>PTPRZ_RAT (Q62656) Receptor-type tyrosine-protein phosphatase zeta precursor|
            (EC 3.1.3.48) (R-PTP-zeta) (Phosphacan) (3F8 chondroitin
            sulfate proteoglycan) (3H1 keratan sulfate proteoglycan)
          Length = 2316

 Score = 34.3 bits (77), Expect = 0.23
 Identities = 27/71 (38%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
 Frame = +3

Query: 333  MPSPPQIAPLTETPLREASRPMLLKPPRSPSSVSEQCVH*S--PILQGSPACPADPGSLH 506
            +PS P+   LTETP+ E S   +  P  S S+ S+  +H +  P+L  SP+    P SL 
Sbjct: 1207 LPSGPRDPVLTETPMVEQSSSSVSLPLASESASSKSTLHFTSVPVLNMSPS-DVHPTSLQ 1265

Query: 507  QEPVSQHSTEE 539
            +  V  HS EE
Sbjct: 1266 RLTV-PHSREE 1275

>CO7A1_HUMAN (Q02388) Collagen alpha-1(VII) chain precursor (Long-chain collagen)|
            (LC collagen)
          Length = 2944

 Score = 33.5 bits (75), Expect = 0.40
 Identities = 22/61 (36%), Positives = 26/61 (42%)
 Frame = -3

Query: 496  PGSAGHAGEPCSMGDQWTHCSETEDGLRGGFRSIGLEASRRGVSVRGAI*GGEGMHLPGR 317
            PGS G AG P + G      S    G RG     G    +      G + GGEG  LPGR
Sbjct: 1307 PGSPGRAGNPGTPGAPGLKGSPGLPGPRGDPGERGPRGPKGEPGAPGQVIGGEGPGLPGR 1366

Query: 316  R 314
            +
Sbjct: 1367 K 1367

>CSKI1_RAT (Q8VHK2) Caskin-1 (CASK-interacting protein 1)|
          Length = 1430

 Score = 31.6 bits (70), Expect = 1.5
 Identities = 26/76 (34%), Positives = 31/76 (40%), Gaps = 5/76 (6%)
 Frame = +3

Query: 321  PGRCMPSPPQIAPLTETPLREASRPMLLKPPRSPSSVSEQCVH*SPILQGSPACPAD--- 491
            P    P P  + PL   PL + S    +KPP SP  +  Q V     +QGSP  PA    
Sbjct: 1196 PPPAEPPPTDLMPLPPLPLPDGSARKPVKPPVSPKPILAQPV---SKIQGSPT-PASKKV 1251

Query: 492  --PGSLHQEPVSQHST 533
              PG    E    H T
Sbjct: 1252 PLPGPGSPEVKRAHGT 1267

>COLQ_RAT (O35167) Acetylcholinesterase collagenic tail peptide precursor|
           (AChE Q subunit) (Acetylcholinesterase-associated
           collagen)
          Length = 458

 Score = 31.2 bits (69), Expect = 2.0
 Identities = 24/71 (33%), Positives = 30/71 (42%)
 Frame = +3

Query: 285 IPLLHQIQ*GRRPGRCMPSPPQIAPLTETPLREASRPMLLKPPRSPSSVSEQCVH*SPIL 464
           +P L Q + G     C+  PP   PL   P    SR  LL P     ++ E     SP +
Sbjct: 37  LPGLDQKKRGNHKACCLLMPPP-PPLFPPPFFRGSRSPLLSPDMK--NLLELEASPSPCM 93

Query: 465 QGSPACPADPG 497
           QGS   P  PG
Sbjct: 94  QGSLGSPGPPG 104

>DOT1L_DROME (Q8INR6) Histone-lysine N-methyltransferase, H3 lysine-79 specific|
            (EC 2.1.1.43) (Histone H3-K79 methyltransferase)
            (H3-K79-HMTase) (Protein grappa) (DOT1-like protein)
            (dDOT1L)
          Length = 1848

 Score = 31.2 bits (69), Expect = 2.0
 Identities = 25/70 (35%), Positives = 31/70 (44%), Gaps = 4/70 (5%)
 Frame = +3

Query: 342  PPQIAPLTETPLREASRP----MLLKPPRSPSSVSEQCVH*SPILQGSPACPADPGSLHQ 509
            PPQ  PL   P   ++        ++PP  PSS S Q        Q SPA  A    L Q
Sbjct: 1290 PPQTQPLELLPRASSANSDYSGYRIRPPSRPSSNSSQ----PDYTQVSPAKMALRRHLSQ 1345

