ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal6n15
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK073222.1| Oryza sativa (japonica cultivar-group) cDNA clon... 165 2e-37
2gb|AY642926.1| Hordeum vulgare BAC CC24_14, complete sequence 143 6e-31
3gb|AC116949.11| Oryza sativa (japonica cultivar-group) chromosom... 113 5e-22
4dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 113 5e-22
5gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 113 5e-22
6gb|K02637.1|BLYAMYABD Hordeum vulgare alpha-amylase type B isozy... 72 2e-09
7ref|XM_472396.1| Oryza sativa (japonica cultivar-group), predic... 50 0.007
8emb|AL662947.3|OSJN00148 Oryza sativa genomic DNA, chromosome 4,... 50 0.007
9dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 50 0.007
10dbj|AK121649.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.007
11emb|X52103.1|TAEMG T.aestivum Em gene 44 0.42
12gb|AY121655.1| Drosophila melanogaster RE04029 full insert cDNA 44 0.42
13ref|NM_141274.1| Drosophila melanogaster CG2669-RA (CG2669), mRNA 44 0.42
14gb|AC007575.10| Drosophila melanogaster, chromosome 3R, region 8... 44 0.42
15gb|AC008190.7|AC008190 Drosophila melanogaster, chromosome 3R, r... 44 0.42
16gb|AE003603.4| Drosophila melanogaster chromosome 3R, section 5 ... 44 0.42
17ref|NM_115141.2| Arabidopsis thaliana hydrolase/ protein serine/... 42 1.7
18gb|AC125340.3| Mus musculus BAC clone RP24-364H15 from chromosom... 42 1.7
19emb|AL353912.1|ATF3C22 Arabidopsis thaliana DNA chromosome 3, BA... 42 1.7
20emb|BX908783.8| Zebrafish DNA sequence from clone DKEY-86M2 in l... 42 1.7
21emb|BX323796.14| Zebrafish DNA sequence from clone DKEY-106N21 i... 42 1.7
22gb|AF492667.1| Arabidopsis thaliana purple acid phosphatase (PAP... 42 1.7
23gb|DQ397597.1| Cenarchaeum symbiosum clone C05G09, complete sequ... 42 1.7
24emb|BX822817.1|CNS0A79J Arabidopsis thaliana Full-length cDNA Co... 42 1.7
25emb|BX822722.1|CNS0A78D Arabidopsis thaliana Full-length cDNA Co... 42 1.7
26emb|BX822589.1|CNS0A4UY Arabidopsis thaliana Full-length cDNA Co... 42 1.7
27gb|AC102611.10| Mus musculus chromosome 1, clone RP23-416O18, co... 40 6.6
28gb|AC140783.4| Mus musculus BAC clone RP24-253K16 from chromosom... 40 6.6
29gb|AC024746.1| Caenorhabditis elegans cosmid Y110A2AL, complete ... 40 6.6
30gb|AC137905.8| Mus musculus chromosome 15, clone RP23-334B11, co... 40 6.6
31emb|CR382283.8| Zebrafish DNA sequence from clone DKEYP-32G11 in... 40 6.6
32emb|BX571680.7| Zebrafish DNA sequence from clone DKEY-30L20 in ... 40 6.6
33emb|BX530085.3| Zebrafish DNA sequence from clone DKEY-18A21 in ... 40 6.6
34emb|BX677663.6| Zebrafish DNA sequence from clone DKEY-76N12 in ... 40 6.6
35ref|NM_182232.2| Caenorhabditis elegans Y110A2AL.4b (Y110A2AL.4)... 40 6.6
36ref|NM_061979.3| Caenorhabditis elegans Y110A2AL.4a (Y110A2AL.4)... 40 6.6
37emb|AL672214.8| Mouse DNA sequence from clone RP23-161C9 on chro... 40 6.6
38emb|AL928817.5| Zebrafish DNA sequence from clone CH211-244H4 in... 40 6.6
39emb|CR847788.7| Zebrafish DNA sequence from clone CH211-249H16 i... 40 6.6
40emb|CR318601.8| Zebrafish DNA sequence from clone CH211-274E20 i... 40 6.6
41emb|AL807829.21| Zebrafish DNA sequence from clone CH211-246M4 i... 40 6.6
42emb|BX088719.6| Zebrafish DNA sequence from clone CH211-207H2 in... 40 6.6 
>dbj|AK073222.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033024D09, full
            insert sequence
          Length = 1769

