ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal17j20
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC022884.12| Homo sapiens chromosome 18, clone RP11-449D8, co... 42 1.7
2gb|AC073856.17| Homo sapiens 3 BAC RP11-938G16 (Roswell Park Can... 42 1.7
3gb|AF426173.1| Cavia porcellus neurokinin 3 receptor (NK3R) mRNA... 42 1.7
4gb|AF255393.1|AF255393 Cavia porcellus neurokinin B receptor (NK... 42 1.7
5gb|AF255392.1|AF255392 Cavia porcellus neurokinin B receptor (NK... 42 1.7
6gb|M84605.1|HUMOPIODRE Human putative opioid receptor mRNA, comp... 42 1.7
7gb|AC153357.4| Mus musculus BAC clone RP24-124N8 from chromosome... 40 6.6
8gb|AC162122.3| Colobus guereza clone CH272-461I5, complete sequence 40 6.6
9ref|XM_414665.1| PREDICTED: Gallus gallus similar to transcripti... 40 6.6
10gb|AC138730.4| Pongo pygmaeus clone CH253-348D22, complete sequence 40 6.6
11gb|AC123552.4| Mus musculus chromosome 7 clone RP24-396I18, comp... 40 6.6
12gb|AC123537.3| Macaca mulatta clone CH250-75G11, complete sequence 40 6.6
13emb|AL590866.9| Human DNA sequence from clone RP11-356B3 on chro... 40 6.6
14emb|AL450312.10| Human DNA sequence from clone RP11-138L24 on ch... 40 6.6
15emb|AL450343.4| Human DNA sequence from clone RP11-152M12 on chr... 40 6.6
16emb|AL354774.17| Human DNA sequence from clone RP11-67L17 on chr... 40 6.6
17emb|AL939121.1|SCO939121 Streptomyces coelicolor A3(2) complete ... 40 6.6
18gb|AC010615.9| Homo sapiens chromosome 19 clone CTD-2561J22, com... 40 6.6
19gb|AC117397.2| Homo sapiens 3 BAC RP11-92D20 (Roswell Park Cance... 40 6.6
20gb|CP000240.1| Synechococcus sp. JA-2-3B'a(2-13), complete genome 40 6.6
21gb|AC103584.15| Bos taurus clone rp42-51p13, complete sequence 40 6.6
22gb|AC118139.3| Homo sapiens BAC clone RP11-461K12 from 4, comple... 40 6.6
23gb|AC022889.8| Homo sapiens chromosome 15, clone RP11-492D5, com... 40 6.6
24gb|AC104420.2| Homo sapiens chromosome 15, clone RP11-945A13, co... 40 6.6
25gb|AC068397.6| Homo sapiens chromosome 15, clone RP11-272D12, co... 40 6.6
26gb|AC182810.1| Gasterosteus aculeatus clone VMRC28-119K03, compl... 40 6.6
27gb|AY525414.1| Methylocystis sp. LW2 methylene tetrahydromethano... 40 6.6
28gb|DP000005.1| Macaca mulatta target 1 genomic scaffold 40 6.6
29gb|AC158384.2| Mus musculus BAC clone RP24-97I24 from chromosome... 40 6.6
30gb|AC154772.2| Mus musculus BAC clone RP24-448H7 from chromosome... 40 6.6
31dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.6
32gb|DP000025.1| Gorilla gorilla gorilla target 1 genomic scaffold 40 6.6
33gb|DP000026.1| Pongo pygmaeus target 1 genomic scaffold 40 6.6
34gb|AC012508.10| Homo sapiens BAC clone RP11-521O16 from 2, compl... 40 6.6
35gb|AC069145.5|AC069145 Oryza sativa chromosome 10 BAC OSJNBb0094... 40 6.6
36ref|XM_219680.3| PREDICTED: Rattus norvegicus family with sequen... 40 6.6
37gb|AC090652.32| Mus musculus strain C57BL/6J chromosome 7 clone ... 40 6.6
38gb|AC064841.3| Homo sapiens BAC clone CTD-2015A10 from 2, comple... 40 6.6
39dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 40 6.6
40gb|AC006196.3|AC006196 Homo sapiens, clone hRPK.1_A_1, complete ... 40 6.6
41emb|BX537835.1|HSM805929 Homo sapiens mRNA; cDNA DKFZp686K1836 (... 40 6.6
42emb|Z84492.2|HSLUCA11 Human DNA sequence from clone XXcos-11 on ... 40 6.6
43gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 40 6.6
44gb|U12585.1|CGU12585 Cricetinae gen. sp. beta-cell E-box transcr... 40 6.6 
>gb|AC022884.12| Homo sapiens chromosome 18, clone RP11-449D8, complete sequence
          Length = 195139

