ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaal17k04 |
|---|---|
| Clone Library Name | barley_pub |
>RL29_RAT (P25886) 60S ribosomal protein L29 (P23)| Length = 155 Score = 83.2 bits (204), Expect = 1e-16 Identities = 37/51 (72%), Positives = 43/51 (84%) Frame = -1 Query: 355 AKSKNHTAHNQSYKAHRNGIKKPKRQRQASTKGMDPKFLRNLRYSRKHNVK 203 AKSKNHT HNQS K HRNGIKKP+ QR S KG+DPKFLRN+R+++KHN K Sbjct: 1 AKSKNHTTHNQSRKWHRNGIKKPRSQRYESLKGVDPKFLRNMRFAKKHNKK 51
>RL29_HUMAN (P47914) 60S ribosomal protein L29 (Cell surface heparin-binding| protein HIP) Length = 158 Score = 83.2 bits (204), Expect = 1e-16 Identities = 37/51 (72%), Positives = 43/51 (84%) Frame = -1 Query: 355 AKSKNHTAHNQSYKAHRNGIKKPKRQRQASTKGMDPKFLRNLRYSRKHNVK 203 AKSKNHT HNQS K HRNGIKKP+ QR S KG+DPKFLRN+R+++KHN K Sbjct: 1 AKSKNHTTHNQSRKWHRNGIKKPRSQRYESLKGVDPKFLRNMRFAKKHNKK 51
>RL29_BOVIN (Q58DW3) 60S ribosomal protein L29| Length = 151 Score = 83.2 bits (204), Expect = 1e-16 Identities = 37/51 (72%), Positives = 43/51 (84%) Frame = -1 Query: 355 AKSKNHTAHNQSYKAHRNGIKKPKRQRQASTKGMDPKFLRNLRYSRKHNVK 203 AKSKNHT HNQS K HRNGIKKP+ QR S KG+DPKFLRN+R+++KHN K Sbjct: 1 AKSKNHTTHNQSRKWHRNGIKKPRSQRYESLKGVDPKFLRNMRFAKKHNKK 51
>RL29_MACFA (Q8HXB8) 60S ribosomal protein L29| Length = 156 Score = 83.2 bits (204), Expect = 1e-16 Identities = 37/51 (72%), Positives = 43/51 (84%) Frame = -1 Query: 355 AKSKNHTAHNQSYKAHRNGIKKPKRQRQASTKGMDPKFLRNLRYSRKHNVK 203 AKSKNHT HNQS K HRNGIKKP+ QR S KG+DPKFLRN+R+++KHN K Sbjct: 1 AKSKNHTTHNQSRKWHRNGIKKPRSQRYESLKGVDPKFLRNMRFAKKHNKK 51
>RL29_PIG (Q95281) 60S ribosomal protein L29| Length = 159 Score = 83.2 bits (204), Expect = 1e-16 Identities = 37/51 (72%), Positives = 43/51 (84%) Frame = -1 Query: 355 AKSKNHTAHNQSYKAHRNGIKKPKRQRQASTKGMDPKFLRNLRYSRKHNVK 203 AKSKNHT HNQS K HRNGIKKP+ QR S KG+DPKFLRN+R+++KHN K Sbjct: 1 AKSKNHTTHNQSRKWHRNGIKKPRSQRYESLKGVDPKFLRNMRFAKKHNKK 51
>RL29_MOUSE (P47915) 60S ribosomal protein L29| Length = 159 Score = 83.2 bits (204), Expect = 1e-16 Identities = 37/51 (72%), Positives = 43/51 (84%) Frame = -1 Query: 355 AKSKNHTAHNQSYKAHRNGIKKPKRQRQASTKGMDPKFLRNLRYSRKHNVK 203 AKSKNHT HNQS K HRNGIKKP+ QR S KG+DPKFLRN+R+++KHN K Sbjct: 1 AKSKNHTTHNQSRKWHRNGIKKPRSQRYESLKGVDPKFLRNMRFAKKHNKK 51
>RL29_DROME (Q24154) 60S ribosomal protein L29 (L43)| Length = 76 Score = 76.3 bits (186), Expect = 2e-14 Identities = 37/55 (67%), Positives = 42/55 (76%) Frame = -1 Query: 358 MAKSKNHTAHNQSYKAHRNGIKKPKRQRQASTKGMDPKFLRNLRYSRKHNVKAGE 194 MAKSKNHT HNQ+ KAHRNGIK+P R+R ST GMD KFL N RY+RK N+ E Sbjct: 1 MAKSKNHTNHNQNKKAHRNGIKRPLRKRHESTLGMDVKFLINQRYARKGNLSREE 55
>RL29_YEAST (P05747) 60S ribosomal protein L29 (YL43)| Length = 58 Score = 70.5 bits (171), Expect = 9e-13 Identities = 33/52 (63%), Positives = 39/52 (75%) Frame = -1 Query: 355 AKSKNHTAHNQSYKAHRNGIKKPKRQRQASTKGMDPKFLRNLRYSRKHNVKA 200 AKSKNHTAHNQ+ KAHRNGIKKPK + S KG+DPKF RN +++ KA Sbjct: 1 AKSKNHTAHNQTRKAHRNGIKKPKTYKYPSLKGVDPKFRRNHKHALHGTAKA 52
>RL29_SCHPO (Q92366) 60S ribosomal protein L29 (L43)| Length = 60 Score = 63.2 bits (152), Expect = 1e-10 Identities = 29/52 (55%), Positives = 38/52 (73%) Frame = -1 Query: 355 AKSKNHTAHNQSYKAHRNGIKKPKRQRQASTKGMDPKFLRNLRYSRKHNVKA 200 AKSKNHT HNQ+ KAHRNGIK+P++ R S K D KF RN +++ + V+A Sbjct: 1 AKSKNHTNHNQNKKAHRNGIKRPQKHRYDSLKYRDAKFRRNQKFANRGTVEA 52
