>GI1L3_ARATH (Q940G6) Probable gibberellin receptor GID1L3 (EC 3.-.-.-)|
           (GID1-like protein 3)
          Length = 344

 Score = 68.6 bits (166), Expect = 1e-11
 Identities = 39/93 (41%), Positives = 53/93 (56%)
 Frame = -3

Query: 589 GYILLMPAFCSEQPTQSELDSTATAFLTRETCDRYCRLFLPAGANKDHPLMNPLGPDSPS 410
           G ILL P F   + T+SE       F+T    D Y R FLP G +++HP  +P GP S S
Sbjct: 211 GNILLNPMFGGTERTESEKRLDGKYFVTVRDRDWYWRAFLPEGEDREHPACSPFGPRSKS 270

Query: 409 LETMDAGRVLVVAAEGDLLRDKNVEYAERLRAA 311
           LE +   + LVV A  DL++D  ++YAE L+ A
Sbjct: 271 LEGLSFPKSLVVVAGLDLIQDWQLKYAEGLKKA 303

>GI1L1_ARATH (Q9MAA7) Probable gibberellin receptor GID1L1 (EC 3.-.-.-)|
           (GID1-like protein 1)
          Length = 345

 Score = 67.0 bits (162), Expect = 4e-11
 Identities = 38/93 (40%), Positives = 50/93 (53%)
 Frame = -3

Query: 589 GYILLMPAFCSEQPTQSELDSTATAFLTRETCDRYCRLFLPAGANKDHPLMNPLGPDSPS 410
           G ILL P F   + T+SE       F+T    D Y + FLP G +++HP  NP  P   S
Sbjct: 213 GNILLNPMFGGNERTESEKSLDGKYFVTVRDRDWYWKAFLPEGEDREHPACNPFSPRGKS 272

Query: 409 LETMDAGRVLVVAAEGDLLRDKNVEYAERLRAA 311
           LE +   + LVV A  DL+RD  + YAE L+ A
Sbjct: 273 LEGVSFPKSLVVVAGLDLIRDWQLAYAEGLKKA 305

>GI1L2_ARATH (Q9LYC1) Probable gibberellin receptor GID1L2 (EC 3.-.-.-)|
           (GID1-like protein 2)
          Length = 358

 Score = 66.2 bits (160), Expect = 7e-11
 Identities = 36/91 (39%), Positives = 52/91 (57%)
 Frame = -3

Query: 589 GYILLMPAFCSEQPTQSELDSTATAFLTRETCDRYCRLFLPAGANKDHPLMNPLGPDSPS 410
           G ILL P F  ++ TQSE       F+T +  D Y R +LP G ++DHP  NP GP   S
Sbjct: 213 GNILLHPMFGGQERTQSEKTLDGKYFVTIQDRDWYWRAYLPEGEDRDHPACNPFGPRGQS 272

Query: 409 LETMDAGRVLVVAAEGDLLRDKNVEYAERLR 317
           L+ ++  + LVV A  DL++D  + Y + L+
Sbjct: 273 LKGVNFPKSLVVVAGLDLVQDWQLAYVDGLK 303

>GID1_ORYSA (Q6L545) Gibberellin receptor GID1 (EC 3.-.-.-)|
           (Gibberellin-insensitive dwarf protein 1) (Protein
           GIBBERELLIN INSENSITIVE DWARF1)
          Length = 354

 Score = 57.8 bits (138), Expect = 2e-08
 Identities = 31/91 (34%), Positives = 48/91 (52%)
 Frame = -3

Query: 589 GYILLMPAFCSEQPTQSELDSTATAFLTRETCDRYCRLFLPAGANKDHPLMNPLGPDSPS 410
           G ILL   F   + T+SE       F+T +  D Y + +LP  A++DHP  NP GP+   
Sbjct: 220 GNILLNAMFGGTERTESERRLDGKYFVTLQDRDWYWKAYLPEDADRDHPACNPFGPNGRR 279

Query: 409 LETMDAGRVLVVAAEGDLLRDKNVEYAERLR 317
           L  +   + L++ +  DL  D+ + YA+ LR
Sbjct: 280 LGGLPFAKSLIIVSGLDLTCDRQLAYADALR 310

>LIP2_MORS1 (P24484) Lipase 2 (EC 3.1.1.3) (Triacylglycerol lipase)|
          Length = 433

 Score = 35.0 bits (79), Expect = 0.16
 Identities = 27/93 (29%), Positives = 41/93 (44%), Gaps = 1/93 (1%)
 Frame = -3

