| Clone Name | rbaal17e24 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_472910.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1653 Score = 190 bits (96), Expect = 4e-45 Identities = 258/312 (82%) Strand = Plus / Minus Query: 299 atataactttgaaccactggctctcagggtcgcaggttggatcttcggtcaggcacttgc 358 |||||| ||||||||||||||||||||| | ||| |||||||| |||| |||||||||| Sbjct: 1576 atataattttgaaccactggctctcaggattgcaatttggatctccggttaggcacttgc 1517 Query: 359 attgatccgttgtgatgacaccgtcagggcccgcatccaagcacactctagtcccattct 418 | ||| |||||||||| ||| ||||| ||||||| ||| ||||| || ||||| | Sbjct: 1516 acggatttgttgtgatgataccatcaggagtggcatccaggcatactctggttccatttt 1457 Query: 419 tggtgagttcggccgaaacatgcattcctgaatcagatattagctgccacttcgaacagg 478 | |||||||| | |||||||||||||||||||| ||||||||||||||||| |||| || Sbjct: 1456 tagtgagttcagtcgaaacatgcattcctgaatttgatattagctgccactttgaactgg 1397 Query: 479 atttgctgcagccagtcccgagctttgcagtatcacccacagacttggcctcaaggcatt 538 |||||||||| | ||||| |||| |||| | ||||| ||||||||| ||| ||||||| Sbjct: 1396 atttgctgcaatcggtcccaagctgtgcattctcaccgacagacttgacctggaggcatt 1337 Query: 539 gcccagtttgtttcagcacaagctcatacgtggaggtgtagttccaagcgttcgattcat 598 | ||||| |||| ||| || | ||| | || || ||||||||||||||||| ||||||| Sbjct: 1336 gaccagtgtgttgcagtaccaactcgtgtgttgatgtgtagttccaagcgtttgattcat 1277 Query: 599 cgcacggaccca 610 | || ||||||| Sbjct: 1276 cacatggaccca 1265
>emb|AL606614.3|OSJN00047 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0011N17, complete sequence Length = 129498 Score = 190 bits (96), Expect = 4e-45 Identities = 258/312 (82%) Strand = Plus / Minus Query: 299 atataactttgaaccactggctctcagggtcgcaggttggatcttcggtcaggcacttgc 358 |||||| ||||||||||||||||||||| | ||| |||||||| |||| |||||||||| Sbjct: 35648 atataattttgaaccactggctctcaggattgcaatttggatctccggttaggcacttgc 35589 Query: 359 attgatccgttgtgatgacaccgtcagggcccgcatccaagcacactctagtcccattct 418 | ||| |||||||||| ||| ||||| ||||||| ||| ||||| || ||||| | Sbjct: 35588 acggatttgttgtgatgataccatcaggagtggcatccaggcatactctggttccatttt 35529 Query: 419 tggtgagttcggccgaaacatgcattcctgaatcagatattagctgccacttcgaacagg 478 | |||||||| | |||||||||||||||||||| ||||||||||||||||| |||| || Sbjct: 35528 tagtgagttcagtcgaaacatgcattcctgaatttgatattagctgccactttgaactgg 35469 Query: 479 atttgctgcagccagtcccgagctttgcagtatcacccacagacttggcctcaaggcatt 538 |||||||||| | ||||| |||| |||| | ||||| ||||||||| ||| ||||||| Sbjct: 35468 atttgctgcaatcggtcccaagctgtgcattctcaccgacagacttgacctggaggcatt 35409 Query: 539 gcccagtttgtttcagcacaagctcatacgtggaggtgtagttccaagcgttcgattcat 598 | ||||| |||| ||| || | ||| | || || ||||||||||||||||| ||||||| Sbjct: 35408 gaccagtgtgttgcagtaccaactcgtgtgttgatgtgtagttccaagcgtttgattcat 35349 Query: 599 cgcacggaccca 610 | || ||||||| Sbjct: 35348 cacatggaccca 35337 Score = 121 bits (61), Expect = 3e-24 