>CHD6_HUMAN (Q8TD26) Chromodomain-helicase-DNA-binding protein 6 (EC 3.6.1.-)| (ATP-dependent helicase CHD6) (CHD-6) (Radiation-induced gene B protein) Length = 2715 Score = 33.5 bits (75), Expect = 0.12 Identities = 16/47 (34%), Positives = 27/47 (57%) Frame = -1 Query: 406 RRRTPAQPEQQQKGSEMAKSKNHTAHNQSYKAHRNGIKKPKRQRQAS 266 R+R P +P++ +K E K+K H Q ++G KK ++ R+AS Sbjct: 120 RKREPKEPKEPRKAEEPKKAKEHKEPKQ-----KDGAKKARKPREAS 161
>T22D2_HUMAN (O75157) TSC22 domain family protein 2 (TSC22-related-inducible| leucine zipper protein 4) Length = 780 Score = 33.1 bits (74), Expect = 0.16 Identities = 23/56 (41%), Positives = 27/56 (48%), Gaps = 7/56 (12%) Frame = -3 Query: 404 PPNPSATGAAAE-------GIGDGQVEEPHGAQPVVQGAQERHQEAQAPAPGLHQG 258 P PS+TGAAA +G GQ GAQ + GA + EA AP G QG Sbjct: 393 PAQPSSTGAAASPATAATLPVGTGQNASSVGAQ--LMGASSQPSEAMAPRTGPAQG 446
>SETD8_BOVIN (Q2YDJ8) Histone-lysine N-methyltransferase, H4 lysine-20 specific| (EC 2.1.1.43) (Histone H4-K20 methyltransferase) (H4-K20-HMTase) (SET domain containing lysine methyltransferase 8) (SET domain-containing protein 8) Length = 352 Score = 31.6 bits (70), Expect = 0.47 Identities = 22/87 (25%), Positives = 38/87 (43%), Gaps = 9/87 (10%) Frame = -1 Query: 385 PEQQQKGSEMAKSKNHTAHNQSYKAHRNGIKKPKRQRQASTKGMDPKFLRN--------- 233 P Q+ + +E K+ + + A + G+KKP R +QA K K +N Sbjct: 128 PNQKSEAAEPPKTPTSSCDTPNAAAAKQGLKKPVRGKQAPRKKAQGKTQQNRKLTDFYPV 187 Query: 232 LRYSRKHNVKAGEGEVEK*DGRVSAGR 152 R SRK + E ++ D + +G+ Sbjct: 188 RRSSRKSKAELQSEERKRIDELIESGK 214
>UTP11_CAEEL (Q09462) Probable U3 small nucleolar RNA-associated protein 11 (U3| snoRNA-associated protein 11) Length = 262 Score = 31.2 bits (69), Expect = 0.62 Identities = 14/42 (33%), Positives = 25/42 (59%) Frame = -1 Query: 406 RRRTPAQPEQQQKGSEMAKSKNHTAHNQSYKAHRNGIKKPKR 281 + R +QPE ++K E+ K K++ + Y+ R+ IKK K+ Sbjct: 16 QHRERSQPEARRKYGELEKKKDYKLRAEDYQKKRDTIKKLKK 57
>SNUT3_XENTR (Q6DDA4) U4/U6.U5 tri-snRNP-associated protein 3| Length = 156 Score = 30.4 bits (67), Expect = 1.1 Identities = 20/76 (26%), Positives = 38/76 (50%) Frame = -1 Query: 406 RRRTPAQPEQQQKGSEMAKSKNHTAHNQSYKAHRNGIKKPKRQRQASTKGMDPKFLRNLR 227 RR A E++++ E ++S+ ++S HR + P+R R +S + P L++ R Sbjct: 16 RRSRSASRERERRRRERSRSRERR-RSRSRSPHRRRSRSPRRHRSSS---ISPGRLKDRR 71 Query: 226 YSRKHNVKAGEGEVEK 179 K + K +G E+ Sbjct: 72 DDDKKDSKESKGAKER 87
>SEPP1_RAT (P25236) Selenoprotein P precursor (SeP) [Contains: Selenoprotein| Se-P10; Selenoprotein Se-P6; Selenoprotein Se-P2; Selenoprotein Se-P1] Length = 385 Score = 30.4 bits (67), Expect = 1.1 Identities = 20/84 (23%), Positives = 33/84 (39%), Gaps = 4/84 (4%) Frame = -1 Query: 370 KGSEMAKSKNHTAHNQSYKAHRNGIKKPKRQRQAST----KGMDPKFLRNLRYSRKHNVK 203 K +E ++ NH H+ + G KP +Q + P L + + KH + Sbjct: 196 KTTEPSEEHNHHKHHDKHGHEHLGSSKPSENQQPGALDVETSLPPSGLHHHHHHHKHKGQ 255 Query: 202 AGEGEVEK*DGRVSAGRYVSCIAR 131 +G +E D S G +S R Sbjct: 256 HRQGHLESCDMGASEGLQLSLAQR 279
>THIC_BACAN (Q81WY7) Thiamine biosynthesis protein thiC| Length = 586 Score = 30.0 bits (66), Expect = 1.4 Identities = 17/56 (30%), Positives = 29/56 (51%) Frame = -1 Query: 403 RRTPAQPEQQQKGSEMAKSKNHTAHNQSYKAHRNGIKKPKRQRQASTKGMDPKFLR 236 + TP P+ +K + N T + + RNGI K + + A +G+DP+F+R Sbjct: 107 KHTPVFPQMDRKPLRAKQGANVTQMHYA----RNGIIKSEMEYVAIREGVDPEFVR 158