Query: 510  EPVSQHSTEE 539
            E +SQH T +
Sbjct: 1346 EKLSQHVTPQ 1355

>COLQ_MOUSE (O35348) Acetylcholinesterase collagenic tail peptide (AChE Q|
           subunit) (Acetylcholinesterase-associated collagen)
           (Fragment)
          Length = 236

 Score = 30.8 bits (68), Expect = 2.6
 Identities = 24/71 (33%), Positives = 30/71 (42%)
 Frame = +3

Query: 285 IPLLHQIQ*GRRPGRCMPSPPQIAPLTETPLREASRPMLLKPPRSPSSVSEQCVH*SPIL 464
           +P L Q + G     C+  PP   PL   P    SR  LL P     ++ E     SP +
Sbjct: 1   LPGLDQKKRGSHKACCLLMPPP-PPLFPPPFFRGSRSPLLSPDMK--NLLELEASPSPCI 57

Query: 465 QGSPACPADPG 497
           QGS   P  PG
Sbjct: 58  QGSLGSPGPPG 68

>MYO15_HUMAN (Q9UKN7) Myosin-15 (Myosin XV) (Unconventional myosin-15)|
          Length = 3530

 Score = 30.8 bits (68), Expect = 2.6
 Identities = 25/61 (40%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
 Frame = +3

Query: 336 PSPPQIAPLTETPLREASRPMLLKPPRSPSSVSEQCVH*SPILQGSPACPADP-GSLHQE 512
           P  PQ AP T +       P +  PPR PSS        SP L G P  PA P GSL + 
Sbjct: 644 PPAPQPAPRTLSHWSALLSPPV--PPRPPSSGPPPAPPLSPALSGLPR-PASPYGSLRRH 700

Query: 513 P 515
           P
Sbjct: 701 P 701

>RTN4_HUMAN (Q9NQC3) Reticulon-4 (Neurite outgrowth inhibitor) (Nogo protein)|
           (Foocen) (Neuroendocrine-specific protein) (NSP)
           (Neuroendocrine-specific protein C homolog) (RTN-x)
           (Reticulon-5)
          Length = 1192

 Score = 30.8 bits (68), Expect = 2.6
 Identities = 21/66 (31%), Positives = 28/66 (42%)
 Frame = +3

Query: 336 PSPPQIAPLTETPLREASRPMLLKPPRSPSSVSEQCVH*SPILQGSPACPADPGSLHQEP 515
           PSP   A ++ + L E   P    PP  P+SVS Q     P+       PA P S    P
Sbjct: 120 PSPLSAAAVSPSKLPEDDEPPARPPPPPPASVSPQA---EPVWTPPAPAPAAPPSTPAAP 176

Query: 516 VSQHST 533
             + S+
Sbjct: 177 KRRGSS 182

>CINA_GEOKA (Q5L0F7) CinA-like protein|
          Length = 414

 Score = 30.4 bits (67), Expect = 3.3
 Identities = 18/50 (36%), Positives = 25/50 (50%)
 Frame = -1

Query: 519 KQALGEVSQDLLDTQVNPAVWEISGHIVLKRRTDFEEASEASAWRLLAEV 370
           + AL     DL+D Q NP +  ++G   +  R   +   EA A RLL EV
Sbjct: 190 ESALETAIADLIDAQSNPTIAPLAGDGEVTLRLTAKHQDEAEAKRLLDEV 239

>TEGU_EHV1B (P28955) Large tegument protein|
          Length = 3421

 Score = 30.0 bits (66), Expect = 4.4
 Identities = 21/71 (29%), Positives = 30/71 (42%), Gaps = 2/71 (2%)
 Frame = +3

Query: 315  RRPGRCMPSPPQIAPLTETPLREAS--RPMLLKPPRSPSSVSEQCVH*SPILQGSPACPA 488
            R     MP+PP+  P+ E+  +  S  R   L P  +P   S+     S I+ G P    
Sbjct: 2476 RELSNAMPAPPKTTPVVESKQKSDSVDRAPTLPPKAAPLPPSDA----SAIMSGKPVFKY 2531

