaaaaactgtcttctttgtgccttccctaagaact 12291214 Query: 517 tgaggaggccgcataactgttcttcgtctatcaccagcaagatctggattattctcacgc 576 |||||||||| |||||| |||||||||||||||||||||||||| ||||||||||||||| Sbjct: 12291213 tgaggaggcctcataacagttcttcgtctatcaccagcaagatcaggattattctcacgc 12291154 Query: 577 aggatattgaagactctgccaagcagct 604 |||||||| || |||||||||||||||| Sbjct: 12291153 aggatattaaatactctgccaagcagct 12291126 Score = 212 bits (107), Expect = 1e-51 Identities = 134/143 (93%) Strand = Plus / Minus Query: 314 tgatgtatctcctgagtatagcttcaaagttcttcggggcaaatcttcctttgataacta 373 |||| |||||||| ||||| ||||||||||| || || |||||||||||||| ||||| | Sbjct: 12291524 tgatatatctcctaagtatggcttcaaagtttttaggagcaaatcttccttttataacca 12291465 Query: 374 acctttgttgcccatcaagggatccacttgttcccatctcagcaagtaaaaacatcatca 433 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12291464 atctttgttgcccatcaagggatccacttgttcccatctcagcaagtaaaaacatcatca 12291405 Query: 434 catgttcaggttgcctatgcatt 456 ||||||||||||||||||||||| Sbjct: 12291404 catgttcaggttgcctatgcatt 12291382 Score = 97.6 bits (49), Expect = 4e-17 Identities = 76/85 (89%) Strand = Plus / Minus Query: 229 tgttcacaacgaaggaagaacaaccgattctccttggaaaggatggtatctgggctctta 288 ||||| ||||||||||||||||||| ||||||||| |||||||||||||| || ||||| Sbjct: 12292173 tgttcgcaacgaaggaagaacaacctattctccttagaaaggatggtatcaggactcttg 12292114 Query: 289 catccattacatatgacatattcat 313 || ||||| ||||||||||| |||| Sbjct: 12292113 cacccattgcatatgacatactcat 12292089 Score = 93.7 bits (47), Expect = 7e-16 Identities = 71/79 (89%) Strand = Plus / Minus Query: 149 cttaagttccagccttccgacgcccaacttgcgccacaaatccagccttgataggagcaa 208 |||| ||||||||||||||||| |||||||| || || |||||||||||||||||||||| Sbjct: 12293602 cttaggttccagccttccgacgaccaacttgggcaacgaatccagccttgataggagcaa 12293543 Query: 209 ctgaccttgacgaaccaca 227 | || ||||| |||||||| Sbjct: 12293542 cagatcttgaagaaccaca 12293524
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 246 bits (124), Expect = 7e-62 Identities = 142/148 (95%) Strand = Plus / Minus Query: 457 gttttgcacaagtccatgaagttcacaaaaactgtcttctttgtgccttccctaagaact 516 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12288036 gttttgcacaaatccatgaagttcacaaaaactgtcttctttgtgccttccctaagaact 12287977 Query: 517 tgaggaggccgcataactgttcttcgtctatcaccagcaagatctggattattctcacgc 576 |||||||||| |||||| |||||||||||||||||||||||||| ||||||||||||||| Sbjct: 12287976 tgaggaggcctcataacagttcttcgtctatcaccagcaagatcaggattattctcacgc 12287917 Query: 577 aggatattgaagactctgccaagcagct 604 |||||||| || |||||||||||||||| Sbjct: 12287916 aggatattaaatactctgccaagcagct 12287889 Score = 212 bits (107), Expect = 1e-51 Identities = 134/143 (93%) Strand = Plus / Minus Query: 314 tgatgtatctcctgagtatagcttcaaagttcttcggggcaaatcttcctttgataacta 373 |||| |||||||| ||||| ||||||||||| || || |||||||||||||| ||||| | Sbjct: 12288287 tgatatatctcctaagtatggcttcaaagtttttaggagcaaatcttccttttataacca 12288228 Query: 374 acctttgttgcccatcaagggatccacttgttcccatctcagcaagtaaaaacatcatca 433 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12288227 atctttgttgcccatcaagggatccacttgttcccatctcagcaagtaaaaacatcatca 12288168 Query: 434 catgttcaggttgcctatgcatt 456 ||||||||||||||||||||||| Sbjct: 12288167 catgttcaggttgcctatgcatt 12288145 Score = 97.6 bits (49), Expect = 4e-17 Identities = 76/85 (89%) Strand = Plus / Minus Query: 229 tgttcacaacgaaggaagaacaaccgattctccttggaaaggatggtatctgggctctta 288 ||||| ||||||||||||||||||| ||||||||| |||||||||||||| || ||||| Sbjct: 12288936 tgttcgcaacgaaggaagaacaacctattctccttagaaaggatggtatcaggactcttg 12288877 Query: 289 catccattacatatgacatattcat 313 || ||||| ||||||||||| |||| Sbjct: 12288876 cacccattgcatatgacatactcat 12288852 Score = 93.7 bits (47), Expect = 7e-16 Identities = 71/79 (89%) Strand = Plus / Minus Query: 149 cttaagttccagccttccgacgcccaacttgcgccacaaatccagccttgataggagcaa 208 |||| ||||||||||||||||| |||||||| || || |||||||||||||||||||||| Sbjct: 12290365 cttaggttccagccttccgacgaccaacttgggcaacgaatccagccttgataggagcaa 12290306 Query: 209 ctgaccttgacgaaccaca 227 | || ||||| |||||||| Sbjct: 12290305 cagatcttgaagaaccaca 12290287
