ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaal17i23 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK122067.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033117D10, full insert sequence Length = 893 Score = 394 bits (199), Expect = e-106 Identities = 328/367 (89%), Gaps = 3/367 (0%) Strand = Plus / Minus Query: 175 atctccagtttgttctttaccaaccaaatggcactagattgctggctaaagtatgatggg 234 ||||||||||||||||| | ||| ||||||||| | |||| |||||||| |||| ||| Sbjct: 699 atctccagtttgttctt-atcaagcaaatggcatttgattaa-ggctaaagcatgacggg 642 Query: 235 ttattacatcaagagcagcatggggttgtcatgcaccactggcgtacagacgggtccact 294 ||||||||||| ||| |||| ||||| | ||||||| ||||| ||||| || ||||||| Sbjct: 641 ttattacatcacgagaggcattgggtttt-atgcaccgctggcatacaggcgagtccact 583 Query: 295 ccttcgctgtttcaacagcttctgcctcattggatttccagtgcttggcaatgttttcag 354 |||| |||||||||||||||||||| ||||||| |||||||||||| |||||||| |||| Sbjct: 582 cctttgctgtttcaacagcttctgcttcattggctttccagtgctttgcaatgttatcag 523 Query: 355 agagagggtcatctggatttggtgcacttaagagtgcctggatactcaaaagaactgttc 414 ||||||| ||||| || ||||||||||||| ||||||||||||||||||||||||||| | Sbjct: 522 agagaggatcatcagggtttggtgcacttaggagtgcctggatactcaaaagaactgtcc 463 Query: 415 gaatctgaagagccggactccatttatccttgagaatgtcaaggcatatcctaccaagct 474 |||||||||| || || |||||||| |||||||||||||||||||||||||||||||||| Sbjct: 462 gaatctgaagggctgggctccatttgtccttgagaatgtcaaggcatatcctaccaagct 403 Query: 475 tgtcaatgttgggatgatatattttggtcagaaacctaacctttggggcagccatcggat 534 ||||||||||||| || |||||||||||||| |||||||||||||| |||||||| |||| Sbjct: 402 tgtcaatgttggggtggtatattttggtcaggaacctaacctttggagcagccataggat 343 Query: 535 attcctc 541 ||||||| Sbjct: 342 attcctc 336 Score = 48.1 bits (24), Expect = 0.030 Identities = 27/28 (96%) Strand = Plus / Minus Query: 80 ggtgccccagggtaaagggaaccaacca 107 ||||||| |||||||||||||||||||| Sbjct: 785 ggtgccctagggtaaagggaaccaacca 758
>ref|NM_191984.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 462 Score = 367 bits (185), Expect = 3e-98 Identities = 254/277 (91%) Strand = Plus / Minus Query: 265 atgcaccactggcgtacagacgggtccactccttcgctgtttcaacagcttctgcctcat 324 ||||||| ||||| ||||| || ||||||||||| |||||||||||||||||||| |||| Sbjct: 460 atgcaccgctggcatacaggcgagtccactcctttgctgtttcaacagcttctgcttcat 401 Query: 325 tggatttccagtgcttggcaatgttttcagagagagggtcatctggatttggtgcactta 384 ||| |||||||||||| |||||||| ||||||||||| ||||| || ||||||||||||| Sbjct: 400 tggctttccagtgctttgcaatgttatcagagagaggatcatcagggtttggtgcactta 341 Query: 385 agagtgcctggatactcaaaagaactgttcgaatctgaagagccggactccatttatcct 444 ||||||||||||||||||||||||||| ||||||||||| || || |||||||| |||| Sbjct: 340 ggagtgcctggatactcaaaagaactgtccgaatctgaagggctgggctccatttgtcct 281 Query: 445 tgagaatgtcaaggcatatcctaccaagcttgtcaatgttgggatgatatattttggtca 504 ||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| Sbjct: 280 tgagaatgtcaaggcatatcctaccaagcttgtcaatgttggggtggtatattttggtca 221 Query: 505 gaaacctaacctttggggcagccatcggatattcctc 541 | |||||||||||||| |||||||| ||||||||||| Sbjct: 220 ggaacctaacctttggagcagccataggatattcctc 184
>gb|AY109394.1| Zea mays CL6440_1 mRNA sequence Length = 1225 Score = 355 bits (179), Expect = 1e-94 Identities = 284/319 (89%) Strand = Plus / Minus Query: 223 aagtatgatgggttattacatcaagagcagcatggggttgtcatgcaccactggcgtaca 282 |||||||||||||||||||||||||| || || | ||| ||||||||| || || |||| Sbjct: 650 aagtatgatgggttattacatcaagaacatcactgcgttctcatgcaccgctcgcataca 591 Query: 283 gacgggtccactccttcgctgtttcaacagcttctgcctcattggatttccagtgcttgg 342 | || ||||||||||| |||||||||||||||||| ||||||||| |||||||||||| | Sbjct: 590 ggcgagtccactccttagctgtttcaacagcttctacctcattggctttccagtgctttg 531 Query: 343 caatgttttcagagagagggtcatctggatttggtgcacttaagagtgcctggatactca 402 ||||||| || || |||||||| ||||||||||| ||||| | || ||||| ||||||| Sbjct: 530 caatgttatccgaaagagggtcgtctggatttggcgcactcagtagagcctgtatactca 471 Query: 403 aaagaactgttcgaatctgaagagccggactccatttatccttgagaatgtcaaggcata 462 |||||||||||||||||||||| || || |||||||| |||||||||||||| ||||||| Sbjct: 470 aaagaactgttcgaatctgaagtgctgggctccatttgtccttgagaatgtcgaggcata 411 Query: 463 tcctaccaagcttgtcaatgttgggatgatatattttggtcagaaacctaacctttgggg 522 |||||||||||||||| |||||||||||||| || || |||||||||||||||||||||| Sbjct: 410 tcctaccaagcttgtcgatgttgggatgatagatctttgtcagaaacctaacctttgggg 351 Query: 523 cagccatcggatattcctc 541 ||||||| ||||||||||| Sbjct: 350 cagccattggatattcctc 332 Score = 52.0 bits (26), Expect = 0.002 Identities = 43/48 (89%), Gaps = 3/48 (6%) Strand = Plus / Minus Query: 78 aaggtgccccagggtaaagggaaccaaccaacacaggtgtacaaccaa 125 ||||||||||| ||||||||||||| || ||||||||||||||||| Sbjct: 788 aaggtgccccaaggtaaagggaaccgac---cacaggtgtacaaccaa 744
>gb|BT016196.1| Zea mays clone Contig29 mRNA sequence Length = 537 Score = 276 bits (139), Expect = 7e-71 Identities = 238/271 (87%) Strand = Plus / Plus Query: 223 aagtatgatgggttattacatcaagagcagcatggggttgtcatgcaccactggcgtaca 282 |||||||||||||||||||||||||| || || | ||| ||||||||| || || |||| Sbjct: 254 aagtatgatgggttattacatcaagaacatcactgcgttctcatgcaccgctcgcataca 313 Query: 283 gacgggtccactccttcgctgtttcaacagcttctgcctcattggatttccagtgcttgg 342 | || ||||||||||| |||||||||||||||||| ||||||||| ||||||| |||| | Sbjct: 314 ggcgagtccactccttagctgtttcaacagcttctacctcattggctttccagggctttg 373 Query: 343 caatgttttcagagagagggtcatctggatttggtgcacttaagagtgcctggatactca 402 ||||||| || || ||||||| ||||||||||| ||||| | || ||||| ||||||| Sbjct: 374 caatgttatccgaaagagggtagtctggatttggcgcactcagtagagcctgtatactca 433 Query: 403 aaagaactgttcgaatctgaagagccggactccatttatccttgagaatgtcaaggcata 462 |||||||||||||||||||||| || || |||||||| |||||||||||||| ||||||| Sbjct: 434 aaagaactgttcgaatctgaagggctgggctccatttgtccttgagaatgtcgaggcata 493 Query: 463 tcctaccaagcttgtcaatgttgggatgata 493 |||||||||||||||| |||||||||||||| Sbjct: 494 tcctaccaagcttgtcgatgttgggatgata 524 Score = 52.0 bits (26), Expect = 0.002 Identities = 43/48 (89%), Gaps = 3/48 (6%) Strand = Plus / Plus Query: 78 aaggtgccccagggtaaagggaaccaaccaacacaggtgtacaaccaa 125 ||||||||||| ||||||||||||| || ||||||||||||||||| Sbjct: 116 aaggtgccccaaggtaaagggaaccgac---cacaggtgtacaaccaa 160
>gb|AY104524.1| Zea mays PCO106907 mRNA sequence Length = 780 Score = 248 bits (125), Expect = 2e-62 Identities = 242/281 (86%) Strand = Plus / Minus Query: 261 tgtcatgcaccactggcgtacagacgggtccactccttcgctgtttcaacagcttctgcc 320 |||||||| ||||| | |||||| || ||||||||||||||||| ||||||||||| || Sbjct: 561 tgtcatgccccacttgtgtacaggcgagtccactccttcgctgtctcaacagcttcagct 502 Query: 321 tcattggatttccagtgcttggcaatgttttcagagagagggtcatctggatttggtgca 380 || |||||||||||||| || |||||||| || |||||||| |||||||| ||||| || Sbjct: 501 tcgttggatttccagtgtttcgcaatgttgtctgagagaggatcatctgggtttggggcg 442 Query: 381 cttaagagtgcctggatactcaaaagaactgttcgaatctgaagagccggactccattta 440 || | |||||||| || |||| |||||||| || ||||||||||| ||||||||||| Sbjct: 441 ctcagaagtgcctgaatgctcagtagaactgtacgtatctgaagagctggactccatttg 382 Query: 441 tccttgagaatgtcaaggcatatcctaccaagcttgtcaatgttgggatgatatattttg 500 ||||| |||||||| |||||||||||||||||||||||||| || ||||| || ||||| Sbjct: 381 tccttaagaatgtcgaggcatatcctaccaagcttgtcaatattaggatggtaaattttt 322 Query: 501 gtcagaaacctaacctttggggcagccatcggatattcctc 541 || ||||| ||||| |||||||||||||| ||||||||||| Sbjct: 321 gtgagaaatctaacttttggggcagccattggatattcctc 281
>gb|DQ097726.1| Arachis hypogaea ubiquitin-conjugating enzyme 1 mRNA, complete cds Length = 700 Score = 188 bits (95), Expect = 1e-44 Identities = 212/251 (84%) Strand = Plus / Minus Query: 288 gtccactccttcgctgtttcaacagcttctgcctcattggatttccagtgcttggcaatg 347 ||||| |||||||| ||||||||||| || ||||| || |||||| |||||||||||| Sbjct: 558 gtccattccttcgcagtttcaacagcctcggcctcgttacttttccaatgcttggcaatg 499 Query: 348 ttttcagagagagggtcatctggatttggtgcacttaagagtgcctggatactcaaaaga 407 || ||||| || || |||||||| ||||||||||| || || |||||||||||||| || Sbjct: 498 ttctcagatagtggatcatctgggtttggtgcactcaacagagcctggatactcaagagt 439 Query: 408 actgttcgaatctgaagagccggactccatttatccttgagaatgtcaaggcatatccta 467 || || || |||||||| || || ||||| ||||| || ||||| ||||| |||||||| Sbjct: 438 acagtgcgtatctgaagggcagggctccacttatctttcagaatatcaagacatatcctg 379 Query: 468 ccaagcttgtcaatgttgggatgatatattttggtcagaaacctaacctttggggcagcc 527 |||||||| || ||||| |||||||||||||| || ||||||| ||||||||| |||||| Sbjct: 378 ccaagcttatcgatgtttggatgatatatttttgttagaaaccgaacctttggagcagcc 319 Query: 528 atcggatattc 538 || |||||||| Sbjct: 318 attggatattc 308
