Clone Information

BLAST Search Result

Clone Name	rbaal17g03
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	ref\|NM_186421.2\| Oryza sativa (japonica cultivar-group), mRNA	127	4e-26
2	ref\|XM_507352.1\| PREDICTED Oryza sativa (japonica cultivar-group...	127	4e-26
3	ref\|XM_506173.2\| PREDICTED Oryza sativa (japonica cultivar-group...	127	4e-26
4	dbj\|AP008213.1\| Oryza sativa (japonica cultivar-group) genomic D...	127	4e-26
5	dbj\|AP004664.5\| Oryza sativa (japonica cultivar-group) genomic D...	127	4e-26
6	dbj\|AK106142.1\| Oryza sativa (japonica cultivar-group) cDNA clon...	127	4e-26
7	dbj\|AK106008.1\| Oryza sativa (japonica cultivar-group) cDNA clon...	127	4e-26
8	dbj\|AK061530.1\| Oryza sativa (japonica cultivar-group) cDNA clon...	127	4e-26
9	dbj\|AP003847.3\| Oryza sativa (japonica cultivar-group) genomic D...	127	4e-26
10	ref\|NM_018249.4\| Homo sapiens CDK5 regulatory subunit associated...	44	0.52
11	ref\|NM_001011649.1\| Homo sapiens CDK5 regulatory subunit associa...	44	0.52
12	emb\|AL353736.11\| Human DNA sequence from clone RP11-412P1 on chr...	44	0.52
13	gb\|AF448860.1\| Homo sapiens hypothetical protein mRNA, complete cds	44	0.52
14	dbj\|AK122913.1\| Homo sapiens cDNA FLJ16590 fis, clone TESTI4001604	44	0.52
15	tpg\|BK005504.1\| TPA: TPA_exp: Homo sapiens centrosome protein Ce...	44	0.52
16	dbj\|AB029320.1\| Haloarcula japonica gene for cruxrhodopsin, comp...	44	0.52
17	dbj\|AB046853.2\| Homo sapiens mRNA for KIAA1633 protein, partial cds	44	0.52
18	emb\|BX640896.1\|HSM807030 Homo sapiens mRNA; cDNA DKFZp686E2242 (...	44	0.52
19	emb\|BX537421.1\|HSM805723 Homo sapiens mRNA; cDNA DKFZp686E2146 (...	44	0.52
20	emb\|AL833481.1\|HSM804794 Homo sapiens mRNA; cDNA DKFZp686D0129 (...	44	0.52
21	emb\|BX537759.1\|HSM805844 Homo sapiens mRNA; cDNA DKFZp686O0188 (...	44	0.52
22	emb\|AL133161.1\|HSM801327 Homo sapiens mRNA; cDNA DKFZp434K0115 (...	44	0.52
23	ref\|NM_184424.2\| Oryza sativa (japonica cultivar-group), mRNA	42	2.1
24	ref\|NM_186419.2\| Oryza sativa (japonica cultivar-group), mRNA	42	2.1
25	gb\|AF537126.1\| Cochliobolus carbonum putative HOS3-like histone ...	42	2.1
26	emb\|CR555306.1\| Azoarcus sp. EbN1 complete genome	42	2.1
27	dbj\|AP008207.1\| Oryza sativa (japonica cultivar-group) genomic D...	42	2.1
28	dbj\|AP003225.3\| Oryza sativa (japonica cultivar-group) genomic D...	42	2.1
29	dbj\|AP003045.2\| Oryza sativa (japonica cultivar-group) genomic D...	42	2.1
30	dbj\|AK073659.1\| Oryza sativa (japonica cultivar-group) cDNA clon...	42	2.1
31	dbj\|AK060305.1\| Oryza sativa (japonica cultivar-group) cDNA clon...	42	2.1
32	dbj\|AK060082.1\| Oryza sativa (japonica cultivar-group) cDNA clon...	42	2.1
33	gb\|DQ213981.1\| Taeniopygia guttata clone 0061P0017D01 adenylate ...	40	8.1
34	gb\|DQ213980.1\| Taeniopygia guttata clone 0061P0011H08 adenylate ...	40	8.1
35	gb\|CP000125.1\| Burkholderia pseudomallei 1710b chromosome II, co...	40	8.1
36	emb\|CR391941.10\| Zebrafish DNA sequence from clone DKEY-25O19 in...	40	8.1
37	emb\|CR388381.12\| Zebrafish DNA sequence from clone CH211-222P22 ...	40	8.1
38	gb\|AY305378.1\| Ralstonia eutropha H16 megaplasmid pHG1, complete...	40	8.1
39	emb\|BX571966.1\| Burkholderia pseudomallei strain K96243, chromos...	40	8.1
40	gb\|CP000011.2\| Burkholderia mallei ATCC 23344 chromosome 2, comp...	40	8.1
41	dbj\|AP008214.1\| Oryza sativa (japonica cultivar-group) genomic D...	40	8.1
42	gb\|AF322013.1\|AF322012S2 Bradyrhizobium japonicum symbiotic gene...	40	8.1
43	gb\|AF322012.1\|AF322012S1 Bradyrhizobium japonicum symbiotic gene...	40	8.1
44	dbj\|AP004137.3\| Oryza sativa (japonica cultivar-group) genomic D...	40	8.1
45	dbj\|AP003947.3\| Oryza sativa (japonica cultivar-group) genomic D...	40	8.1
46	dbj\|BA000040.2\| Bradyrhizobium japonicum USDA 110 DNA, complete ...	40	8.1
47	gb\|CP000086.1\| Burkholderia thailandensis E264 chromosome I, com...	40	8.1
48	dbj\|AP006840.1\| Symbiobacterium thermophilum IAM 14863 DNA, comp...	40	8.1