>gb|AC137699.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0029K10, from chromosome 3, complete sequence Length = 135940 Score = 246 bits (124), Expect = 7e-62 Identities = 142/148 (95%) Strand = Plus / Minus Query: 457 gttttgcacaagtccatgaagttcacaaaaactgtcttctttgtgccttccctaagaact 516 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 60806 gttttgcacaaatccatgaagttcacaaaaactgtcttctttgtgccttccctaagaact 60747 Query: 517 tgaggaggccgcataactgttcttcgtctatcaccagcaagatctggattattctcacgc 576 |||||||||| |||||| |||||||||||||||||||||||||| ||||||||||||||| Sbjct: 60746 tgaggaggcctcataacagttcttcgtctatcaccagcaagatcaggattattctcacgc 60687 Query: 577 aggatattgaagactctgccaagcagct 604 |||||||| || |||||||||||||||| Sbjct: 60686 aggatattaaatactctgccaagcagct 60659 Score = 212 bits (107), Expect = 1e-51 Identities = 134/143 (93%) Strand = Plus / Minus Query: 314 tgatgtatctcctgagtatagcttcaaagttcttcggggcaaatcttcctttgataacta 373 |||| |||||||| ||||| ||||||||||| || || |||||||||||||| ||||| | Sbjct: 61057 tgatatatctcctaagtatggcttcaaagtttttaggagcaaatcttccttttataacca 60998 Query: 374 acctttgttgcccatcaagggatccacttgttcccatctcagcaagtaaaaacatcatca 433 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 60997 atctttgttgcccatcaagggatccacttgttcccatctcagcaagtaaaaacatcatca 60938 Query: 434 catgttcaggttgcctatgcatt 456 ||||||||||||||||||||||| Sbjct: 60937 catgttcaggttgcctatgcatt 60915 Score = 97.6 bits (49), Expect = 4e-17 Identities = 76/85 (89%) Strand = Plus / Minus Query: 229 tgttcacaacgaaggaagaacaaccgattctccttggaaaggatggtatctgggctctta 288 ||||| ||||||||||||||||||| ||||||||| |||||||||||||| || ||||| Sbjct: 61706 tgttcgcaacgaaggaagaacaacctattctccttagaaaggatggtatcaggactcttg 61647 Query: 289 catccattacatatgacatattcat 313 || ||||| ||||||||||| |||| Sbjct: 61646 cacccattgcatatgacatactcat 61622 Score = 93.7 bits (47), Expect = 7e-16 Identities = 71/79 (89%) Strand = Plus / Minus Query: 149 cttaagttccagccttccgacgcccaacttgcgccacaaatccagccttgataggagcaa 208 |||| ||||||||||||||||| |||||||| || || |||||||||||||||||||||| Sbjct: 63135 cttaggttccagccttccgacgaccaacttgggcaacgaatccagccttgataggagcaa 63076 Query: 209 ctgaccttgacgaaccaca 227 | || ||||| |||||||| Sbjct: 63075 cagatcttgaagaaccaca 63057
>gb|DQ284468.1| Solanum tuberosum clone 109D01 eukaryotic translation initiation factor 2 beta subunit-like mRNA, complete cds Length = 1033 Score = 226 bits (114), Expect = 7e-56 Identities = 378/466 (81%) Strand = Plus / Minus Query: 157 ccagccttccgacgcccaacttgcgccacaaatccagccttgataggagcaactgacctt 216 ||||| |||||||| ||||| | || || || ||||| ||||||||||||||||| ||| Sbjct: 862 ccagctttccgacgtccaacacgagcaacgaaaccagctttgataggagcaactgatctt 803 Query: 217 gacgaaccacattgttcacaacgaaggaagaacaaccgattctccttggaaaggatggta 276 || ||||| | ||||| || |||||||| | || ||||| || |||||||| ||| Sbjct: 802 ccagagccacacttctcacatcggaggaagaaaagacggttctcttttgaaaggatagta 743 Query: 277 tctgggctcttacatccattacatatgacatattcattgatgtatctcctgagtatagct 336 ||||| || ||||| ||||| || |||||||| ||||||| |||| | ||| || || Sbjct: 742 tctggacttttacagccattgcaaatgacatactcattgacatatcggcggaggattcct 683 Query: 337 tcaaagttcttcggggcaaatcttcctttgataactaacctttgttgcccatcaagggat 396 ||||| ||||| || ||||||||||| ||||| || || ||||| ||||||||||| ||| Sbjct: 682 tcaaaattcttaggagcaaatcttcccttgatgaccaatctttgctgcccatcaagtgat 623 Query: 397 ccacttgttcccatctcagcaagtaaaaacatcatcacatgttcaggttgcctatgcatt 456 ||||| || ||||| ||||| || || || |||| ||||| ||||| ||||||||||| Sbjct: 622 ccactagtccccatttcagccagcaagaaagtcataacatgctcaggctgcctatgcatc 563 Query: 457 gttttgcacaagtccatgaagttcacaaaaactgtcttctttgtgccttccctaagaact 516 || ||||| | |||||||| |||||||| || || |||||||||||||| | ||||||| Sbjct: 562 gtcttgcaaagatccatgaaattcacaaacacagttttctttgtgccttcacgaagaact 503 Query: 517 tgaggaggccgcataactgttcttcgtctatcaccagcaagatctggattattctcacgc 576 ||||| |||| ||||||||| ||||| ||||| |||||||| || ||||| |||||||| Sbjct: 502 tgagggggcctcataactgtccttcgcctatctccagcaagctcgggattgttctcacgg 443 Query: 577 aggatattgaagactctgccaagcagctcatcgtatttgtaatctc 622 || |||||||| |||||||| || ||||| || |||| ||||||| Sbjct: 442 agaatattgaatactctgcccagaagctcctcatattcataatctc 397
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 155 bits (78), Expect = 2e-34 Identities = 111/122 (90%) Strand = Plus / Plus Query: 334 gcttcaaagttcttcggggcaaatcttcctttgataactaacctttgttgcccatcaagg 393 ||||| ||||| ||||| ||||||||||||||||| || |||||||| ||||||||||| Sbjct: 28807344 gcttcgaagtttttcggagcaaatcttcctttgatcaccaacctttgctgcccatcaagt 28807403 Query: 394 gatccacttgttcccatctcagcaagtaaaaacatcatcacatgttcaggttgcctatgc 453 ||||||||||| ||||| |||||||| ||||||||||||||||| ||||||||||||||| Sbjct: 28807404 gatccacttgtccccatttcagcaagcaaaaacatcatcacatgctcaggttgcctatgc 28807463 Query: 454 at 455 || Sbjct: 28807464 at 28807465 Score = 127 bits (64), Expect = 5e-26 Identities = 121/140 (86%) Strand = Plus / Plus Query: 457 gttttgcacaagtccatgaagttcacaaaaactgtcttctttgtgccttccctaagaact 516 ||||||||||||||||| || |||||||||||||||||||| ||||| || | |||||| Sbjct: 