>ref|NM_179347.1| Arabidopsis thaliana ubiquitin conjugating enzyme/ ubiquitin-like activating enzyme AT1G16890 transcript variant AT1G16890.1 mRNA, complete cds Length = 804 Score = 182 bits (92), Expect = 8e-43 Identities = 227/272 (83%) Strand = Plus / Minus Query: 267 gcaccactggcgtacagacgggtccactccttcgctgtttcaacagcttctgcctcattg 326 |||||||| ||||| ||||| ||||| ||||| |||||||| |||||||||||||||||| Sbjct: 596 gcaccacttgcgtaaagacgagtccattccttagctgtttccacagcttctgcctcattg 537 Query: 327 gatttccagtgcttggcaatgttttcagagagagggtcatctggatttggtgcacttaag 386 ||||| ||||| || ||||| ||||| ||||| |||||||| |||||||||||||| Sbjct: 536 ctcttccaatgcttagctatgttctcagacagaggatcatctgggtttggtgcacttaaa 477 Query: 387 agtgcctggatactcaaaagaactgttcgaatctgaagagccggactccatttatccttg 446 || || ||||||||||| || || ||||| || || || || |||||||| || || || Sbjct: 476 agagcttggatactcaagagcacagttcgtatttgtagtgcaggactccacttgtctttc 417 Query: 447 agaatgtcaaggcatatcctaccaagcttgtcaatgttgggatgatatattttggtcaga 506 || ||||||||||| || || ||||||||||| ||||| ||||| || || ||||| ||| Sbjct: 416 agtatgtcaaggcagattcttccaagcttgtcgatgttaggatggtaaatcttggtgaga 357 Query: 507 aacctaacctttggggcagccatcggatattc 538 ||||||||||| || || ||||| |||||||| Sbjct: 356 aacctaaccttgggagctgccataggatattc 325
>ref|NM_101550.1| Arabidopsis thaliana ubiquitin conjugating enzyme/ ubiquitin-like activating enzyme AT1G16890 transcript variant AT1G16890.2 mRNA, complete cds Length = 794 Score = 182 bits (92), Expect = 8e-43 Identities = 227/272 (83%) Strand = Plus / Minus Query: 267 gcaccactggcgtacagacgggtccactccttcgctgtttcaacagcttctgcctcattg 326 |||||||| ||||| ||||| ||||| ||||| |||||||| |||||||||||||||||| Sbjct: 586 gcaccacttgcgtaaagacgagtccattccttagctgtttccacagcttctgcctcattg 527 Query: 327 gatttccagtgcttggcaatgttttcagagagagggtcatctggatttggtgcacttaag 386 ||||| ||||| || ||||| ||||| ||||| |||||||| |||||||||||||| Sbjct: 526 ctcttccaatgcttagctatgttctcagacagaggatcatctgggtttggtgcacttaaa 467 Query: 387 agtgcctggatactcaaaagaactgttcgaatctgaagagccggactccatttatccttg 446 || || ||||||||||| || || ||||| || || || || |||||||| || || || Sbjct: 466 agagcttggatactcaagagcacagttcgtatttgtagtgcaggactccacttgtctttc 407 Query: 447 agaatgtcaaggcatatcctaccaagcttgtcaatgttgggatgatatattttggtcaga 506 || ||||||||||| || || ||||||||||| ||||| ||||| || || ||||| ||| Sbjct: 406 agtatgtcaaggcagattcttccaagcttgtcgatgttaggatggtaaatcttggtgaga 347 Query: 507 aacctaacctttggggcagccatcggatattc 538 ||||||||||| || || ||||| |||||||| Sbjct: 346 aacctaaccttgggagctgccataggatattc 315
>gb|AY061926.1| Arabidopsis thaliana At1g16890/F17F16.16 mRNA, complete cds Length = 462 Score = 182 bits (92), Expect = 8e-43 Identities = 227/272 (83%) Strand = Plus / Minus Query: 267 gcaccactggcgtacagacgggtccactccttcgctgtttcaacagcttctgcctcattg 326 |||||||| ||||| ||||| ||||| ||||| |||||||| |||||||||||||||||| Sbjct: 458 gcaccacttgcgtaaagacgagtccattccttagctgtttccacagcttctgcctcattg 399 Query: 327 gatttccagtgcttggcaatgttttcagagagagggtcatctggatttggtgcacttaag 386 ||||| ||||| || ||||| ||||| ||||| |||||||| |||||||||||||| Sbjct: 398 ctcttccaatgcttagctatgttctcagacagaggatcatctgggtttggtgcacttaaa 339 Query: 387 agtgcctggatactcaaaagaactgttcgaatctgaagagccggactccatttatccttg 446 || || ||||||||||| || || ||||| || || || || |||||||| || || || Sbjct: 338 agagcttggatactcaagagcacagttcgtatttgtagtgcaggactccacttgtctttc 279 Query: 447 agaatgtcaaggcatatcctaccaagcttgtcaatgttgggatgatatattttggtcaga 506 || ||||||||||| || || ||||||||||| ||||| ||||| || || ||||| ||| Sbjct: 278 agtatgtcaaggcagattcttccaagcttgtcgatgttaggatggtaaatcttggtgaga 219 Query: 507 aacctaacctttggggcagccatcggatattc 538 ||||||||||| || || ||||| |||||||| Sbjct: 218 aacctaaccttgggagctgccataggatattc 187
>gb|AY052307.1| Arabidopsis thaliana At1g16890/F17F16.16 mRNA, complete cds Length = 751 Score = 182 bits (92), Expect = 8e-43 Identities = 227/272 (83%) Strand = Plus / Minus Query: 267 gcaccactggcgtacagacgggtccactccttcgctgtttcaacagcttctgcctcattg 326 |||||||| ||||| ||||| ||||| ||||| |||||||| |||||||||||||||||| Sbjct: 556 gcaccacttgcgtaaagacgagtccattccttagctgtttccacagcttctgcctcattg 497 Query: 327 gatttccagtgcttggcaatgttttcagagagagggtcatctggatttggtgcacttaag 386 ||||| ||||| || ||||| ||||| ||||| |||||||| |||||||||||||| Sbjct: 496 ctcttccaatgcttagctatgttctcagacagaggatcatctgggtttggtgcacttaaa 437 Query: 387 agtgcctggatactcaaaagaactgttcgaatctgaagagccggactccatttatccttg 446 || || ||||||||||| || || ||||| || || || || |||||||| || || || Sbjct: 436 agagcttggatactcaagagcacagttcgtatttgtagtgcaggactccacttgtctttc 377 Query: 447 agaatgtcaaggcatatcctaccaagcttgtcaatgttgggatgatatattttggtcaga 506 || ||||||||||| || || ||||||||||| ||||| ||||| || || ||||| ||| Sbjct: 376 agtatgtcaaggcagattcttccaagcttgtcgatgttaggatggtaaatcttggtgaga 317 Query: 507 aacctaacctttggggcagccatcggatattc 538 ||||||||||| || || ||||| |||||||| Sbjct: 316 aacctaaccttgggagctgccataggatattc 285
>gb|AY086780.1| Arabidopsis thaliana clone 2763 mRNA, complete sequence Length = 795 Score = 182 bits (92), Expect = 8e-43 Identities = 227/272 (83%) Strand = Plus / Minus Query: 267 gcaccactggcgtacagacgggtccactccttcgctgtttcaacagcttctgcctcattg 326 |||||||| ||||| ||||| ||||| ||||| |||||||| |||||||||||||||||| Sbjct: 587 gcaccacttgcgtaaagacgagtccattccttagctgtttccacagcttctgcctcattg 528 Query: 327 gatttccagtgcttggcaatgttttcagagagagggtcatctggatttggtgcacttaag 386 ||||| ||||| || ||||| ||||| ||||| |||||||| |||||||||||||| Sbjct: 527 ctcttccaatgcttagctatgttctcagacagaggatcatctgggtttggtgcacttaaa 468 Query: 387 agtgcctggatactcaaaagaactgttcgaatctgaagagccggactccatttatccttg 446 || || ||||||||||| || || ||||| || || || || |||||||| || || || Sbjct: 467 agagcttggatactcaagagcacagttcgtatttgtagtgcaggactccacttgtctttc 408 Query: 447 agaatgtcaaggcatatcctaccaagcttgtcaatgttgggatgatatattttggtcaga 506 || ||||||||||| || || ||||||||||| ||||| ||||| || || ||||| ||| Sbjct: 407 agtatgtcaaggcagattcttccaagcttgtcgatgttaggatggtaaatcttggtgaga 348 Query: 507 aacctaacctttggggcagccatcggatattc 538 ||||||||||| || || ||||| |||||||| Sbjct: 347 aacctaaccttgggagctgccataggatattc 316
>gb|DQ027049.1| Arabidopsis thaliana ubiquitinating enzyme (At1g16890) mRNA, complete cds Length = 462 Score = 182 bits (92), Expect = 8e-43 Identities = 227/272 (83%) Strand = Plus / Minus Query: 267 gcaccactggcgtacagacgggtccactccttcgctgtttcaacagcttctgcctcattg 326 |||||||| ||||| ||||| ||||| ||||| |||||||| |||||||||||||||||| Sbjct: 458 gcaccacttgcgtaaagacgagtccattccttagctgtttccacagcttctgcctcattg 399 Query: 327 gatttccagtgcttggcaatgttttcagagagagggtcatctggatttggtgcacttaag 386 ||||| ||||| || ||||| ||||| ||||| |||||||| |||||||||||||| Sbjct: 398 ctcttccaatgcttagctatgttctcagacagaggatcatctgggtttggtgcacttaaa 339 Query: 387 agtgcctggatactcaaaagaactgttcgaatctgaagagccggactccatttatccttg 446 || || ||||||||||| || || ||||| || || || || |||||||| || || || Sbjct: 338 agagcttggatactcaagagcacagttcgtatttgtagtgcaggactccacttgtctttc 279 Query: 447 agaatgtcaaggcatatcctaccaagcttgtcaatgttgggatgatatattttggtcaga 506 || ||||||||||| || || ||||||||||| ||||| ||||| || || ||||| ||| Sbjct: 278 agtatgtcaaggcagattcttccaagcttgtcgatgttaggatggtaaatcttggtgaga 219 Query: 507 aacctaacctttggggcagccatcggatattc 538 ||||||||||| || || ||||| |||||||| Sbjct: 218 aacctaaccttgggagctgccataggatattc 187
>emb|BX813701.1|CNS0AEIF Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB34ZF06 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 745 Score = 167 bits (84), Expect = 5e-38 Identities = 225/272 (82%) Strand = Plus / Minus Query: 267 gcaccactggcgtacagacgggtccactccttcgctgtttcaacagcttctgcctcattg 326 |||| ||| ||||| ||||| ||||| |||||||||||||| |||||||||||||||||| Sbjct: 555 gcacaacttgcgtaaagacgagtccattccttcgctgtttccacagcttctgcctcattg 496 Query: 327 gatttccagtgcttggcaatgttttcagagagagggtcatctggatttggtgcacttaag 386 ||||| ||||| || |||| | ||||||||| |||||||| |||||||||||||| Sbjct: 495 ctcttccaatgcttagctatgtgctgagagagaggatcatctgggtttggtgcacttaaa 436 Query: 387 agtgcctggatactcaaaagaactgttcgaatctgaagagccggactccatttatccttg 446 || || ||||||||||| | || ||||| || || || || |||||||| || || || Sbjct: 435 agagcttggatactcaagaacacagttcgtatttgtagtgcaggactccacttgtctttc 376 Query: 447 agaatgtcaaggcatatcctaccaagcttgtcaatgttgggatgatatattttggtcaga 506 || ||||||||||| || || ||||||||||| ||||| ||||| || || ||||| ||| Sbjct: 375 agtatgtcaaggcagattcttccaagcttgtcgatgttaggatggtaaatcttggtgaga 316 Query: 507 aacctaacctttggggcagccatcggatattc 538 ||||||||||| || || ||||| |||||||| Sbjct: 315 aacctaaccttgggagctgccataggatattc 284