 Score =  165 bits (83), Expect = 2e-37
 Identities = 181/214 (84%)
 Strand = Plus / Minus

                                                                        
Query: 273  gccaagctctccagccagacctcgtcggccacggtggcgaacttgtcgtcgttacggtgc 332
            |||||||| | ||||||||||||||||   ||||||||||||| ||||||||| ||||||
Sbjct: 1436 gccaagctgtgcagccagacctcgtcgcggacggtggcgaactggtcgtcgttgcggtgc 1377

                                                                        
Query: 333  cacctccagacggcggttgtctngtttacaatcctcagtcgcccgtgtccgaagctcgcc 392
            ||| ||||||||||| | |||| ||| |  | |||||| |||||||| ||||||||||||
Sbjct: 1376 cacgtccagacggcgctcgtctcgttcaggaccctcagccgcccgtgcccgaagctcgcc 1317

                                                                        
Query: 393  tcacggaacaaggaaagcggcgccgacttgtgatccttgatgaatttggaagcaaggcct 452
            || | ||||   || ||  |||||||||||||  |||||||||| |||  ||||||||||
Sbjct: 1316 tccctgaactccgacaggtgcgccgacttgtgccccttgatgaacttgagagcaaggcct 1257

                                              
Query: 453  tccctgttgccaccatcgccgatggtgatgtaca 486
            ||||||||||| || ||||| |||||||||||||
Sbjct: 1256 tccctgttgcccccgtcgccaatggtgatgtaca 1223
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>gb|AY642926.1| Hordeum vulgare BAC CC24_14, complete sequence
          Length = 184425

 Score =  143 bits (72), Expect = 6e-31
 Identities = 99/107 (92%), Gaps = 1/107 (0%)
 Strand = Plus / Plus

                                                                          
Query: 29     ttgtgtgagcactaaagcc-tcgtcggcancacaaatgtgatgtcatgtgaaaatatatt 87
              ||||||||||||| | ||| |||||| || ||||||||||||||||||||||||||||||
Sbjct: 143920 ttgtgtgagcactgaggccatcgtcgacaacacaaatgtgatgtcatgtgaaaatatatt 143979

                                                             
Query: 88     gcgttcaaagcgtgtgttattttctcttccgttggaacacacgggct 134
               ||||||||||||||||||||||||||||| ||| ||||||||||||
Sbjct: 143980 acgttcaaagcgtgtgttattttctcttccattgcaacacacgggct 144026
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>gb|AC116949.11| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0040B10 map R2918, complete sequence
          Length = 149132

 Score =  113 bits (57), Expect = 5e-22
 Identities = 137/164 (83%)
 Strand = Plus / Plus

                                                                         
Query: 273   gccaagctctccagccagacctcgtcggccacggtggcgaacttgtcgtcgttacggtgc 332
             |||||||| | ||||||||||||||||   ||||||||||||| ||||||||| ||||||
Sbjct: 58876 gccaagctgtgcagccagacctcgtcgcggacggtggcgaactggtcgtcgttgcggtgc 58935

                                                                         
Query: 333   cacctccagacggcggttgtctngtttacaatcctcagtcgcccgtgtccgaagctcgcc 392
             ||| ||||||||||| | |||| ||| |  | |||||| |||||||| ||||||||||||
Sbjct: 58936 cacgtccagacggcgctcgtctcgttcaggaccctcagccgcccgtgcccgaagctcgcc 58995

                                                         
Query: 393   tcacggaacaaggaaagcggcgccgacttgtgatccttgatgaa 436
             || | ||||   || ||  |||||||||||||  ||||||||||
Sbjct: 58996 tccctgaactccgacaggtgcgccgacttgtgccccttgatgaa 59039



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 41/44 (93%)
 Strand = Plus / Plus

                                                         
Query: 443   agcaaggccttccctgttgccaccatcgccgatggtgatgtaca 486
             ||||||||||||||||||||| || ||||| |||||||||||||
Sbjct: 59399 agcaaggccttccctgttgcccccgtcgccaatggtgatgtaca 59442