>B2_DAUCA (P37707) B2 protein| Length = 207 Score = 30.0 bits (66), Expect = 1.4 Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 1/33 (3%) Frame = -1 Query: 394 PAQPEQQQ-KGSEMAKSKNHTAHNQSYKAHRNG 299 P QP+QQQ G + K+KN +N S ++NG Sbjct: 16 PQQPQQQQFHGKSVKKNKNKNNNNNSESGNKNG 48
>MARCS_MOUSE (P26645) Myristoylated alanine-rich C-kinase substrate (MARCKS)| Length = 308 Score = 30.0 bits (66), Expect = 1.4 Identities = 21/64 (32%), Positives = 25/64 (39%), Gaps = 15/64 (23%) Frame = -3 Query: 401 PNPSATGAAAEGIGDGQVEEPHGA---------QPVVQGAQERHQ------EAQAPAPGL 267 P A GA AEG G+ E A QP + Q Q +A+ PAPG Sbjct: 200 PGEQAGGAGAEGAAGGEPREAEAAEPEQPEQPEQPAAEEPQAEEQSEAAGEKAEEPAPGA 259 Query: 266 HQGD 255 GD Sbjct: 260 TAGD 263
>NU5M_PIG (Q9TDR1) NADH-ubiquinone oxidoreductase chain 5 (EC 1.6.5.3) (NADH| dehydrogenase subunit 5) Length = 606 Score = 29.6 bits (65), Expect = 1.8 Identities = 15/54 (27%), Positives = 24/54 (44%) Frame = +3 Query: 120 TVEILAIHETYRPAETRPSYFSTSPSPAFTLCFLEYLRFLRNFGSIPLVEAWRW 281 T+ I+ + P+Y T+ S AFTL + L F+ G ++ W W Sbjct: 16 TIPIMMSNSNIYKTNLYPNYVKTTVSYAFTLSLVPLLMFMHT-GQEMIISNWHW 68
>MS84B_DROME (Q01643) Male-specific sperm protein Mst84Db| Length = 74 Score = 29.6 bits (65), Expect = 1.8 Identities = 9/15 (60%), Positives = 9/15 (60%) Frame = +1 Query: 298 CRSCAPCTTGCAPCG 342 C C PC GC PCG Sbjct: 45 CGPCGPCCGGCGPCG 59 Score = 27.3 bits (59), Expect = 8.9 Identities = 8/15 (53%), Positives = 10/15 (66%) Frame = +1 Query: 298 CRSCAPCTTGCAPCG 342 C C PC + C+PCG Sbjct: 22 CGPCGPCGSCCSPCG 36
>SOX10_CHICK (Q9W757) Transcription factor SOX-10 (cSOX10)| Length = 461 Score = 29.3 bits (64), Expect = 2.3 Identities = 17/51 (33%), Positives = 23/51 (45%), Gaps = 1/51 (1%) Frame = -3 Query: 401 PNPSATGAAAEGIGDGQVE-EPHGAQPVVQGAQERHQEAQAPAPGLHQGDG 252 P G A +G G+GQVE E GA + + H + + P G DG Sbjct: 169 PRRRKNGKATQGEGEGQVEGEAGGAASIQAHYKNAHLDHRHPGEGSPMSDG 219
>NCOR2_HUMAN (Q9Y618) Nuclear receptor corepressor 2 (N-CoR2) (Silencing mediator| of retinoic acid and thyroid hormone receptor) (SMRT) (SMRTe) (Thyroid-, retinoic-acid-receptor-associated corepressor) (T3 receptor-associating factor) (TRAC) (CTG repeat p Length = 2517 Score = 29.3 bits (64), Expect = 2.3 Identities = 14/41 (34%), Positives = 21/41 (51%) Frame = -3 Query: 377 AAEGIGDGQVEEPHGAQPVVQGAQERHQEAQAPAPGLHQGD 255 AA+G D + P G + ++A++PAPGL GD Sbjct: 2385 AADGRSDHTLTSPGGGGKAKVSGRPSSRKAKSPAPGLASGD 2425
>SNUT3_XENLA (Q6GLZ8) U4/U6.U5 tri-snRNP-associated protein 3| Length = 158 Score = 29.3 bits (64), Expect = 2.3 Identities = 19/72 (26%), Positives = 35/72 (48%) Frame = -1 Query: 406 RRRTPAQPEQQQKGSEMAKSKNHTAHNQSYKAHRNGIKKPKRQRQASTKGMDPKFLRNLR 227 RR A E++++ E ++S+ ++S HR + P+R R +S + P L++ R Sbjct: 16 RRSRSASRERERRRRERSRSRERR-RSRSRSPHRRRSRSPRRHRSSS---ISPSRLKDRR 71 Query: 226 YSRKHNVKAGEG 191 K K +G Sbjct: 72 DDDKKEPKESKG 83