>ref|NM_179571.2| Arabidopsis thaliana ubiquitin conjugating enzyme/ ubiquitin-like activating enzyme AT1G78870 transcript variant AT1G78870.1 mRNA, complete cds Length = 905 Score = 153 bits (77), Expect = 7e-34 Identities = 212/257 (82%) Strand = Plus / Minus Query: 282 agacgggtccactccttcgctgtttcaacagcttctgcctcattggatttccagtgcttg 341 ||||||||||| ||||| ||||| || ||||||||||||||||| ||||||||||| Sbjct: 572 agacgggtccattccttagctgtatccacagcttctgcctcattactcttccagtgctta 513 Query: 342 gcaatgttttcagagagagggtcatctggatttggtgcacttaagagtgcctggatactc 401 |||||||| ||||| || || |||||||| ||||||||||| | || || || ||||| Sbjct: 512 gcaatgttctcagaaagcggatcatctgggtttggtgcactcagaagagcttgaatactt 453 Query: 402 aaaagaactgttcgaatctgaagagccggactccatttatccttgagaatgtcaaggcat 461 || || |||||||| || || || || || |||||||| ||||||||||| ||||| || Sbjct: 452 aagagcactgttcgtatttgtagtgcagggctccatttgtccttgagaatatcaagacag 393 Query: 462 atcctaccaagcttgtcaatgttgggatgatatattttggtcagaaacctaacctttggg 521 || || ||||||||||||||||| ||||| ||||| || || |||||||||||||| || Sbjct: 392 attcttccaagcttgtcaatgttaggatggtatatctttgtgagaaacctaaccttggga 333 Query: 522 gcagccatcggatattc 538 || ||||| || ||||| Sbjct: 332 gctgccatagggtattc 316
>ref|NM_106535.2| Arabidopsis thaliana ubiquitin conjugating enzyme/ ubiquitin-like activating enzyme AT1G78870 transcript variant AT1G78870.2 mRNA, complete cds Length = 909 Score = 153 bits (77), Expect = 7e-34 Identities = 212/257 (82%) Strand = Plus / Minus Query: 282 agacgggtccactccttcgctgtttcaacagcttctgcctcattggatttccagtgcttg 341 ||||||||||| ||||| ||||| || ||||||||||||||||| ||||||||||| Sbjct: 576 agacgggtccattccttagctgtatccacagcttctgcctcattactcttccagtgctta 517 Query: 342 gcaatgttttcagagagagggtcatctggatttggtgcacttaagagtgcctggatactc 401 |||||||| ||||| || || |||||||| ||||||||||| | || || || ||||| Sbjct: 516 gcaatgttctcagaaagcggatcatctgggtttggtgcactcagaagagcttgaatactt 457 Query: 402 aaaagaactgttcgaatctgaagagccggactccatttatccttgagaatgtcaaggcat 461 || || |||||||| || || || || || |||||||| ||||||||||| ||||| || Sbjct: 456 aagagcactgttcgtatttgtagtgcagggctccatttgtccttgagaatatcaagacag 397 Query: 462 atcctaccaagcttgtcaatgttgggatgatatattttggtcagaaacctaacctttggg 521 || || ||||||||||||||||| ||||| ||||| || || |||||||||||||| || Sbjct: 396 attcttccaagcttgtcaatgttaggatggtatatctttgtgagaaacctaaccttggga 337 Query: 522 gcagccatcggatattc 538 || ||||| || ||||| Sbjct: 336 gctgccatagggtattc 320
>gb|BT000544.1| Arabidopsis thaliana putative ubiquitin-conjugating enzyme E2 (At1g78870/F9K20_8) mRNA, complete cds Length = 462 Score = 153 bits (77), Expect = 7e-34 Identities = 212/257 (82%) Strand = Plus / Minus Query: 282 agacgggtccactccttcgctgtttcaacagcttctgcctcattggatttccagtgcttg 341 ||||||||||| ||||| ||||| || ||||||||||||||||| ||||||||||| Sbjct: 443 agacgggtccattccttagctgtatccacagcttctgcctcattactcttccagtgctta 384 Query: 342 gcaatgttttcagagagagggtcatctggatttggtgcacttaagagtgcctggatactc 401 |||||||| ||||| || || |||||||| ||||||||||| | || || || ||||| Sbjct: 383 gcaatgttctcagaaagcggatcatctgggtttggtgcactcagaagagcttgaatactt 324 Query: 402 aaaagaactgttcgaatctgaagagccggactccatttatccttgagaatgtcaaggcat 461 || || |||||||| || || || || || |||||||| ||||||||||| ||||| || Sbjct: 323 aagagcactgttcgtatttgtagtgcagggctccatttgtccttgagaatatcaagacag 264 Query: 462 atcctaccaagcttgtcaatgttgggatgatatattttggtcagaaacctaacctttggg 521 || || ||||||||||||||||| ||||| ||||| || || |||||||||||||| || Sbjct: 263 attcttccaagcttgtcaatgttaggatggtatatctttgtgagaaacctaaccttggga 204 Query: 522 gcagccatcggatattc 538 || ||||| || ||||| Sbjct: 203 gctgccatagggtattc 187
>gb|AY049261.1| Arabidopsis thaliana At1g78870/F9K20_8 mRNA, complete cds Length = 757 Score = 153 bits (77), Expect = 7e-34 Identities = 212/257 (82%) Strand = Plus / Minus Query: 282 agacgggtccactccttcgctgtttcaacagcttctgcctcattggatttccagtgcttg 341 ||||||||||| ||||| ||||| || ||||||||||||||||| ||||||||||| Sbjct: 553 agacgggtccattccttagctgtatccacagcttctgcctcattactcttccagtgctta 494 Query: 342 gcaatgttttcagagagagggtcatctggatttggtgcacttaagagtgcctggatactc 401 |||||||| ||||| || || |||||||| ||||||||||| | || || || ||||| Sbjct: 493 gcaatgttctcagaaagcggatcatctgggtttggtgcactcagaagagcttgaatactt 434 Query: 402 aaaagaactgttcgaatctgaagagccggactccatttatccttgagaatgtcaaggcat 461 || || |||||||| || || || || || |||||||| ||||||||||| ||||| || Sbjct: 433 aagagcactgttcgtatttgtagtgcagggctccatttgtccttgagaatatcaagacag 374 Query: 462 atcctaccaagcttgtcaatgttgggatgatatattttggtcagaaacctaacctttggg 521 || || ||||||||||||||||| ||||| ||||| || || |||||||||||||| || Sbjct: 373 attcttccaagcttgtcaatgttaggatggtatatctttgtgagaaacctaaccttggga 314 Query: 522 gcagccatcggatattc 538 || ||||| || ||||| Sbjct: 313 gctgccatagggtattc 297
>emb|BX814646.1|CNS0AC4W Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB86ZH05 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 515 Score = 153 bits (77), Expect = 7e-34 Identities = 212/257 (82%) Strand = Plus / Minus Query: 282 agacgggtccactccttcgctgtttcaacagcttctgcctcattggatttccagtgcttg 341 ||||||||||| ||||| ||||| || ||||||||||||||||| ||||||||||| Sbjct: 294 agacgggtccattccttagctgtatccacagcttctgcctcattactcttccagtgctta 235 Query: 342 gcaatgttttcagagagagggtcatctggatttggtgcacttaagagtgcctggatactc 401 |||||||| ||||| || || |||||||| ||||||||||| | || || || ||||| Sbjct: 234 gcaatgttctcagaaagcggatcatctgggtttggtgcactcagaagagcttgaatactt 175 Query: 402 aaaagaactgttcgaatctgaagagccggactccatttatccttgagaatgtcaaggcat 461 || || |||||||| || || || || || |||||||| ||||||||||| ||||| || Sbjct: 174 aagagcactgttcgtatttgtagtgcagggctccatttgtccttgagaatatcaagacag 115 Query: 462 atcctaccaagcttgtcaatgttgggatgatatattttggtcagaaacctaacctttggg 521 || || ||||||||||||||||| ||||| ||||| || || |||||||||||||| || Sbjct: 114 attcttccaagcttgtcaatgttaggatggtatatctttgtgagaaacctaaccttggga 55 Query: 522 gcagccatcggatattc 538 || ||||| || ||||| Sbjct: 54 gctgccatagggtattc 38
>gb|AY085854.1| Arabidopsis thaliana clone 19071 mRNA, complete sequence Length = 778 Score = 153 bits (77), Expect = 7e-34 Identities = 212/257 (82%) Strand = Plus / Minus Query: 282 agacgggtccactccttcgctgtttcaacagcttctgcctcattggatttccagtgcttg 341 ||||||||||| ||||| ||||| || ||||||||||||||||| ||||||||||| Sbjct: 576 agacgggtccattccttagctgtatccacagcttctgcctcattactcttccagtgctta 517 Query: 342 gcaatgttttcagagagagggtcatctggatttggtgcacttaagagtgcctggatactc 401 |||||||| ||||| || || |||||||| ||||||||||| | || || || ||||| Sbjct: 516 gcaatgttctcagaaagcggatcatctgggtttggtgcactcagaagagcttgaatactt 457 Query: 402 aaaagaactgttcgaatctgaagagccggactccatttatccttgagaatgtcaaggcat 461 || || |||||||| || || || || || |||||||| ||||||||||| ||||| || Sbjct: 456 aagagcactgttcgtatttgtagtgcagggctccatttgtccttgagaatatcaagacag 397 Query: 462 atcctaccaagcttgtcaatgttgggatgatatattttggtcagaaacctaacctttggg 521 || || ||||||||||||||||| ||||| ||||| || || |||||||||||||| || Sbjct: 396 attcttccaagcttgtcaatgttaggatggtatatctttgtgagaaacctaaccttggga 337 Query: 522 gcagccatcggatattc 538 || ||||| || ||||| Sbjct: 336 gctgccatagggtattc 320
>gb|DQ027048.1| Arabidopsis thaliana ubiquitinating enzyme (At1g78870) mRNA, complete cds Length = 462 Score = 153 bits (77), Expect = 7e-34 Identities = 212/257 (82%) Strand = Plus / Minus Query: 282 agacgggtccactccttcgctgtttcaacagcttctgcctcattggatttccagtgcttg 341 ||||||||||| ||||| ||||| || ||||||||||||||||| ||||||||||| Sbjct: 443 agacgggtccattccttagctgtatccacagcttctgcctcattactcttccagtgctta 384 Query: 342 gcaatgttttcagagagagggtcatctggatttggtgcacttaagagtgcctggatactc 401 |||||||| ||||| || || |||||||| ||||||||||| | || || || ||||| Sbjct: 383 gcaatgttctcagaaagcggatcatctgggtttggtgcactcagaagagcttgaatactt 324 Query: 402 aaaagaactgttcgaatctgaagagccggactccatttatccttgagaatgtcaaggcat 461 || || |||||||| || || || || || |||||||| ||||||||||| ||||| || Sbjct: 323 aagagcactgttcgtatttgtagtgcagggctccatttgtccttgagaatatcaagacag 264 Query: 462 atcctaccaagcttgtcaatgttgggatgatatattttggtcagaaacctaacctttggg 521 || || ||||||||||||||||| ||||| ||||| || || |||||||||||||| || Sbjct: 263 attcttccaagcttgtcaatgttaggatggtatatctttgtgagaaacctaaccttggga 204 Query: 522 gcagccatcggatattc 538 || ||||| || ||||| Sbjct: 203 gctgccatagggtattc 187