Query: 466 AGANKDHPLMNPLGPDSPSLETMDAGRVLVVAAEGDLLRDKNVEYAERLRAARGKENDDV 287
           +G  + HPL++ +  D+  L         +V AE D+LRD+ + YAE L+    KE   V
Sbjct: 331 SGLPQSHPLISVMHGDNTQLCPS-----YIVVAELDILRDEGLAYAELLQ----KEGVQV 381

Query: 286 ELVVFAGEEHAFFGVKPTSAATG-ELVRIIRRF 191
           +     G  H F  +       G +   II  F
Sbjct: 382 QTYTVLGAPHGFINLMSVHQGLGNQTTYIINEF 414

>AACC7_STRRY (P30180) Aminoglycoside N(3')-acetyltransferase VII (EC 2.3.1.81)|
           (ACC(3)-VII) (Aminocyclitol 3-N-acetyltransferase type
           VII)
          Length = 288

 Score = 32.7 bits (73), Expect = 0.81
 Identities = 24/68 (35%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
 Frame = -3

Query: 451 DHPLMNPLGPDSPSLETMD-AGRVLVVAAEGDLLRDKNVEYAERLRAARGKENDDVELVV 275
           DHP  +P GPDSP    +   GRVL++ A  + L    + +AE L  A GK   D E  +
Sbjct: 146 DHPWDDPHGPDSPLARLVAMGGRVLLLGAPLEAL--TLLHHAEALADAPGKRFVDYEQPI 203

Query: 274 FAGEEHAF 251
               E  +
Sbjct: 204 LVDGERVW 211

>HISX_LEIXX (Q6AE76) Histidinol dehydrogenase (EC 1.1.1.23) (HDH)|
          Length = 436

 Score = 32.3 bits (72), Expect = 1.1
 Identities = 32/89 (35%), Positives = 42/89 (47%), Gaps = 1/89 (1%)
 Frame = -3

Query: 541 SELDSTATAFLTRETCD-RYCRLFLPAGANKDHPLMNPLGPDSPSLETMDAGRVLVVAAE 365
           SE  +T    +  +T D RY    L + A  D    + L  DSP+      GRV   AAE
Sbjct: 235 SEAGTTEILVIADDTADPRYVAADLISQAEHDEAAASLLVTDSPAF----VGRV---AAE 287

Query: 364 GDLLRDKNVEYAERLRAARGKENDDVELV 278
            + L   +  YAER+RAA G +   V LV
Sbjct: 288 LETLA-ASTRYAERVRAALGGQQSAVVLV 315

>DHMH_METME (Q59542) Methylamine dehydrogenase heavy chain precursor (EC|
           1.4.99.3) (MADH)
          Length = 405

 Score = 32.0 bits (71), Expect = 1.4
 Identities = 33/116 (28%), Positives = 52/116 (44%), Gaps = 14/116 (12%)
 Frame = -3

Query: 583 ILLMPAFCSEQPTQSELDSTATAFLTRETCDRYCRLFLPAGANKDHPLMNPL-------- 428
           ++L  +      T ++L S  TA L  ET         PA  +K   +++P         
Sbjct: 27  LMLSSSLALADATPNQLGSEITAKLQDETSIAIA----PASDSKRVYVLDPGNFHMTSTV 82

Query: 427 ----GPDSPSLETMDAGRV--LVVAAEGDLLRDKNVEYAERLRAARGKENDDVELV 278
               G  S  L   DAG++  ++VA++G  L   N  Y+   R ARGK +D +EL+
Sbjct: 83  YTIDGKSSKLLGMTDAGKLPNVMVASDGKFLAIANTMYS---RVARGKRDDYLELI 135

>DCR1A_MOUSE (Q9JIC3) DNA cross-link repair 1A protein|
          Length = 1026

 Score = 31.6 bits (70), Expect = 1.8
 Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
 Frame = +2

Query: 71  IITSTIPLKKKKITSTLNSESSHARQPLGPP--VSAGCFRGHEP 196
           + TSTIP   KK T  L ++S  +++PLG P    AG F    P
Sbjct: 159 LCTSTIPSHYKKYTHILLAQSRDSKEPLGSPSDALAGLFAAAAP 202

>AACC8_STRFR (P29809) Aminoglycoside N(3')-acetyltransferase VIII (EC 2.3.1.81)|
           (ACC(3)-VIII) (Aminocyclitol 3-N-acetyltransferase type
           VIII)
          Length = 286

 Score = 31.2 bits (69), Expect = 2.4
 Identities = 22/51 (43%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
 Frame = -3