28807570 gttttgcacaagtccataaaattcacaaaaactgtcttcttcgtgccctctcgaagaacc 28807629 Query: 517 tgaggaggccgcataactgttcttcgtctatcaccagcaagatctggattattctcacgc 576 || || |||| ||| || ||||| ||||| || ||||||||||||||||| || |||||| Sbjct: 28807630 tgtggcggcctcatgacagttctgcgtctgtctccagcaagatctggattgttttcacgc 28807689 Query: 577 aggatattgaagactctgcc 596 || |||||||| |||||||| Sbjct: 28807690 agaatattgaacactctgcc 28807709 Score = 71.9 bits (36), Expect = 2e-09 Identities = 60/68 (88%) Strand = Plus / Plus Query: 160 gccttccgacgcccaacttgcgccacaaatccagccttgataggagcaactgaccttgac 219 |||||||| || |||||||| || ||||||||||||||||| |||||||| ||||| ||| Sbjct: 28806166 gccttccgccgaccaacttgtgcgacaaatccagccttgattggagcaacagacctcgac 28806225 Query: 220 gaaccaca 227 || ||||| Sbjct: 28806226 gatccaca 28806233 Score = 50.1 bits (25), Expect = 0.009 Identities = 64/77 (83%) Strand = Plus / Plus Query: 229 tgttcacaacgaaggaagaacaaccgattctccttggaaaggatggtatctgggctctta 288 ||||| || ||||||||||||| ||||| |||||||| || |||||||| ||||| || Sbjct: 28807073 tgttcgcagcgaaggaagaacagacgattttccttggatagaatggtatcagggcttttg 28807132 Query: 289 catccattacatatgac 305 || ||||| || ||||| Sbjct: 28807133 caaccattgcaaatgac 28807149
>dbj|AP005099.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0008J01 Length = 159900 Score = 155 bits (78), Expect = 2e-34 Identities = 111/122 (90%) Strand = Plus / Plus Query: 334 gcttcaaagttcttcggggcaaatcttcctttgataactaacctttgttgcccatcaagg 393 ||||| ||||| ||||| ||||||||||||||||| || |||||||| ||||||||||| Sbjct: 65030 gcttcgaagtttttcggagcaaatcttcctttgatcaccaacctttgctgcccatcaagt 65089 Query: 394 gatccacttgttcccatctcagcaagtaaaaacatcatcacatgttcaggttgcctatgc 453 ||||||||||| ||||| |||||||| ||||||||||||||||| ||||||||||||||| Sbjct: 65090 gatccacttgtccccatttcagcaagcaaaaacatcatcacatgctcaggttgcctatgc 65149 Query: 454 at 455 || Sbjct: 65150 at 65151 Score = 127 bits (64), Expect = 5e-26 Identities = 121/140 (86%) Strand = Plus / Plus Query: 457 gttttgcacaagtccatgaagttcacaaaaactgtcttctttgtgccttccctaagaact 516 ||||||||||||||||| || |||||||||||||||||||| ||||| || | |||||| Sbjct: 65256 gttttgcacaagtccataaaattcacaaaaactgtcttcttcgtgccctctcgaagaacc 65315 Query: 517 tgaggaggccgcataactgttcttcgtctatcaccagcaagatctggattattctcacgc 576 || || |||| ||| || ||||| ||||| || ||||||||||||||||| || |||||| Sbjct: 65316 tgtggcggcctcatgacagttctgcgtctgtctccagcaagatctggattgttttcacgc 65375 Query: 577 aggatattgaagactctgcc 596 || |||||||| |||||||| Sbjct: 65376 agaatattgaacactctgcc 65395 Score = 71.9 bits (36), Expect = 2e-09 Identities = 60/68 (88%) Strand = Plus / Plus Query: 160 gccttccgacgcccaacttgcgccacaaatccagccttgataggagcaactgaccttgac 219 |||||||| || |||||||| || ||||||||||||||||| |||||||| ||||| ||| Sbjct: 63852 gccttccgccgaccaacttgtgcgacaaatccagccttgattggagcaacagacctcgac 63911 Query: 220 gaaccaca 227 || ||||| Sbjct: 63912 gatccaca 63919 Score = 50.1 bits (25), Expect = 0.009 Identities = 64/77 (83%) Strand = Plus / Plus Query: 229 tgttcacaacgaaggaagaacaaccgattctccttggaaaggatggtatctgggctctta 288 ||||| || ||||||||||||| ||||| |||||||| || |||||||| ||||| || Sbjct: 64759 tgttcgcagcgaaggaagaacagacgattttccttggatagaatggtatcagggcttttg 64818 Query: 289 catccattacatatgac 305 || ||||| || ||||| Sbjct: 64819 caaccattgcaaatgac 64835
>ref|NM_203088.1| Arabidopsis thaliana EIF2 BETA AT5G20920 (EIF2 BETA) transcript variant AT5G20920.2 mRNA, complete cds Length = 1151 Score = 139 bits (70), Expect = 1e-29 Identities = 232/286 (81%) Strand = Plus / Minus Query: 335 cttcaaagttcttcggggcaaatcttcctttgataactaacctttgttgcccatcaaggg 394 ||||||| ||||| || ||||| ||||| || | ||| |||||||| ||||||||||| | Sbjct: 697 cttcaaaattcttaggtgcaaaccttcccttaacaaccaacctttgctgcccatcaagcg 638 Query: 395 atccacttgttcccatctcagcaagtaaaaacatcatcacatgttcaggttgcctatgca 454 | ||||| || |||| ||||||||| || | ||| ||||| || ||||| | ||||| Sbjct: 637 aaccactagtacccaactcagcaagcaagtattgcataacatgatctggttgacgatgca 578 Query: 455 ttgttttgcacaagtccatgaagttcacaaaaactgtcttctttgtgccttccctaagaa 514 | || ||||| | |||||||||||| ||||| || ||||||||||| || || | ||||| Sbjct: 577 tcgtcttgcaaaggtccatgaagttgacaaagacagtcttctttgtcccctcacgaagaa 518 Query: 515 cttgaggaggccgcataactgttcttcgtctatcaccagcaagatctggattattctcac 574 |||||||||||| ||||||||| | || ||||| |||||||| || |||||||| |||| Sbjct: 517 cttgaggaggcctcataactgtacgacgcctatctccagcaagctccggattattttcac 458 Query: 575 gcaggatattgaagactctgccaagcagctcatcgtatttgtaatc 620 | || || || |||||||| ||||| ||||| || ||| ||||||| Sbjct: 457 ggagaatgttaaagactctaccaagaagctcgtcatatatgtaatc 412