Query: 489  DPGSLHQEPVS 521
             PG+    P S
Sbjct: 2532 TPGNKSAVPPS 2542

>COLQ_HUMAN (Q9Y215) Acetylcholinesterase collagenic tail peptide precursor|
           (AChE Q subunit) (Acetylcholinesterase-associated
           collagen)
          Length = 456

 Score = 30.0 bits (66), Expect = 4.4
 Identities = 22/71 (30%), Positives = 29/71 (40%)
 Frame = +3

Query: 285 IPLLHQIQ*GRRPGRCMPSPPQIAPLTETPLREASRPMLLKPPRSPSSVSEQCVH*SPIL 464
           +P L Q + G     C+ +PP   PL   P     R  LL P      +  +    SP +
Sbjct: 37  LPSLDQKKRGGHKACCLLTPPP-PPLFPPPFFRGGRSPLLSPDMKNLMLELETSQ-SPCM 94

Query: 465 QGSPACPADPG 497
           QGS   P  PG
Sbjct: 95  QGSLGSPGPPG 105

>CO1A2_RAT (P02466) Collagen alpha-2(I) chain precursor|
          Length = 1372

 Score = 30.0 bits (66), Expect = 4.4
 Identities = 25/69 (36%), Positives = 29/69 (42%)
 Frame = -3

Query: 520 ETGSW*SEPGSAGHAGEPCSMGDQWTHCSETEDGLRGGFRSIGLEASRRGVSVRGAI*GG 341
           ETG+   EPGSAG  G P   G++    S  E G  G     GL  S     + GA    
Sbjct: 362 ETGNK-GEPGSAGAQGPPGPSGEEGKRGSPGEPGSAGPAGPPGLRGSPGSRGLPGADGRA 420

Query: 340 EGMHLPGRR 314
             M  PG R
Sbjct: 421 GVMGPPGNR 429

>CSKI1_HUMAN (Q8WXD9) Caskin-1 (CASK-interacting protein 1)|
          Length = 1431

 Score = 30.0 bits (66), Expect = 4.4
 Identities = 21/52 (40%), Positives = 22/52 (42%)
 Frame = +3

Query: 321  PGRCMPSPPQIAPLTETPLREASRPMLLKPPRSPSSVSEQCVH*SPILQGSP 476
            P    P P  +A L   P  E       KPP SP  V  Q V   P LQGSP
Sbjct: 1195 PPPAEPPPTDLAHLPPLPPPEGEARKPAKPPVSPKPVLTQPV---PKLQGSP 1243

>MILK1_HUMAN (Q8N3F8) Molecule interacting with Rab13 (MIRab13) (MICAL-like|
           protein 1)
          Length = 863

 Score = 30.0 bits (66), Expect = 4.4
 Identities = 20/62 (32%), Positives = 27/62 (43%), Gaps = 1/62 (1%)
 Frame = +3

Query: 321 PGRCMPSPP-QIAPLTETPLREASRPMLLKPPRSPSSVSEQCVH*SPILQGSPACPADPG 497
           P    PSP   +  L+     + +   LL+PP  P S SE  VH       +P  P +P 
Sbjct: 500 PPSATPSPALSVESLSSESASQTAGAELLEPPAVPKSSSEPAVH-------APGTPGNPV 552

Query: 498 SL 503
           SL
Sbjct: 553 SL 554

>SHAN1_RAT (Q9WV48) SH3 and multiple ankyrin repeat domains protein 1 (Shank1)|
            (GKAP/SAPAP-interacting protein) (SPANK-1) (Synamon)
            (Somatostatin receptor-interacting protein)
            (SSTR-interacting protein) (SSTRIP)
          Length = 2167

 Score = 29.3 bits (64), Expect = 7.5
 Identities = 20/62 (32%), Positives = 28/62 (45%), Gaps = 4/62 (6%)
 Frame = +3

Query: 321  PGRCMPSPPQIAPLTETPLREASRPMLLKPP----RSPSSVSEQCVH*SPILQGSPACPA 488
            P   +P PP  A    TPL  A  P +   P     + SS++      + + QG+PA P 
Sbjct: 1594 PPHPLPDPPSPA----TPLPAAPPPAVAAAPPTLDSTASSLTSYDSEVATLTQGAPAAPG 1649

Query: 489  DP 494
            DP
Sbjct: 1650 DP 1651

>MACF1_MOUSE (Q9QXZ0) Microtubule-actin crosslinking factor 1 (Actin cross-linking|
            family 7)
          Length = 5327

