>gb|BT009457.1| Triticum aestivum clone wlp1c.pk007.f6:fis, full insert mRNA sequence
          Length = 1556

 Score =  107 bits (54), Expect = 8e-21
 Identities = 66/71 (92%)
 Strand = Plus / Minus

                                                                        
Query: 55   cgacttatgcgacaaacagctccgcctgcccgtcgatgaagaggctcatgaactccnnnc 114
            ||||||||||||| |||||||| |||||||||||||||||||||||||||||||||   |
Sbjct: 1366 cgacttatgcgacgaacagctctgcctgcccgtcgatgaagaggctcatgaactcctccc 1307

                       
Query: 115  cgtccacggtc 125
            |||||||||||
Sbjct: 1306 cgtccacggtc 1296

>gb|BT009112.1| Triticum aestivum clone wl1.pk0008.c2:fis, full insert mRNA
           sequence
          Length = 654

 Score =  107 bits (54), Expect = 8e-21
 Identities = 66/71 (92%)
 Strand = Plus / Minus

                                                                       
Query: 55  cgacttatgcgacaaacagctccgcctgcccgtcgatgaagaggctcatgaactccnnnc 114
           ||||||||||||| |||||||| |||||||||||||||||||||||||||||||||   |
Sbjct: 464 cgacttatgcgacgaacagctctgcctgcccgtcgatgaagaggctcatgaactcctccc 405

                      
Query: 115 cgtccacggtc 125
           |||||||||||
Sbjct: 404 cgtccacggtc 394

>gb|BT009148.1| Triticum aestivum clone wl1n.pk0059.g7:fis, full insert mRNA
           sequence
          Length = 890

 Score =  105 bits (53), Expect = 3e-20
 Identities = 65/70 (92%)
 Strand = Plus / Minus

                                                                       
Query: 56  gacttatgcgacaaacagctccgcctgcccgtcgatgaagaggctcatgaactccnnncc 115
           |||||||||||| |||||||| |||||||||||||||||||||||||||||||||   ||
Sbjct: 701 gacttatgcgacgaacagctctgcctgcccgtcgatgaagaggctcatgaactcctcccc 642

                     
Query: 116 gtccacggtc 125
           ||||||||||
Sbjct: 641 gtccacggtc 632

>gb|AY103957.1| Zea mays PCO116832 mRNA sequence
          Length = 1820

 Score = 67.9 bits (34), Expect = 7e-09
 Identities = 55/63 (87%)
 Strand = Plus / Minus

                                                                        
Query: 63   gcgacaaacagctccgcctgcccgtcgatgaagaggctcatgaactccnnnccgtccacg 122
            |||||||||||||| ||||| ||||| ||||| | |||||||||||||   |||||||||
Sbjct: 1445 gcgacaaacagctcggcctggccgtcaatgaacaagctcatgaactcctccccgtccacg 1386

               
Query: 123  gtc 125
            |||
Sbjct: 1385 gtc 1383

>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 61.9 bits (31), Expect = 4e-07
 Identities = 43/47 (91%)
 Strand = Plus / Plus

                                                               
Query: 63       gcgacaaacagctccgcctgcccgtcgatgaagaggctcatgaactc 109
                |||||||||| ||| ||||| ||||||||||| ||||||||||||||
Sbjct: 30354728 gcgacaaacaactctgcctgaccgtcgatgaacaggctcatgaactc 30354774

>dbj|AP003685.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0548E04
          Length = 138037

 Score = 61.9 bits (31), Expect = 4e-07
 Identities = 43/47 (91%)
 Strand = Plus / Plus

                                                             
Query: 63     gcgacaaacagctccgcctgcccgtcgatgaagaggctcatgaactc 109
              |||||||||| ||| ||||| ||||||||||| ||||||||||||||
Sbjct: 101323 gcgacaaacaactctgcctgaccgtcgatgaacaggctcatgaactc 101369

>dbj|AK065019.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001F19, full
            insert sequence
          Length = 2378

 Score = 61.9 bits (31), Expect = 4e-07
 Identities = 43/47 (91%)
 Strand = Plus / Minus

                                                           
Query: 63   gcgacaaacagctccgcctgcccgtcgatgaagaggctcatgaactc 109
            |||||||||| ||| ||||| ||||||||||| ||||||||||||||
Sbjct: 2093 gcgacaaacaactctgcctgaccgtcgatgaacaggctcatgaactc 2047

>dbj|AK061771.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-039-C10, full
            insert sequence
          Length = 1325

 Score = 61.9 bits (31), Expect = 4e-07
 Identities = 43/47 (91%)
 Strand = Plus / Minus

                                                           
Query: 63   gcgacaaacagctccgcctgcccgtcgatgaagaggctcatgaactc 109
            |||||||||| ||| ||||| ||||||||||| ||||||||||||||
Sbjct: 1149 gcgacaaacaactctgcctgaccgtcgatgaacaggctcatgaactc 1103

>gb|BT016970.1| Zea mays clone E04912707E08.c mRNA sequence
          Length = 202

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 63  gcgacaaacagctccgcctgcccgtcgatgaa 94
           |||||||||||||| ||||| ||||| |||||
Sbjct: 162 gcgacaaacagctcggcctggccgtcaatgaa 193

>gb|AE009134.1| Agrobacterium tumefaciens str. C58 circular chromosome, section 160
           of 256 of the complete sequence
          Length = 13735

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 79  cctgcccgtcgatgaagagg 98
           ||||||||||||||||||||
Sbjct: 470 cctgcccgtcgatgaagagg 489

>gb|AE007869.1| Agrobacterium tumefaciens str. C58, complete genome
          Length = 2841581

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 79      cctgcccgtcgatgaagagg 98
               ||||||||||||||||||||
Sbjct: 1766640 cctgcccgtcgatgaagagg 1766659

>gb|AC130218.4| Mus musculus BAC clone RP23-121N18 from chromosome 18, complete
             sequence
          Length = 213673

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 92    gaagaggctcatgaactcc 110
             |||||||||||||||||||
Sbjct: 81922 gaagaggctcatgaactcc 81904

>gb|U24241.2|SCU24241 Sorangium cellulosum acyl-CoA dehydrogenase (sorE),
             beta-hydroxybutyryl-CoA dehydrogenase (sorD), putative
             methoxymalonyl-CoA synthase (sorC), reductase (sorR),
             soraphen polyketide synthase A (sorA), soraphen polyketide
             synthase B (sorB), O-methyltransferase (sorM),
             beta-mannanase, and xylanse-arabinofuranosidase
             bifunctional enzyme genes, complete cds; and unknown genes
          Length = 67523

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 82    gcccgtcgatgaagaggctcatg 104
             ||||||||||| |||||||||||
Sbjct: 66243 gcccgtcgatgtagaggctcatg 66221

>dbj|AB017480.2| Nicotiana tabacum mRNA for chloroplast FtsH protease, complete cds
          Length = 2447

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                   
Query: 87   tcgatgaagaggctcatgaactc 109
            |||||||| ||||||||||||||
Sbjct: 2117 tcgatgaaaaggctcatgaactc 2095


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 390,820
Number of Sequences: 3902068
Number of extensions: 390820
Number of successful extensions: 22520
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 22490
Number of HSP's gapped (non-prelim): 30
length of query: 125
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 104
effective length of database: 17,151,101,840
effective search space: 1783714591360
effective search space used: 1783714591360
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)