>ref|NM_122100.2| Arabidopsis thaliana EIF2 BETA AT5G20920 (EIF2 BETA) transcript variant AT5G20920.1 mRNA, complete cds Length = 1194 Score = 139 bits (70), Expect = 1e-29 Identities = 232/286 (81%) Strand = Plus / Minus Query: 335 cttcaaagttcttcggggcaaatcttcctttgataactaacctttgttgcccatcaaggg 394 ||||||| ||||| || ||||| ||||| || | ||| |||||||| ||||||||||| | Sbjct: 740 cttcaaaattcttaggtgcaaaccttcccttaacaaccaacctttgctgcccatcaagcg 681 Query: 395 atccacttgttcccatctcagcaagtaaaaacatcatcacatgttcaggttgcctatgca 454 | ||||| || |||| ||||||||| || | ||| ||||| || ||||| | ||||| Sbjct: 680 aaccactagtacccaactcagcaagcaagtattgcataacatgatctggttgacgatgca 621 Query: 455 ttgttttgcacaagtccatgaagttcacaaaaactgtcttctttgtgccttccctaagaa 514 | || ||||| | |||||||||||| ||||| || ||||||||||| || || | ||||| Sbjct: 620 tcgtcttgcaaaggtccatgaagttgacaaagacagtcttctttgtcccctcacgaagaa 561 Query: 515 cttgaggaggccgcataactgttcttcgtctatcaccagcaagatctggattattctcac 574 |||||||||||| ||||||||| | || ||||| |||||||| || |||||||| |||| Sbjct: 560 cttgaggaggcctcataactgtacgacgcctatctccagcaagctccggattattttcac 501 Query: 575 gcaggatattgaagactctgccaagcagctcatcgtatttgtaatc 620 | || || || |||||||| ||||| ||||| || ||| ||||||| Sbjct: 500 ggagaatgttaaagactctaccaagaagctcgtcatatatgtaatc 455
>gb|BT000056.1| Arabidopsis thaliana translation initiation factor eIF-2 beta chain-like protein (At5g20920) mRNA, complete cds Length = 844 Score = 139 bits (70), Expect = 1e-29 Identities = 232/286 (81%) Strand = Plus / Minus Query: 335 cttcaaagttcttcggggcaaatcttcctttgataactaacctttgttgcccatcaaggg 394 ||||||| ||||| || ||||| ||||| || | ||| |||||||| ||||||||||| | Sbjct: 628 cttcaaaattcttaggtgcaaaccttcccttaacaaccaacctttgctgcccatcaagcg 569 Query: 395 atccacttgttcccatctcagcaagtaaaaacatcatcacatgttcaggttgcctatgca 454 | ||||| || |||| ||||||||| || | ||| ||||| || ||||| | ||||| Sbjct: 568 aaccactagtacccaactcagcaagcaagtattgcataacatgatctggttgacgatgca 509 Query: 455 ttgttttgcacaagtccatgaagttcacaaaaactgtcttctttgtgccttccctaagaa 514 | || ||||| | |||||||||||| ||||| || ||||||||||| || || | ||||| Sbjct: 508 tcgtcttgcaaaggtccatgaagttgacaaagacagtcttctttgtcccctcacgaagaa 449 Query: 515 cttgaggaggccgcataactgttcttcgtctatcaccagcaagatctggattattctcac 574 |||||||||||| ||||||||| | || ||||| |||||||| || |||||||| |||| Sbjct: 448 cttgaggaggcctcataactgtacgacgcctatctccagcaagctccggattattttcac 389 Query: 575 gcaggatattgaagactctgccaagcagctcatcgtatttgtaatc 620 | || || || |||||||| ||||| ||||| || ||| ||||||| Sbjct: 388 ggagaatgttaaagactctaccaagaagctcgtcatatatgtaatc 343
>gb|AY128324.1| Arabidopsis thaliana translation initiation factor eIF-2 beta chain-like protein (At5g20920) mRNA, complete cds Length = 1095 Score = 139 bits (70), Expect = 1e-29 Identities = 232/286 (81%) Strand = Plus / Minus Query: 335 cttcaaagttcttcggggcaaatcttcctttgataactaacctttgttgcccatcaaggg 394 ||||||| ||||| || ||||| ||||| || | ||| |||||||| ||||||||||| | Sbjct: 699 cttcaaaattcttaggtgcaaaccttcccttaacaaccaacctttgctgcccatcaagcg 640 Query: 395 atccacttgttcccatctcagcaagtaaaaacatcatcacatgttcaggttgcctatgca 454 | ||||| || |||| ||||||||| || | ||| ||||| || ||||| | ||||| Sbjct: 639 aaccactagtacccaactcagcaagcaagtattgcataacatgatctggttgacgatgca 580 Query: 455 ttgttttgcacaagtccatgaagttcacaaaaactgtcttctttgtgccttccctaagaa 514 | || ||||| | |||||||||||| ||||| || ||||||||||| || || | ||||| Sbjct: 579 tcgtcttgcaaaggtccatgaagttgacaaagacagtcttctttgtcccctcacgaagaa 520 Query: 515 cttgaggaggccgcataactgttcttcgtctatcaccagcaagatctggattattctcac 574 |||||||||||| ||||||||| | || ||||| |||||||| || |||||||| |||| Sbjct: 519 cttgaggaggcctcataactgtacgacgcctatctccagcaagctccggattattttcac 460 Query: 575 gcaggatattgaagactctgccaagcagctcatcgtatttgtaatc 620 | || || || |||||||| ||||| ||||| || ||| ||||||| Sbjct: 459 ggagaatgttaaagactctaccaagaagctcgtcatatatgtaatc 414
>gb|AF353095.1|AF353095 Arabidopsis thaliana protein synthesis initiation factor eIF2 beta mRNA, complete cds Length = 1160 Score = 139 bits (70), Expect = 1e-29 Identities = 232/286 (81%) Strand = Plus / Minus Query: 335 cttcaaagttcttcggggcaaatcttcctttgataactaacctttgttgcccatcaaggg 394 ||||||| ||||| || ||||| ||||| || | ||| |||||||| ||||||||||| | Sbjct: 726 cttcaaaattcttaggtgcaaaccttcccttaacaaccaacctttgctgcccatcaagcg 667 Query: 395 atccacttgttcccatctcagcaagtaaaaacatcatcacatgttcaggttgcctatgca 454 | ||||| || |||| ||||||||| || | ||| ||||| || ||||| | ||||| Sbjct: 666 aaccactagtacccaactcagcaagcaagtattgcataacatgatctggttgacgatgca 607 Query: 455 ttgttttgcacaagtccatgaagttcacaaaaactgtcttctttgtgccttccctaagaa 514 | || ||||| | |||||||||||| ||||| || ||||||||||| || || | ||||| Sbjct: 606 tcgtcttgcaaaggtccatgaagttgacaaagacagtcttctttgtcccctcacgaagaa 547 Query: 515 cttgaggaggccgcataactgttcttcgtctatcaccagcaagatctggattattctcac 574 |||||||||||| ||||||||| | || ||||| |||||||| || |||||||| |||| Sbjct: 546 cttgaggaggcctcataactgtacgacgcctatctccagcaagctccggattattttcac 487 Query: 575 gcaggatattgaagactctgccaagcagctcatcgtatttgtaatc 620 | || || || |||||||| ||||| ||||| || ||| ||||||| Sbjct: 486 ggagaatgttaaagactctaccaagaagctcgtcatatatgtaatc 441
