>MAN1_HUMAN (Q9Y2U8) Inner nuclear membrane protein Man1 (LEM domain containing|
protein 3)
Length = 911
Score = 27.7 bits (60), Expect = 8.8
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = +1
Query: 79 GLGADGEEADPGSEAAVESSRHRLGARVFVWS 174
G G DGEE DP +E + +SR G+R+ +S
Sbjct: 222 GEGEDGEERDPETEEPLWASRTVNGSRLVPYS 253
Database: uniprot_sprot.fasta
Posted date: May 25, 2006 5:36 PM
Number of letters in database: 80,573,946
Number of sequences in database: 219,361
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,239,988
Number of Sequences: 219361
Number of extensions: 271001
Number of successful extensions: 867
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 846
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 867
length of database: 80,573,946
effective HSP length: 34
effective length of database: 73,115,672
effective search space used: 1754776128
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)