>gb|AF091621.1| Catharanthus roseus ubiquitin-conjugating enzyme E2 (UBIE2) mRNA, complete cds Length = 794 Score = 149 bits (75), Expect = 1e-32 Identities = 207/251 (82%) Strand = Plus / Minus Query: 288 gtccactccttcgctgtttcaacagcttctgcctcattggatttccagtgcttggcaatg 347 ||||| ||||| |||||||||||||| || |||||||| || ||||| || || |||||| Sbjct: 524 gtccattcctttgctgtttcaacagcctcagcctcatttgacttccaatgtttagcaatg 465 Query: 348 ttttcagagagagggtcatctggatttggtgcacttaagagtgcctggatactcaaaaga 407 || ||||| || ||||||||||||||||| ||||| | || || ||||| || | | Sbjct: 464 ttctcagaaagtgggtcatctggatttggagcactaagaagagcttggatgcttagcaat 405 Query: 408 actgttcgaatctgaagagccggactccatttatccttgagaatgtcaaggcatatccta 467 || ||||| ||||| || || ||||||||||| || ||||||||||||||||||||||| Sbjct: 404 acggttcgtatctggagtgctggactccatttgtctttgagaatgtcaaggcatatcctt 345 Query: 468 ccaagcttgtcaatgttgggatgatatattttggtcagaaacctaacctttggggcagcc 527 || || ||||||||||| ||||| ||||||||||||| ||| | |||||| || | ||| Sbjct: 344 cccagtttgtcaatgttaggatggtatattttggtcaaaaatcgaaccttgggtggtgcc 285 Query: 528 atcggatattc 538 || |||||||| Sbjct: 284 attggatattc 274
>emb|BX814028.1|CNS0AE9U Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB52ZH04 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 803 Score = 149 bits (75), Expect = 1e-32 Identities = 210/255 (82%) Strand = Plus / Minus Query: 284 acgggtccactccttcgctgtttcaacagcttctgcctcattggatttccagtgcttggc 343 ||||||||| ||||| ||||| || || |||||||||||||| ||||||||||| || Sbjct: 559 acgggtccattccttagctgtatccaccgcttctgcctcattactcttccagtgcttagc 500 Query: 344 aatgttttcagagagagggtcatctggatttggtgcacttaagagtgcctggatactcaa 403 |||||| ||||| || || |||||||| ||||||||||| | || || || ||||| || Sbjct: 499 aatgttctcagaaagcggatcatctgggtttggtgcactcagaagagcttgaatacttaa 440 Query: 404 aagaactgttcgaatctgaagagccggactccatttatccttgagaatgtcaaggcatat 463 ||||||||||| || || || || || |||||||| ||||||||||| ||||| || || Sbjct: 439 gagaactgttcgtatttgtagtgcagggctccatttgtccttgagaatatcaagacagat 380 Query: 464 cctaccaagcttgtcaatgttgggatgatatattttggtcagaaacctaacctttggggc 523 || ||||||||||||||||| ||||| ||||| || || |||||||||||||| || || Sbjct: 379 tcttccaagcttgtcaatgttaggatggtatatctttgtgagaaacctaaccttgggcgc 320 Query: 524 agccatcggatattc 538 ||||| || ||||| Sbjct: 319 tgccatagggtattc 305
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 137 bits (69), Expect = 4e-29 Identities = 96/105 (91%) Strand = Plus / Plus Query: 301 ctgtttcaacagcttctgcctcattggatttccagtgcttggcaatgttttcagagagag 360 ||||||||||||||||||| ||||||| |||||||||||| |||||||| |||||||||| Sbjct: 27662251 ctgtttcaacagcttctgcttcattggctttccagtgctttgcaatgttatcagagagag 27662310 Query: 361 ggtcatctggatttggtgcacttaagagtgcctggatactcaaaa 405 | ||||| || ||||||||||||| ||||||||||||||| |||| Sbjct: 27662311 gatcatcagggtttggtgcacttaggagtgcctggatactgaaaa 27662355 Score = 111 bits (56), Expect = 2e-21 Identities = 71/76 (93%) Strand = Plus / Plus Query: 399 ctcaaaagaactgttcgaatctgaagagccggactccatttatccttgagaatgtcaagg 458 |||||||||||||| ||||||||||| || || |||||||| |||||||||||||||||| Sbjct: 27662607 ctcaaaagaactgtccgaatctgaagggctgggctccatttgtccttgagaatgtcaagg 27662666 Query: 459 catatcctaccaagct 474 |||||||||||||||| Sbjct: 27662667 catatcctaccaagct 27662682 Score = 65.9 bits (33), Expect = 1e-07 Identities = 108/129 (83%), Gaps = 3/129 (2%) Strand = Plus / Plus Query: 175 atctccagtttgttctttaccaaccaaatggcactagattgctggctaaagtatgatggg 234 ||||||||||||||||| | ||| ||||||||| | |||| |||||||| |||| ||| Sbjct: 27662037 atctccagtttgttctt-atcaagcaaatggcatttgattaa-ggctaaagcatgacggg 27662094 Query: 235 ttattacatcaagagcagcatggggttgtcatgcaccactggcgtacagacgggtccact 294 ||||||||||| ||| |||| ||||| | ||||||| ||||| ||||| || ||||||| Sbjct: 27662095 ttattacatcacgagaggcattgggtt-ttatgcaccgctggcatacaggcgagtccact 27662153 Query: 295 ccttcgctg 303 |||| |||| Sbjct: 27662154 cctttgctg 27662162 Score = 63.9 bits (32), Expect = 5e-07 Identities = 41/44 (93%) Strand = Plus / Plus Query: 473 cttgtcaatgttgggatgatatattttggtcagaaacctaacct 516 ||||||||||||||| || |||||||||||||| |||||||||| Sbjct: 27662760 cttgtcaatgttggggtggtatattttggtcaggaacctaacct 27662803 Score = 48.1 bits (24), Expect = 0.030 Identities = 27/28 (96%) Strand = Plus / Plus Query: 80 ggtgccccagggtaaagggaaccaacca 107 ||||||| |||||||||||||||||||| Sbjct: 27661951 ggtgccctagggtaaagggaaccaacca 27661978 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 513 acctttggggcagccatcggatattcctc 541 |||||||| |||||||| ||||||||||| Sbjct: 27663589 acctttggagcagccataggatattcctc 27663617 Score = 40.1 bits (20), Expect = 7.4 Identities = 29/32 (90%) Strand = Plus / Minus Query: 432 ctccatttatccttgagaatgtcaaggcatat 463 ||||||| ||||| ||||||||||||||||| Sbjct: 34933599 ctccattgctccttaagaatgtcaaggcatat 34933568
>dbj|AP003264.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0485G01 Length = 167203 Score = 137 bits (69), Expect = 4e-29 Identities = 96/105 (91%) Strand = Plus / Plus Query: 301 ctgtttcaacagcttctgcctcattggatttccagtgcttggcaatgttttcagagagag 360 ||||||||||||||||||| ||||||| |||||||||||| |||||||| |||||||||| Sbjct: 70817 ctgtttcaacagcttctgcttcattggctttccagtgctttgcaatgttatcagagagag 70876 Query: 361 ggtcatctggatttggtgcacttaagagtgcctggatactcaaaa 405 | ||||| || ||||||||||||| ||||||||||||||| |||| Sbjct: 70877 gatcatcagggtttggtgcacttaggagtgcctggatactgaaaa 70921 Score = 111 bits (56), Expect = 2e-21 Identities = 71/76 (93%) Strand = Plus / Plus Query: 399 ctcaaaagaactgttcgaatctgaagagccggactccatttatccttgagaatgtcaagg 458 |||||||||||||| ||||||||||| || || |||||||| |||||||||||||||||| Sbjct: 71173 ctcaaaagaactgtccgaatctgaagggctgggctccatttgtccttgagaatgtcaagg 71232 Query: 459 catatcctaccaagct 474 |||||||||||||||| Sbjct: 71233 catatcctaccaagct 71248 Score = 65.9 bits (33), Expect = 1e-07 Identities = 108/129 (83%), Gaps = 3/129 (2%) Strand = Plus / Plus Query: 175 atctccagtttgttctttaccaaccaaatggcactagattgctggctaaagtatgatggg 234 ||||||||||||||||| | ||| ||||||||| | |||| |||||||| |||| ||| Sbjct: 70603 atctccagtttgttctt-atcaagcaaatggcatttgattaa-ggctaaagcatgacggg 70660 Query: 235 ttattacatcaagagcagcatggggttgtcatgcaccactggcgtacagacgggtccact 294 ||||||||||| ||| |||| ||||| | ||||||| ||||| ||||| || ||||||| Sbjct: 70661 ttattacatcacgagaggcattgggtt-ttatgcaccgctggcatacaggcgagtccact 70719 Query: 295 ccttcgctg 303 |||| |||| Sbjct: 70720 cctttgctg 70728 Score = 63.9 bits (32), Expect = 5e-07 Identities = 41/44 (93%) Strand = Plus / Plus Query: 473 cttgtcaatgttgggatgatatattttggtcagaaacctaacct 516 ||||||||||||||| || |||||||||||||| |||||||||| Sbjct: 71326 cttgtcaatgttggggtggtatattttggtcaggaacctaacct 71369 Score = 48.1 bits (24), Expect = 0.030 Identities = 27/28 (96%) Strand = Plus / Plus Query: 80 ggtgccccagggtaaagggaaccaacca 107 ||||||| |||||||||||||||||||| Sbjct: 70517 ggtgccctagggtaaagggaaccaacca 70544 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 513 acctttggggcagccatcggatattcctc 541 |||||||| |||||||| ||||||||||| Sbjct: 72155 acctttggagcagccataggatattcctc 72183