>gb|AY087810.1| Arabidopsis thaliana clone 3855 mRNA, complete sequence Length = 1134 Score = 139 bits (70), Expect = 1e-29 Identities = 232/286 (81%) Strand = Plus / Minus Query: 335 cttcaaagttcttcggggcaaatcttcctttgataactaacctttgttgcccatcaaggg 394 ||||||| ||||| || ||||| ||||| || | ||| |||||||| ||||||||||| | Sbjct: 739 cttcaaaattcttaggtgcaaaccttcccttaacaaccaacctttgctgcccatcaagcg 680 Query: 395 atccacttgttcccatctcagcaagtaaaaacatcatcacatgttcaggttgcctatgca 454 | ||||| || |||| ||||||||| || | ||| ||||| || ||||| | ||||| Sbjct: 679 aaccactagtacccaactcagcaagcaagtattgcataacatgatctggttgacgatgca 620 Query: 455 ttgttttgcacaagtccatgaagttcacaaaaactgtcttctttgtgccttccctaagaa 514 | || ||||| | |||||||||||| ||||| || ||||||||||| || || | ||||| Sbjct: 619 tcgtcttgcaaaggtccatgaagttgacaaagacagtcttctttgtcccctcacgaagaa 560 Query: 515 cttgaggaggccgcataactgttcttcgtctatcaccagcaagatctggattattctcac 574 |||||||||||| ||||||||| | || ||||| |||||||| || |||||||| |||| Sbjct: 559 cttgaggaggcctcataactgtacgacgcctatctccagcaagctccggattattttcac 500 Query: 575 gcaggatattgaagactctgccaagcagctcatcgtatttgtaatc 620 | || || || |||||||| ||||| ||||| || ||| ||||||| Sbjct: 499 ggagaatgttaaagactctaccaagaagctcgtcatatatgtaatc 454
>emb|BX829594.1|CNS0A1BT Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB23ZF01 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1040 Score = 131 bits (66), Expect = 3e-27 Identities = 231/286 (80%) Strand = Plus / Minus Query: 335 cttcaaagttcttcggggcaaatcttcctttgataactaacctttgttgcccatcaaggg 394 ||||||| ||||| || ||||| ||||| || | ||| |||||||| ||||||| ||| | Sbjct: 697 cttcaaaattcttaggtgcaaaccttcccttaacaaccaacctttgctgcccattaagcg 638 Query: 395 atccacttgttcccatctcagcaagtaaaaacatcatcacatgttcaggttgcctatgca 454 | ||||| || |||| ||||||||| || | ||| ||||| || ||||| | ||||| Sbjct: 637 aaccactagtacccaactcagcaagcaagtattgcataacatgatctggttgacgatgca 578 Query: 455 ttgttttgcacaagtccatgaagttcacaaaaactgtcttctttgtgccttccctaagaa 514 | || ||||| | |||||||||||| ||||| || ||||||||||| || || | ||||| Sbjct: 577 tcgtcttgcaaaggtccatgaagttgacaaagacagtcttctttgtcccctcacgaagaa 518 Query: 515 cttgaggaggccgcataactgttcttcgtctatcaccagcaagatctggattattctcac 574 |||||||||||| ||||||||| | || ||||| |||||||| || |||||||| |||| Sbjct: 517 cttgaggaggcctcataactgtacgacgcctatctccagcaagctccggattattttcac 458 Query: 575 gcaggatattgaagactctgccaagcagctcatcgtatttgtaatc 620 | || || || |||||||| ||||| ||||| || ||| ||||||| Sbjct: 457 ggagaatgttaaagactctaccaagaagctcgtcatatatgtaatc 412
>gb|AC141923.27| Medicago truncatula clone mth2-7f19, complete sequence Length = 116685 Score = 107 bits (54), Expect = 4e-20 Identities = 123/146 (84%) Strand = Plus / Plus Query: 459 tttgcacaagtccatgaagttcacaaaaactgtcttctttgtgccttccctaagaacttg 518 |||||||| |||||| || |||||||| || || |||||||||||||| | |||||||| Sbjct: 89663 tttgcacaggtccataaaattcacaaacacagttttctttgtgccttcacggagaacttg 89722 Query: 519 aggaggccgcataactgttcttcgtctatcaccagcaagatctggattattctcacgcag 578 |||||||| ||||||||| ||||| | ||| ||||| ||||||||||||| ||||| || Sbjct: 89723 aggaggcctcataactgtccttcgccgatctccagcgagatctggattatgttcacgaag 89782 Query: 579 gatattgaagactctgccaagcagct 604 || ||||| || |||||||| |||| Sbjct: 89783 aatgttgaacaccctgccaagaagct 89808 Score = 44.1 bits (22), Expect = 0.55 Identities = 49/58 (84%) Strand = Plus / Plus Query: 256 ttctccttggaaaggatggtatctgggctcttacatccattacatatgacatattcat 313 |||||||| ||||| | || ||||| ||||| |||||| |||| ||||||||||||| Sbjct: 89007 ttctcctttgaaagtaatgtgtctggactcttgcatccaatacaaatgacatattcat 89064