Query: 451 DHPLMNPLGPDSPSLETMDA-GRVLVVAAEGDLLRDKNVEYAERLRAARGK 302
           DHP  +P GPDSP      A GRVL++ A  D L    + +AE    A GK
Sbjct: 146 DHPWDDPHGPDSPLARLAGAGGRVLLLGAPLDTL--TLLHHAEARAEAPGK 194

>HIS1_RHOS4 (O08385) ATP phosphoribosyltransferase (EC 2.4.2.17) (ATP-PRTase)|
           (ATP-PRT)
          Length = 236

 Score = 30.8 bits (68), Expect = 3.1
 Identities = 23/91 (25%), Positives = 42/91 (46%), Gaps = 8/91 (8%)
 Frame = -3

Query: 583 ILLMPAFCSEQPTQSELDSTATAF-----LTRETCDRYCRL---FLPAGANKDHPLMNPL 428
           I+ +PAF  +  T  +LD+ A AF            +Y RL   FL A    D+ L++  
Sbjct: 101 IIAVPAFWIDVDTLDDLDAAAAAFRAAHGFRLRIATKYHRLVREFLMANGVADYQLVDSQ 160

Query: 427 GPDSPSLETMDAGRVLVVAAEGDLLRDKNVE 335
           G    +++   A  +  + + G+ LR  +++
Sbjct: 161 GATEGTVKNGTAEAIADITSSGETLRANHLK 191

>IDH_COREF (Q8RQL9) Isocitrate dehydrogenase [NADP] (EC 1.1.1.42)|
           (Oxalosuccinate decarboxylase) (IDH)
          Length = 729

 Score = 30.8 bits (68), Expect = 3.1
 Identities = 23/75 (30%), Positives = 38/75 (50%), Gaps = 6/75 (8%)
 Frame = -3

Query: 391 GRVLVVAAEGDLLRDKNVEYAERLRAARGKE---NDDVELVVFAGE---EHAFFGVKPTS 230
           G+V VVA+ GD+L + +VE  +  RA + K+    D V+L V         A F + P  
Sbjct: 420 GKVQVVASNGDVLIEHDVEKGDIWRACQTKDAPIQDWVKLAVNRARLSGMPAVFWLDPAR 479

Query: 229 AATGELVRIIRRFMA 185
           A    L  ++ +++A
Sbjct: 480 AHDRNLTTLVEKYLA 494

>T2FB_DROME (P41900) Transcription initiation factor IIF beta subunit (EC|
           3.6.1.-) (ATP-dependent helicase TfIIF-beta)
           (TFIIF-beta)
          Length = 277

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 14/56 (25%), Positives = 29/56 (51%), Gaps = 4/56 (7%)
 Frame = -3

Query: 343 NVEYAERLRAARGKENDD----VELVVFAGEEHAFFGVKPTSAATGELVRIIRRFM 188
           N+EY ER +A   K  DD    ++++  A E+H ++ +K     T + +  ++  +
Sbjct: 179 NIEYRERKKAEGKKARDDKNAVMDMLFHAFEKHQYYNIKDLVKITNQPISYLKEIL 234

>APGM_DEIRA (Q9RSA0) Probable 2,3-bisphosphoglycerate-independent|
           phosphoglycerate mutase (EC 5.4.2.1)
           (Phosphoglyceromutase) (BPG-independent PGAM) (aPGAM)
          Length = 410

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 19/51 (37%), Positives = 27/51 (52%)
 Frame = -3

Query: 403 TMDAGRVLVVAAEGDLLRDKNVEYAERLRAARGKENDDVELVVFAGEEHAF 251
           T+ AGR+++    G    +KN E   +LRAA   E D V + V+   EH F
Sbjct: 115 TLGAGRLILDRRAGRPSDEKNAEIVAKLRAAI-PEIDGVAVEVYTESEHRF 164

>CEZ2_MOUSE (Q8R554) Zinc finger A20 domain-containing protein ? (EC 3.-.-.-)|
           (Zinc finger protein Cezanne 2) (OTU domain-containing
           protein 7)
          Length = 926

 Score = 29.6 bits (65), Expect = 6.9
 Identities = 17/39 (43%), Positives = 20/39 (51%)
 Frame = +1

Query: 409 GLGCPARAGSSAGGPCSLRRAGRGGSTCRRFP*SGTPSP 525
           G G  ARA  +AGG  S    G GG   R  P +G P+P
Sbjct: 733 GTGASARAARAAGGAAS---PGPGGGARRAAPGTGGPTP 768