>ref|NM_186421.2| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1199

 Score =  127 bits (64), Expect = 4e-26
 Identities = 94/104 (90%)
 Strand = Plus / Minus

                                                                        
Query: 189  atgaaccgcctgatgatccggacgagctcgccggtggccgctgacgtgggcttcaccccg 248
            |||||||||||||||| |  ||||||||||||||||||||| ||| | |||||||| |||
Sbjct: 1034 atgaaccgcctgatgacctcgacgagctcgccggtggccgccgacattggcttcacgccg 975

                                                        
Query: 249  aagaacgcgtgctcctcgccggcgaacacgacgagctcgacgtc 292
            ||||||||||||||||||||||||||||| || ||||| |||||
Sbjct: 974  aagaacgcgtgctcctcgccggcgaacaccaccagctccacgtc 931



 Score =  127 bits (64), Expect = 4e-26
 Identities = 223/276 (80%)
 Strand = Plus / Minus

                                                                       
Query: 314 cgccctcagccgctccgcgtactccacgttcttgtccctcagcaggtcgccctccgcggc 373
           |||| ||| ||||||||||||||| |||||||||||||| || |||||||| || |||||
Sbjct: 921 cgccttcatccgctccgcgtactcgacgttcttgtccctgaggaggtcgccgtcggcggc 862

                                                                       
Query: 374 cacgacgagcacgcggccggcgtccatcgtctcaaggcttgggctgtccggcccgagcgg 433
            || || |||||||||||| |||||| || ||| |||||  ||||  ||||||||| |||
Sbjct: 861 gaccaccagcacgcggccgacgtccaccgcctccaggctccggctcgccggcccgaacgg 802

                                                                       
Query: 434 gttcatcagcgggtggtccttgttcgctccggcgggcaggaagaggcggcagtacctgtc 493
           ||| |  ||||||||||||||||  || |||||||||||   |||||||||||| | |||
Sbjct: 801 gttgacgagcgggtggtccttgtcggcgccggcgggcagcgcgaggcggcagtagcggtc 742

                                                                       
Query: 494 gcaggtttccctagtcaggaacgccgtcgccgttgagtcaagctcggactgcgtcggctg 553
           |||  | || |  ||||||||||| || ||||  |   | ||||| ||| ||||||||  
Sbjct: 741 gcacatgtcgcgcgtcaggaacgcggtggccggcgccgccagctccgacggcgtcggcct 682

                                               
Query: 554 ctccgagcagaatgccggcatgagcaggatgtaccc 589
           |||||||  ||| ||||||||||| |||| ||||||
Sbjct: 681 ctccgagatgaacgccggcatgaggaggacgtaccc 646

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>ref|XM_507352.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1714_H10.152 mRNA
          Length = 1375

 Score =  127 bits (64), Expect = 4e-26
 Identities = 94/104 (90%)
 Strand = Plus / Minus

                                                                        
Query: 189  atgaaccgcctgatgatccggacgagctcgccggtggccgctgacgtgggcttcaccccg 248
            |||||||||||||||| |  ||||||||||||||||||||| ||| | |||||||| |||
Sbjct: 1043 atgaaccgcctgatgacctcgacgagctcgccggtggccgccgacattggcttcacgccg 984

                                                        
Query: 249  aagaacgcgtgctcctcgccggcgaacacgacgagctcgacgtc 292
            ||||||||||||||||||||||||||||| || ||||| |||||
Sbjct: 983  aagaacgcgtgctcctcgccggcgaacaccaccagctccacgtc 940



 Score =  127 bits (64), Expect = 4e-26
 Identities = 223/276 (80%)
 Strand = Plus / Minus

                                                                       
Query: 314 cgccctcagccgctccgcgtactccacgttcttgtccctcagcaggtcgccctccgcggc 373
           |||| ||| ||||||||||||||| |||||||||||||| || |||||||| || |||||
Sbjct: 930 cgccttcatccgctccgcgtactcgacgttcttgtccctgaggaggtcgccgtcggcggc 871

                                                                       
Query: 374 cacgacgagcacgcggccggcgtccatcgtctcaaggcttgggctgtccggcccgagcgg 433
            || || |||||||||||| |||||| || ||| |||||  ||||  ||||||||| |||
Sbjct: 870 gaccaccagcacgcggccgacgtccaccgcctccaggctccggctcgccggcccgaacgg 811

                                                                       
Query: 434 gttcatcagcgggtggtccttgttcgctccggcgggcaggaagaggcggcagtacctgtc 493
           ||| |  ||||||||||||||||  || |||||||||||   |||||||||||| | |||
Sbjct: 810 gttgacgagcgggtggtccttgtcggcgccggcgggcagcgcgaggcggcagtagcggtc 751

                                                                       
Query: 494 gcaggtttccctagtcaggaacgccgtcgccgttgagtcaagctcggactgcgtcggctg 553
           |||  | || |  ||||||||||| || ||||  |   | ||||| ||| ||||||||  
Sbjct: 750 gcacatgtcgcgcgtcaggaacgcggtggccggcgccgccagctccgacggcgtcggcct 691