 Score = 40.1 bits (20), Expect = 6.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 374   cccgtgtccgaagctcgcctcacggaac 401
             |||||| |||||||||||||| ||||||
Sbjct: 71581 cccgtgcccgaagctcgcctcccggaac 71554
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score =  113 bits (57), Expect = 5e-22
 Identities = 137/164 (83%)
 Strand = Plus / Plus

                                                                           
Query: 273     gccaagctctccagccagacctcgtcggccacggtggcgaacttgtcgtcgttacggtgc 332
               |||||||| | ||||||||||||||||   ||||||||||||| ||||||||| ||||||
Sbjct: 2406779 gccaagctgtgcagccagacctcgtcgcggacggtggcgaactggtcgtcgttgcggtgc 2406838

                                                                           
Query: 333     cacctccagacggcggttgtctngtttacaatcctcagtcgcccgtgtccgaagctcgcc 392
               ||| ||||||||||| | |||| ||| |  | |||||| |||||||| ||||||||||||
Sbjct: 2406839 cacgtccagacggcgctcgtctcgttcaggaccctcagccgcccgtgcccgaagctcgcc 2406898

                                                           
Query: 393     tcacggaacaaggaaagcggcgccgacttgtgatccttgatgaa 436
               || | ||||   || ||  |||||||||||||  ||||||||||
Sbjct: 2406899 tccctgaactccgacaggtgcgccgacttgtgccccttgatgaa 2406942



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 41/44 (93%)
 Strand = Plus / Plus

                                                           
Query: 443     agcaaggccttccctgttgccaccatcgccgatggtgatgtaca 486
               ||||||||||||||||||||| || ||||| |||||||||||||
Sbjct: 2407302 agcaaggccttccctgttgcccccgtcgccaatggtgatgtaca 2407345



 Score = 40.1 bits (20), Expect = 6.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                           
Query: 374     cccgtgtccgaagctcgcctcacggaac 401
               |||||| |||||||||||||| ||||||
Sbjct: 2419484 cccgtgcccgaagctcgcctcccggaac 2419457
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score =  113 bits (57), Expect = 5e-22
 Identities = 137/164 (83%)
 Strand = Plus / Plus

                                                                           
Query: 273     gccaagctctccagccagacctcgtcggccacggtggcgaacttgtcgtcgttacggtgc 332
               |||||||| | ||||||||||||||||   ||||||||||||| ||||||||| ||||||
Sbjct: 2414515 gccaagctgtgcagccagacctcgtcgcggacggtggcgaactggtcgtcgttgcggtgc 2414574

                                                                           
Query: 333     cacctccagacggcggttgtctngtttacaatcctcagtcgcccgtgtccgaagctcgcc 392
               ||| ||||||||||| | |||| ||| |  | |||||| |||||||| ||||||||||||
Sbjct: 2414575 cacgtccagacggcgctcgtctcgttcaggaccctcagccgcccgtgcccgaagctcgcc 2414634

                                                           
Query: 393     tcacggaacaaggaaagcggcgccgacttgtgatccttgatgaa 436
               || | ||||   || ||  |||||||||||||  ||||||||||
Sbjct: 2414635 tccctgaactccgacaggtgcgccgacttgtgccccttgatgaa 2414678



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 41/44 (93%)
 Strand = Plus / Plus

                                                           
Query: 443     agcaaggccttccctgttgccaccatcgccgatggtgatgtaca 486
               ||||||||||||||||||||| || ||||| |||||||||||||
Sbjct: 2415038 agcaaggccttccctgttgcccccgtcgccaatggtgatgtaca 2415081



 Score = 40.1 bits (20), Expect = 6.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                           
Query: 374     cccgtgtccgaagctcgcctcacggaac 401
               |||||| |||||||||||||| ||||||
Sbjct: 2427220 cccgtgcccgaagctcgcctcccggaac 2427193
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>gb|K02637.1|BLYAMYABD Hordeum vulgare alpha-amylase type B isozyme (Amy6-4) gene,
           complete cds
          Length = 2910

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 48/52 (92%)
 Strand = Plus / Plus