>NKX31_HUMAN (Q99801) Homeobox protein Nkx-3.1| Length = 234 Score = 28.9 bits (63), Expect = 3.1 Identities = 22/79 (27%), Positives = 34/79 (43%), Gaps = 5/79 (6%) Frame = -1 Query: 400 RTPAQPEQQQKGSEMAKSKNHTAHNQSYKAHRNGIKKPKRQRQAS----TKGMDPKFLRN 233 R P P+Q QK S A S + +H+ + P+R A T+ + +N Sbjct: 115 RLPQTPKQPQKRSRAAFSHTQVIELERKFSHQKYLSAPERAHLAKNLKLTETQVKIWFQN 174 Query: 232 LRYSRKHNVKAGE-GEVEK 179 RY K + E G++EK Sbjct: 175 RRYKTKRKQLSSELGDLEK 193
>RBBP6_HUMAN (Q7Z6E9) Retinoblastoma-binding protein 6 (p53-associated cellular| protein of testis) (Proliferation potential-related protein) (Protein P2P-R) (Retinoblastoma-binding Q protein 1) (Protein RBQ-1) Length = 1792 Score = 28.9 bits (63), Expect = 3.1 Identities = 21/73 (28%), Positives = 36/73 (49%) Frame = -1 Query: 400 RTPAQPEQQQKGSEMAKSKNHTAHNQSYKAHRNGIKKPKRQRQASTKGMDPKFLRNLRYS 221 R+P P + + KS+N+ + ++S+ HR+ + P +R S + P+ R + Sbjct: 729 RSPPYPRRGR-----GKSRNYRSRSRSHGYHRSRSRSPPYRRYHS-RSRSPQAFRG-QSP 781 Query: 220 RKHNVKAGEGEVE 182 K NV GE E E Sbjct: 782 NKRNVPQGETERE 794
>Y3527_METJA (Q60286) Hypothetical protein MJECL27| Length = 162 Score = 28.9 bits (63), Expect = 3.1 Identities = 19/67 (28%), Positives = 30/67 (44%), Gaps = 1/67 (1%) Frame = -1 Query: 382 EQQQKGSEMAKSKNHTAHNQSYKAHRNGIKKPKRQRQASTKGMDPK-FLRNLRYSRKHNV 206 E++ K E KSKN+ K G K+PKR R+ + K ++ ++ K + Sbjct: 55 EKELKKLESQKSKNNGKKQTGQKKQGKGKKQPKRVRETCVSTQERKDYVLFFCHNHKVRL 114 Query: 205 KAGEGEV 185 GEV Sbjct: 115 HLANGEV 121
>UTP11_SCHPO (Q10106) Probable U3 small nucleolar RNA-associated protein 11 (U3| snoRNA-associated protein 11) Length = 249 Score = 28.9 bits (63), Expect = 3.1 Identities = 17/64 (26%), Positives = 31/64 (48%) Frame = -1 Query: 400 RTPAQPEQQQKGSEMAKSKNHTAHNQSYKAHRNGIKKPKRQRQASTKGMDPKFLRNLRYS 221 R AQP +++K + K K++ Q YK + KK KR R+ + + +F + + Sbjct: 15 RERAQPFERRKWGLLEKRKDYAQRAQDYKTKQ---KKLKRLREKALERNPDEFYHEMTHK 71 Query: 220 RKHN 209 + N Sbjct: 72 KTKN 75
>PRCC_HUMAN (Q92733) Proline-rich protein PRCC (Papillary renal cell carcinoma| translocation associated gene protein) Length = 491 Score = 28.9 bits (63), Expect = 3.1 Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 16/66 (24%) Frame = -3 Query: 404 PPNPSATGAAAEGIGDG---QVEEPHG----AQPVVQGA---------QERHQEAQAPAP 273 PP P + A A G+G+G + P G P + GA ++R + + AP Sbjct: 91 PPPPGVSPAEAAGVGEGLGLGLPSPRGPGLNLPPPIGGAGPPLGLPKPKKRKEPVKIAAP 150 Query: 272 GLHQGD 255 LH+GD Sbjct: 151 ELHKGD 156
>K0853_HUMAN (Q5T200) Protein KIAA0853| Length = 1668 Score = 28.9 bits (63), Expect = 3.1 Identities = 19/80 (23%), Positives = 36/80 (45%) Frame = -1 Query: 406 RRRTPAQPEQQQKGSEMAKSKNHTAHNQSYKAHRNGIKKPKRQRQASTKGMDPKFLRNLR 227 R R P PE+ +GS ++ +H++++ + + P+R R D R+ Sbjct: 564 RGRVPELPEKGSRGSRGSQIDSHSSNSNYHDSWETRSSYPERDRYPERDNRDQ--ARDSS 621 Query: 226 YSRKHNVKAGEGEVEK*DGR 167 + R+H GE ++ D R Sbjct: 622 FERRH------GERDRRDNR 635
>RRPL_HANTV (P23456) RNA-directed RNA polymerase (EC 2.7.7.48) (L protein)| Length = 2151 Score = 28.9 bits (63), Expect = 3.1 Identities = 15/40 (37%), Positives = 18/40 (45%), Gaps = 3/40 (7%) Frame = +3 Query: 264 VEAWRWRLGFLMPFLCALYDWLCAVWFFDLAIS---DPFC 374 +E WRW P+ DW A+WF D S D FC Sbjct: 1633 IEVWRWCKANSAPYR----DWFQALWFEDKTFSEWLDRFC 1668