>gb|AF296834.1|F22D1 Arabidopsis thaliana BAC F22D1 Length = 96102 Score = 97.6 bits (49), Expect = 4e-17 Identities = 115/137 (83%) Strand = Plus / Plus Query: 468 gtccatgaagttcacaaaaactgtcttctttgtgccttccctaagaacttgaggaggccg 527 |||||||||||| ||||| || ||||||||||| || || | ||||||||||||||||| Sbjct: 39355 gtccatgaagttgacaaagacagtcttctttgtcccctcacgaagaacttgaggaggcct 39414 Query: 528 cataactgttcttcgtctatcaccagcaagatctggattattctcacgcaggatattgaa 587 ||||||||| | || ||||| |||||||| || |||||||| ||||| || || || || Sbjct: 39415 cataactgtacgacgcctatctccagcaagctccggattattttcacggagaatgttaaa 39474 Query: 588 gactctgccaagcagct 604 |||||| ||||| |||| Sbjct: 39475 gactctaccaagaagct 39491 Score = 58.0 bits (29), Expect = 4e-05 Identities = 71/85 (83%) Strand = Plus / Plus Query: 335 cttcaaagttcttcggggcaaatcttcctttgataactaacctttgttgcccatcaaggg 394 ||||||| ||||| || ||||| ||||| || | ||| |||||||| ||||||||||| | Sbjct: 39105 cttcaaaattcttaggtgcaaaccttcccttaacaaccaacctttgctgcccatcaagcg 39164 Query: 395 atccacttgttcccatctcagcaag 419 | ||||| || |||| ||||||||| Sbjct: 39165 aaccactagtacccaactcagcaag 39189 Score = 40.1 bits (20), Expect = 8.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 256 ttctccttggaaaggatggtatctgggctctt 287 ||||||||||| || ||||| ||||||||||| Sbjct: 38935 ttctccttggagagaatggtgtctgggctctt 38966
>gb|U80269.1|MDU80269 Malus domestica translation initiation factor 2 beta (eIF-2beta) mRNA, partial cds Length = 1135 Score = 89.7 bits (45), Expect = 1e-14 Identities = 213/269 (79%) Strand = Plus / Minus Query: 301 atgacatattcattgatgtatctcctgagtatagcttcaaagttcttcggggcaaatctt 360 |||||||||||||||| |||| || ||||| ||||||| ||||| || ||||||||| Sbjct: 775 atgacatattcattgacatatcgccgcagtattccttcaaaattctttggtgcaaatctt 716 Query: 361 cctttgataactaacctttgttgcccatcaagggatccacttgttcccatctcagcaagt 420 || || | ||| | ||| || || |||||||| |||||||||||||||| || ||||| Sbjct: 715 cccttaacaaccagcctctgctgtccatcaagtgatccacttgttcccagttcggcaagc 656 Query: 421 aaaaacatcatcacatgttcaggttgcctatgcattgttttgcacaagtccatgaagttc 480 || || ||| || || || || ||||||||||| || ||||| | |||||||| ||| Sbjct: 655 aagaatgccatgacgtgatccggctgcctatgcatcgtcttgcatagatccatgaaattc 596 Query: 481 acaaaaactgtcttctttgtgccttccctaagaacttgaggaggccgcataactgttctt 540 |||||||| | ||||||||||| || | ||| ||||| ||||||| ||| ||||| || Sbjct: 595 acaaaaacagctttctttgtgccctcacgaagtacttgtggaggcctcatcactgtccta 536 Query: 541 cgtctatcaccagcaagatctggattatt 569 || || || ||||| ||||| || ||||| Sbjct: 535 cgcctgtctccagccagatccgggttatt 507
>ref|NM_111671.1| Arabidopsis thaliana translation initiation factor AT3G07920 mRNA, complete cds Length = 510 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Minus Query: 450 atgcattgttttgcacaagtccatgaagttcacaaaaactgtcttctttgtgcctt 505 |||||| || ||||| ||||||| ||||| ||||| ||||||||||||||||||| Sbjct: 219 atgcatcgtcttgcaatagtccataaagttgacaaagactgtcttctttgtgcctt 164
>gb|AC013483.7|ATAC013483 Arabidopsis thaliana chromosome III BAC F17A17 genomic sequence, complete sequence Length = 121054 Score = 54.0 bits (27), Expect = 6e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 467 agtccatgaagttcacaaaaactgtcttctttgtgcctt 505 ||||||| ||||| ||||| ||||||||||||||||||| Sbjct: 76721 agtccataaagttgacaaagactgtcttctttgtgcctt 76759
>gb|AE009442.1| Xylella fastidiosa Temecula1, complete genome Length = 2519802 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Plus Query: 310 tcattgatgtatctcctgagta 331 |||||||||||||||||||||| Sbjct: 203907 tcattgatgtatctcctgagta 203928
>gb|AC006004.2| Homo sapiens PAC clone RP4-803F10 from 7, complete sequence Length = 103530 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 50 gaaataacaaaaaccacaagg 70 ||||||||||||||||||||| Sbjct: 89915 gaaataacaaaaaccacaagg 89935
>gb|AC005995.3| Homo sapiens PAC clone RP1-42M2 from 7, complete sequence Length = 80010 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 488 ctgtcttctttgtgccttccc 508 ||||||||||||||||||||| Sbjct: 42431 ctgtcttctttgtgccttccc 42451
>emb|AL844597.12| Zebrafish DNA sequence from clone DKEY-9M10 in linkage group 10, complete sequence Length = 78650 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 478 ttcacaaaaactgtcttcttt 498 ||||||||||||||||||||| Sbjct: 26751 ttcacaaaaactgtcttcttt 26771
>gb|AC146207.3| Pan troglodytes BAC clone RP43-25M19 from 7, complete sequence Length = 179594 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 50 gaaataacaaaaaccacaagg 70 ||||||||||||||||||||| Sbjct: 67829 gaaataacaaaaaccacaagg 67849
>tpe|BN000796.1| TPA: TPA_inf: Schistosoma mansoni Perere-5 non-LTR retrotransposon Length = 5057 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 357 tcttcctttgataactaacct 377 ||||||||||||||||||||| Sbjct: 2901 tcttcctttgataactaacct 2921
>emb|AL844166.6| Mouse DNA sequence from clone RP23-107K21 on chromosome 2, complete sequence Length = 215505 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 401 ttgttcccatctcagcaagta 421 ||||||||||||||||||||| Sbjct: 116826 ttgttcccatctcagcaagta 116846