                                                               
Query: 81  atatattgcgttcaaagcgtgtgttattttctcttccgttggaacacacggg 132
           ||||||| |||||||||||||||||||||||||||| |||| ||| ||||||
Sbjct: 1   atatattacgttcaaagcgtgtgttattttctcttctgttgcaacgcacggg 52
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>ref|XM_472396.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1359

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                 
Query: 447  aggccttccctgttgccaccatcgccgatggtgatgt 483
            ||||||||||||||||| || ||||| ||||||||||
Sbjct: 1115 aggccttccctgttgccgccgtcgcctatggtgatgt 1079



 Score = 48.1 bits (24), Expect = 0.027
 Identities = 98/123 (79%)
 Strand = Plus / Minus

                                                                        
Query: 272  agccaagctctccagccagacctcgtcggccacggtggcgaacttgtcgtcgttacggtg 331
            ||||| |||||||||||||| |||||||  |||||||| |     ||||||||| |||||
Sbjct: 1290 agccaggctctccagccagatctcgtcgcgcacggtggagtcggcgtcgtcgttgcggtg 1231

                                                                        
Query: 332  ccacctccagacggcggttgtctngtttacaatcctcagtcgcccgtgtccgaagctcgc 391
            |||| |||||   ||||  |||  ||| || |  ||||| |||||||| |||||||||||
Sbjct: 1230 ccacgtccagcgcgcggcggtcgcgttcaccacgctcagccgcccgtgcccgaagctcgc 1171

               
Query: 392  ctc 394
            |||
Sbjct: 1170 ctc 1168
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>emb|AL662947.3|OSJN00148 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0073L04,
             complete sequence
          Length = 143301

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                                  
Query: 447   aggccttccctgttgccaccatcgccgatggtgatgt 483
             ||||||||||||||||| || ||||| ||||||||||
Sbjct: 23698 aggccttccctgttgccgccgtcgcctatggtgatgt 23734



 Score = 48.1 bits (24), Expect = 0.027
 Identities = 98/123 (79%)
 Strand = Plus / Plus

                                                                         
Query: 272   agccaagctctccagccagacctcgtcggccacggtggcgaacttgtcgtcgttacggtg 331
             ||||| |||||||||||||| |||||||  |||||||| |     ||||||||| |||||
Sbjct: 23436 agccaggctctccagccagatctcgtcgcgcacggtggagtcggcgtcgtcgttgcggtg 23495

                                                                         
Query: 332   ccacctccagacggcggttgtctngtttacaatcctcagtcgcccgtgtccgaagctcgc 391
             |||| |||||   ||||  |||  ||| || |  ||||| |||||||| |||||||||||
Sbjct: 23496 ccacgtccagcgcgcggcggtcgcgttcaccacgctcagccgcccgtgcccgaagctcgc 23555

                
Query: 392   ctc 394
             |||
Sbjct: 23556 ctc 23558
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                                     
Query: 447      aggccttccctgttgccaccatcgccgatggtgatgt 483
                ||||||||||||||||| || ||||| ||||||||||
Sbjct: 20293065 aggccttccctgttgccgccgtcgcctatggtgatgt 20293101



 Score = 48.1 bits (24), Expect = 0.027
 Identities = 98/123 (79%)
 Strand = Plus / Plus

                                                                            
Query: 272      agccaagctctccagccagacctcgtcggccacggtggcgaacttgtcgtcgttacggtg 331
                ||||| |||||||||||||| |||||||  |||||||| |     ||||||||| |||||
Sbjct: 20292803 agccaggctctccagccagatctcgtcgcgcacggtggagtcggcgtcgtcgttgcggtg 20292862

                                                                            
Query: 332      ccacctccagacggcggttgtctngtttacaatcctcagtcgcccgtgtccgaagctcgc 391
                |||| |||||   ||||  |||  ||| || |  ||||| |||||||| |||||||||||
Sbjct: 20292863 ccacgtccagcgcgcggcggtcgcgttcaccacgctcagccgcccgtgcccgaagctcgc 20292922

                   
Query: 392      ctc 394
                |||
Sbjct: 20292923 ctc 20292925
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>dbj|AK121649.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033060H09, full
            insert sequence
          Length = 1643