                                               
Query: 554 ctccgagcagaatgccggcatgagcaggatgtaccc 589
           |||||||  ||| ||||||||||| |||| ||||||
Sbjct: 690 ctccgagatgaacgccggcatgaggaggacgtaccc 655

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>ref|XM_506173.2| PREDICTED Oryza sativa (japonica cultivar-group), OJ1714_H10.152 mRNA
          Length = 1378

 Score =  127 bits (64), Expect = 4e-26
 Identities = 94/104 (90%)
 Strand = Plus / Minus

                                                                        
Query: 189  atgaaccgcctgatgatccggacgagctcgccggtggccgctgacgtgggcttcaccccg 248
            |||||||||||||||| |  ||||||||||||||||||||| ||| | |||||||| |||
Sbjct: 1043 atgaaccgcctgatgacctcgacgagctcgccggtggccgccgacattggcttcacgccg 984

                                                        
Query: 249  aagaacgcgtgctcctcgccggcgaacacgacgagctcgacgtc 292
            ||||||||||||||||||||||||||||| || ||||| |||||
Sbjct: 983  aagaacgcgtgctcctcgccggcgaacaccaccagctccacgtc 940



 Score =  127 bits (64), Expect = 4e-26
 Identities = 223/276 (80%)
 Strand = Plus / Minus

                                                                       
Query: 314 cgccctcagccgctccgcgtactccacgttcttgtccctcagcaggtcgccctccgcggc 373
           |||| ||| ||||||||||||||| |||||||||||||| || |||||||| || |||||
Sbjct: 930 cgccttcatccgctccgcgtactcgacgttcttgtccctgaggaggtcgccgtcggcggc 871

                                                                       
Query: 374 cacgacgagcacgcggccggcgtccatcgtctcaaggcttgggctgtccggcccgagcgg 433
            || || |||||||||||| |||||| || ||| |||||  ||||  ||||||||| |||
Sbjct: 870 gaccaccagcacgcggccgacgtccaccgcctccaggctccggctcgccggcccgaacgg 811

                                                                       
Query: 434 gttcatcagcgggtggtccttgttcgctccggcgggcaggaagaggcggcagtacctgtc 493
           ||| |  ||||||||||||||||  || |||||||||||   |||||||||||| | |||
Sbjct: 810 gttgacgagcgggtggtccttgtcggcgccggcgggcagcgcgaggcggcagtagcggtc 751

                                                                       
Query: 494 gcaggtttccctagtcaggaacgccgtcgccgttgagtcaagctcggactgcgtcggctg 553
           |||  | || |  ||||||||||| || ||||  |   | ||||| ||| ||||||||  
Sbjct: 750 gcacatgtcgcgcgtcaggaacgcggtggccggcgccgccagctccgacggcgtcggcct 691

                                               
Query: 554 ctccgagcagaatgccggcatgagcaggatgtaccc 589
           |||||||  ||| ||||||||||| |||| ||||||
Sbjct: 690 ctccgagatgaacgccggcatgaggaggacgtaccc 655

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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score =  127 bits (64), Expect = 4e-26
 Identities = 223/276 (80%)
 Strand = Plus / Plus

                                                                           
Query: 314     cgccctcagccgctccgcgtactccacgttcttgtccctcagcaggtcgccctccgcggc 373
               |||| ||| ||||||||||||||| |||||||||||||| || |||||||| || |||||
Sbjct: 3374819 cgccttcatccgctccgcgtactcgacgttcttgtccctgaggaggtcgccgtcggcggc 3374878

                                                                           
Query: 374     cacgacgagcacgcggccggcgtccatcgtctcaaggcttgggctgtccggcccgagcgg 433
                || || |||||||||||| |||||| || ||| |||||  ||||  ||||||||| |||
Sbjct: 3374879 gaccaccagcacgcggccgacgtccaccgcctccaggctccggctcgccggcccgaacgg 3374938

                                                                           
Query: 434     gttcatcagcgggtggtccttgttcgctccggcgggcaggaagaggcggcagtacctgtc 493
               ||| |  ||||||||||||||||  || |||||||||||   |||||||||||| | |||
Sbjct: 3374939 gttgacgagcgggtggtccttgtcggcgccggcgggcagcgcgaggcggcagtagcggtc 3374998

                                                                           
Query: 494     gcaggtttccctagtcaggaacgccgtcgccgttgagtcaagctcggactgcgtcggctg 553
               |||  | || |  ||||||||||| || ||||  |   | ||||| ||| ||||||||  
Sbjct: 3374999 gcacatgtcgcgcgtcaggaacgcggtggccggcgccgccagctccgacggcgtcggcct 3375058

                                                   
Query: 554     ctccgagcagaatgccggcatgagcaggatgtaccc 589
               |||||||  ||| ||||||||||| |||| ||||||
Sbjct: 3375059 ctccgagatgaacgccggcatgaggaggacgtaccc 3375094



 Score =  127 bits (64), Expect = 4e-26
 Identities = 94/104 (90%)
 Strand = Plus / Plus

                                                                           
Query: 189     atgaaccgcctgatgatccggacgagctcgccggtggccgctgacgtgggcttcaccccg 248
               |||||||||||||||| |  ||||||||||||||||||||| ||| | |||||||| |||
Sbjct: 3374706 atgaaccgcctgatgacctcgacgagctcgccggtggccgccgacattggcttcacgccg 3374765