>dbj|AP003223.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0007F06 Length = 150817 Score = 137 bits (69), Expect = 4e-29 Identities = 96/105 (91%) Strand = Plus / Plus Query: 301 ctgtttcaacagcttctgcctcattggatttccagtgcttggcaatgttttcagagagag 360 ||||||||||||||||||| ||||||| |||||||||||| |||||||| |||||||||| Sbjct: 129545 ctgtttcaacagcttctgcttcattggctttccagtgctttgcaatgttatcagagagag 129604 Query: 361 ggtcatctggatttggtgcacttaagagtgcctggatactcaaaa 405 | ||||| || ||||||||||||| ||||||||||||||| |||| Sbjct: 129605 gatcatcagggtttggtgcacttaggagtgcctggatactgaaaa 129649 Score = 111 bits (56), Expect = 2e-21 Identities = 71/76 (93%) Strand = Plus / Plus Query: 399 ctcaaaagaactgttcgaatctgaagagccggactccatttatccttgagaatgtcaagg 458 |||||||||||||| ||||||||||| || || |||||||| |||||||||||||||||| Sbjct: 129901 ctcaaaagaactgtccgaatctgaagggctgggctccatttgtccttgagaatgtcaagg 129960 Query: 459 catatcctaccaagct 474 |||||||||||||||| Sbjct: 129961 catatcctaccaagct 129976 Score = 65.9 bits (33), Expect = 1e-07 Identities = 108/129 (83%), Gaps = 3/129 (2%) Strand = Plus / Plus Query: 175 atctccagtttgttctttaccaaccaaatggcactagattgctggctaaagtatgatggg 234 ||||||||||||||||| | ||| ||||||||| | |||| |||||||| |||| ||| Sbjct: 129331 atctccagtttgttctt-atcaagcaaatggcatttgattaa-ggctaaagcatgacggg 129388 Query: 235 ttattacatcaagagcagcatggggttgtcatgcaccactggcgtacagacgggtccact 294 ||||||||||| ||| |||| ||||| | ||||||| ||||| ||||| || ||||||| Sbjct: 129389 ttattacatcacgagaggcattgggtt-ttatgcaccgctggcatacaggcgagtccact 129447 Query: 295 ccttcgctg 303 |||| |||| Sbjct: 129448 cctttgctg 129456 Score = 63.9 bits (32), Expect = 5e-07 Identities = 41/44 (93%) Strand = Plus / Plus Query: 473 cttgtcaatgttgggatgatatattttggtcagaaacctaacct 516 ||||||||||||||| || |||||||||||||| |||||||||| Sbjct: 130054 cttgtcaatgttggggtggtatattttggtcaggaacctaacct 130097 Score = 48.1 bits (24), Expect = 0.030 Identities = 27/28 (96%) Strand = Plus / Plus Query: 80 ggtgccccagggtaaagggaaccaacca 107 ||||||| |||||||||||||||||||| Sbjct: 129245 ggtgccctagggtaaagggaaccaacca 129272 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 513 acctttggggcagccatcggatattcctc 541 |||||||| |||||||| ||||||||||| Sbjct: 130883 acctttggagcagccataggatattcctc 130911
>gb|AF165420.1| Mesembryanthemum crystallinum ubiquitin-conjugating enzyme (Ubc1) mRNA, partial cds Length = 556 Score = 121 bits (61), Expect = 3e-24 Identities = 190/233 (81%) Strand = Plus / Minus Query: 288 gtccactccttcgctgtttcaacagcttctgcctcattggatttccagtgcttggcaatg 347 ||||| ||||| |||||||| |||||||| | ||||| | ||||| ||||| |||||| Sbjct: 247 gtccattcctttgctgtttccacagcttcgacttcattagtcttccaatgctttgcaatg 188 Query: 348 ttttcagagagagggtcatctggatttggtgcacttaagagtgcctggatactcaaaaga 407 ||||| || || || ||||||||||| || ||||| || || || || || ||||| || Sbjct: 187 ttttctgaaaggggatcatctggattgggggcactcaaaagagcttgaatgctcaatagt 128 Query: 408 actgttcgaatctgaagagccggactccatttatccttgagaatgtcaaggcatatccta 467 || ||||| ||||| ||||| || ||||||||||| || |||||||| |||||||| || Sbjct: 127 acggttcggatctgcagagctgggctccatttatctttaagaatgtctaggcatattctt 68 Query: 468 ccaagcttgtcaatgttgggatgatatattttggtcagaaacctaacctttgg 520 |||||||| |||||||| || || || || ||||||| |||||||||||||| Sbjct: 67 ccaagcttatcaatgttagggtggtaaatcttggtcaagaacctaacctttgg 15
>ref|NM_001036221.1| Arabidopsis thaliana ubiquitin conjugating enzyme/ ubiquitin-like activating enzyme AT1G78870 transcript variant AT1G78870.3 mRNA, complete cds Length = 1013 Score = 89.7 bits (45), Expect = 9e-15 Identities = 87/101 (86%) Strand = Plus / Minus Query: 282 agacgggtccactccttcgctgtttcaacagcttctgcctcattggatttccagtgcttg 341 ||||||||||| ||||| ||||| || ||||||||||||||||| ||||||||||| Sbjct: 680 agacgggtccattccttagctgtatccacagcttctgcctcattactcttccagtgctta 621 Query: 342 gcaatgttttcagagagagggtcatctggatttggtgcact 382 |||||||| ||||| || || |||||||| ||||||||||| Sbjct: 620 gcaatgttctcagaaagcggatcatctgggtttggtgcact 580 Score = 85.7 bits (43), Expect = 1e-13 Identities = 91/107 (85%) Strand = Plus / Minus Query: 432 ctccatttatccttgagaatgtcaaggcatatcctaccaagcttgtcaatgttgggatga 491 |||||||| ||||||||||| ||||| || || || ||||||||||||||||| ||||| Sbjct: 427 ctccatttgtccttgagaatatcaagacagattcttccaagcttgtcaatgttaggatgg 368 Query: 492 tatattttggtcagaaacctaacctttggggcagccatcggatattc 538 ||||| || || |||||||||||||| || || ||||| || ||||| Sbjct: 367 tatatctttgtgagaaacctaaccttgggagctgccatagggtattc 321
>emb|BX813418.1|CNS0ACA7 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB16ZE06 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1385 Score = 89.7 bits (45), Expect = 9e-15 Identities = 87/101 (86%) Strand = Plus / Minus Query: 282 agacgggtccactccttcgctgtttcaacagcttctgcctcattggatttccagtgcttg 341 ||||||||||| ||||| ||||| || ||||||||||||||||| ||||||||||| Sbjct: 1212 agacgggtccattccttagctgtatccacagcttctgcctcattactcttccagtgctta 1153 Query: 342 gcaatgttttcagagagagggtcatctggatttggtgcact 382 |||||||| ||||| || || |||||||| ||||||||||| Sbjct: 1152 gcaatgttctcagaaagcggatcatctgggtttggtgcact 1112 Score = 81.8 bits (41), Expect = 2e-12 Identities = 74/85 (87%) Strand = Plus / Minus Query: 432 ctccatttatccttgagaatgtcaaggcatatcctaccaagcttgtcaatgttgggatga 491 |||||||| ||||||||||| ||||| || || || ||||||||||||||||| ||||| Sbjct: 959 ctccatttgtccttgagaatatcaagacagattcttccaagcttgtcaatgttaggatgg 900 Query: 492 tatattttggtcagaaacctaacct 516 ||||| || || ||||||||||||| Sbjct: 899 tatatctttgtgagaaacctaacct 875
>gb|AC026237.4|AC026237 Arabidopsis thaliana chromosome I BAC F17F16 genomic sequence, complete sequence Length = 90498 Score = 87.7 bits (44), Expect = 4e-14 Identities = 86/100 (86%) Strand = Plus / Minus Query: 301 ctgtttcaacagcttctgcctcattggatttccagtgcttggcaatgttttcagagagag 360 ||||||| |||||||||||||||||| ||||| ||||| || ||||| ||||| |||| Sbjct: 24249 ctgtttccacagcttctgcctcattgctcttccaatgcttagctatgttctcagacagag 24190 Query: 361 ggtcatctggatttggtgcacttaagagtgcctggatact 400 | |||||||| |||||||||||||| || || |||||||| Sbjct: 24189 gatcatctgggtttggtgcacttaaaagagcttggatact 24150 Score = 40.1 bits (20), Expect = 7.4 Identities = 38/44 (86%) Strand = Plus / Minus Query: 473 cttgtcaatgttgggatgatatattttggtcagaaacctaacct 516 |||||| ||||| ||||| || || ||||| ||||||||||||| Sbjct: 23857 cttgtcgatgttaggatggtaaatcttggtgagaaacctaacct 23814
>gb|AC051629.3|AC051629 Arabidopsis thaliana chromosome I BAC F6I1 genomic sequence, complete sequence Length = 93677 Score = 87.7 bits (44), Expect = 4e-14 Identities = 86/100 (86%) Strand = Plus / Minus Query: 301 ctgtttcaacagcttctgcctcattggatttccagtgcttggcaatgttttcagagagag 360 ||||||| |||||||||||||||||| ||||| ||||| || ||||| ||||| |||| Sbjct: 70946 ctgtttccacagcttctgcctcattgctcttccaatgcttagctatgttctcagacagag 70887 Query: 361 ggtcatctggatttggtgcacttaagagtgcctggatact 400 | |||||||| |||||||||||||| || || |||||||| Sbjct: 70886 gatcatctgggtttggtgcacttaaaagagcttggatact 70847 Score = 40.1 bits (20), Expect = 7.4 Identities = 38/44 (86%) Strand = Plus / Minus Query: 473 cttgtcaatgttgggatgatatattttggtcagaaacctaacct 516 |||||| ||||| ||||| || || ||||| ||||||||||||| Sbjct: 70554 cttgtcgatgttaggatggtaaatcttggtgagaaacctaacct 70511
>gb|DQ306757.1| Hevea brasiliensis isolate SSH28 mRNA sequence Length = 413 Score = 87.7 bits (44), Expect = 4e-14 Identities = 101/120 (84%) Strand = Plus / Plus Query: 287 ggtccactccttcgctgtttcaacagcttctgcctcattggatttccagtgcttggcaat 346 |||||| ||||| ||||| ||||||||||| |||||||| | |||||| ||||| ||||| Sbjct: 293 ggtccattcctttgctgtctcaacagcttcagcctcattcgttttccaatgctttgcaat 352 Query: 347 gttttcagagagagggtcatctggatttggtgcacttaagagtgcctggatactcaaaag 406 ||| ||||| || || ||||| || ||||| ||||| | ||||| |||||||||||||| Sbjct: 353 gttctcagaaagtggatcatcagggtttggagcactaagaagtgcttggatactcaaaag 412
>dbj|AP006074.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT40O02, TM0111b, complete sequence Length = 92724 Score = 73.8 bits (37), Expect = 5e-10 Identities = 73/85 (85%) Strand = Plus / Plus Query: 301 ctgtttcaacagcttctgcctcattggatttccagtgcttggcaatgttttcagagagag 360 ||||||||||||| || |||||||| |||||||| |||||||||||||| ||||| || | Sbjct: 15235 ctgtttcaacagcctcggcctcattagatttccaatgcttggcaatgttctcagaaagtg 15294 Query: 361 ggtcatctggatttggtgcacttaa 385 | ||||| || || || |||||||| Sbjct: 15295 gatcatcagggttaggcgcacttaa 15319 Score = 63.9 bits (32), Expect = 5e-07 Identities = 65/76 (85%) Strand = Plus / Plus Query: 399 ctcaaaagaactgttcgaatctgaagagccggactccatttatccttgagaatgtcaagg 458 |||||||| || || ||||||||||| || |||||||| ||||| || ||||| ||||| Sbjct: 15981 ctcaaaagtacagtacgaatctgaagtgcaggactccacttatctttcagaatatcaaga 16040 Query: 459 catatcctaccaagct 474 |||||||| ||||||| Sbjct: 16041 catatcctgccaagct 16056 Score = 50.1 bits (25), Expect = 0.008 Identities = 34/37 (91%) Strand = Plus / Plus Query: 480 atgttgggatgatatattttggtcagaaacctaacct 516 ||||| ||||| |||||||| |||||||||||||||| Sbjct: 16136 atgtttggatggtatatttttgtcagaaacctaacct 16172