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                 
Query: 447  aggccttccctgttgccaccatcgccgatggtgatgt 483
            ||||||||||||||||| || ||||| ||||||||||
Sbjct: 1172 aggccttccctgttgccgccgtcgcctatggtgatgt 1136



 Score = 48.1 bits (24), Expect = 0.027
 Identities = 98/123 (79%)
 Strand = Plus / Minus

                                                                        
Query: 272  agccaagctctccagccagacctcgtcggccacggtggcgaacttgtcgtcgttacggtg 331
            ||||| |||||||||||||| |||||||  |||||||| |     ||||||||| |||||
Sbjct: 1347 agccaggctctccagccagatctcgtcgcgcacggtggagtcggcgtcgtcgttgcggtg 1288

                                                                        
Query: 332  ccacctccagacggcggttgtctngtttacaatcctcagtcgcccgtgtccgaagctcgc 391
            |||| |||||   ||||  |||  ||| || |  ||||| |||||||| |||||||||||
Sbjct: 1287 ccacgtccagcgcgcggcggtcgcgttcaccacgctcagccgcccgtgcccgaagctcgc 1228

               
Query: 392  ctc 394
            |||
Sbjct: 1227 ctc 1225
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>emb|X52103.1|TAEMG T.aestivum Em gene
          Length = 2465

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 58  cacaaatgtgatgtcatgtgaaaata 83
           ||||||||||||| ||||||||||||
Sbjct: 192 cacaaatgtgatgccatgtgaaaata 167
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>gb|AY121655.1| Drosophila melanogaster RE04029 full insert cDNA
          Length = 1940

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 274  ccaagctctccagccagacctcgtcg 299
            ||||||||||||||||| ||||||||
Sbjct: 1218 ccaagctctccagccagtcctcgtcg 1193
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>ref|NM_141274.1| Drosophila melanogaster CG2669-RA (CG2669), mRNA
          Length = 1925

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 274  ccaagctctccagccagacctcgtcg 299
            ||||||||||||||||| ||||||||
Sbjct: 1218 ccaagctctccagccagtcctcgtcg 1193
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>gb|AC007575.10| Drosophila melanogaster, chromosome 3R, region 82F-83A, BAC clone
              BACR42H10, complete sequence
          Length = 181009

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 274    ccaagctctccagccagacctcgtcg 299
              ||||||||||||||||| ||||||||
Sbjct: 107077 ccaagctctccagccagtcctcgtcg 107102
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>gb|AC008190.7|AC008190 Drosophila melanogaster, chromosome 3R, region 83A-83A, BAC clone
            BACR34M23, complete sequence
          Length = 158012

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 274  ccaagctctccagccagacctcgtcg 299
            ||||||||||||||||| ||||||||
Sbjct: 1645 ccaagctctccagccagtcctcgtcg 1670
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>gb|AE003603.4| Drosophila melanogaster chromosome 3R, section 5 of 118 of the complete
              sequence
          Length = 265289

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 274    ccaagctctccagccagacctcgtcg 299
              ||||||||||||||||| ||||||||
Sbjct: 227917 ccaagctctccagccagtcctcgtcg 227942
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>ref|NM_115141.2| Arabidopsis thaliana hydrolase/ protein serine/threonine phosphatase
            AT3G52810 mRNA, complete cds
          Length = 1494

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 39/45 (86%)
 Strand = Plus / Minus

                                                         
Query: 442  aagcaaggccttccctgttgccaccatcgccgatggtgatgtaca 486
            ||||||||||||| | ||||||||| || || ||||| |||||||
Sbjct: 1198 aagcaaggccttctcggttgccaccgtcaccaatggttatgtaca 1154
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>gb|AC125340.3| Mus musculus BAC clone RP24-364H15 from chromosome 1, complete sequence
          Length = 177161

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 428   cttgatgaatttggaagcaag 448
             |||||||||||||||||||||
Sbjct: 30510 cttgatgaatttggaagcaag 30530
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>emb|AL353912.1|ATF3C22 Arabidopsis thaliana DNA chromosome 3, BAC clone F3C22
          Length = 100028

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 39/45 (86%)
 Strand = Plus / Plus