                                                           
Query: 249     aagaacgcgtgctcctcgccggcgaacacgacgagctcgacgtc 292
               ||||||||||||||||||||||||||||| || ||||| |||||
Sbjct: 3374766 aagaacgcgtgctcctcgccggcgaacaccaccagctccacgtc 3374809



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                        
Query: 242     caccccgaagaacgcgtgctcctcgccggcgaacacgacga 282
               |||| |||||||  |||||| ||||||||||||| ||||||
Sbjct: 3365322 cacctcgaagaagccgtgctgctcgccggcgaactcgacga 3365362

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>dbj|AP004664.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0428D12
          Length = 141678

 Score =  127 bits (64), Expect = 4e-26
 Identities = 223/276 (80%)
 Strand = Plus / Plus

                                                                         
Query: 314   cgccctcagccgctccgcgtactccacgttcttgtccctcagcaggtcgccctccgcggc 373
             |||| ||| ||||||||||||||| |||||||||||||| || |||||||| || |||||
Sbjct: 14639 cgccttcatccgctccgcgtactcgacgttcttgtccctgaggaggtcgccgtcggcggc 14698

                                                                         
Query: 374   cacgacgagcacgcggccggcgtccatcgtctcaaggcttgggctgtccggcccgagcgg 433
              || || |||||||||||| |||||| || ||| |||||  ||||  ||||||||| |||
Sbjct: 14699 gaccaccagcacgcggccgacgtccaccgcctccaggctccggctcgccggcccgaacgg 14758

                                                                         
Query: 434   gttcatcagcgggtggtccttgttcgctccggcgggcaggaagaggcggcagtacctgtc 493
             ||| |  ||||||||||||||||  || |||||||||||   |||||||||||| | |||
Sbjct: 14759 gttgacgagcgggtggtccttgtcggcgccggcgggcagcgcgaggcggcagtagcggtc 14818

                                                                         
Query: 494   gcaggtttccctagtcaggaacgccgtcgccgttgagtcaagctcggactgcgtcggctg 553
             |||  | || |  ||||||||||| || ||||  |   | ||||| ||| ||||||||  
Sbjct: 14819 gcacatgtcgcgcgtcaggaacgcggtggccggcgccgccagctccgacggcgtcggcct 14878

                                                 
Query: 554   ctccgagcagaatgccggcatgagcaggatgtaccc 589
             |||||||  ||| ||||||||||| |||| ||||||
Sbjct: 14879 ctccgagatgaacgccggcatgaggaggacgtaccc 14914



 Score =  127 bits (64), Expect = 4e-26
 Identities = 94/104 (90%)
 Strand = Plus / Plus

                                                                         
Query: 189   atgaaccgcctgatgatccggacgagctcgccggtggccgctgacgtgggcttcaccccg 248
             |||||||||||||||| |  ||||||||||||||||||||| ||| | |||||||| |||
Sbjct: 14526 atgaaccgcctgatgacctcgacgagctcgccggtggccgccgacattggcttcacgccg 14585

                                                         
Query: 249   aagaacgcgtgctcctcgccggcgaacacgacgagctcgacgtc 292
             ||||||||||||||||||||||||||||| || ||||| |||||
Sbjct: 14586 aagaacgcgtgctcctcgccggcgaacaccaccagctccacgtc 14629



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                     
Query: 242  caccccgaagaacgcgtgctcctcgccggcgaacacgacga 282
            |||| |||||||  |||||| ||||||||||||| ||||||
Sbjct: 5142 cacctcgaagaagccgtgctgctcgccggcgaactcgacga 5182

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>dbj|AK106142.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-207-G10, full
            insert sequence
          Length = 1199

 Score =  127 bits (64), Expect = 4e-26
 Identities = 94/104 (90%)
 Strand = Plus / Minus

                                                                        
Query: 189  atgaaccgcctgatgatccggacgagctcgccggtggccgctgacgtgggcttcaccccg 248
            |||||||||||||||| |  ||||||||||||||||||||| ||| | |||||||| |||
Sbjct: 1034 atgaaccgcctgatgacctcgacgagctcgccggtggccgccgacattggcttcacgccg 975

                                                        
Query: 249  aagaacgcgtgctcctcgccggcgaacacgacgagctcgacgtc 292
            ||||||||||||||||||||||||||||| || ||||| |||||
Sbjct: 974  aagaacgcgtgctcctcgccggcgaacaccaccagctccacgtc 931



 Score =  127 bits (64), Expect = 4e-26
 Identities = 223/276 (80%)
 Strand = Plus / Minus

                                                                       
Query: 314 cgccctcagccgctccgcgtactccacgttcttgtccctcagcaggtcgccctccgcggc 373
           |||| ||| ||||||||||||||| |||||||||||||| || |||||||| || |||||
Sbjct: 921 cgccttcatccgctccgcgtactcgacgttcttgtccctgaggaggtcgccgtcggcggc 862

                                                                       
Query: 374 cacgacgagcacgcggccggcgtccatcgtctcaaggcttgggctgtccggcccgagcgg 433
            || || |||||||||||| |||||| || ||| |||||  ||||  ||||||||| |||
Sbjct: 861 gaccaccagcacgcggccgacgtccaccgcctccaggctccggctcgccggcccgaacgg 802

                                                                       
Query: 434 gttcatcagcgggtggtccttgttcgctccggcgggcaggaagaggcggcagtacctgtc 493
           ||| |  ||||||||||||||||  || |||||||||||   |||||||||||| | |||
Sbjct: 801 gttgacgagcgggtggtccttgtcggcgccggcgggcagcgcgaggcggcagtagcggtc 742