Identities = 205/253 (81%) Strand = Plus / Minus Query: 299 atataactttgaaccactggctctcagggtcgcaggttggatcttcggtcaggcacttgc 358 |||||| |||||||||||| |||||||| | ||| | |||||| |||| |||||||||| Sbjct: 30773 atataattttgaaccactgactctcaggattgcaattcggatctacggttaggcacttgc 30714 Query: 359 attgatccgttgtgatgacaccgtcagggcccgcatccaagcacactctagtcccattct 418 | |||| || ||||| || ||||| | || |||||||| ||||| || || || | Sbjct: 30713 actgatttgtcgtgatatttccatcaggactggcctccaagcatactctggttccgttat 30654 Query: 419 tggtgagttcggccgaaacatgcattcctgaatcagatattagctgccacttcgaacagg 478 |||||||||| | ||||||||||||||||||| |||| ||||| |||||| |||| || Sbjct: 30653 tggtgagttcagttgaaacatgcattcctgaatttgatagtagcttccactttgaactgg 30594 Query: 479 atttgctgcagccagtcccgagctttgcagtatcacccacagacttggcctcaaggcatt 538 |||||||||| | || || ||||||||| | ||||| |||||||| |||| ||||||| Sbjct: 30593 atttgctgcaactggtgccaagctttgcattctcaccaacagacttcgcctggaggcatt 30534 Query: 539 gcccagtttgttt 551 | ||||||||||| Sbjct: 30533 gtccagtttgttt 30521 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 307 ttgaaccactggctctcagggtcgcag 333 ||||||||||||||||| ||||||||| Sbjct: 39853 ttgaaccactggctctccgggtcgcag 39827
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 190 bits (96), Expect = 4e-45 Identities = 258/312 (82%) Strand = Plus / Minus Query: 299 atataactttgaaccactggctctcagggtcgcaggttggatcttcggtcaggcacttgc 358 |||||| ||||||||||||||||||||| | ||| |||||||| |||| |||||||||| Sbjct: 24038669 atataattttgaaccactggctctcaggattgcaatttggatctccggttaggcacttgc 24038610 Query: 359 attgatccgttgtgatgacaccgtcagggcccgcatccaagcacactctagtcccattct 418 | ||| |||||||||| ||| ||||| ||||||| ||| ||||| || ||||| | Sbjct: 24038609 acggatttgttgtgatgataccatcaggagtggcatccaggcatactctggttccatttt 24038550 Query: 419 tggtgagttcggccgaaacatgcattcctgaatcagatattagctgccacttcgaacagg 478 | |||||||| | |||||||||||||||||||| ||||||||||||||||| |||| || Sbjct: 24038549 tagtgagttcagtcgaaacatgcattcctgaatttgatattagctgccactttgaactgg 24038490 Query: 479 atttgctgcagccagtcccgagctttgcagtatcacccacagacttggcctcaaggcatt 538 |||||||||| | ||||| |||| |||| | ||||| ||||||||| ||| ||||||| Sbjct: 24038489 atttgctgcaatcggtcccaagctgtgcattctcaccgacagacttgacctggaggcatt 24038430 Query: 539 gcccagtttgtttcagcacaagctcatacgtggaggtgtagttccaagcgttcgattcat 598 | ||||| |||| ||| || | ||| | || || ||||||||||||||||| ||||||| Sbjct: 24038429 gaccagtgtgttgcagtaccaactcgtgtgttgatgtgtagttccaagcgtttgattcat 24038370 Query: 599 cgcacggaccca 610 | || ||||||| Sbjct: 24038369 cacatggaccca 24038358 Score = 121 bits (61), Expect = 3e-24 Identities = 205/253 (81%) Strand = Plus / Minus Query: 299 atataactttgaaccactggctctcagggtcgcaggttggatcttcggtcaggcacttgc 358 |||||| |||||||||||| |||||||| | ||| | |||||| |||| |||||||||| Sbjct: 24033794 atataattttgaaccactgactctcaggattgcaattcggatctacggttaggcacttgc 24033735 