 Score = 29.3 bits (64), Expect = 7.5
 Identities = 17/50 (34%), Positives = 25/50 (50%)
 Frame = -1

Query: 507  GEVSQDLLDTQVNPAVWEISGHIVLKRRTDFEEASEASAWRLLAEVSLSE 358
            G  S+D++  + +     ISG  VL+   +FEE  E SA R L    L +
Sbjct: 1861 GSFSEDVISHKGDLRFVTISGQKVLETENNFEEGQEPSATRNLVNEKLKD 1910

>POLG_YEFV2 (P19901) Genome polyprotein [Contains: Capsid protein C (Core|
            protein); Envelope protein M (Matrix protein); Major
            envelope protein E; Nonstructural protein 1 (NS1);
            Nonstructural protein 2A (NS2A); Flavivirin protease NS2B
            regulatory subunit;
          Length = 3411

 Score = 29.3 bits (64), Expect = 7.5
 Identities = 14/26 (53%), Positives = 17/26 (65%)
 Frame = -3

Query: 439  CSETEDGLRGGFRSIGLEASRRGVSV 362
            C   EDG+ G F+S  L AS+RGV V
Sbjct: 1501 CEHLEDGIYGIFQSTFLGASQRGVGV 1526

>POLG_YEFV1 (P03314) Genome polyprotein [Contains: Capsid protein C (Core|
            protein); Envelope protein M (Matrix protein); Major
            envelope protein E; Nonstructural protein 1 (NS1);
            Nonstructural protein 2A (NS2A); Flavivirin protease NS2B
            regulatory subunit;
          Length = 3411

 Score = 29.3 bits (64), Expect = 7.5
 Identities = 14/26 (53%), Positives = 17/26 (65%)
 Frame = -3

Query: 439  CSETEDGLRGGFRSIGLEASRRGVSV 362
            C   EDG+ G F+S  L AS+RGV V
Sbjct: 1501 CEHLEDGIYGIFQSTFLGASQRGVGV 1526

>CO9A1_CHICK (P12106) Collagen alpha-1(IX) chain precursor|
          Length = 920

 Score = 29.3 bits (64), Expect = 7.5
 Identities = 16/46 (34%), Positives = 22/46 (47%)
 Frame = -3

Query: 493 GSAGHAGEPCSMGDQWTHCSETEDGLRGGFRSIGLEASRRGVSVRG 356
           G  G AGEP   G+Q    SE + G +G    +GL  ++  V   G
Sbjct: 662 GDRGSAGEPGPKGEQGAPGSEGDAGEKGDLGDMGLPGAKGSVGNPG 707

>ACSA2_ACEXY (Q59167) Cellulose synthase 2 [Includes: Cellulose synthase|
           catalytic subunit [UDP-forming] (EC 2.4.1.12); Cyclic
           di-GMP-binding domain (Cellulose synthase 2 regulatory
           domain)]
          Length = 1596

 Score = 29.3 bits (64), Expect = 7.5
 Identities = 17/66 (25%), Positives = 31/66 (46%)
 Frame = +3

Query: 318 RPGRCMPSPPQIAPLTETPLREASRPMLLKPPRSPSSVSEQCVH*SPILQGSPACPADPG 497
           +P   +P+PPQIAP +   L  A+  + L    +   + E+    + +   SP    + G
Sbjct: 798 QPPGTLPTPPQIAPASAGELLPAATAVSLPTGPATQQMRERLSERTGVSPASPFGDTNTG 857

Query: 498 SLHQEP 515
           +L  +P
Sbjct: 858 ALPADP 863

>LRP8_MOUSE (Q924X6) Low-density lipoprotein receptor-related protein 8|
           precursor (Apolipoprotein E receptor 2)
          Length = 996

 Score = 28.9 bits (63), Expect = 9.7
 Identities = 23/75 (30%), Positives = 31/75 (41%)
 Frame = +3

Query: 315 RRPGRCMPSPPQIAPLTETPLREASRPMLLKPPRSPSSVSEQCVH*SPILQGSPACPADP 494
           R PG  +  P      TETP + A+ P  +  PR+PS+              SP+ P+  
Sbjct: 792 RAPGTTIHDPTYQNHSTETPSQTAAAPHSVNVPRAPST--------------SPSTPSPA 837

