ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal7c12
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1FTSH2_ARATH (Q9FH02) Cell division protein ftsH homolog 2, chlor... 40 0.002
2FTSH1_ARATH (Q39102) Cell division protein ftsH homolog 1, chlor... 40 0.002
3FTSH_TOBAC (O82150) Cell division protein ftsH homolog, chloropl... 39 0.005
4FTSH_MEDSA (Q9BAE0) Cell division protein ftsH homolog, chloropl... 39 0.005

>FTSH2_ARATH (Q9FH02) Cell division protein ftsH homolog 2, chloroplast|
           precursor (EC 3.4.24.-)
          Length = 704

 Score = 40.0 bits (92), Expect = 0.002
 Identities = 18/21 (85%), Positives = 20/21 (95%)
 Frame = -2

Query: 124 TVDGXEFMSLFIDGQAELFVA 62
           TVDG EFMSLFIDGQAEL+V+
Sbjct: 684 TVDGEEFMSLFIDGQAELYVS 704



to top

>FTSH1_ARATH (Q39102) Cell division protein ftsH homolog 1, chloroplast|
           precursor (EC 3.4.24.-)
          Length = 716

 Score = 39.7 bits (91), Expect = 0.002
 Identities = 17/21 (80%), Positives = 20/21 (95%)
 Frame = -2

Query: 124 TVDGXEFMSLFIDGQAELFVA 62
           TVDG EFMSLFIDGQAEL+++
Sbjct: 696 TVDGEEFMSLFIDGQAELYIS 716



to top

>FTSH_TOBAC (O82150) Cell division protein ftsH homolog, chloroplast precursor|
           (EC 3.4.24.-) (DS9)
          Length = 714

 Score = 38.5 bits (88), Expect = 0.005
 Identities = 17/24 (70%), Positives = 22/24 (91%)
 Frame = -2

Query: 124 TVDGXEFMSLFIDGQAELFVA*VA 53
           TVDG EFMSLFIDG+AEL+++ V+
Sbjct: 687 TVDGEEFMSLFIDGKAELYISWVS 710



to top

>FTSH_MEDSA (Q9BAE0) Cell division protein ftsH homolog, chloroplast precursor|
           (EC 3.4.24.-)
          Length = 706

 Score = 38.5 bits (88), Expect = 0.005
 Identities = 17/21 (80%), Positives = 20/21 (95%)
 Frame = -2

Query: 124 TVDGXEFMSLFIDGQAELFVA 62
           TVDG EFMSLFIDG+AEL+V+
Sbjct: 686 TVDGEEFMSLFIDGKAELYVS 706


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,768,478
Number of Sequences: 219361
Number of extensions: 148092
Number of successful extensions: 334
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 333
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 334
length of database: 80,573,946
effective HSP length: 17
effective length of database: 76,844,809
effective search space used: 1844275416
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top