                                                                       
Query: 494 gcaggtttccctagtcaggaacgccgtcgccgttgagtcaagctcggactgcgtcggctg 553
           |||  | || |  ||||||||||| || ||||  |   | ||||| ||| ||||||||  
Sbjct: 741 gcacatgtcgcgcgtcaggaacgcggtggccggcgccgccagctccgacggcgtcggcct 682

                                               
Query: 554 ctccgagcagaatgccggcatgagcaggatgtaccc 589
           |||||||  ||| ||||||||||| |||| ||||||
Sbjct: 681 ctccgagatgaacgccggcatgaggaggacgtaccc 646

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>dbj|AK106008.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-206-A09, full
            insert sequence
          Length = 1375

 Score =  127 bits (64), Expect = 4e-26
 Identities = 94/104 (90%)
 Strand = Plus / Minus

                                                                        
Query: 189  atgaaccgcctgatgatccggacgagctcgccggtggccgctgacgtgggcttcaccccg 248
            |||||||||||||||| |  ||||||||||||||||||||| ||| | |||||||| |||
Sbjct: 1043 atgaaccgcctgatgacctcgacgagctcgccggtggccgccgacattggcttcacgccg 984

                                                        
Query: 249  aagaacgcgtgctcctcgccggcgaacacgacgagctcgacgtc 292
            ||||||||||||||||||||||||||||| || ||||| |||||
Sbjct: 983  aagaacgcgtgctcctcgccggcgaacaccaccagctccacgtc 940



 Score =  127 bits (64), Expect = 4e-26
 Identities = 223/276 (80%)
 Strand = Plus / Minus

                                                                       
Query: 314 cgccctcagccgctccgcgtactccacgttcttgtccctcagcaggtcgccctccgcggc 373
           |||| ||| ||||||||||||||| |||||||||||||| || |||||||| || |||||
Sbjct: 930 cgccttcatccgctccgcgtactcgacgttcttgtccctgaggaggtcgccgtcggcggc 871

                                                                       
Query: 374 cacgacgagcacgcggccggcgtccatcgtctcaaggcttgggctgtccggcccgagcgg 433
            || || |||||||||||| |||||| || ||| |||||  ||||  ||||||||| |||
Sbjct: 870 gaccaccagcacgcggccgacgtccaccgcctccaggctccggctcgccggcccgaacgg 811

                                                                       
Query: 434 gttcatcagcgggtggtccttgttcgctccggcgggcaggaagaggcggcagtacctgtc 493
           ||| |  ||||||||||||||||  || |||||||||||   |||||||||||| | |||
Sbjct: 810 gttgacgagcgggtggtccttgtcggcgccggcgggcagcgcgaggcggcagtagcggtc 751

                                                                       
Query: 494 gcaggtttccctagtcaggaacgccgtcgccgttgagtcaagctcggactgcgtcggctg 553
           |||  | || |  ||||||||||| || ||||  |   | ||||| ||| ||||||||  
Sbjct: 750 gcacatgtcgcgcgtcaggaacgcggtggccggcgccgccagctccgacggcgtcggcct 691

                                               
Query: 554 ctccgagcagaatgccggcatgagcaggatgtaccc 589
           |||||||  ||| ||||||||||| |||| ||||||
Sbjct: 690 ctccgagatgaacgccggcatgaggaggacgtaccc 655

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>dbj|AK061530.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-310-E02, full
            insert sequence
          Length = 1377

 Score =  127 bits (64), Expect = 4e-26
 Identities = 94/104 (90%)
 Strand = Plus / Minus

                                                                        
Query: 189  atgaaccgcctgatgatccggacgagctcgccggtggccgctgacgtgggcttcaccccg 248
            |||||||||||||||| |  ||||||||||||||||||||| ||| | |||||||| |||
Sbjct: 1043 atgaaccgcctgatgacctcgacgagctcgccggtggccgccgacattggcttcacgccg 984

                                                        
Query: 249  aagaacgcgtgctcctcgccggcgaacacgacgagctcgacgtc 292
            ||||||||||||||||||||||||||||| || ||||| |||||
Sbjct: 983  aagaacgcgtgctcctcgccggcgaacaccaccagctccacgtc 940



 Score =  127 bits (64), Expect = 4e-26
 Identities = 223/276 (80%)
 Strand = Plus / Minus

                                                                       
Query: 314 cgccctcagccgctccgcgtactccacgttcttgtccctcagcaggtcgccctccgcggc 373
           |||| ||| ||||||||||||||| |||||||||||||| || |||||||| || |||||
Sbjct: 930 cgccttcatccgctccgcgtactcgacgttcttgtccctgaggaggtcgccgtcggcggc 871

                                                                       
Query: 374 cacgacgagcacgcggccggcgtccatcgtctcaaggcttgggctgtccggcccgagcgg 433
            || || |||||||||||| |||||| || ||| |||||  ||||  ||||||||| |||
Sbjct: 870 gaccaccagcacgcggccgacgtccaccgcctccaggctccggctcgccggcccgaacgg 811

                                                                       
Query: 434 gttcatcagcgggtggtccttgttcgctccggcgggcaggaagaggcggcagtacctgtc 493
           ||| |  ||||||||||||||||  || |||||||||||   |||||||||||| | |||
Sbjct: 810 gttgacgagcgggtggtccttgtcggcgccggcgggcagcgcgaggcggcagtagcggtc 751