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 223   tggcatgcagcaggcagggag 243
             |||||||||||||||||||||
Sbjct: 85808 tggcatgcagcaggcagggag 85788
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>gb|AC073856.17| Homo sapiens 3 BAC RP11-938G16 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 177363

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 167   ttcaggttttgtttttcttctcctt 191
             |||||||||| ||||||||||||||
Sbjct: 38806 ttcaggttttctttttcttctcctt 38830
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>gb|AF426173.1| Cavia porcellus neurokinin 3 receptor (NK3R) mRNA, complete cds
          Length = 1709

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 279 gctgggggtggccgccgccgg 299
           |||||||||||||||||||||
Sbjct: 111 gctgggggtggccgccgccgg 131
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>gb|AF255393.1|AF255393 Cavia porcellus neurokinin B receptor (NK3) mRNA, complete cds
          Length = 1550

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 279 gctgggggtggccgccgccgg 299
           |||||||||||||||||||||
Sbjct: 106 gctgggggtggccgccgccgg 126
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>gb|AF255392.1|AF255392 Cavia porcellus neurokinin B receptor (NK3) gene, exon 1 and
           partial cds
          Length = 1339

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 279 gctgggggtggccgccgccgg 299
           |||||||||||||||||||||
Sbjct: 536 gctgggggtggccgccgccgg 556
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>gb|M84605.1|HUMOPIODRE Human putative opioid receptor mRNA, complete cds
          Length = 4839

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 279 gctgggggtggccgccgccgg 299
           |||||||||||||||||||||
Sbjct: 131 gctgggggtggccgccgccgg 151
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>gb|AC153357.4| Mus musculus BAC clone RP24-124N8 from chromosome 10, complete sequence
          Length = 189789

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 172   gttttgtttttcttctcctt 191
             ||||||||||||||||||||
Sbjct: 35535 gttttgtttttcttctcctt 35554
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>gb|AC162122.3| Colobus guereza clone CH272-461I5, complete sequence
          Length = 192356

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 166    gttcaggttttgtttttctt 185
              ||||||||||||||||||||
Sbjct: 159337 gttcaggttttgtttttctt 159356
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>ref|XM_414665.1| PREDICTED: Gallus gallus similar to transcription elongation
            regulator 1; transcription factor CA150; TATA box binding
            protein (TBP)-associated factor, RNA polymerase II, S,
            150kD; TATA box-binding protein-associated factor 2S
            (LOC416349), mRNA
          Length = 3378

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 173  ttttgtttttcttctccttg 192
            ||||||||||||||||||||
Sbjct: 2254 ttttgtttttcttctccttg 2235
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>gb|AC138730.4| Pongo pygmaeus clone CH253-348D22, complete sequence
          Length = 203598

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 166    gttcaggttttgtttttctt 185
              ||||||||||||||||||||
Sbjct: 195423 gttcaggttttgtttttctt 195442
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>gb|AC123552.4| Mus musculus chromosome 7 clone RP24-396I18, complete sequence
          Length = 170951

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 225   gcatgcagcaggcagggagc 244
             ||||||||||||||||||||
Sbjct: 89640 gcatgcagcaggcagggagc 89621



 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 225   gcatgcagcaggcagggagc 244
             ||||||||||||||||||||
Sbjct: 89593 gcatgcagcaggcagggagc 89574



 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 225   gcatgcagcaggcagggagc 244
             ||||||||||||||||||||
Sbjct: 89522 gcatgcagcaggcagggagc 89503



 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 225   gcatgcagcaggcagggagc 244
             ||||||||||||||||||||
Sbjct: 89475 gcatgcagcaggcagggagc 89456



 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 225   gcatgcagcaggcagggagc 244
             ||||||||||||||||||||
Sbjct: 89380 gcatgcagcaggcagggagc 89361



 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 225   gcatgcagcaggcagggagc 244
             ||||||||||||||||||||
Sbjct: 89357 gcatgcagcaggcagggagc 89338
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>gb|AC123537.3| Macaca mulatta clone CH250-75G11, complete sequence
          Length = 172942

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 166    gttcaggttttgtttttctt 185
              ||||||||||||||||||||
Sbjct: 113814 gttcaggttttgtttttctt 113833
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>emb|AL590866.9| Human DNA sequence from clone RP11-356B3 on chromosome 6, complete
             sequence
          Length = 76158

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 461   catgtgcagcagcagcttgg 480
             ||||||||||||||||||||
Sbjct: 69047 catgtgcagcagcagcttgg 69028
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>emb|AL450312.10| Human DNA sequence from clone RP11-138L24 on chromosome 9, complete
              sequence
          Length = 164559

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 224    ggcatgcagcaggcagggag 243
              ||||||||||||||||||||
Sbjct: 156060 ggcatgcagcaggcagggag 156041
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>emb|AL450343.4| Human DNA sequence from clone RP11-152M12 on chromosome 6, complete
             sequence
          Length = 22205