>gb|AY066206.1| Schmidtea mediterranea clone H.78.5h unknown mRNA sequence Length = 318 Score = 71.9 bits (36), Expect = 2e-09 Identities = 69/80 (86%) Strand = Plus / Plus Query: 363 tcatctggatttggtgcacttaagagtgcctggatactcaaaagaactgttcgaatctga 422 ||||| ||||| || |||||||| || ||||| ||| ||||||||| |||||||| ||| Sbjct: 230 tcatcaggattcggagcacttaaaagagcctgaatagacaaaagaacggttcgaatttga 289 Query: 423 agagccggactccatttatc 442 ||||| |||||||||||||| Sbjct: 290 agagcaggactccatttatc 309
>gb|AY135219.1| Pavlova lutheri ubiquitin-conjugating enzyme E2 (ubc1) mRNA, complete cds Length = 654 Score = 67.9 bits (34), Expect = 3e-08 Identities = 55/62 (88%) Strand = Plus / Minus Query: 426 gccggactccatttatccttgagaatgtcaaggcatatcctaccaagcttgtcaatgttg 485 ||||||||||| || |||||||||||||||||||| || | || ||||||||||||||| Sbjct: 342 gccggactccacttgtccttgagaatgtcaaggcagattcggccgagcttgtcaatgttg 283 Query: 486 gg 487 || Sbjct: 282 gg 281
>gb|AC005679.1|F9K20 Arabidopsis thaliana chromosome 1 BAC F9K20 sequence, complete sequence Length = 90425 Score = 67.9 bits (34), Expect = 3e-08 Identities = 64/74 (86%) Strand = Plus / Plus Query: 309 acagcttctgcctcattggatttccagtgcttggcaatgttttcagagagagggtcatct 368 ||||||||||||||||| ||||||||||| |||||||| ||||| || || |||||| Sbjct: 25851 acagcttctgcctcattactcttccagtgcttagcaatgttctcagaaagcggatcatct 25910 Query: 369 ggatttggtgcact 382 || ||||||||||| Sbjct: 25911 gggtttggtgcact 25924 Score = 48.1 bits (24), Expect = 0.030 Identities = 39/44 (88%) Strand = Plus / Plus Query: 473 cttgtcaatgttgggatgatatattttggtcagaaacctaacct 516 |||||||||||| ||||| ||||| || || ||||||||||||| Sbjct: 26200 cttgtcaatgttaggatggtatatctttgtgagaaacctaacct 26243
>dbj|AP006654.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT31E21, TM0340, complete sequence Length = 120480 Score = 67.9 bits (34), Expect = 3e-08 Identities = 70/82 (85%) Strand = Plus / Plus Query: 301 ctgtttcaacagcttctgcctcattggatttccagtgcttggcaatgttttcagagagag 360 ||||||||||||| || ||||||| || ||||| |||||||||||||| ||||| || | Sbjct: 95963 ctgtttcaacagcctcgacctcattagacttccaatgcttggcaatgttctcagaaagtg 96022 Query: 361 ggtcatctggatttggtgcact 382 | ||||| || ||||||||||| Sbjct: 96023 gatcatcagggtttggtgcact 96044 Score = 48.1 bits (24), Expect = 0.030 Identities = 63/76 (82%) Strand = Plus / Plus Query: 399 ctcaaaagaactgttcgaatctgaagagccggactccatttatccttgagaatgtcaagg 458 ||||||||||| || || |||||||| || |||||||| ||||| || || || || || Sbjct: 96555 ctcaaaagaacagtgcgtatctgaagggctggactccacttatctttaaggatatcgaga 96614 Query: 459 catatcctaccaagct 474 |||||||| ||||||| Sbjct: 96615 catatcctgccaagct 96630 Score = 40.1 bits (20), Expect = 7.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 477 tcaatgttgggatgatatattttggtcagaaa 508 |||||||| |||||||||||||| || ||||| Sbjct: 96706 tcaatgtttggatgatatatttttgttagaaa 96737
>gb|AY613903.1| Mesenchytraeus solifugus clone C138 ubiquitin E2N-like mRNA, partial sequence Length = 518 Score = 65.9 bits (33), Expect = 1e-07 Identities = 67/77 (87%), Gaps = 1/77 (1%) Strand = Plus / Minus Query: 429 ggactccatttatccttgagaatgtcaaggcatatcctaccaagcttgtc-aatgttggg 487 |||||||| || |||||||| ||||| || ||||| |||||||||||||| ||| || || Sbjct: 342 ggactccacttctccttgagtatgtccagacatattctaccaagcttgtctaatattagg 283 Query: 488 atgatatattttggtca 504 |||||||||||| |||| Sbjct: 282 atgatatatttttgtca 266
>gb|DQ160084.1| Taraxacum officinale TO71-1 (To71-1) mRNA, partial cds Length = 260 Score = 63.9 bits (32), Expect = 5e-07 Identities = 56/64 (87%) Strand = Plus / Minus Query: 465 ctaccaagcttgtcaatgttgggatgatatattttggtcagaaacctaacctttggggca 524 ||||||||||||||||||||||| || || ||||| || ||||||| |||||| || ||| Sbjct: 240 ctaccaagcttgtcaatgttggggtggtagatttttgtaagaaaccgaaccttgggagca 181 Query: 525 gcca 528 |||| Sbjct: 180 gcca 177
>emb|CT032368.1| Platynereis dumerilii EST IB0AAA39CA04EM1 Length = 877 Score = 63.9 bits (32), Expect = 5e-07 Identities = 65/76 (85%) Strand = Plus / Minus Query: 429 ggactccatttatccttgagaatgtcaaggcatatcctaccaagcttgtcaatgttggga 488 ||||||||||| || |||||||||||||| |||||||| ||||| || || || || ||| Sbjct: 381 ggactccatttgtctttgagaatgtcaagacatatccttccaagtttatctatattagga 322 Query: 489 tgatatattttggtca 504 ||||| ||||| |||| Sbjct: 321 tgataaattttcgtca 306
>emb|CT033232.1| Platynereis dumerilii EST IB0AAA24BH01EM1 Length = 950 Score = 58.0 bits (29), Expect = 3e-05 Identities = 56/65 (86%) Strand = Plus / Minus Query: 429 ggactccatttatccttgagaatgtcaaggcatatcctaccaagcttgtcaatgttggga 488 ||||||||||| || |||||||||||||| |||||||| ||||| || || || || ||| Sbjct: 358 ggactccatttgtctttgagaatgtcaagacatatccttccaagtttatctatattagga 299 Query: 489 tgata 493 ||||| Sbjct: 298 tgata 294
>emb|CT033086.1| Platynereis dumerilii EST IB0AAA27AC04EM1 Length = 958 Score = 58.0 bits (29), Expect = 3e-05 Identities = 56/65 (86%) Strand = Plus / Minus Query: 429 ggactccatttatccttgagaatgtcaaggcatatcctaccaagcttgtcaatgttggga 488 ||||||||||| || |||||||||||||| |||||||| ||||| || || || || ||| Sbjct: 361 ggactccatttgtctttgagaatgtcaagacatatccttccaagtttatctatattagga 302 Query: 489 tgata 493 ||||| Sbjct: 301 tgata 297
>emb|CT032842.1| Platynereis dumerilii EST IB0AAA30CF01EM1 Length = 789 Score = 58.0 bits (29), Expect = 3e-05 Identities = 56/65 (86%) Strand = Plus / Minus Query: 429 ggactccatttatccttgagaatgtcaaggcatatcctaccaagcttgtcaatgttggga 488 ||||||||||| || |||||||||||||| |||||||| ||||| || || || || ||| Sbjct: 363 ggactccatttgtctttgagaatgtcaagacatatccttccaagtttatctatattagga 304 Query: 489 tgata 493 ||||| Sbjct: 303 tgata 299
>emb|CT032812.1| Platynereis dumerilii EST IB0AAA31AC09EM1 Length = 901 Score = 58.0 bits (29), Expect = 3e-05 Identities = 56/65 (86%) Strand = Plus / Minus Query: 429 ggactccatttatccttgagaatgtcaaggcatatcctaccaagcttgtcaatgttggga 488 ||||||||||| || |||||||||||||| |||||||| ||||| || || || || ||| Sbjct: 358 ggactccatttgtctttgagaatgtcaagacatatccttccaagtttatctatattagga 299 Query: 489 tgata 493 ||||| Sbjct: 298 tgata 294
>gb|AY078063.2| Zea mays B transcriptional activator (b1) gene, b1-B' allele, exons 1 through 3 and partial cds Length = 107840 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Minus Query: 429 ggactccatttatccttgagaatgtcaaggcatatcctaccaag 472 ||||||||||| ||||| |||||||| ||||||||| ||||||| Sbjct: 41982 ggactccatttctccttaagaatgtcgaggcatatcataccaag 41939
>gb|AY814881.1| Schistosoma japonicum SJCHGC06271 protein mRNA, complete cds Length = 1039 Score = 56.0 bits (28), Expect = 1e-04 Identities = 85/104 (81%) Strand = Plus / Minus Query: 369 ggatttggtgcacttaagagtgcctggatactcaaaagaactgttcgaatctgaagagcc 428 ||||||||||||||||| | ||| |||||| || | ||| || || || |||||||| Sbjct: 422 ggatttggtgcacttaataatgcttggatagataataaaacagtgcgtatttgaagagcg 363 Query: 429 ggactccatttatccttgagaatgtcaaggcatatcctaccaag 472 |||||||||||||| || || || ||||| || ||||||||||| Sbjct: 362 ggactccatttatctttaaggatatcaagacaaatcctaccaag 319
>ref|XM_662316.1| Cryptosporidium hominis TU502 ubiquitin-conjugating enzyme (Chro.30262) partial mRNA Length = 453 Score = 52.0 bits (26), Expect = 0.002 Identities = 77/94 (81%) Strand = Plus / Minus Query: 429 ggactccatttatccttgagaatgtcaaggcatatcctaccaagcttgtcaatgttggga 488 |||||||||||||| || | ||| || || || || || ||||| |||||||| || ||| Sbjct: 287 ggactccatttatctttcaaaatatctagacaaattcttccaagtttgtcaatatttgga 228 Query: 489 tgatatattttggtcagaaacctaacctttgggg 522 || || ||||| || ||||||||||| ||||||| Sbjct: 227 tggtaaatttttgttagaaacctaacttttgggg 194
>ref|XM_790553.1| PREDICTED: Strongylocentrotus purpuratus similar to ubiquitin-conjugating enzyme E2N (homologous to yeast UBC13) (LOC590968), mRNA Length = 593 Score = 52.0 bits (26), Expect = 0.002 Identities = 77/94 (81%) Strand = Plus / Minus Query: 411 gttcgaatctgaagagccggactccatttatccttgagaatgtcaaggcatatcctacca 470 ||||||||||| ||||| || |||||||| || ||||| || ||||||||||| | || Sbjct: 387 gttcgaatctgcagagcggggctccatttgtctttgagtatatcaaggcatatacgtccc 328 Query: 471 agcttgtcaatgttgggatgatatattttggtca 504 | ||||||| || |||||||||||||| |||| Sbjct: 327 aatttgtcaacatttggatgatatatttttgtca 294