                                                                       
Query: 494 gcaggtttccctagtcaggaacgccgtcgccgttgagtcaagctcggactgcgtcggctg 553
           |||  | || |  ||||||||||| || ||||  |   | ||||| ||| ||||||||  
Sbjct: 750 gcacatgtcgcgcgtcaggaacgcggtggccggcgccgccagctccgacggcgtcggcct 691

                                               
Query: 554 ctccgagcagaatgccggcatgagcaggatgtaccc 589
           |||||||  ||| ||||||||||| |||| ||||||
Sbjct: 690 ctccgagatgaacgccggcatgaggaggacgtaccc 655

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>dbj|AP003847.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:OJ1714_H10
          Length = 191580

 Score =  127 bits (64), Expect = 4e-26
 Identities = 223/276 (80%)
 Strand = Plus / Plus

                                                                          
Query: 314    cgccctcagccgctccgcgtactccacgttcttgtccctcagcaggtcgccctccgcggc 373
              |||| ||| ||||||||||||||| |||||||||||||| || |||||||| || |||||
Sbjct: 184512 cgccttcatccgctccgcgtactcgacgttcttgtccctgaggaggtcgccgtcggcggc 184571

                                                                          
Query: 374    cacgacgagcacgcggccggcgtccatcgtctcaaggcttgggctgtccggcccgagcgg 433
               || || |||||||||||| |||||| || ||| |||||  ||||  ||||||||| |||
Sbjct: 184572 gaccaccagcacgcggccgacgtccaccgcctccaggctccggctcgccggcccgaacgg 184631

                                                                          
Query: 434    gttcatcagcgggtggtccttgttcgctccggcgggcaggaagaggcggcagtacctgtc 493
              ||| |  ||||||||||||||||  || |||||||||||   |||||||||||| | |||
Sbjct: 184632 gttgacgagcgggtggtccttgtcggcgccggcgggcagcgcgaggcggcagtagcggtc 184691

                                                                          
Query: 494    gcaggtttccctagtcaggaacgccgtcgccgttgagtcaagctcggactgcgtcggctg 553
              |||  | || |  ||||||||||| || ||||  |   | ||||| ||| ||||||||  
Sbjct: 184692 gcacatgtcgcgcgtcaggaacgcggtggccggcgccgccagctccgacggcgtcggcct 184751

                                                  
Query: 554    ctccgagcagaatgccggcatgagcaggatgtaccc 589
              |||||||  ||| ||||||||||| |||| ||||||
Sbjct: 184752 ctccgagatgaacgccggcatgaggaggacgtaccc 184787



 Score =  127 bits (64), Expect = 4e-26
 Identities = 94/104 (90%)
 Strand = Plus / Plus

                                                                          
Query: 189    atgaaccgcctgatgatccggacgagctcgccggtggccgctgacgtgggcttcaccccg 248
              |||||||||||||||| |  ||||||||||||||||||||| ||| | |||||||| |||
Sbjct: 184399 atgaaccgcctgatgacctcgacgagctcgccggtggccgccgacattggcttcacgccg 184458

                                                          
Query: 249    aagaacgcgtgctcctcgccggcgaacacgacgagctcgacgtc 292
              ||||||||||||||||||||||||||||| || ||||| |||||
Sbjct: 184459 aagaacgcgtgctcctcgccggcgaacaccaccagctccacgtc 184502



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                       
Query: 242    caccccgaagaacgcgtgctcctcgccggcgaacacgacga 282
              |||| |||||||  |||||| ||||||||||||| ||||||
Sbjct: 175015 cacctcgaagaagccgtgctgctcgccggcgaactcgacga 175055

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>ref|NM_018249.4| Homo sapiens CDK5 regulatory subunit associated protein 2 (CDK5RAP2),
            transcript variant 1, mRNA
          Length = 6230

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 351  ctcagcaggtcgccctccgcggccac 376
            ||||||||||||||||||| ||||||
Sbjct: 2832 ctcagcaggtcgccctccgtggccac 2807

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>ref|NM_001011649.1| Homo sapiens CDK5 regulatory subunit associated protein 2 (CDK5RAP2),
            transcript variant 2, mRNA
          Length = 5993

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 351  ctcagcaggtcgccctccgcggccac 376
            ||||||||||||||||||| ||||||
Sbjct: 2832 ctcagcaggtcgccctccgtggccac 2807

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>emb|AL353736.11| Human DNA sequence from clone RP11-412P1 on chromosome 9 Contains the 3'
              end of the CDK5RAP2 gene for CDK5 regulatory subunit
              associated protein 2 (C48), complete sequence
          Length = 148875

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 351    ctcagcaggtcgccctccgcggccac 376
              ||||||||||||||||||| ||||||
Sbjct: 146471 ctcagcaggtcgccctccgtggccac 146496

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>gb|AF448860.1| Homo sapiens hypothetical protein mRNA, complete cds
          Length = 6192

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 351  ctcagcaggtcgccctccgcggccac 376
            ||||||||||||||||||| ||||||
Sbjct: 2793 ctcagcaggtcgccctccgtggccac 2768

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>dbj|AK122913.1| Homo sapiens cDNA FLJ16590 fis, clone TESTI4001604
          Length = 6223

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 351  ctcagcaggtcgccctccgcggccac 376
            ||||||||||||||||||| ||||||
Sbjct: 2832 ctcagcaggtcgccctccgtggccac 2807

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>tpg|BK005504.1| TPA: TPA_exp: Homo sapiens centrosome protein Cep215 mRNA, complete
            cds
          Length = 6210