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 172   gttttgtttttcttctcctt 191
             ||||||||||||||||||||
Sbjct: 17265 gttttgtttttcttctcctt 17246
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>emb|AL354774.17| Human DNA sequence from clone RP11-67L17 on chromosome 13, complete
             sequence
          Length = 125693

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 245   ctcacttccagggcatgctg 264
             ||||||||||||||||||||
Sbjct: 85128 ctcacttccagggcatgctg 85109
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>emb|AL939121.1|SCO939121 Streptomyces coelicolor A3(2) complete genome; segment 18/29
          Length = 292100

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 291    cgccgccgggacgccctggt 310
              ||||||||||||||||||||
Sbjct: 190836 cgccgccgggacgccctggt 190855
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>gb|AC010615.9| Homo sapiens chromosome 19 clone CTD-2561J22, complete sequence
          Length = 215962

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 169    caggttttgtttttcttctc 188
              ||||||||||||||||||||
Sbjct: 158500 caggttttgtttttcttctc 158519
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>gb|AC117397.2| Homo sapiens 3 BAC RP11-92D20 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 128398

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 167   ttcaggttttgtttttcttc 186
             ||||||||||||||||||||
Sbjct: 71162 ttcaggttttgtttttcttc 71181
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>gb|CP000240.1| Synechococcus sp. JA-2-3B'a(2-13), complete genome
          Length = 3046682

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 436     atcttcggtggcgcggatgc 455
               ||||||||||||||||||||
Sbjct: 2771829 atcttcggtggcgcggatgc 2771848
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>gb|AC103584.15| Bos taurus clone rp42-51p13, complete sequence
          Length = 177017

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 240    ggagcctcacttccagggca 259
              ||||||||||||||||||||
Sbjct: 161563 ggagcctcacttccagggca 161544
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>gb|AC118139.3| Homo sapiens BAC clone RP11-461K12 from 4, complete sequence
          Length = 54171

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 245   ctcacttccagggcatgctg 264
             ||||||||||||||||||||
Sbjct: 39145 ctcacttccagggcatgctg 39164
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>gb|AC022889.8| Homo sapiens chromosome 15, clone RP11-492D5, complete sequence
          Length = 108652

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 172   gttttgtttttcttctcctt 191
             ||||||||||||||||||||
Sbjct: 74925 gttttgtttttcttctcctt 74944
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>gb|AC104420.2| Homo sapiens chromosome 15, clone RP11-945A13, complete sequence
          Length = 178756

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 172    gttttgtttttcttctcctt 191
              ||||||||||||||||||||
Sbjct: 177631 gttttgtttttcttctcctt 177650
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>gb|AC068397.6| Homo sapiens chromosome 15, clone RP11-272D12, complete sequence
          Length = 169892

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 172   gttttgtttttcttctcctt 191
             ||||||||||||||||||||
Sbjct: 55869 gttttgtttttcttctcctt 55888
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>gb|AC182810.1| Gasterosteus aculeatus clone VMRC28-119K03, complete sequence
          Length = 131913

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 164    tagttcaggttttgtttttc 183
              ||||||||||||||||||||
Sbjct: 122471 tagttcaggttttgtttttc 122490
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>gb|AY525414.1| Methylocystis sp. LW2 methylene tetrahydromethanopterin
           dehydrogenase (mtdB) gene, partial cds
          Length = 512

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 432 cgtcatcttcggtggcgcgg 451
           ||||||||||||||||||||
Sbjct: 201 cgtcatcttcggtggcgcgg 220
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>gb|DP000005.1| Macaca mulatta target 1 genomic scaffold
          Length = 1678549

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 166     gttcaggttttgtttttctt 185
               ||||||||||||||||||||
Sbjct: 1550293 gttcaggttttgtttttctt 1550312
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>gb|AC158384.2| Mus musculus BAC clone RP24-97I24 from chromosome 9, complete sequence
          Length = 163817

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 114   ctaaataaacagtctggacc 133
             ||||||||||||||||||||
Sbjct: 72702 ctaaataaacagtctggacc 72721
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>gb|AC154772.2| Mus musculus BAC clone RP24-448H7 from chromosome 16, complete sequence
          Length = 169374

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 173   ttttgtttttcttctccttgagag 196
             ||||| ||||||||||||||||||
Sbjct: 69161 ttttgcttttcttctccttgagag 69138
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 225      gcatgcagcaggcagggagc 244
                ||||||||||||||||||||
Sbjct: 17042533 gcatgcagcaggcagggagc 17042514
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>gb|DP000025.1| Gorilla gorilla gorilla target 1 genomic scaffold
          Length = 1787293