>SNX41_CANAL (Q5AD73) Sorting nexin-41| Length = 681 Score = 28.9 bits (63), Expect = 3.1 Identities = 16/68 (23%), Positives = 27/68 (39%) Frame = -1 Query: 394 PAQPEQQQKGSEMAKSKNHTAHNQSYKAHRNGIKKPKRQRQASTKGMDPKFLRNLRYSRK 215 P P+QQQ+ + N+S ++H K P + + T P+ ++ K Sbjct: 35 PPPPQQQQQHQD----------NESKQSHTKSPKPPLQSIHSGTSNAHPQSQPQHKHKHK 84 Query: 214 HNVKAGEG 191 HN G Sbjct: 85 HNTSLNNG 92
>IF2_NEIG1 (Q5F797) Translation initiation factor IF-2| Length = 943 Score = 28.5 bits (62), Expect = 4.0 Identities = 13/47 (27%), Positives = 22/47 (46%) Frame = -1 Query: 394 PAQPEQQQKGSEMAKSKNHTAHNQSYKAHRNGIKKPKRQRQASTKGM 254 PA P+ E A+ + +AH+ + K K++RQA + M Sbjct: 204 PAVPQPVVSAEEQAQRDEEARRAAALRAHQEALLKEKQERQARREAM 250
>VP40_SCMVC (P16046) Capsid protein P40 [Contains: Assemblin (EC 3.4.21.97)| (Protease); Gene APNG.7 protein; Capsid assembly protein; Gene APNG.5 protein; Gene APNG.4 protein; C-terminal peptide] Length = 589 Score = 28.5 bits (62), Expect = 4.0 Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 3/51 (5%) Frame = -1 Query: 406 RRRTPAQPEQQQKGSEMA---KSKNHTAHNQSYKAHRNGIKKPKRQRQAST 263 RRR P E ++ E + +H +N S+ R+G K +R+R AS+ Sbjct: 387 RRRDPMMEEAERAAWERGYAPSAYDHYVNNGSWSRSRSGALKRRRERDASS 437
>ASRA_SALTY (P26474) Anaerobic sulfite reductase subunit A (Anaerobic sulfite| reductase iron-sulfur subunit) Length = 347 Score = 28.5 bits (62), Expect = 4.0 Identities = 11/19 (57%), Positives = 12/19 (63%) Frame = +1 Query: 283 AWAS*CRSCAPCTTGCAPC 339 A+ S C SC CTTGC C Sbjct: 225 AYDSRCISCGRCTTGCPTC 243
>IF2_NEIMB (Q9JYD2) Translation initiation factor IF-2| Length = 962 Score = 28.5 bits (62), Expect = 4.0 Identities = 13/47 (27%), Positives = 22/47 (46%) Frame = -1 Query: 394 PAQPEQQQKGSEMAKSKNHTAHNQSYKAHRNGIKKPKRQRQASTKGM 254 PA P+ E A+ + +AH+ + K K++RQA + M Sbjct: 223 PAVPQPVVSAEEQAQRDEEARRAAALRAHQEALLKEKQERQARREAM 269
>IF2_NEIMA (Q9JTB5) Translation initiation factor IF-2| Length = 962 Score = 28.5 bits (62), Expect = 4.0 Identities = 13/47 (27%), Positives = 22/47 (46%) Frame = -1 Query: 394 PAQPEQQQKGSEMAKSKNHTAHNQSYKAHRNGIKKPKRQRQASTKGM 254 PA P+ E A+ + +AH+ + K K++RQA + M Sbjct: 223 PAVPQPVVSAEEQAQRDEEARRAAALRAHQEALLKEKQERQARREAM 269
>RBBP6_MOUSE (P97868) Retinoblastoma-binding protein 6 (p53-associated cellular| protein of testis) (Proliferation potential-related protein) (Protein P2P-R) Length = 1790 Score = 28.5 bits (62), Expect = 4.0 Identities = 21/73 (28%), Positives = 36/73 (49%) Frame = -1 Query: 400 RTPAQPEQQQKGSEMAKSKNHTAHNQSYKAHRNGIKKPKRQRQASTKGMDPKFLRNLRYS 221 R+P P + + KS+N+ + ++S+ HR+ + P +R S + P+ R + Sbjct: 730 RSPPYPRRGR-----GKSRNYRSRSRSHGYHRSRSRSPPYRRYHS-RSRSPQAFRG-QSP 782 Query: 220 RKHNVKAGEGEVE 182 K NV GE E E Sbjct: 783 TKRNVPQGETERE 795
>SNX8_HUMAN (Q9Y5X2) Sorting nexin-8| Length = 465 Score = 28.1 bits (61), Expect = 5.2 Identities = 16/48 (33%), Positives = 21/48 (43%) Frame = -3 Query: 404 PPNPSATGAAAEGIGDGQVEEPHGAQPVVQGAQERHQEAQAPAPGLHQ 261 P +A GAAAE D + + P P Q + + Q PAP Q Sbjct: 8 PLPAAAVGAAAEAEADEEADPPASDLPTPQAIEPQAIVQQVPAPSRMQ 55
>PHOSP_NDVB (P24698) Phosphoprotein (Protein P)| Length = 395 Score = 28.1 bits (61), Expect = 5.2 Identities = 14/39 (35%), Positives = 20/39 (51%) Frame = -3 Query: 392 SATGAAAEGIGDGQVEEPHGAQPVVQGAQERHQEAQAPA 276 +A G +AE +G + PHG + A E+H Q PA Sbjct: 25 TAQGKSAETVGRSAI--PHGKTKALSAAWEKHGSIQPPA 61
