ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal17g06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AF218627.1|AF218627 Hordeum vulgare plasma membrane associate... 912 0.0
2gb|U80037.1|TAU80037 Triticum aestivum ABA induced plasma membra... 149 1e-32
3gb|AY103744.1| Zea mays PCO126369 mRNA sequence 137 4e-29
4ref|XM_475170.1| Oryza sativa (japonica cultivar-group), predic... 123 6e-25
5gb|BT016404.1| Zea mays clone Contig237 mRNA sequence 123 6e-25
6gb|AC136222.2| Oryza sativa (japonica cultivar-group) chromosome... 123 6e-25
7dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 123 6e-25
8dbj|AK102039.1| Oryza sativa (japonica cultivar-group) cDNA clon... 123 6e-25
9ref|XM_477728.1| Oryza sativa (japonica cultivar-group), mRNA 121 3e-24
10dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 121 3e-24
11dbj|AP005831.5| Oryza sativa (japonica cultivar-group) genomic D... 121 3e-24
12dbj|AP005248.4| Oryza sativa (japonica cultivar-group) genomic D... 121 3e-24
13dbj|AK063592.1| Oryza sativa (japonica cultivar-group) cDNA clon... 121 3e-24
14gb|U57639.1|OSU57639 Oryza sativa hydrophobic LEA-like protein m... 121 3e-24
15ref|NM_196907.1| Oryza sativa (japonica cultivar-group) unknown ... 42 1.9
16ref|XM_675255.1| Plasmodium berghei strain ANKA DEAD/DEAH box he... 42 1.9
17gb|AC027038.12| Oryza sativa chromosome 10 BAC OSJNBa0071K18 gen... 42 1.9
18dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.9
19gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 42 1.9
20gb|AC134045.2| Oryza sativa (japonica cultivar-group) chromosome... 40 7.4
21gb|AC132492.3| Oryza sativa (japonica cultivar-group) chromosome... 40 7.4
22gb|AC135418.3| Oryza sativa (japonica cultivar-group) chromosome... 40 7.4
23gb|AY753660.1| Capsella bursa-pastoris LEAFY protein (LEAFY) gen... 40 7.4
24ref|XM_390706.1| Gibberella zeae PH-1 chromosome 1 hypothetical ... 40 7.4
25gb|L78799.1|CCRFTSA Caulobacter vibrioides FtsA (ftsA) gene, com... 40 7.4
26gb|AC125093.4| Mus musculus BAC clone RP24-176F8 from chromosome... 40 7.4
27gb|AC124169.3| Mus musculus BAC clone RP23-151G15 from 19, compl... 40 7.4
28ref|XM_970550.1| PREDICTED: Tribolium castaneum similar to CG327... 40 7.4
29gb|AE005922.1| Caulobacter crescentus CB15 section 248 of 359 of... 40 7.4
30gb|AC158313.7| Mus musculus chromosome 8, clone RP23-246H16, com... 40 7.4
31dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.4
32dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.4
33gb|AE004673.1| Pseudomonas aeruginosa PAO1, section 234 of 529 o... 40 7.4
34dbj|AP004047.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.4
35dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete g... 40 7.4
36emb|AJ132503.1|MXA132503 Myxococcus xanthus taB, taC, taD, taE a... 40 7.4
37emb|AJ937741.1| Streptomyces ambofaciens ATCC 23877 right termin... 40 7.4
38emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome comple... 40 7.4
39emb|AJ937740.1| Streptomyces ambofaciens ATCC 23877 left termina... 40 7.4
40gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 40 7.4 
>gb|AF218627.1|AF218627 Hordeum vulgare plasma membrane associated protein (pm19) mRNA,
           complete cds
          Length = 1000

 Score =  912 bits (460), Expect = 0.0
 Identities = 514/529 (97%), Gaps = 4/529 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   tttataaaa-actagcaagnaaccccggtagtacaacatgcatgtacgtgcgtatgtaat 59
           ||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 963 tttataaaacactagcaag-aaccccggtagtacaacatgcatgtacgtgcgtatgtaat 905

                                                                       
Query: 60  accaggtccccctnnnnnnn-gaagggaaccatgagtagtacatgcgtgccatgctcaca 118
           |||||||||||||        |||||||||||||||||||||||||||||||||||||||
Sbjct: 904 accaggtccccctaaaaaaaagaagggaaccatgagtagtacatgcgtgccatgctcaca 845