                                                          
Query: 442   aagcaaggccttccctgttgccaccatcgccgatggtgatgtaca 486
             ||||||||||||| | ||||||||| || || ||||| |||||||
Sbjct: 91907 aagcaaggccttctcggttgccaccgtcaccaatggttatgtaca 91951
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>emb|BX908783.8| Zebrafish DNA sequence from clone DKEY-86M2 in linkage group 25, complete
              sequence
          Length = 216800

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 14     ttaaatgtgtggttattgtgt 34
              |||||||||||||||||||||
Sbjct: 113409 ttaaatgtgtggttattgtgt 113389
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>emb|BX323796.14| Zebrafish DNA sequence from clone DKEY-106N21 in linkage group 25,
              complete sequence
          Length = 204383

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 14     ttaaatgtgtggttattgtgt 34
              |||||||||||||||||||||
Sbjct: 132510 ttaaatgtgtggttattgtgt 132530
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>gb|AF492667.1| Arabidopsis thaliana purple acid phosphatase (PAP21) mRNA, complete
            cds
          Length = 1314

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 39/45 (86%)
 Strand = Plus / Minus

                                                         
Query: 442  aagcaaggccttccctgttgccaccatcgccgatggtgatgtaca 486
            ||||||||||||| | ||||||||| || || ||||| |||||||
Sbjct: 1105 aagcaaggccttctcggttgccaccgtcaccaatggttatgtaca 1061
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>gb|DQ397597.1| Cenarchaeum symbiosum clone C05G09, complete sequence
          Length = 38349

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 452   ttccctgttgccaccatcgcc 472
             |||||||||||||||||||||
Sbjct: 24947 ttccctgttgccaccatcgcc 24927
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>emb|BX822817.1|CNS0A79J Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTFB66ZC10 of Flowers and buds of strain col-0 of
            Arabidopsis thaliana (thale cress)
          Length = 1318

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 39/45 (86%)
 Strand = Plus / Minus

                                                         
Query: 442  aagcaaggccttccctgttgccaccatcgccgatggtgatgtaca 486
            ||||||||||||| | ||||||||| || || ||||| |||||||
Sbjct: 1023 aagcaaggccttctcggttgccaccgtcaccaatggttatgtaca 979
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>emb|BX822722.1|CNS0A78D Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTFB5ZD10 of Flowers and buds of strain col-0 of
            Arabidopsis thaliana (thale cress)
          Length = 1408

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 39/45 (86%)
 Strand = Plus / Minus

                                                         
Query: 442  aagcaaggccttccctgttgccaccatcgccgatggtgatgtaca 486
            ||||||||||||| | ||||||||| || || ||||| |||||||
Sbjct: 1115 aagcaaggccttctcggttgccaccgtcaccaatggttatgtaca 1071
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>emb|BX822589.1|CNS0A4UY Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTFB51ZA07 of Flowers and buds of strain col-0 of
            Arabidopsis thaliana (thale cress)
          Length = 1494

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 39/45 (86%)
 Strand = Plus / Minus

                                                         
Query: 442  aagcaaggccttccctgttgccaccatcgccgatggtgatgtaca 486
            ||||||||||||| | ||||||||| || || ||||| |||||||
Sbjct: 1198 aagcaaggccttctcggttgccaccgtcaccaatggttatgtaca 1154
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>gb|AC102611.10| Mus musculus chromosome 1, clone RP23-416O18, complete sequence
          Length = 210808

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 100   tgtgttattttctcttccgt 119
             ||||||||||||||||||||
Sbjct: 72591 tgtgttattttctcttccgt 72572
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>gb|AC140783.4| Mus musculus BAC clone RP24-253K16 from chromosome 15, complete sequence
          Length = 165903

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 16     aaatgtgtggttattgtgtg 35
              ||||||||||||||||||||
Sbjct: 153157 aaatgtgtggttattgtgtg 153176
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>gb|AC024746.1| Caenorhabditis elegans cosmid Y110A2AL, complete sequence
          Length = 59320

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 416  cgacttgtgatccttgatgaattt 439
            |||||||||| |||||||||||||
Sbjct: 3281 cgacttgtgagccttgatgaattt 3258
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>gb|AC137905.8| Mus musculus chromosome 15, clone RP23-334B11, complete sequence
          Length = 210548