>RRPL_SEOU8 (P27314) RNA-directed RNA polymerase (EC 2.7.7.48) (L protein)| Length = 2151 Score = 28.1 bits (61), Expect = 5.2 Identities = 12/34 (35%), Positives = 16/34 (47%) Frame = +3 Query: 264 VEAWRWRLGFLMPFLCALYDWLCAVWFFDLAISD 365 +E WRW P+ DW A+WF D S+ Sbjct: 1633 IEVWRWAKANNAPYR----DWFHALWFEDKTFSE 1662
>Y489_MYCBO (P64700) Hypothetical protein Mb0489c| Length = 348 Score = 27.7 bits (60), Expect = 6.8 Identities = 15/49 (30%), Positives = 23/49 (46%), Gaps = 4/49 (8%) Frame = -1 Query: 394 PAQPEQQQKGSEMAKSKNHTAHNQSYKAHR----NGIKKPKRQRQASTK 260 P QPEQQ + +A S HT + AH+ G+ + + A+ K Sbjct: 53 PTQPEQQPQTEHLAASHAHTRRSGRQAAHQAWDPTGLLAAQEEEPAAVK 101
>Y479_MYCTU (P64699) Hypothetical protein Rv0479c/MT0497| Length = 348 Score = 27.7 bits (60), Expect = 6.8 Identities = 15/49 (30%), Positives = 23/49 (46%), Gaps = 4/49 (8%) Frame = -1 Query: 394 PAQPEQQQKGSEMAKSKNHTAHNQSYKAHR----NGIKKPKRQRQASTK 260 P QPEQQ + +A S HT + AH+ G+ + + A+ K Sbjct: 53 PTQPEQQPQTEHLAASHAHTRRSGRQAAHQAWDPTGLLAAQEEEPAAVK 101
>S39A5_MOUSE (Q9D856) Zinc transporter ZIP5 precursor (Solute carrier family 39| member 5) Length = 535 Score = 27.7 bits (60), Expect = 6.8 Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 2/37 (5%) Frame = -3 Query: 362 GDGQVEEPHGA--QPVVQGAQERHQEAQAPAPGLHQG 258 G G V P A +P VQG +E Q + + AP HQG Sbjct: 332 GSGMVLRPLQAASEPEVQGQRENRQSSPSLAPPGHQG 368
>ADCY5_RAT (Q04400) Adenylate cyclase type 5 (EC 4.6.1.1) (Adenylate cyclase| type V) (ATP pyrophosphate-lyase 5) (Adenylyl cyclase 5) Length = 1262 Score = 27.7 bits (60), Expect = 6.8 Identities = 26/115 (22%), Positives = 51/115 (44%), Gaps = 18/115 (15%) Frame = -1 Query: 343 NHTAHNQ-SYKAHRNGIKKPKRQRQAST------------KGMDPKFLRNLR--YSRKHN 209 NH NQ S + R G + PK + + + +D + + LR + RK Sbjct: 683 NHLGGNQVSKEMKRMGFEDPKDKNAQESANPEDEVDEFLGRAIDARSIDRLRSEHVRKFL 742 Query: 208 VKAGEGEVEK*DGRV---SAGRYVSCIARISTVLNLIQCSV*PKDIYVVT*VLSC 53 + E ++EK + G YV+C + + + +Q ++ P +++++ LSC Sbjct: 743 LTFREPDLEKKYSKQVDDRFGAYVACASLVFLFICFVQITIVPHSLFMLSFYLSC 797
>MEPE_HUMAN (Q9NQ76) Matrix extracellular phosphoglycoprotein precursor| (Osteoblast/osteocyte factor 45) (OF45) Length = 525 Score = 27.7 bits (60), Expect = 6.8 Identities = 12/38 (31%), Positives = 19/38 (50%) Frame = -1 Query: 403 RRTPAQPEQQQKGSEMAKSKNHTAHNQSYKAHRNGIKK 290 ++ P + Q QK +KS + HN Y H + +KK Sbjct: 194 KKKPQRDSQAQKSPVKSKSTHRIQHNIDYLKHLSKVKK 231
>NCOR2_MOUSE (Q9WU42) Nuclear receptor corepressor 2 (N-CoR2) (Silencing mediator| of retinoic acid and thyroid hormone receptor) (SMRT) (SMRTe) (Thyroid-, retinoic-acid-receptor-associated corepressor) (T3 receptor-associating factor) (TRAC) Length = 2472 Score = 27.7 bits (60), Expect = 6.8 Identities = 13/40 (32%), Positives = 20/40 (50%) Frame = -3 Query: 374 AEGIGDGQVEEPHGAQPVVQGAQERHQEAQAPAPGLHQGD 255 A+G D + P G + ++A++PAPGL GD Sbjct: 2341 ADGRSDHALTSPGGGGKAKVSGRPSSRKAKSPAPGLASGD 2380
>MS84A_DROME (Q01642) Male-specific sperm protein Mst84Da| Length = 63 Score = 27.7 bits (60), Expect = 6.8 Identities = 8/14 (57%), Positives = 8/14 (57%) Frame = +1 Query: 298 CRSCAPCTTGCAPC 339 C C PC GC PC Sbjct: 26 CGGCGPCCGGCGPC 39