                                                                       
Query: 119 cacataccccactgccatgccatggatcgacgatgcatacaacctactcttctgctctct 178
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 844 cacataccccactgccatgccatggatcgacgatgcatacaacctactcttctgctctct 785

                                                                       
Query: 179 aaccgtacgtgacacaactaacacaaatacgtactagtacagtacaacgtattatccacc 238
           |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 784 aaccgtacgtgacacaactaacacaaatacgtactagtacagtacaacttattatccacc 725

                                                                       
Query: 239 cgtcgcttgccacggccaagtcttatcctatttagacccttgcgacgccgccggtgccca 298
           ||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||
Sbjct: 724 cgtcgcttgccacggccaagtct-atcctatttagacccttgccacgccgccggtgccca 666

                                                                       
Query: 299 tgcccttgttgtggtggtcaccgacgccggcgccgtaagcgtgctccgccggatacccac 358
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 665 tgcccttgttgtggtggtcaccgacgccggcgccgtaagcgtgctccgccggatacccac 606

                                                                       
Query: 359 cattgttattaccaaactggttcccgaagagcccagagtggagagcaagcacgtacagga 418
           |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 605 cattgttattaccaaactggtttccgaagagcccagagtggagagcaagcacgtacagga 546

                                                                       
Query: 419 gctgcgtgaaggcgaggatgatgacgaacgcctccagcaccctgaggcgccacccccggt 478
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 545 gctgcgtgaaggcgaggatgatgacgaacgcctccagcaccctgaggcgccacccccggt 486

                                                            
Query: 479 acccgccgacgtggatctccttgcacgccagcccgaaggccaaggcggt 527
           ||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 485 acccgccgacgtggatctccttgcacgccagcccgaacgccaaggcggt 437
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>gb|U80037.1|TAU80037 Triticum aestivum ABA induced plasma membrane protein PM-19
           (WTABAPM) mRNA, complete cds
          Length = 1094

 Score =  149 bits (75), Expect = 1e-32
 Identities = 141/163 (86%)
 Strand = Plus / Minus

                                                                       
Query: 370 ccaaactggttcccgaagagcccagagtggagagcaagcacgtacaggagctgcgtgaag 429
           |||||||||||||||||||| || ||||| || || |||||||| || ||||||||||| 
Sbjct: 585 ccaaactggttcccgaagaggccggagtgcagcgcgagcacgtagagcagctgcgtgaac 526

                                                                       
Query: 430 gcgaggatgatgacgaacgcctccagcaccctgaggcgccacccccggtacccgccgacg 489
              |  ||||| ||||||||||||||||||||||||||||| || |||||||| || |  
Sbjct: 525 atcaaaatgatcacgaacgcctccagcaccctgaggcgccatccgcggtacccaccaata 466

                                                      
Query: 490 tggatctccttgcacgccagcccgaaggccaaggcggtaatcg 532
           || ||||||||||||||||||||||| ||||||||||||||||
Sbjct: 465 tgaatctccttgcacgccagcccgaacgccaaggcggtaatcg 423



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 37/38 (97%)
 Strand = Plus / Minus

                                                 
Query: 274 acccttgcgacgccgccggtgcccatgcccttgttgtg 311
           ||||| ||||||||||||||||||||||||||||||||
Sbjct: 684 accctcgcgacgccgccggtgcccatgcccttgttgtg 647
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>gb|AY103744.1| Zea mays PCO126369 mRNA sequence
          Length = 1385

 Score =  137 bits (69), Expect = 4e-29
 Identities = 102/113 (90%)
 Strand = Plus / Minus

                                                                       
Query: 406 agcacgtacaggagctgcgtgaaggcgaggatgatgacgaacgcctccagcaccctgagg 465
           |||||||| |||||||||||||||||||||||||||||||| ||||||||||| |  |||
Sbjct: 720 agcacgtagaggagctgcgtgaaggcgaggatgatgacgaaggcctccagcacgcgcagg 661

                                                                
Query: 466 cgccacccccggtacccgccgacgtggatctccttgcacgccagcccgaaggc 518
           ||||| || ||||  ||||||| ||||||||||||||| ||||||||||||||
Sbjct: 660 cgccagccgcggtgtccgccgatgtggatctccttgcaggccagcccgaaggc 608
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>ref|XM_475170.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 522