>LIP5_YEAST (P32875) Lipoic acid synthetase, mitochondrial precursor (Lip-syn)|
           (Lipoate synthase)
          Length = 414

 Score = 29.3 bits (64), Expect = 9.0
 Identities = 22/79 (27%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
 Frame = -3

Query: 529 STATAFLTRETCDRYCRLFLPAGANKDHPLMNPLGPD--SPSLETMDAGRVLVVAAEGDL 356
           +TAT  L  +TC R CR F     N+     +P+ P+  + +++    G V++   + D 
Sbjct: 170 ATATIMLLGDTCTRGCR-FCSVKTNRTPSKPDPMEPENTAEAIKRWGLGYVVLTTVDRDD 228

Query: 355 LRDKNVEY-AERLRAARGK 302
           L D    + AE +R  + K
Sbjct: 229 LVDGGANHLAETVRKIKQK 247

>AROH_ENTAG (O54459) Phospho-2-dehydro-3-deoxyheptonate aldolase, Trp-sensitive|
           (EC 2.5.1.54) (Phospho-2-keto-3-deoxyheptonate aldolase)
           (DAHP synthetase) (3-deoxy-D-arabino-heptulosonate
           7-phosphate synthase)
          Length = 348

 Score = 29.3 bits (64), Expect = 9.0
 Identities = 28/109 (25%), Positives = 41/109 (37%), Gaps = 2/109 (1%)
 Frame = -3

Query: 589 GYILLMPAFCSEQPTQSELDSTATAFLTRETCDRYCRLFLPAGANKDHPLMNPLGPDSPS 410
           G ++  P+  +E P    +    TA   R  C             +DH L+  +GP S  
Sbjct: 13  GSLITPPSLAAEHPVSPAIADNVTAARKRIACIL---------TGEDHRLLVVIGPCS-- 61

Query: 409 LETMDAGRVLVVAAEGDLLRDKN--VEYAERLRAARGKENDDVELVVFA 269
                             L D    +EYAERL A R +  D +E+V+ A
Sbjct: 62  ------------------LHDPKAALEYAERLNALRRRYEDRLEIVMRA 92

>HGV2_HALRO (Q02508) Protein HGV2|
          Length = 510

 Score = 29.3 bits (64), Expect = 9.0
 Identities = 16/64 (25%), Positives = 33/64 (51%)
 Frame = +2

Query: 29  DKGAHRKCRRHDAEIITSTIPLKKKKITSTLNSESSHARQPLGPPVSAGCFRGHEPPDDP 208
           +K   ++     A++ +ST+   K + +S    ESS+  +P     SA   + +E  +DP
Sbjct: 167 EKSDEKEKEEKQAKVESSTVKDVKDEKSSDKPVESSNTEEPGTSGTSASSSKENESEEDP 226

Query: 209 DELA 220
           D+++
Sbjct: 227 DDIS 230

>DAPA_HALSA (Q9HS19) Dihydrodipicolinate synthase (EC 4.2.1.52) (DHDPS)|
          Length = 304

 Score = 29.3 bits (64), Expect = 9.0
 Identities = 23/86 (26%), Positives = 33/86 (38%), Gaps = 2/86 (2%)
 Frame = -3

Query: 577 LMPAFCSEQPTQSELDSTATAFLTRETCDRYCRLFLPAGANKDHPLMNPLGPDSPSLETM 398
           ++P   +       LD+  TA   R   D       P G N + PL+ P   D      +
Sbjct: 19  VVPPVVTAFDADESLDADTTADHARMVVDAGVHGVFPLGTNGEFPLLTPSERDRVVTAVV 78

Query: 397 D--AGRVLVVAAEGDLLRDKNVEYAE 326
           D   G V V+A  G     + V +AE
Sbjct: 79  DEVGGEVPVIAGVGAPSTRQTVAHAE 104

>SEM5A_MOUSE (Q62217) Semaphorin-5A precursor (Semaphorin F) (Sema F)|
          Length = 1077

 Score = 29.3 bits (64), Expect = 9.0
 Identities = 15/38 (39%), Positives = 20/38 (52%)
 Frame = +2

Query: 284 LDVIVLLAPRRPQPLRVLHVLVPQQVALRGHDEHAAGV 397
           L+ I L   RR +P+R L +L  Q V   G  EH A +
Sbjct: 445 LEEIELFPERRSEPIRSLQILHSQSVLFVGLQEHVAKI 482


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 75,387,216
Number of Sequences: 219361
Number of extensions: 1503050
Number of successful extensions: 5505
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 5210
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5499
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5196311029
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)