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 166     gttcaggttttgtttttctt 185
               ||||||||||||||||||||
Sbjct: 1538444 gttcaggttttgtttttctt 1538463
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>gb|DP000026.1| Pongo pygmaeus target 1 genomic scaffold
          Length = 1819346

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 166     gttcaggttttgtttttctt 185
               ||||||||||||||||||||
Sbjct: 1547812 gttcaggttttgtttttctt 1547831
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>gb|AC012508.10| Homo sapiens BAC clone RP11-521O16 from 2, complete sequence
          Length = 185967

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 253    cagggcatgctggacaggcc 272
              ||||||||||||||||||||
Sbjct: 115888 cagggcatgctggacaggcc 115869
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>gb|AC069145.5|AC069145 Oryza sativa chromosome 10 BAC OSJNBb0094K03 genomic sequence, complete
             sequence
          Length = 135216

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 225   gcatgcagcaggcagggagc 244
             ||||||||||||||||||||
Sbjct: 83025 gcatgcagcaggcagggagc 83006
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>ref|XM_219680.3| PREDICTED: Rattus norvegicus family with sequence similarity 18,
            member B (predicted) (Fam18b_predicted), mRNA
          Length = 1614

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 263  tggacaggccgctgttgctg 282
            ||||||||||||||||||||
Sbjct: 1172 tggacaggccgctgttgctg 1191
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>gb|AC090652.32| Mus musculus strain C57BL/6J chromosome 7 clone rp23-116a10, complete
             sequence
          Length = 228147

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 225   gcatgcagcaggcagggagc 244
             ||||||||||||||||||||
Sbjct: 98151 gcatgcagcaggcagggagc 98170



 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 225   gcatgcagcaggcagggagc 244
             ||||||||||||||||||||
Sbjct: 98128 gcatgcagcaggcagggagc 98147



 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 225   gcatgcagcaggcagggagc 244
             ||||||||||||||||||||
Sbjct: 98033 gcatgcagcaggcagggagc 98052



 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 225   gcatgcagcaggcagggagc 244
             ||||||||||||||||||||
Sbjct: 97986 gcatgcagcaggcagggagc 98005



 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 225   gcatgcagcaggcagggagc 244
             ||||||||||||||||||||
Sbjct: 97915 gcatgcagcaggcagggagc 97934



 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 225   gcatgcagcaggcagggagc 244
             ||||||||||||||||||||
Sbjct: 97868 gcatgcagcaggcagggagc 97887
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>gb|AC064841.3| Homo sapiens BAC clone CTD-2015A10 from 2, complete sequence
          Length = 69829

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 181   ttcttctccttgagagttct 200
             ||||||||||||||||||||
Sbjct: 60298 ttcttctccttgagagttct 60279
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>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 424     aagctcggcgtcatcttcgg 443
               ||||||||||||||||||||
Sbjct: 2044764 aagctcggcgtcatcttcgg 2044783
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>gb|AC006196.3|AC006196 Homo sapiens, clone hRPK.1_A_1, complete sequence
          Length = 181949

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 170    aggttttgtttttcttctcc 189
              ||||||||||||||||||||
Sbjct: 107046 aggttttgtttttcttctcc 107027
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>emb|BX537835.1|HSM805929 Homo sapiens mRNA; cDNA DKFZp686K1836 (from clone DKFZp686K1836)
          Length = 3468

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 169  caggttttgtttttcttctc 188
            ||||||||||||||||||||
Sbjct: 3356 caggttttgtttttcttctc 3375
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>emb|Z84492.2|HSLUCA11 Human DNA sequence from clone XXcos-11 on chromosome 3 Contains the 3'
             part of the gene for calcium channel, voltage-dependent, L
             type, alpha 2D subunit (KIAA0558) and the first exon of
             the gene for PL6 protein (deleted in Small Cell Lung
             Carcinoma). Contains ESTs, GSSs and a putative CpG island,
             complete sequence
          Length = 27844

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 229   gcagcaggcagggagcctca 248
             ||||||||||||||||||||
Sbjct: 19262 gcagcaggcagggagcctca 19281
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 225      gcatgcagcaggcagggagc 244
                ||||||||||||||||||||
Sbjct: 17051573 gcatgcagcaggcagggagc 17051554
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>gb|U12585.1|CGU12585 Cricetinae gen. sp. beta-cell E-box transcription activator 1 (BETA1)
            mRNA, partial cds
          Length = 1640

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 172  gttttgtttttcttctcctt 191
            ||||||||||||||||||||
Sbjct: 1438 gttttgtttttcttctcctt 1419


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,411,397
Number of Sequences: 3902068
Number of extensions: 4411397
Number of successful extensions: 97626
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 97270
Number of HSP's gapped (non-prelim): 356
length of query: 491
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 469
effective length of database: 17,147,199,772
effective search space: 8042036693068
effective search space used: 8042036693068
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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