>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome Length = 6438405 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 546 atcaccagcaagatctggat 565 |||||||||||||||||||| Sbjct: 2128266 atcaccagcaagatctggat 2128247
>gb|AC161050.2| Mus musculus BAC clone RP23-477C12 from chromosome 12, complete sequence Length = 197084 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 394 gatccacttgttcccatctc 413 |||||||||||||||||||| Sbjct: 185137 gatccacttgttcccatctc 185156
>gb|AE017355.1| Bacillus thuringiensis serovar konkukian str. 97-27, complete genome Length = 5237682 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 237 acgaaggaagaacaaccgat 256 |||||||||||||||||||| Sbjct: 2123439 acgaaggaagaacaaccgat 2123458
>gb|AY692930.1| Saccharomyces cerevisiae clone FLH158340.01X YPL237W gene, complete cds Length = 858 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 543 tctatcaccagcaagatctggatt 566 ||||||||||||||| |||||||| Sbjct: 459 tctatcaccagcaagttctggatt 436
>gb|AE017334.2| Bacillus anthracis str. 'Ames Ancestor', complete genome Length = 5227419 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 237 acgaaggaagaacaaccgat 256 |||||||||||||||||||| Sbjct: 2103912 acgaaggaagaacaaccgat 2103931
>gb|AE017225.1| Bacillus anthracis str. Sterne, complete genome Length = 5228663 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 237 acgaaggaagaacaaccgat 256 |||||||||||||||||||| Sbjct: 2103816 acgaaggaagaacaaccgat 2103835
>gb|CP000001.1| Bacillus cereus E33L, complete genome Length = 5300915 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 237 acgaaggaagaacaaccgat 256 |||||||||||||||||||| Sbjct: 2158814 acgaaggaagaacaaccgat 2158833
>gb|AC112491.4| Homo sapiens 3 BAC RP11-3P17 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 154758 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 329 gtatagcttcaaagttcttc 348 |||||||||||||||||||| Sbjct: 145103 gtatagcttcaaagttcttc 145084
>emb|Z67751.1|SC38KCXVI S.cerevisiae DNA (chromosome XVI; 38 kb) Length = 37808 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 543 tctatcaccagcaagatctggatt 566 ||||||||||||||| |||||||| Sbjct: 32339 tctatcaccagcaagttctggatt 32316
>emb|CR925699.6| Zebrafish DNA sequence from clone RP71-18J1 in linkage group 4, complete sequence Length = 150030 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 112 taaatcggcaaattgttgga 131 |||||||||||||||||||| Sbjct: 140428 taaatcggcaaattgttgga 140409
>emb|AL845475.12| Mouse DNA sequence from clone RP23-403E20 on chromosome 11 Contains a novel pseudogene (similar to RIKEN cDNA 4833439L19 gene) and a ribosomal protein L26 (Rpl26) pseudogene, complete sequence Length = 147170 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 494 tctttgtgccttccctaagaactt 517 ||||| |||||||||||||||||| Sbjct: 127503 tctttctgccttccctaagaactt 127480
>emb|BX927098.24| Zebrafish DNA sequence from clone DKEY-228D14 in linkage group 13, complete sequence Length = 229413 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 392 gggatccacttgttcccatc 411 |||||||||||||||||||| Sbjct: 44298 gggatccacttgttcccatc 44317
>gb|BC065855.1| Danio rerio solute carrier family 25, member 16, mRNA (cDNA clone MGC:77742 IMAGE:7000837), complete cds Length = 1771 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 392 gggatccacttgttcccatc 411 |||||||||||||||||||| Sbjct: 1703 gggatccacttgttcccatc 1684
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 546 atcaccagcaagatctggat 565 |||||||||||||||||||| Sbjct: 4700671 atcaccagcaagatctggat 4700690
>emb|BX664731.12| Zebrafish DNA sequence from clone DKEY-67N5 in linkage group 8, complete sequence Length = 104134 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 479 tcacaaaaactgtcttcttt 498 |||||||||||||||||||| Sbjct: 68353 tcacaaaaactgtcttcttt 68372
>emb|BX537282.9| Zebrafish DNA sequence from clone DKEY-90A24 in linkage group 5, complete sequence Length = 124378 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 479 tcacaaaaactgtcttcttt 498 |||||||||||||||||||| Sbjct: 30584 tcacaaaaactgtcttcttt 30565
>dbj|AP006716.1| Staphylococcus haemolyticus JCSC1435 DNA, complete genome Length = 2685015 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 372 taacctttgttgcccatcaa 391 |||||||||||||||||||| Sbjct: 228376 taacctttgttgcccatcaa 228395
>gb|AE010270.1| Pyrococcus furiosus DSM 3638, section 145 of 173 of the complete genome Length = 10684 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 489 tgtcttctttgtgccttccc 508 |||||||||||||||||||| Sbjct: 7969 tgtcttctttgtgccttccc 7950