 Score =  123 bits (62), Expect = 6e-25
 Identities = 98/110 (89%)
 Strand = Plus / Minus

                                                                       
Query: 409 acgtacaggagctgcgtgaaggcgaggatgatgacgaacgcctccagcaccctgaggcgc 468
           ||||| || ||||||||||||||||||||||||||||| ||||| ||||| | |||||||
Sbjct: 407 acgtagagcagctgcgtgaaggcgaggatgatgacgaaggcctcgagcacgcggaggcgc 348

                                                             
Query: 469 cacccccggtacccgccgacgtggatctccttgcacgccagcccgaaggc 518
           ||||| ||||| ||||||| ||||||||||||||| || || ||||||||
Sbjct: 347 cacccgcggtagccgccgatgtggatctccttgcaggcgaggccgaaggc 298
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>gb|BT016404.1| Zea mays clone Contig237 mRNA sequence
          Length = 1259

 Score =  123 bits (62), Expect = 6e-25
 Identities = 102/114 (89%), Gaps = 1/114 (0%)
 Strand = Plus / Minus

                                                                       
Query: 406 agcacgtacaggagctgcgtgaaggcgaggatgatgacgaacgcctccagcaccctgagg 465
           |||||||| |||||||||||||||||||||||||||||||| ||||||||||| |  |||
Sbjct: 740 agcacgtagaggagctgcgtgaaggcgaggatgatgacgaaggcctccagcacgcgcagg 681

                                                                 
Query: 466 cgccacccccggtacccgccgacgtggatctccttgcacgcc-agcccgaaggc 518
           ||||| || ||||  ||||||| ||||||||||||||| ||| |||||||||||
Sbjct: 680 cgccagccgcggtgtccgccgatgtggatctccttgcaggccaagcccgaaggc 627
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>gb|AC136222.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0088M05, complete sequence
          Length = 153368

 Score =  123 bits (62), Expect = 6e-25
 Identities = 98/110 (89%)
 Strand = Plus / Plus

                                                                         
Query: 409   acgtacaggagctgcgtgaaggcgaggatgatgacgaacgcctccagcaccctgaggcgc 468
             ||||| || ||||||||||||||||||||||||||||| ||||| ||||| | |||||||
Sbjct: 78757 acgtagagcagctgcgtgaaggcgaggatgatgacgaaggcctcgagcacgcggaggcgc 78816

                                                               
Query: 469   cacccccggtacccgccgacgtggatctccttgcacgccagcccgaaggc 518
             ||||| ||||| ||||||| ||||||||||||||| || || ||||||||
Sbjct: 78817 cacccgcggtagccgccgatgtggatctccttgcaggcgaggccgaaggc 78866
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score =  123 bits (62), Expect = 6e-25
 Identities = 98/110 (89%)
 Strand = Plus / Plus

                                                                            
Query: 409      acgtacaggagctgcgtgaaggcgaggatgatgacgaacgcctccagcaccctgaggcgc 468
                ||||| || ||||||||||||||||||||||||||||| ||||| ||||| | |||||||
Sbjct: 18285545 acgtagagcagctgcgtgaaggcgaggatgatgacgaaggcctcgagcacgcggaggcgc 18285604

                                                                  
Query: 469      cacccccggtacccgccgacgtggatctccttgcacgccagcccgaaggc 518
                ||||| ||||| ||||||| ||||||||||||||| || || ||||||||
Sbjct: 18285605 cacccgcggtagccgccgatgtggatctccttgcaggcgaggccgaaggc 18285654



 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 492      gatctccttgcacgccagcc 511
                ||||||||||||||||||||
Sbjct: 19337410 gatctccttgcacgccagcc 19337391
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>dbj|AK102039.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033081F22, full
           insert sequence
          Length = 859

 Score =  123 bits (62), Expect = 6e-25
 Identities = 98/110 (89%)
 Strand = Plus / Minus

                                                                       
Query: 409 acgtacaggagctgcgtgaaggcgaggatgatgacgaacgcctccagcaccctgaggcgc 468
           ||||| || ||||||||||||||||||||||||||||| ||||| ||||| | |||||||
Sbjct: 494 acgtagagcagctgcgtgaaggcgaggatgatgacgaaggcctcgagcacgcggaggcgc 435