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 351  ctcagcaggtcgccctccgcggccac 376
            ||||||||||||||||||| ||||||
Sbjct: 2813 ctcagcaggtcgccctccgtggccac 2788

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>dbj|AB029320.1| Haloarcula japonica gene for cruxrhodopsin, complete cds
          Length = 1080

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 257 gtgctcctcgccggcgaacacgacga 282
           ||||||||||||||||||| ||||||
Sbjct: 462 gtgctcctcgccggcgaactcgacga 437

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>dbj|AB046853.2| Homo sapiens mRNA for KIAA1633 protein, partial cds
          Length = 5966

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 351  ctcagcaggtcgccctccgcggccac 376
            ||||||||||||||||||| ||||||
Sbjct: 2812 ctcagcaggtcgccctccgtggccac 2787

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>emb|BX640896.1|HSM807030 Homo sapiens mRNA; cDNA DKFZp686E2242 (from clone DKFZp686E2242)
          Length = 6248

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 351  ctcagcaggtcgccctccgcggccac 376
            ||||||||||||||||||| ||||||
Sbjct: 1959 ctcagcaggtcgccctccgtggccac 1934

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>emb|BX537421.1|HSM805723 Homo sapiens mRNA; cDNA DKFZp686E2146 (from clone DKFZp686E2146);
            complete cds
          Length = 5914

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 351  ctcagcaggtcgccctccgcggccac 376
            ||||||||||||||||||| ||||||
Sbjct: 2828 ctcagcaggtcgccctccgtggccac 2803

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>emb|AL833481.1|HSM804794 Homo sapiens mRNA; cDNA DKFZp686D0129 (from clone DKFZp686D0129)
          Length = 6246

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 351  ctcagcaggtcgccctccgcggccac 376
            ||||||||||||||||||| ||||||
Sbjct: 2831 ctcagcaggtcgccctccgtggccac 2806

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>emb|BX537759.1|HSM805844 Homo sapiens mRNA; cDNA DKFZp686O0188 (from clone DKFZp686O0188);
            complete cds
          Length = 6003

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 351  ctcagcaggtcgccctccgcggccac 376
            ||||||||||||||||||| ||||||
Sbjct: 2831 ctcagcaggtcgccctccgtggccac 2806

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>emb|AL133161.1|HSM801327 Homo sapiens mRNA; cDNA DKFZp434K0115 (from clone DKFZp434K0115);
           partial cds
          Length = 3926

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 351 ctcagcaggtcgccctccgcggccac 376
           ||||||||||||||||||| ||||||
Sbjct: 833 ctcagcaggtcgccctccgtggccac 808

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>ref|NM_184424.2| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1232

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 39/45 (86%)
 Strand = Plus / Minus

                                                        
Query: 408 aggcttgggctgtccggcccgagcgggttcatcagcgggtggtcc 452
           ||||| ||||||||||| |||| |||||||  || ||||||||||
Sbjct: 808 aggctggggctgtccggtccgaacgggttcgccaccgggtggtcc 764

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>ref|NM_186419.2| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1248

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                    
Query: 242 caccccgaagaacgcgtgctcctcgccggcgaacacgacga 282
           |||| |||||||  |||||| ||||||||||||| ||||||
Sbjct: 967 cacctcgaagaagccgtgctgctcgccggcgaactcgacga 927

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>gb|AF537126.1| Cochliobolus carbonum putative HOS3-like histone deacetylase (HDC4)
            gene, complete cds
          Length = 4178

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 284  ctcgacgtcatcgttctccttgccc 308
            |||||| ||||||||||||||||||
Sbjct: 2805 ctcgacatcatcgttctccttgccc 2781

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>emb|CR555306.1| Azoarcus sp. EbN1 complete genome
          Length = 4296230

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 379     cgagcacgcggccggcgtcca 399
               |||||||||||||||||||||
Sbjct: 4002088 cgagcacgcggccggcgtcca 4002068

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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 39/45 (86%)
 Strand = Plus / Plus

                                                            
Query: 408     aggcttgggctgtccggcccgagcgggttcatcagcgggtggtcc 452
               ||||| ||||||||||| |||| |||||||  || ||||||||||
Sbjct: 2956634 aggctggggctgtccggtccgaacgggttcgccaccgggtggtcc 2956678

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>dbj|AP003225.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0011G08
          Length = 139490

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 39/45 (86%)
 Strand = Plus / Plus

                                                          
Query: 408   aggcttgggctgtccggcccgagcgggttcatcagcgggtggtcc 452
             ||||| ||||||||||| |||| |||||||  || ||||||||||
Sbjct: 38151 aggctggggctgtccggtccgaacgggttcgccaccgggtggtcc 38195

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>dbj|AP003045.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0030H07
          Length = 168253

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 39/45 (86%)
 Strand = Plus / Plus

                                                           
Query: 408    aggcttgggctgtccggcccgagcgggttcatcagcgggtggtcc 452
              ||||| ||||||||||| |||| |||||||  || ||||||||||
Sbjct: 163632 aggctggggctgtccggtccgaacgggttcgccaccgggtggtcc 163676

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>dbj|AK073659.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033053C20, full
           insert sequence
          Length = 1231

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 39/45 (86%)
 Strand = Plus / Minus

                                                        
Query: 408 aggcttgggctgtccggcccgagcgggttcatcagcgggtggtcc 452
           ||||| ||||||||||| |||| |||||||  || ||||||||||
Sbjct: 807 aggctggggctgtccggtccgaacgggttcgccaccgggtggtcc 763