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 16     aaatgtgtggttattgtgtg 35
              ||||||||||||||||||||
Sbjct: 115614 aaatgtgtggttattgtgtg 115633
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>emb|CR382283.8| Zebrafish DNA sequence from clone DKEYP-32G11 in linkage group 7,
             complete sequence
          Length = 145013

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 78    aaaatatattgcgttcaaag 97
             ||||||||||||||||||||
Sbjct: 25594 aaaatatattgcgttcaaag 25613
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>emb|BX571680.7| Zebrafish DNA sequence from clone DKEY-30L20 in linkage group 7,
             complete sequence
          Length = 145338

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 78    aaaatatattgcgttcaaag 97
             ||||||||||||||||||||
Sbjct: 39773 aaaatatattgcgttcaaag 39792
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>emb|BX530085.3| Zebrafish DNA sequence from clone DKEY-18A21 in linkage group 14,
             complete sequence
          Length = 227326

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 78    aaaatatattgcgttcaaag 97
             ||||||||||||||||||||
Sbjct: 21955 aaaatatattgcgttcaaag 21974
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>emb|BX677663.6| Zebrafish DNA sequence from clone DKEY-76N12 in linkage group 2, complete
              sequence
          Length = 143503

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 78     aaaatatattgcgttcaaag 97
              ||||||||||||||||||||
Sbjct: 125804 aaaatatattgcgttcaaag 125823
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>ref|NM_182232.2| Caenorhabditis elegans Y110A2AL.4b (Y110A2AL.4) mRNA, complete cds
          Length = 537

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 416 cgacttgtgatccttgatgaattt 439
           |||||||||| |||||||||||||
Sbjct: 207 cgacttgtgagccttgatgaattt 184
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>ref|NM_061979.3| Caenorhabditis elegans Y110A2AL.4a (Y110A2AL.4) mRNA, complete cds
          Length = 910

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 416 cgacttgtgatccttgatgaattt 439
           |||||||||| |||||||||||||
Sbjct: 379 cgacttgtgagccttgatgaattt 356
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>emb|AL672214.8| Mouse DNA sequence from clone RP23-161C9 on chromosome X, complete
            sequence
          Length = 47355

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 16   aaatgtgtggttattgtgtg 35
            ||||||||||||||||||||
Sbjct: 3247 aaatgtgtggttattgtgtg 3266
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>emb|AL928817.5| Zebrafish DNA sequence from clone CH211-244H4 in linkage group 22,
             complete sequence
          Length = 153594

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 61    aaatgtgatgtcatgtgaaa 80
             ||||||||||||||||||||
Sbjct: 39384 aaatgtgatgtcatgtgaaa 39403
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>emb|CR847788.7| Zebrafish DNA sequence from clone CH211-249H16 in linkage group 10,
             complete sequence
          Length = 176964

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 78    aaaatatattgcgttcaaag 97
             ||||||||||||||||||||
Sbjct: 59244 aaaatatattgcgttcaaag 59263
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>emb|CR318601.8| Zebrafish DNA sequence from clone CH211-274E20 in linkage group 7,
              complete sequence
          Length = 165501

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 78     aaaatatattgcgttcaaag 97
              ||||||||||||||||||||
Sbjct: 116260 aaaatatattgcgttcaaag 116279
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>emb|AL807829.21| Zebrafish DNA sequence from clone CH211-246M4 in linkage group 9,
             complete sequence
          Length = 166114

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 78    aaaatatattgcgttcaaag 97
             ||||||||||||||||||||
Sbjct: 13558 aaaatatattgcgttcaaag 13577
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>emb|BX088719.6| Zebrafish DNA sequence from clone CH211-207H2 in linkage group 17,
              complete sequence
          Length = 205685

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 78     aaaatatattgcgttcaaag 97
              ||||||||||||||||||||
Sbjct: 150171 aaaatatattgcgttcaaag 150152


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,612,339
Number of Sequences: 3902068
Number of extensions: 3612339
Number of successful extensions: 67262
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 67115
Number of HSP's gapped (non-prelim): 143
length of query: 488
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 466
effective length of database: 17,147,199,772
effective search space: 7990595093752
effective search space used: 7990595093752
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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