                                                             
Query: 469 cacccccggtacccgccgacgtggatctccttgcacgccagcccgaaggc 518
           ||||| ||||| ||||||| ||||||||||||||| || || ||||||||
Sbjct: 434 cacccgcggtagccgccgatgtggatctccttgcaggcgaggccgaaggc 385
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>ref|XM_477728.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 597

 Score =  121 bits (61), Expect = 3e-24
 Identities = 100/113 (88%)
 Strand = Plus / Minus

                                                                       
Query: 406 agcacgtacaggagctgcgtgaaggcgaggatgatgacgaacgcctccagcaccctgagg 465
           |||||||| || ||||||||||||||||||||||||||||| ||||| ||||| | ||||
Sbjct: 480 agcacgtagagcagctgcgtgaaggcgaggatgatgacgaaagcctcgagcacgcggagg 421

                                                                
Query: 466 cgccacccccggtacccgccgacgtggatctccttgcacgccagcccgaaggc 518
           |||||||| ||||  ||||||| ||||||||||||||| || || ||||||||
Sbjct: 420 cgccacccgcggtggccgccgatgtggatctccttgcaggcgaggccgaaggc 368
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score =  121 bits (61), Expect = 3e-24
 Identities = 100/113 (88%)
 Strand = Plus / Minus

                                                                            
Query: 406      agcacgtacaggagctgcgtgaaggcgaggatgatgacgaacgcctccagcaccctgagg 465
                |||||||| || ||||||||||||||||||||||||||||| ||||| ||||| | ||||
Sbjct: 13554841 agcacgtagagcagctgcgtgaaggcgaggatgatgacgaaagcctcgagcacgcggagg 13554782

                                                                     
Query: 466      cgccacccccggtacccgccgacgtggatctccttgcacgccagcccgaaggc 518
                |||||||| ||||  ||||||| ||||||||||||||| || || ||||||||
Sbjct: 13554781 cgccacccgcggtggccgccgatgtggatctccttgcaggcgaggccgaaggc 13554729
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>dbj|AP005831.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:B1123E10
          Length = 134641

 Score =  121 bits (61), Expect = 3e-24
 Identities = 100/113 (88%)
 Strand = Plus / Minus

                                                                          
Query: 406    agcacgtacaggagctgcgtgaaggcgaggatgatgacgaacgcctccagcaccctgagg 465
              |||||||| || ||||||||||||||||||||||||||||| ||||| ||||| | ||||
Sbjct: 134524 agcacgtagagcagctgcgtgaaggcgaggatgatgacgaaagcctcgagcacgcggagg 134465

                                                                   
Query: 466    cgccacccccggtacccgccgacgtggatctccttgcacgccagcccgaaggc 518
              |||||||| ||||  ||||||| ||||||||||||||| || || ||||||||
Sbjct: 134464 cgccacccgcggtggccgccgatgtggatctccttgcaggcgaggccgaaggc 134412
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>dbj|AP005248.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBa0084P08
          Length = 158656

 Score =  121 bits (61), Expect = 3e-24
 Identities = 100/113 (88%)
 Strand = Plus / Minus

                                                                         
Query: 406   agcacgtacaggagctgcgtgaaggcgaggatgatgacgaacgcctccagcaccctgagg 465
             |||||||| || ||||||||||||||||||||||||||||| ||||| ||||| | ||||
Sbjct: 22460 agcacgtagagcagctgcgtgaaggcgaggatgatgacgaaagcctcgagcacgcggagg 22401

                                                                  
Query: 466   cgccacccccggtacccgccgacgtggatctccttgcacgccagcccgaaggc 518
             |||||||| ||||  ||||||| ||||||||||||||| || || ||||||||
Sbjct: 22400 cgccacccgcggtggccgccgatgtggatctccttgcaggcgaggccgaaggc 22348
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>dbj|AK063592.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-118-B01, full
           insert sequence
          Length = 904

 Score =  121 bits (61), Expect = 3e-24
 Identities = 100/113 (88%)
 Strand = Plus / Minus

                                                                       
Query: 406 agcacgtacaggagctgcgtgaaggcgaggatgatgacgaacgcctccagcaccctgagg 465
           |||||||| || ||||||||||||||||||||||||||||| ||||| ||||| | ||||
Sbjct: 480 agcacgtagagcagctgcgtgaaggcgaggatgatgacgaaagcctcgagcacgcggagg 421