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>dbj|AK060305.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-007-A09, full
           insert sequence
          Length = 1274

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 39/45 (86%)
 Strand = Plus / Minus

                                                        
Query: 408 aggcttgggctgtccggcccgagcgggttcatcagcgggtggtcc 452
           ||||| ||||||||||| |||| |||||||  || ||||||||||
Sbjct: 806 aggctggggctgtccggtccgaacgggttcgccaccgggtggtcc 762

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>dbj|AK060082.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-306-D11, full
           insert sequence
          Length = 1248

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                    
Query: 242 caccccgaagaacgcgtgctcctcgccggcgaacacgacga 282
           |||| |||||||  |||||| ||||||||||||| ||||||
Sbjct: 967 cacctcgaagaagccgtgctgctcgccggcgaactcgacga 927

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>gb|DQ213981.1| Taeniopygia guttata clone 0061P0017D01 adenylate kinase 3 alpha
           like 1 variant 1-like mRNA, complete sequence
          Length = 961

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 345 ttgtccctcagcaggtcgcc 364
           ||||||||||||||||||||
Sbjct: 165 ttgtccctcagcaggtcgcc 146

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>gb|DQ213980.1| Taeniopygia guttata clone 0061P0011H08 adenylate kinase 3 alpha
           like 1 variant 1-like mRNA, complete sequence
          Length = 958

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 345 ttgtccctcagcaggtcgcc 364
           ||||||||||||||||||||
Sbjct: 162 ttgtccctcagcaggtcgcc 143

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>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence
          Length = 3181762

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 379     cgagcacgcggccggcgtccatcg 402
               ||||||||||||| ||||||||||
Sbjct: 1304432 cgagcacgcggcccgcgtccatcg 1304409

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>emb|CR391941.10| Zebrafish DNA sequence from clone DKEY-25O19 in linkage group 16,
              complete sequence
          Length = 187002

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 158    cctcctgtctcagcaggctg 177
              ||||||||||||||||||||
Sbjct: 132261 cctcctgtctcagcaggctg 132280

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>emb|CR388381.12| Zebrafish DNA sequence from clone CH211-222P22 in linkage group 16,
              complete sequence
          Length = 141855

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 158    cctcctgtctcagcaggctg 177
              ||||||||||||||||||||
Sbjct: 114284 cctcctgtctcagcaggctg 114265

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>gb|AY305378.1| Ralstonia eutropha H16 megaplasmid pHG1, complete sequence
          Length = 452156

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 213    agctcgccggtggccgctga 232
              ||||||||||||||||||||
Sbjct: 222431 agctcgccggtggccgctga 222450

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>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence
          Length = 3173005

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 379     cgagcacgcggccggcgtccatcg 402
               ||||||||||||| ||||||||||
Sbjct: 2621796 cgagcacgcggcccgcgtccatcg 2621773

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>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence
          Length = 2325379

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 379    cgagcacgcggccggcgtccatcg 402
              ||||||||||||| ||||||||||
Sbjct: 138392 cgagcacgcggcccgcgtccatcg 138415

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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 375      acgacgagcacgcggccggc 394
                ||||||||||||||||||||
Sbjct: 18925197 acgacgagcacgcggccggc 18925178

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>gb|AF322013.1|AF322012S2 Bradyrhizobium japonicum symbiotic gene region, part 2 of 2
          Length = 230573

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 309   cgcgccgccctcagccgctc 328
             ||||||||||||||||||||
Sbjct: 64269 cgcgccgccctcagccgctc 64288

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>gb|AF322012.1|AF322012S1 Bradyrhizobium japonicum symbiotic gene region, part 1 of 2
          Length = 180000

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 309    cgcgccgccctcagccgctc 328
              ||||||||||||||||||||
Sbjct: 110655 cgcgccgccctcagccgctc 110636

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>dbj|AP004137.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1297_D02
          Length = 104470

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 375   acgacgagcacgcggccggc 394
             ||||||||||||||||||||
Sbjct: 91950 acgacgagcacgcggccggc 91931

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>dbj|AP003947.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1198_B10
          Length = 119768

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 375   acgacgagcacgcggccggc 394
             ||||||||||||||||||||
Sbjct: 10117 acgacgagcacgcggccggc 10098

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>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 309     cgcgccgccctcagccgctc 328
               ||||||||||||||||||||
Sbjct: 2122754 cgcgccgccctcagccgctc 2122773



 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 309     cgcgccgccctcagccgctc 328
               ||||||||||||||||||||
Sbjct: 1989140 cgcgccgccctcagccgctc 1989121

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>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence
          Length = 3809201

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                           
Query: 236     gggcttcaccccgaagaacgcgtgctcc 263
               |||||| ||||||||||||||| |||||
Sbjct: 1695391 gggcttgaccccgaagaacgcgggctcc 1695418

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>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome
          Length = 3566135

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 320     cagccgctccgcgtactcca 339
               ||||||||||||||||||||
Sbjct: 3542353 cagccgctccgcgtactcca 3542372


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,570,181
Number of Sequences: 3902068
Number of extensions: 3570181
Number of successful extensions: 75328
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 74343
Number of HSP's gapped (non-prelim): 985
length of query: 597
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 574
effective length of database: 17,143,297,704
effective search space: 9840252882096
effective search space used: 9840252882096
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result