>ref|NM_067871.3| Caenorhabditis elegans UBiquitin Conjugating enzyme family member (ubc-13) (ubc-13) mRNA, complete cds Length = 841 Score = 48.1 bits (24), Expect = 0.030 Identities = 105/132 (79%) Strand = Plus / Minus Query: 404 aagaactgttcgaatctgaagagccggactccatttatccttgagaatgtcaaggcatat 463 |||||| || ||||| ||||||||||| |||||||||||||||||| || || || || Sbjct: 319 aagaaccgtgcgaatttgaagagccggcgaccatttatccttgagaatatcgagacaaat 260 Query: 464 cctaccaagcttgtcaatgttgggatgatatattttggtcagaaacctaacctttggggc 523 || || || || ||||| || |||||||| || || |||| || | ||| || || || Sbjct: 259 tctgccgagtttatcaatattcggatgatagatctttgtcatgaatcgaactttcggtgc 200 Query: 524 agccatcggata 535 |||||||||||| Sbjct: 199 agccatcggata 188
>gb|AF424651.1| Phytophthora infestans clone MY-07-B-10 ubiquitin-conjugating enzyme mRNA, complete cds Length = 595 Score = 46.1 bits (23), Expect = 0.12 Identities = 41/47 (87%) Strand = Plus / Minus Query: 441 tccttgagaatgtcaaggcatatcctaccaagcttgtcaatgttggg 487 |||||||| ||||| ||||| || | |||||||||||| |||||||| Sbjct: 311 tccttgaggatgtcgaggcagatgcgaccaagcttgtcgatgttggg 265
>gb|DQ321733.1| Schistosoma mansoni ubiquitin conjugating enzyme 13 mRNA, complete cds Length = 1042 Score = 46.1 bits (23), Expect = 0.12 Identities = 68/83 (81%) Strand = Plus / Minus Query: 420 tgaagagccggactccatttatccttgagaatgtcaaggcatatcctaccaagcttgtca 479 |||||||| |||||||||||||| || ||||| ||||| || || || ||||| ||| Sbjct: 325 tgaagagcaggactccatttatctttaagaatatcaagacaaattctgccaagacgatca 266 Query: 480 atgttgggatgatatattttggt 502 || || |||||||||| |||||| Sbjct: 265 atatttggatgatataatttggt 243
>ref|XM_637681.1| Dictyostelium discoideum hypothetical protein (DDB0169154), partial mRNA Length = 420 Score = 44.1 bits (22), Expect = 0.47 Identities = 34/38 (89%) Strand = Plus / Minus Query: 405 agaactgttcgaatctgaagagccggactccatttatc 442 ||||| |||| ||| |||||||| |||||||||||||| Sbjct: 269 agaacagttctaatttgaagagctggactccatttatc 232
>gb|AC116977.2| Dictyostelium discoideum chromosome 2 map 5515173-5817331 strain AX4, complete sequence Length = 302156 Score = 44.1 bits (22), Expect = 0.47 Identities = 34/38 (89%) Strand = Plus / Minus Query: 405 agaactgttcgaatctgaagagccggactccatttatc 442 ||||| |||| ||| |||||||| |||||||||||||| Sbjct: 240942 agaacagttctaatttgaagagctggactccatttatc 240905
>ref|XM_754740.1| Ustilago maydis 521 hypothetical protein (UM03686.1) partial mRNA Length = 507 Score = 44.1 bits (22), Expect = 0.47 Identities = 25/26 (96%) Strand = Plus / Minus Query: 468 ccaagcttgtcaatgttgggatgata 493 ||||||||||||||||| |||||||| Sbjct: 248 ccaagcttgtcaatgtttggatgata 223
>ref|XM_392901.2| PREDICTED: Apis mellifera similar to ENSANGP00000010475 (LOC409386), mRNA Length = 1196 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Minus Query: 363 tcatctggatttggtgcactta 384 |||||||||||||||||||||| Sbjct: 651 tcatctggatttggtgcactta 630
>gb|AC102152.12| Mus musculus chromosome 7, clone RP23-314H9, complete sequence Length = 206923 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 35 tgtactggagcatagaaagtt 55 ||||||||||||||||||||| Sbjct: 205874 tgtactggagcatagaaagtt 205854
>gb|AC163898.5| Mus musculus chromosome 7, clone RP24-108A5, complete sequence Length = 143726 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 35 tgtactggagcatagaaagtt 55 ||||||||||||||||||||| Sbjct: 54582 tgtactggagcatagaaagtt 54562
>gb|AC122401.3| Mus musculus chromosome 15 clone RP24-107E24, complete sequence Length = 188544 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 505 gaaacctaacctttggggcag 525 ||||||||||||||||||||| Sbjct: 139894 gaaacctaacctttggggcag 139874
>gb|AC155255.3| Mus musculus BAC clone RP24-143P3 from chromosome 12, complete sequence Length = 201217 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 35 tgtactggagcatagaaagtt 55 ||||||||||||||||||||| Sbjct: 8608 tgtactggagcatagaaagtt 8588
>gb|AC155311.2| Mus musculus BAC clone RP23-407F7 from chromosome 12, complete sequence Length = 166104 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 35 tgtactggagcatagaaagtt 55 ||||||||||||||||||||| Sbjct: 12657 tgtactggagcatagaaagtt 12677
>gb|AC131697.4| Mus musculus BAC clone RP23-407K12 from 1, complete sequence Length = 199589 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 35 tgtactggagcatagaaagtt 55 ||||||||||||||||||||| Sbjct: 84488 tgtactggagcatagaaagtt 84508
>ref|NM_001031153.1| Gallus gallus ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast) (UBE2D3), mRNA Length = 1961 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 357 agagggtcatctggatttgg 376 |||||||||||||||||||| Sbjct: 427 agagggtcatctggatttgg 408
>ref|NM_191107.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 447 Score = 40.1 bits (20), Expect = 7.4 Identities = 29/32 (90%) Strand = Plus / Minus Query: 432 ctccatttatccttgagaatgtcaaggcatat 463 ||||||| ||||| ||||||||||||||||| Sbjct: 281 ctccattgctccttaagaatgtcaaggcatat 250
>gb|BT016331.1| Zea mays clone Contig164 mRNA sequence Length = 860 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 444 ttgagaatgtcaaggcatat 463 |||||||||||||||||||| Sbjct: 369 ttgagaatgtcaaggcatat 350
>gb|AC007864.5| Trypanosoma brucei chromosome 2 clone RPCI93-28H13, complete sequence Length = 160498 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 480 atgttgggatgatatattttggtc 503 |||||||||||| ||||||||||| Sbjct: 49110 atgttgggatgaaatattttggtc 49133
>gb|AE017150.2| Trypanosoma brucei chromosome 2, complete sequence Length = 1193948 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 480 atgttgggatgatatattttggtc 503 |||||||||||| ||||||||||| Sbjct: 665439 atgttgggatgaaatattttggtc 665462
>gb|AC161751.3| Mus musculus BAC clone RP24-525E22 from chromosome y, complete sequence Length = 188482 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 146 tcatttagatacttccttcc 165 |||||||||||||||||||| Sbjct: 102703 tcatttagatacttccttcc 102722
>gb|AC027184.15| Mus musculus chromosome 14, clone RP23-138C14, complete sequence Length = 196806 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 174 catctccagtttgttcttta 193 |||||||||||||||||||| Sbjct: 191141 catctccagtttgttcttta 191122
>gb|AC092245.2| Drosophila melanogaster clone BACR32C03, complete sequence Length = 128623 Score = 40.1 bits (20), Expect = 7.4 Identities = 74/92 (80%) Strand = Plus / Minus Query: 363 tcatctggatttggtgcacttaagagtgcctggatactcaaaagaactgttcgaatctga 422 |||||||| ||||| ||||| || || |||||||| | |||||| || ||||| || Sbjct: 80602 tcatctgggtttggagcactcaacagggcctggatcgaaagaagaacggtacgaatttgc 80543 Query: 423 agagccggactccatttatccttgagaatgtc 454 | ||| ||||||||||||||||| || ||||| Sbjct: 80542 aaagcaggactccatttatccttcaggatgtc 80511
>gb|DQ443216.1| Bombyx mori ubiquitin conjugating enzyme E2 mRNA, complete cds Length = 1373 Score = 40.1 bits (20), Expect = 7.4 Identities = 29/32 (90%) Strand = Plus / Minus Query: 423 agagccggactccatttatccttgagaatgtc 454 ||||| |||||||||||||| || |||||||| Sbjct: 528 agagctggactccatttatctttaagaatgtc 497 Score = 40.1 bits (20), Expect = 7.4 Identities = 29/32 (90%) Strand = Plus / Minus Query: 486 ggatgatatattttggtcagaaacctaacctt 517 |||||||||||||| || | |||||||||||| Sbjct: 465 ggatgatatattttcgtgataaacctaacctt 434
>gb|AC084800.5| Mus musculus strain C57BL6/J chromosome 6 clone RP23-13A15, complete sequence Length = 213181 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 178 tccagtttgttctttaccaa 197 |||||||||||||||||||| Sbjct: 174244 tccagtttgttctttaccaa 174263
>gb|BT012849.1| Lycopersicon esculentum clone 113927F, mRNA sequence Length = 1269 Score = 40.1 bits (20), Expect = 7.4 Identities = 39/44 (88%), Gaps = 1/44 (2%) Strand = Plus / Minus Query: 478 caatgttgggatgatatattttggtcagaaacctaacctttggg 521 |||||||||||||| | || ||||||||||| ||||||||||| Sbjct: 582 caatgttgggatgaaaaatcttggtcagaaa-ataacctttggg 540
>gb|AC157994.2| Mus musculus BAC clone RP24-349B6 from chromosome 9, complete sequence Length = 226187 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 173 acatctccagtttgttcttt 192 |||||||||||||||||||| Sbjct: 80887 acatctccagtttgttcttt 80868
>ref|XM_946508.1| Trypanosoma brucei TREU927 ubiquitin-conjugating enzyme (Tb927.2.3720) partial mRNA Length = 756 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 480 atgttgggatgatatattttggtc 503 |||||||||||| ||||||||||| Sbjct: 245 atgttgggatgaaatattttggtc 222