                                                                
Query: 466 cgccacccccggtacccgccgacgtggatctccttgcacgccagcccgaaggc 518
           |||||||| ||||  ||||||| ||||||||||||||| || || ||||||||
Sbjct: 420 cgccacccgcggtggccgccgatgtggatctccttgcaggcgaggccgaaggc 368
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>gb|U57639.1|OSU57639 Oryza sativa hydrophobic LEA-like protein mRNA, complete cds
          Length = 932

 Score =  121 bits (61), Expect = 3e-24
 Identities = 100/113 (88%)
 Strand = Plus / Minus

                                                                       
Query: 406 agcacgtacaggagctgcgtgaaggcgaggatgatgacgaacgcctccagcaccctgagg 465
           |||||||| || ||||||||||||||||||||||||||||| ||||| ||||| | ||||
Sbjct: 481 agcacgtagagcagctgcgtgaaggcgaggatgatgacgaaagcctcgagcacgcggagg 422

                                                                
Query: 466 cgccacccccggtacccgccgacgtggatctccttgcacgccagcccgaaggc 518
           |||||||| ||||  ||||||| ||||||||||||||| || || ||||||||
Sbjct: 421 cgccacccgcggtggccgccgatgtggatctccttgcaggcgaggccgaaggc 369
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>ref|NM_196907.1| Oryza sativa (japonica cultivar-group) unknown protein
           (OSJNBa0071K18.4), mRNA
          Length = 783

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                            
Query: 488 cgtggatctccttgcacgccagcccgaaggcca 520
           ||||||||||| ||||||||| |||||| ||||
Sbjct: 420 cgtggatctccctgcacgccaccccgaacgcca 388
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>ref|XM_675255.1| Plasmodium berghei strain ANKA DEAD/DEAH box helicase
           (PB000039.03.0) partial mRNA
          Length = 2481

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 426 gaaggcgaggatgatgacgaa 446
           |||||||||||||||||||||
Sbjct: 52  gaaggcgaggatgatgacgaa 72
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>gb|AC027038.12| Oryza sativa chromosome 10 BAC OSJNBa0071K18 genomic sequence, complete
             sequence
          Length = 149758

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                              
Query: 488   cgtggatctccttgcacgccagcccgaaggcca 520
             ||||||||||| ||||||||| |||||| ||||
Sbjct: 42122 cgtggatctccctgcacgccaccccgaacgcca 42090
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                                 
Query: 488      cgtggatctccttgcacgccagcccgaaggcca 520
                ||||||||||| ||||||||| |||||| ||||
Sbjct: 16618120 cgtggatctccctgcacgccaccccgaacgcca 16618152
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                                 
Query: 488      cgtggatctccttgcacgccagcccgaaggcca 520
                ||||||||||| ||||||||| |||||| ||||
Sbjct: 16626361 cgtggatctccctgcacgccaccccgaacgcca 16626393
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>gb|AC134045.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0022E16
              map C481S, complete sequence
          Length = 179668

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 137    gccatggatcgacgatgcat 156
              ||||||||||||||||||||
Sbjct: 144328 gccatggatcgacgatgcat 144347
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>gb|AC132492.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0605G01,
              complete sequence
          Length = 146303

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 492    gatctccttgcacgccagcc 511
              ||||||||||||||||||||
Sbjct: 141485 gatctccttgcacgccagcc 141466
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>gb|AC135418.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0035J16, complete sequence
          Length = 170233

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 492   gatctccttgcacgccagcc 511
             ||||||||||||||||||||
Sbjct: 40759 gatctccttgcacgccagcc 40740
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>gb|AY753660.1| Capsella bursa-pastoris LEAFY protein (LEAFY) gene, exons 1 through 3
            and partial cds
          Length = 2606

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 425  tgaaggcgaggatgatgacg 444
            ||||||||||||||||||||
Sbjct: 1102 tgaaggcgaggatgatgacg 1121
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>ref|XM_390706.1| Gibberella zeae PH-1 chromosome 1 hypothetical protein (FG10530.1)
            partial mRNA
          Length = 9642

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 482  cgccgacgtggatctccttg 501
            ||||||||||||||||||||
Sbjct: 7150 cgccgacgtggatctccttg 7131
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>gb|L78799.1|CCRFTSA Caulobacter vibrioides FtsA (ftsA) gene, complete cds
          Length = 2096