>gb|AF159904.1|AF159904 Lapemis hardwickii serine/threonin protein kinase-like protein mRNA, partial cds Length = 946 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 351 ggcaaatcttcctttgataa 370 |||||||||||||||||||| Sbjct: 600 ggcaaatcttcctttgataa 619
>emb|BX323888.8| Zebrafish DNA sequence from clone CH211-134G21 in linkage group 3, complete sequence Length = 178607 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 479 tcacaaaaactgtcttcttt 498 |||||||||||||||||||| Sbjct: 20780 tcacaaaaactgtcttcttt 20799
>gb|AC159622.2| Mus musculus BAC clone RP24-289D12 from chromosome 12, complete sequence Length = 174662 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 394 gatccacttgttcccatctc 413 |||||||||||||||||||| Sbjct: 94614 gatccacttgttcccatctc 94595
>emb|BX510912.4| Zebrafish DNA sequence from clone CH211-18J22 in linkage group 3, complete sequence Length = 189210 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 392 gggatccacttgttcccatc 411 |||||||||||||||||||| Sbjct: 67002 gggatccacttgttcccatc 66983
>emb|BX119314.13| Zebrafish DNA sequence from clone DKEY-18H19 in linkage group 14, complete sequence Length = 203157 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 479 tcacaaaaactgtcttcttt 498 |||||||||||||||||||| Sbjct: 53996 tcacaaaaactgtcttcttt 53977
>emb|BX324215.14| Zebrafish DNA sequence from clone DKEY-42L16 in linkage group 22, complete sequence Length = 207877 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 479 tcacaaaaactgtcttcttt 498 |||||||||||||||||||| Sbjct: 184371 tcacaaaaactgtcttcttt 184390
>gb|BC045977.1| Danio rerio solute carrier family 25, member 16, mRNA (cDNA clone MGC:56187 IMAGE:5413585), complete cds Length = 1784 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 392 gggatccacttgttcccatc 411 |||||||||||||||||||| Sbjct: 1724 gggatccacttgttcccatc 1705
>emb|BX248324.9| Zebrafish DNA sequence from clone DKEY-227H16 in linkage group 20, complete sequence Length = 209057 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 479 tcacaaaaactgtcttcttt 498 |||||||||||||||||||| Sbjct: 184096 tcacaaaaactgtcttcttt 184115
>emb|CT025718.7| Zebrafish DNA sequence from clone CH73-129N6 in linkage group 4, complete sequence Length = 65440 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 112 taaatcggcaaattgttgga 131 |||||||||||||||||||| Sbjct: 44253 taaatcggcaaattgttgga 44272
>emb|Z73594.1|SCYPL238C S.cerevisiae chromosome XVI reading frame ORF YPL238c Length = 1521 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 543 tctatcaccagcaagatctggatt 566 ||||||||||||||| |||||||| Sbjct: 868 tctatcaccagcaagttctggatt 845
>emb|BX000465.12| Zebrafish DNA sequence from clone DKEY-30A6 in linkage group 22, complete sequence Length = 214999 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 479 tcacaaaaactgtcttcttt 498 |||||||||||||||||||| Sbjct: 166248 tcacaaaaactgtcttcttt 166229
>gb|AE016879.1| Bacillus anthracis str. Ames, complete genome Length = 5227293 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 237 acgaaggaagaacaaccgat 256 |||||||||||||||||||| Sbjct: 2103788 acgaaggaagaacaaccgat 2103807
>ref|NM_205549.1| Danio rerio solute carrier family 25, member 16 (slc25a16), mRNA Length = 1784 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 392 gggatccacttgttcccatc 411 |||||||||||||||||||| Sbjct: 1724 gggatccacttgttcccatc 1705
>gb|M21813.1|YSCELF2B S.cerevisiae SUI3 gene encoding translation initiation factor elF2 beta-subunit, complete cds Length = 1865 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 543 tctatcaccagcaagatctggatt 566 ||||||||||||||| |||||||| Sbjct: 1224 tctatcaccagcaagttctggatt 1201
>dbj|AB057373.1| Pyrococcus furiosus SRP54 gene for signal recognition particle protein 54, complete cds Length = 1332 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 489 tgtcttctttgtgccttccc 508 |||||||||||||||||||| Sbjct: 592 tgtcttctttgtgccttccc 573 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,561,434 Number of Sequences: 3902068 Number of extensions: 5561434 Number of successful extensions: 103344 Number of sequences better than 10.0: 63 Number of HSP's better than 10.0 without gapping: 63 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 102927 Number of HSP's gapped (non-prelim): 409 length of query: 626 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 603 effective length of database: 17,143,297,704 effective search space: 10337408515512 effective search space used: 10337408515512 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)