>gb|AC114824.5| Mus musculus BAC clone RP23-342J11 from chromosome 17, complete sequence Length = 216044 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 348 ttttcagagagagggtcatc 367 |||||||||||||||||||| Sbjct: 53093 ttttcagagagagggtcatc 53074
>gb|BC043757.1| Xenopus laevis hypothetical protein MGC52908, mRNA (cDNA clone MGC:52908 IMAGE:4889409), complete cds Length = 1931 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 364 catctggatttggtgcactt 383 |||||||||||||||||||| Sbjct: 659 catctggatttggtgcactt 640
>ref|XM_949168.1| Theileria annulata strain Ankara ubiquitin-conjugating enzyme E2 (TA20510) partial mRNA Length = 459 Score = 40.1 bits (20), Expect = 7.4 Identities = 29/32 (90%) Strand = Plus / Minus Query: 429 ggactccatttatccttgagaatgtcaaggca 460 |||||||| || |||||||||||||| ||||| Sbjct: 284 ggactccacttgtccttgagaatgtcgaggca 253
>emb|CR652017.2|CNS0F22F Tetraodon nigroviridis full-length cDNA Length = 811 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 170 caaacatctccagtttgttc 189 |||||||||||||||||||| Sbjct: 506 caaacatctccagtttgttc 525
>emb|CR651319.2|CNS0F1J1 Tetraodon nigroviridis full-length cDNA Length = 747 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 170 caaacatctccagtttgttc 189 |||||||||||||||||||| Sbjct: 456 caaacatctccagtttgttc 475
>gb|AY135220.1| Pavlova lutheri ubiquitin-conjugating enzyme E2 (ubc2) mRNA, complete cds Length = 840 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 441 tccttgagaatgtcaaggca 460 |||||||||||||||||||| Sbjct: 382 tccttgagaatgtcaaggca 363
>ref|XM_501290.1| Yarrowia lipolytica CLIB122, YALI0C00561g predicted mRNA Length = 453 Score = 40.1 bits (20), Expect = 7.4 Identities = 29/32 (90%) Strand = Plus / Minus Query: 477 tcaatgttgggatgatatattttggtcagaaa 508 ||||||||||| || || |||||||||||||| Sbjct: 242 tcaatgttggggtggtagattttggtcagaaa 211
>emb|AL354863.29| Human DNA sequence from clone RP11-245J24 on chromosome 10 Contains a novel gene, complete sequence Length = 46765 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 158 ttccttccagcccaaacatctcca 181 |||||||||||||||||| ||||| Sbjct: 6622 ttccttccagcccaaacaactcca 6599
>gb|AC140280.3| Mus musculus BAC clone RP23-345I5 from chromosome 14, complete sequence Length = 205109 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 174 catctccagtttgttcttta 193 |||||||||||||||||||| Sbjct: 162402 catctccagtttgttcttta 162421
>emb|AL670928.7| Mouse DNA sequence from clone RP23-459G6 on chromosome 4, complete sequence Length = 125713 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 170 caaacatctccagtttgttc 189 |||||||||||||||||||| Sbjct: 69797 caaacatctccagtttgttc 69816
>emb|AJ719875.1| Gallus gallus mRNA for hypothetical protein, clone 7i20 Length = 1990 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 357 agagggtcatctggatttgg 376 |||||||||||||||||||| Sbjct: 427 agagggtcatctggatttgg 408
>gb|AY736121.1| Triticum aestivum ubiquitin-conjugating enzyme mRNA, complete cds Length = 460 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 441 tccttgagaatgtcaaggca 460 |||||||||||||||||||| Sbjct: 282 tccttgagaatgtcaaggca 263
>gb|DQ399457.1| Ictalurus punctatus clone SND02A cysteine and glycine-rich protein 1 mRNA, partial cds Length = 276 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 239 tacatcaagagcagcatggg 258 |||||||||||||||||||| Sbjct: 238 tacatcaagagcagcatggg 257
>gb|AY113266.1| Drosophila melanogaster AT16033 full insert cDNA Length = 592 Score = 40.1 bits (20), Expect = 7.4 Identities = 74/92 (80%) Strand = Plus / Minus Query: 363 tcatctggatttggtgcacttaagagtgcctggatactcaaaagaactgttcgaatctga 422 |||||||| ||||| ||||| || || |||||||| | |||||| || ||||| || Sbjct: 424 tcatctgggtttggagcactcaacagggcctggatcgaaagaagaacggtacgaatttgc 365 Query: 423 agagccggactccatttatccttgagaatgtc 454 | ||| ||||||||||||||||| || ||||| Sbjct: 364 aaagcaggactccatttatccttcaggatgtc 333
>ref|NM_135871.2| Drosophila melanogaster CG3473-RA (CG3473), mRNA Length = 655 Score = 40.1 bits (20), Expect = 7.4 Identities = 74/92 (80%) Strand = Plus / Minus Query: 363 tcatctggatttggtgcacttaagagtgcctggatactcaaaagaactgttcgaatctga 422 |||||||| ||||| ||||| || || |||||||| | |||||| || ||||| || Sbjct: 503 tcatctgggtttggagcactcaacagggcctggatcgaaagaagaacggtacgaatttgc 444 Query: 423 agagccggactccatttatccttgagaatgtc 454 | ||| ||||||||||||||||| || ||||| Sbjct: 443 aaagcaggactccatttatccttcaggatgtc 412
>gb|AE002160.2| Chlamydia muridarum Nigg, complete genome Length = 1072950 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 353 agagagagggtcatctggatttgg 376 |||||||||||| ||||||||||| Sbjct: 1039031 agagagagggtcttctggatttgg 1039054
>gb|AC160759.4| Mus musculus BAC clone RP23-333K15 from chromosome 16, complete sequence Length = 190127 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 460 atatcctaccaagcttgtca 479 |||||||||||||||||||| Sbjct: 44517 atatcctaccaagcttgtca 44498
>gb|AC133505.3| Mus musculus BAC clone RP24-176M20 from chromosome 16, complete sequence Length = 149947 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 460 atatcctaccaagcttgtca 479 |||||||||||||||||||| Sbjct: 22071 atatcctaccaagcttgtca 22090
>dbj|AP003446.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1529_G03 Length = 100635 Score = 40.1 bits (20), Expect = 7.4 Identities = 29/32 (90%) Strand = Plus / Minus Query: 432 ctccatttatccttgagaatgtcaaggcatat 463 ||||||| ||||| ||||||||||||||||| Sbjct: 62963 ctccattgctccttaagaatgtcaaggcatat 62932
>dbj|AK174260.1| Ciona intestinalis cDNA, clone:cicl015i02, full insert sequence Length = 833 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 357 agagggtcatctggatttgg 376 |||||||||||||||||||| Sbjct: 453 agagggtcatctggatttgg 434
>gb|AY104017.1| Zea mays PCO119482 mRNA sequence Length = 885 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 444 ttgagaatgtcaaggcatat 463 |||||||||||||||||||| Sbjct: 406 ttgagaatgtcaaggcatat 387
>gb|AE003644.4| Drosophila melanogaster chromosome 2L, section 53 of 83 of the complete sequence Length = 263306 Score = 40.1 bits (20), Expect = 7.4 Identities = 74/92 (80%) Strand = Plus / Plus Query: 363 tcatctggatttggtgcacttaagagtgcctggatactcaaaagaactgttcgaatctga 422 |||||||| ||||| ||||| || || |||||||| | |||||| || ||||| || Sbjct: 92473 tcatctgggtttggagcactcaacagggcctggatcgaaagaagaacggtacgaatttgc 92532 Query: 423 agagccggactccatttatccttgagaatgtc 454 | ||| ||||||||||||||||| || ||||| Sbjct: 92533 aaagcaggactccatttatccttcaggatgtc 92564
>gb|AF034946.1|AF034946 Zea mays ubiquitin conjugating enzyme (UBC) mRNA, complete cds Length = 781 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 444 ttgagaatgtcaaggcatat 463 |||||||||||||||||||| Sbjct: 309 ttgagaatgtcaaggcatat 290
>gb|BC110944.1| Xenopus laevis cDNA clone MGC:132133 IMAGE:6638005, complete cds Length = 1954 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 364 catctggatttggtgcactt 383 |||||||||||||||||||| Sbjct: 670 catctggatttggtgcactt 651
>emb|CR382129.1| Yarrowia lipolytica chromosome C of strain CLIB122 of Yarrowia lipolytica Length = 3272609 Score = 40.1 bits (20), Expect = 7.4 Identities = 29/32 (90%) Strand = Plus / Minus Query: 477 tcaatgttgggatgatatattttggtcagaaa 508 ||||||||||| || || |||||||||||||| Sbjct: 76782 tcaatgttggggtggtagattttggtcagaaa 76751
>emb|AL807748.10| Mouse DNA sequence from clone RP23-170A3 on chromosome 4, complete sequence Length = 170162 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 46 atagaaagttctatcagata 65 |||||||||||||||||||| Sbjct: 7501 atagaaagttctatcagata 7482 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,704,459 Number of Sequences: 3902068 Number of extensions: 4704459 Number of successful extensions: 115602 Number of sequences better than 10.0: 99 Number of HSP's better than 10.0 without gapping: 95 Number of HSP's successfully gapped in prelim test: 5 Number of HSP's that attempted gapping in prelim test: 115286 Number of HSP's gapped (non-prelim): 297 length of query: 545 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 522 effective length of database: 17,143,297,704 effective search space: 8948801401488 effective search space used: 8948801401488 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