>BRD2_HUMAN (P25440) Bromodomain-containing protein 2 (RING3 protein) (O27.1.1)| Length = 801 Score = 27.7 bits (60), Expect = 6.8 Identities = 19/80 (23%), Positives = 33/80 (41%), Gaps = 10/80 (12%) Frame = -1 Query: 388 QPEQQQKGSEMAKSKNH----------TAHNQSYKAHRNGIKKPKRQRQASTKGMDPKFL 239 + E++ + S+ + + H H Q + I KPKR+R+ K Sbjct: 502 EEEEESESSDSEEERAHRLAELQEQLRAVHEQLAALSQGPISKPKRKREKKEK------- 554 Query: 238 RNLRYSRKHNVKAGEGEVEK 179 + R + KH +AG E +K Sbjct: 555 KKKRKAEKHRGRAGADEDDK 574
>TOIP2_RAT (Q6P752) Torsin-1A-interacting protein 2| Length = 578 Score = 27.7 bits (60), Expect = 6.8 Identities = 14/47 (29%), Positives = 22/47 (46%) Frame = -3 Query: 392 SATGAAAEGIGDGQVEEPHGAQPVVQGAQERHQEAQAPAPGLHQGDG 252 S++ A EG G+G + H +E H E+ + AP G+G Sbjct: 187 SSSAAPTEGAGEGGEADVHLESSSAVPPEEAHLESSSAAPSEGAGEG 233
>ADCY5_MOUSE (P84309) Adenylate cyclase type 5 (EC 4.6.1.1) (Adenylate cyclase| type V) (ATP pyrophosphate-lyase 5) (Adenylyl cyclase 5) (Fragment) Length = 795 Score = 27.7 bits (60), Expect = 6.8 Identities = 26/115 (22%), Positives = 51/115 (44%), Gaps = 18/115 (15%) Frame = -1 Query: 343 NHTAHNQ-SYKAHRNGIKKPKRQRQAST------------KGMDPKFLRNLR--YSRKHN 209 NH NQ S + R G + PK + + + +D + + LR + RK Sbjct: 216 NHLGGNQVSKEMKRMGFEDPKDKNAQESANPEDEVDEFLGRAIDARSIDRLRSEHVRKFL 275 Query: 208 VKAGEGEVEK*DGRV---SAGRYVSCIARISTVLNLIQCSV*PKDIYVVT*VLSC 53 + E ++EK + G YV+C + + + +Q ++ P +++++ LSC Sbjct: 276 LTFREPDLEKKYSKQVDDRFGAYVACASLVFLFICFVQITIVPHSLFMLSFYLSC 330
>ZN292_HUMAN (O60281) Zinc finger protein 292| Length = 1969 Score = 27.7 bits (60), Expect = 6.8 Identities = 14/45 (31%), Positives = 20/45 (44%) Frame = -1 Query: 406 RRRTPAQPEQQQKGSEMAKSKNHTAHNQSYKAHRNGIKKPKRQRQ 272 RR TP Q K ++ H S + + GIK PK +R+ Sbjct: 1539 RRLTPGQENMSSKANQEKSKSKHRGTKHS-RCGKEGIKMPKTKRK 1582
>ODFP_MOUSE (Q61999) Outer dense fiber protein| Length = 247 Score = 27.7 bits (60), Expect = 6.8 Identities = 10/16 (62%), Positives = 10/16 (62%), Gaps = 1/16 (6%) Frame = +1 Query: 298 CRSCAPCTTG-CAPCG 342 C CAPC G C PCG Sbjct: 204 CSPCAPCACGPCGPCG 219
>SYK_RHILO (Q98BC8) Lysyl-tRNA synthetase (EC 6.1.1.6) (Lysine--tRNA ligase)| (LysRS) Length = 548 Score = 27.7 bits (60), Expect = 6.8 Identities = 18/64 (28%), Positives = 28/64 (43%) Frame = +3 Query: 99 EHWIKFKTVEILAIHETYRPAETRPSYFSTSPSPAFTLCFLEYLRFLRNFGSIPLVEAWR 278 + W+ + E L ++ RP + + YF P EY FL G+ P + W+ Sbjct: 312 DEWLTYAPTESLGLYMYQRPRQAKKLYFDVIPRAVD-----EYYTFL---GAYPR-QDWK 362 Query: 279 WRLG 290 RLG Sbjct: 363 ERLG 366
>RNAS6_MIOTA (O46531) Ribonuclease K6 precursor (EC 3.1.27.-) (RNase K6)| Length = 150 Score = 27.7 bits (60), Expect = 6.8 Identities = 21/83 (25%), Positives = 34/83 (40%) Frame = -1 Query: 388 QPEQQQKGSEMAKSKNHTAHNQSYKAHRNGIKKPKRQRQASTKGMDPKFLRNLRYSRKHN 209 QP Q M+ N+T H + H+N + Q A+ + +N R+HN Sbjct: 40 QPSPLQCNRAMSGINNYTQHCK----HQNTFRHDSFQNVAAVCDLLSIICKN----RQHN 91 Query: 208 VKAGEGEVEK*DGRVSAGRYVSC 140 V D R+++G+Y C Sbjct: 92 CHQSSKPVNMTDCRLTSGKYPQC 114
>CLDND_HUMAN (Q9NY35) Claudin domain-containing protein 1 (Membrane protein| GENX-3745) Length = 253 Score = 27.3 bits (59), Expect = 8.9 Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 3/56 (5%) Frame = +3 Query: 150 YRPAETRPSYFSTSPSPAFTLC--FLEYLRFLRNFGS-IPLVEAWRWRLGFLMPFL 308 Y P E S+ + +FTL F+E N S I L+ + WR FL+PF+ Sbjct: 91 YSPPERTESFDVVTKCVSFTLTEQFMEKFVDPGNHNSGIDLLRTYLWRCQFLLPFV 146