Query: 495 GSLHQEPVSQHSTEE 539
            S H    SQH   E
Sbjct: 838 TSNH----SQHYGNE 848

>LAT_HUMAN (O43561) Linker for activation of T-cells family member 1 (36 kDa|
           phospho-tyrosine adapter protein) (pp36) (p36-38)
          Length = 262

 Score = 28.9 bits (63), Expect = 9.7
 Identities = 16/36 (44%), Positives = 19/36 (52%)
 Frame = +3

Query: 315 RRPGRCMPSPPQIAPLTETPLREASRPMLLKPPRSP 422
           +RP    P PP   P+T  P    S+P LL  PRSP
Sbjct: 52  KRPHTVAPWPPAYPPVTSYP--PLSQPDLLPIPRSP 85

>TIG_STRMU (Q8CWZ6) Trigger factor (TF)|
          Length = 427

 Score = 28.9 bits (63), Expect = 9.7
 Identities = 16/63 (25%), Positives = 26/63 (41%)
 Frame = -1

Query: 543 VFPQCYAEKQALGEVSQDLLDTQVNPAVWEISGHIVLKRRTDFEEASEASAWRLLAEVSL 364
           VF Q + E+    E    +L      AV E+   +V + + D +   +   W + AEV  
Sbjct: 53  VFNQKFGEEALYEEALNSILPAAYEEAVAELELDVVTQPKVDVKSMEKGKDWEITAEVVT 112

Query: 363 SEE 355
             E
Sbjct: 113 KPE 115

>ATX2_HUMAN (Q99700) Ataxin-2 (Spinocerebellar ataxia type 2 protein)|
           (Trinucleotide repeat-containing gene 13 protein)
          Length = 1312

 Score = 28.9 bits (63), Expect = 9.7
 Identities = 20/55 (36%), Positives = 22/55 (40%)
 Frame = +3

Query: 315 RRPGRCMPSPPQIAPLTETPLREASRPMLLKPPRSPSSVSEQCVH*SPILQGSPA 479
           R P R    P  + P   TP R  SRP   +P R PS          P   GSPA
Sbjct: 561 RPPSRYQSGPNSLPPRAATPTRPPSRPP-SRPSRPPS---------HPSAHGSPA 605

>YKR4_EBV (P30117) Hypothetical protein BKRF4|
          Length = 217

 Score = 28.9 bits (63), Expect = 9.7
 Identities = 21/64 (32%), Positives = 27/64 (42%)
 Frame = +3

Query: 318 RPGRCMPSPPQIAPLTETPLREASRPMLLKPPRSPSSVSEQCVH*SPILQGSPACPADPG 497
           R  R  PS  Q + LT TP    SRP    PPR P+         +P+   + A P  P 
Sbjct: 110 RSSRVSPSTQQSSGLTPTP--SFSRPRTRAPPRPPAP--------APVRGRASAPPRPPA 159

Query: 498 SLHQ 509
            + Q
Sbjct: 160 PVQQ 163

>MAP1B_HUMAN (P46821) Microtubule-associated protein 1B (MAP 1B) [Contains: MAP1|
           light chain LC1]
          Length = 2468

 Score = 28.9 bits (63), Expect = 9.7
 Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
 Frame = +3

Query: 315 RRPGRCMPSPPQIAPLTETPLREASRPMLLKP--PRSPSSVSEQCV 446
           + P + +   P+ A  + TPL EA +P  LKP  P+   SV +  V
Sbjct: 726 KEPKKEIKKLPKDAKKSSTPLSEAKKPAALKPKVPKKEESVKKDSV 771

>COLL6_MIMIV (Q5UQ50) Collagen-like protein 6|
          Length = 1387

 Score = 28.9 bits (63), Expect = 9.7
 Identities = 14/48 (29%), Positives = 23/48 (47%)
 Frame = -3

Query: 499 EPGSAGHAGEPCSMGDQWTHCSETEDGLRGGFRSIGLEASRRGVSVRG 356
           + G AG  GE   MG++     +  DG++G F S G +  +     +G
Sbjct: 312 DKGDAGKKGEKGEMGNKGDIGDKGNDGIKGDFGSKGYKGDKGSKGTKG 359


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 73,277,593
Number of Sequences: 219361
Number of extensions: 1436524
Number of successful extensions: 4669
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 4016
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4647
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4315578075
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)