>Y5224_ARATH (Q94EG6) Protein At5g02240|
          Length = 253

 Score = 45.1 bits (105), Expect = 4e-05
 Identities = 23/60 (38%), Positives = 37/60 (61%), Gaps = 4/60 (6%)
 Frame = -1

Query: 341 YTIVRPGPLQEEPGGQRALIFDQGXRISQA----ISCADVADICVKALHDSTARNKSFDV 174
           YTI+R G L ++ GG R L+  +   + Q     +  ADVA++C++AL    A+NK+FD+
Sbjct: 169 YTIIRAGGLLDKEGGVRELLVGKDDELLQTDTKTVPRADVAEVCIQALLFEEAKNKAFDL 228

>Y2766_ARATH (O80934) Protein At2g37660, chloroplast precursor|
          Length = 325

 Score = 43.5 bits (101), Expect = 1e-04
 Identities = 23/60 (38%), Positives = 38/60 (63%), Gaps = 4/60 (6%)
 Frame = -1

Query: 341 YTIVRPGPLQEEPGGQRALIFDQGXRI----SQAISCADVADICVKALHDSTARNKSFDV 174
           YTI+R G LQ++ GG R L+  +   +    ++ I+ ADVA++CV+AL    A+ K+ D+
Sbjct: 241 YTIIRAGGLQDKDGGIRELLVGKDDELLETETRTIARADVAEVCVQALQLEEAKFKALDL 300

>YL199_YEAST (Q05778) Protein YLR199C|
          Length = 276

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 17/70 (24%), Positives = 34/70 (48%)
 Frame = +3

Query: 105 SLIWQMSHKFIQXIPLLRNILIAYIKTFVSRRGIMQCFDTDICYIRTADSLRDSXSLIKD 284
           +L++ M   FI   P+  N++   I + +++      F  DI  I T+D +     + ++
Sbjct: 130 TLLFSMEENFISISPIFGNMISRSIISQLAQ------FSPDIIVIGTSDKIASMKVMTEN 183

Query: 285 QCTLTARFFL 314
           +CTL    F+
Sbjct: 184 ECTLQPPEFI 193

>RFC5_SCHPO (O94697) Probable activator 1 subunit 5 (Replication factor C|
           subunit 5) (Replication factor C5)
          Length = 358

 Score = 28.1 bits (61), Expect = 5.6
 Identities = 18/55 (32%), Positives = 29/55 (52%)
 Frame = -2

Query: 283 SLIKEXESLRLSAVRM*QISVSKHCMIPRRETKVLMYAMSMFLSKGMXCMNLWLI 119
           S+++E    R+ AVR     +  HC+ P   T +L   +S FLSK    ++ +LI
Sbjct: 264 SMLQEQSPARILAVRSMLYDLLSHCIPP---TTILKELLSFFLSKVDTKLHPYLI 315

>CLPX_LEGPL (Q5WVJ1) ATP-dependent Clp protease ATP-binding subunit clpX|
          Length = 424

 Score = 27.7 bits (60), Expect = 7.3
 Identities = 12/22 (54%), Positives = 13/22 (59%)
 Frame = +3

Query: 6   LQXEXYTHYDRI*HKSESGVXL 71
           L    Y HY R+ HKSE GV L
Sbjct: 87  LSVAVYNHYKRLQHKSEDGVEL 108

>CLPX_LEGPH (Q5ZUE0) ATP-dependent Clp protease ATP-binding subunit clpX|
          Length = 424

 Score = 27.7 bits (60), Expect = 7.3
 Identities = 12/22 (54%), Positives = 13/22 (59%)
 Frame = +3

Query: 6   LQXEXYTHYDRI*HKSESGVXL 71
           L    Y HY R+ HKSE GV L
Sbjct: 87  LSVAVYNHYKRLQHKSEDGVEL 108

>CLPX_LEGPA (Q5X452) ATP-dependent Clp protease ATP-binding subunit clpX|
          Length = 424

 Score = 27.7 bits (60), Expect = 7.3
 Identities = 12/22 (54%), Positives = 13/22 (59%)
 Frame = +3

Query: 6   LQXEXYTHYDRI*HKSESGVXL 71
           L    Y HY R+ HKSE GV L
Sbjct: 87  LSVAVYNHYKRLQHKSEDGVEL 108

>KI20A_MOUSE (P97329) Kinesin family member 20A (Rabkinesin-6) (Rab6-interacting|
           kinesin-like protein) (Kinesin-like protein 174)
          Length = 887

 Score = 27.7 bits (60), Expect = 7.3
 Identities = 13/40 (32%), Positives = 22/40 (55%)
 Frame = -2

Query: 253 LSAVRM*QISVSKHCMIPRRETKVLMYAMSMFLSKGMXCM 134
           ++A+R  Q + SK  +IP R++K+       F  +G  CM
Sbjct: 440 IAALRQNQQNRSKQNLIPFRDSKLTRVFQGFFTGRGRSCM 479

>IL20_MOUSE (Q9JKV9) Interleukin-20 precursor (IL-20) (Four alpha helix|
           cytokine ZCYTO10)
          Length = 176

 Score = 27.7 bits (60), Expect = 7.3
 Identities = 23/57 (40%), Positives = 29/57 (50%), Gaps = 5/57 (8%)
 Frame = +3

Query: 165 LIAYIKTFVSRRGIMQCFDT--DICYIRTADSLRDSXSLIKDQCTL---TARFFLQR 320
           L A  K F   R  +Q  DT  DI  +RT +SL+D  SL  D+C       RF+L R
Sbjct: 39  LQAIQKEFSEIRDSVQAEDTNIDIRILRTTESLKDIKSL--DRCCFLRHLVRFYLDR 93

>KI20A_HUMAN (O95235) Kinesin family member 20A (Rabkinesin-6) (Rab6-interacting|
           kinesin-like protein) (GG10_2)
          Length = 890

 Score = 27.3 bits (59), Expect = 9.6
 Identities = 12/40 (30%), Positives = 22/40 (55%)
 Frame = -2

Query: 253 LSAVRM*QISVSKHCMIPRRETKVLMYAMSMFLSKGMXCM 134
           ++A+R  Q + SK  ++P R++K+       F  +G  CM
Sbjct: 441 IAALRQNQQNRSKQNLVPFRDSKLTRVFQGFFTGRGRSCM 480


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 42,481,668
Number of Sequences: 219361
Number of extensions: 717172
Number of successful extensions: 1489
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1472
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1489
length of database: 80,573,946
effective HSP length: 90
effective length of database: 60,831,456
effective search space used: 1459954944
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)