>CWC25_EMENI (Q5B0I1) Pre-mRNA-splicing factor cwc25| Length = 415 Score = 27.3 bits (59), Expect = 8.9 Identities = 16/73 (21%), Positives = 28/73 (38%) Frame = -1 Query: 406 RRRTPAQPEQQQKGSEMAKSKNHTAHNQSYKAHRNGIKKPKRQRQASTKGMDPKFLRNLR 227 R R + Q++ E + N S+++HR+ + R R + D + Sbjct: 164 REREQGRERHQERERERGHRHRRDSGNDSHRSHRHRRRSRSRSRSPRVEKDDRRHRDREH 223 Query: 226 YSRKHNVKAGEGE 188 R H + GE E Sbjct: 224 DRRSHRDRDGERE 236
>YX23_CAEEL (Q11194) Hypothetical protein C04E7.3| Length = 518 Score = 27.3 bits (59), Expect = 8.9 Identities = 20/56 (35%), Positives = 26/56 (46%), Gaps = 1/56 (1%) Frame = -1 Query: 367 GSEMA-KSKNHTAHNQSYKAHRNGIKKPKRQRQASTKGMDPKFLRNLRYSRKHNVK 203 GSEMA K N +S N + K+ +D FLRN RYS+ N+K Sbjct: 313 GSEMALKRDNDRYQRRSQLKTANNRELAKKMMSMERNEVD--FLRNARYSKHGNLK 366
>STNB_CAEEL (P90761) Putative stoned B-like protein (Unc-41)| Length = 1657 Score = 27.3 bits (59), Expect = 8.9 Identities = 15/48 (31%), Positives = 24/48 (50%) Frame = +3 Query: 93 HTEHWIKFKTVEILAIHETYRPAETRPSYFSTSPSPAFTLCFLEYLRF 236 +TE WI+F+ +E +I +P + + SP CF E +RF Sbjct: 1317 YTERWIRFEALEFHSI--VNKPEFDKEQVIAFSPPDG---CFFEIMRF 1359
>ADCY5_HUMAN (O95622) Adenylate cyclase type 5 (EC 4.6.1.1) (Adenylate cyclase| type V) (ATP pyrophosphate-lyase 5) (Adenylyl cyclase 5) (Fragment) Length = 894 Score = 27.3 bits (59), Expect = 8.9 Identities = 26/115 (22%), Positives = 51/115 (44%), Gaps = 18/115 (15%) Frame = -1 Query: 343 NHTAHNQ-SYKAHRNGIKKPKRQRQAST------------KGMDPKFLRNLR--YSRKHN 209 NH NQ S + R G + PK + + + +D + + LR + RK Sbjct: 315 NHLGGNQVSKEMKRMGFEDPKDKNAQESANPEDEVDEFLGRAIDARSIDRLRSEHVRKFL 374 Query: 208 VKAGEGEVEK*DGRV---SAGRYVSCIARISTVLNLIQCSV*PKDIYVVT*VLSC 53 + E ++EK + G YV+C + + + +Q ++ P I++++ L+C Sbjct: 375 LTFREPDLEKKYSKQVDDRFGAYVACASLVFLFICFVQITIVPHSIFMLSFYLTC 429
>BRD2_CANFA (Q5TJG6) Bromodomain-containing protein 2| Length = 803 Score = 27.3 bits (59), Expect = 8.9 Identities = 19/80 (23%), Positives = 33/80 (41%), Gaps = 10/80 (12%) Frame = -1 Query: 388 QPEQQQKGSEMAKSKNH----------TAHNQSYKAHRNGIKKPKRQRQASTKGMDPKFL 239 + E++ + S+ + + H H Q + I KPKR+R+ K Sbjct: 503 EEEEESESSDSEEERAHRLAELQEQLRAVHEQLAALSQGPISKPKRKREKKEK------- 555 Query: 238 RNLRYSRKHNVKAGEGEVEK 179 + R + KH +AG E +K Sbjct: 556 KKKRKAEKHRGRAGVDEDDK 575
>YR871_MIMIV (Q5UP41) Hypothetical protein R871| Length = 561 Score = 27.3 bits (59), Expect = 8.9 Identities = 16/62 (25%), Positives = 28/62 (45%), Gaps = 4/62 (6%) Frame = -1 Query: 379 QQQKGSEMAKS-KNHTAHNQSYKAHRNGIKKPKRQRQAS---TKGMDPKFLRNLRYSRKH 212 + K S+ KS K H +H + K+H+ + P R S + D + + YSR Sbjct: 156 KHDKSSKRDKSSKRHKSHKKKDKSHKKRYRSPSSDRSLSRDRSSSRDRSYKKRRLYSRDR 215 Query: 211 NV 206 ++ Sbjct: 216 SL 217 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 48,910,959 Number of Sequences: 219361 Number of extensions: 938321 Number of successful extensions: 3688 Number of sequences better than 10.0: 61 Number of HSP's better than 10.0 without gapping: 3427 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3675 length of database: 80,573,946 effective HSP length: 110 effective length of database: 56,444,236 effective search space used: 1354661664 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