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 503  acgccagcccgaaggccaaggcgg 526
            |||||||||||| |||||||||||
Sbjct: 1886 acgccagcccgatggccaaggcgg 1909
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>gb|AC125093.4| Mus musculus BAC clone RP24-176F8 from chromosome 19, complete sequence
          Length = 158027

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 112    gctcacacacataccccact 131
              ||||||||||||||||||||
Sbjct: 113098 gctcacacacataccccact 113117
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>gb|AC124169.3| Mus musculus BAC clone RP23-151G15 from 19, complete sequence
          Length = 201188

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 112  gctcacacacataccccact 131
            ||||||||||||||||||||
Sbjct: 5740 gctcacacacataccccact 5759
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>ref|XM_970550.1| PREDICTED: Tribolium castaneum similar to CG32796-PB, isoform B
            (LOC664554), mRNA
          Length = 2484

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 294  gcccatgcccttgttgtggtggtc 317
            |||| |||||||||||||||||||
Sbjct: 1479 gcccttgcccttgttgtggtggtc 1456
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>gb|AE005922.1| Caulobacter crescentus CB15 section 248 of 359 of the complete genome
          Length = 10487

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 503  acgccagcccgaaggccaaggcgg 526
            |||||||||||| |||||||||||
Sbjct: 2039 acgccagcccgatggccaaggcgg 2016
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>gb|AC158313.7| Mus musculus chromosome 8, clone RP23-246H16, complete sequence
          Length = 168864

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 112   gctcacacacataccccact 131
             ||||||||||||||||||||
Sbjct: 64380 gctcacacacataccccact 64399
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 137      gccatggatcgacgatgcat 156
                ||||||||||||||||||||
Sbjct: 28185765 gccatggatcgacgatgcat 28185784
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 384      gaagagcccagagtggagag 403
                ||||||||||||||||||||
Sbjct: 29733895 gaagagcccagagtggagag 29733876
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>gb|AE004673.1| Pseudomonas aeruginosa PAO1, section 234 of 529 of the complete genome
          Length = 24397

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 311   ggtggtcaccgacgccggcgccgt 334
             |||||||||||||||||| |||||
Sbjct: 18564 ggtggtcaccgacgccggtgccgt 18541
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>dbj|AP004047.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OJ1191_G08
          Length = 172832

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 384    gaagagcccagagtggagag 403
              ||||||||||||||||||||
Sbjct: 102874 gaagagcccagagtggagag 102855
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>dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete genome
          Length = 3147090

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 308     tgtggtggtcaccgacgccggcgc 331
               |||||||||||||||| |||||||
Sbjct: 1929221 tgtggtggtcaccgactccggcgc 1929244
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>emb|AJ132503.1|MXA132503 Myxococcus xanthus taB, taC, taD, taE and taF genes
          Length = 4513

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 280  gcgacgccgccggtgcccat 299
            ||||||||||||||||||||
Sbjct: 3700 gcgacgccgccggtgcccat 3681
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>emb|AJ937741.1| Streptomyces ambofaciens ATCC 23877 right terminal inverted repeat
          Length = 243019

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 313    tggtcaccgacgccggcgcc 332
              ||||||||||||||||||||
Sbjct: 154337 tggtcaccgacgccggcgcc 154318
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>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence
          Length = 3716413

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 135   atgccatggatcgacgatgc 154
             ||||||||||||||||||||
Sbjct: 82121 atgccatggatcgacgatgc 82140
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>emb|AJ937740.1| Streptomyces ambofaciens ATCC 23877 left terminal inverted repeat
          Length = 273746

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 313    tggtcaccgacgccggcgcc 332
              ||||||||||||||||||||
Sbjct: 154337 tggtcaccgacgccggcgcc 154318
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 137      gccatggatcgacgatgcat 156
                ||||||||||||||||||||
Sbjct: 28170643 gccatggatcgacgatgcat 28170662


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,611,128
Number of Sequences: 3902068
Number of extensions: 3611128
Number of successful extensions: 70272
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 69919
Number of HSP's gapped (non-prelim): 352
length of query: 545
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 522
effective length of database: 17,143,297,704
effective search space: 8948801401488
effective search space used: 8948801401488
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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