Query: 359 attgatccgttgtgatgacaccgtcagggcccgcatccaagcacactctagtcccattct 418 | |||| || ||||| || ||||| | || |||||||| ||||| || || || | Sbjct: 24033734 actgatttgtcgtgatatttccatcaggactggcctccaagcatactctggttccgttat 24033675 Query: 419 tggtgagttcggccgaaacatgcattcctgaatcagatattagctgccacttcgaacagg 478 |||||||||| | ||||||||||||||||||| |||| ||||| |||||| |||| || Sbjct: 24033674 tggtgagttcagttgaaacatgcattcctgaatttgatagtagcttccactttgaactgg 24033615 Query: 479 atttgctgcagccagtcccgagctttgcagtatcacccacagacttggcctcaaggcatt 538 |||||||||| | || || ||||||||| | ||||| |||||||| |||| ||||||| Sbjct: 24033614 atttgctgcaactggtgccaagctttgcattctcaccaacagacttcgcctggaggcatt 24033555 Query: 539 gcccagtttgttt 551 | ||||||||||| Sbjct: 24033554 gtccagtttgttt 24033542 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 307 ttgaaccactggctctcagggtcgcag 333 ||||||||||||||||| ||||||||| Sbjct: 24042874 ttgaaccactggctctccgggtcgcag 24042848
>emb|AL442104.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0510A06, complete sequence Length = 90767 Score = 190 bits (96), Expect = 4e-45 Identities = 258/312 (82%) Strand = Plus / Minus Query: 299 atataactttgaaccactggctctcagggtcgcaggttggatcttcggtcaggcacttgc 358 |||||| ||||||||||||||||||||| | ||| |||||||| |||| |||||||||| Sbjct: 4919 atataattttgaaccactggctctcaggattgcaatttggatctccggttaggcacttgc 4860 Query: 359 attgatccgttgtgatgacaccgtcagggcccgcatccaagcacactctagtcccattct 418 | ||| |||||||||| ||| ||||| ||||||| ||| ||||| || ||||| | Sbjct: 4859 acggatttgttgtgatgataccatcaggagtggcatccaggcatactctggttccatttt 4800 Query: 419 tggtgagttcggccgaaacatgcattcctgaatcagatattagctgccacttcgaacagg 478 | |||||||| | |||||||||||||||||||| ||||||||||||||||| |||| || Sbjct: 4799 tagtgagttcagtcgaaacatgcattcctgaatttgatattagctgccactttgaactgg 4740 Query: 479 atttgctgcagccagtcccgagctttgcagtatcacccacagacttggcctcaaggcatt 538 |||||||||| | ||||| |||| |||| | ||||| ||||||||| ||| ||||||| Sbjct: 4739 atttgctgcaatcggtcccaagctgtgcattctcaccgacagacttgacctggaggcatt 4680 Query: 539 gcccagtttgtttcagcacaagctcatacgtggaggtgtagttccaagcgttcgattcat 598 | ||||| |||| ||| || | ||| | || || ||||||||||||||||| ||||||| Sbjct: 4679 gaccagtgtgttgcagtaccaactcgtgtgttgatgtgtagttccaagcgtttgattcat 4620 Query: 599 cgcacggaccca 610 | || ||||||| Sbjct: 4619 cacatggaccca 4608 Score = 91.7 bits (46), Expect = 3e-15 Identities = 154/190 (81%) Strand = Plus / Minus Query: 299 atataactttgaaccactggctctcagggtcgcaggttggatcttcggtcaggcacttgc 358 |||||| |||||||||||| |||||||| | ||| | |||||| |||| |||||||||| Sbjct: 205 atataattttgaaccactgactctcaggattgcaattcggatctacggttaggcacttgc 146 Query: 359 attgatccgttgtgatgacaccgtcagggcccgcatccaagcacactctagtcccattct 418 | |||| || ||||| || ||||| | || |||||||| ||||| || || || | Sbjct: 145 actgatttgtcgtgatatttccatcaggactggcctccaagcatactctggttccgttat 86 Query: 419 tggtgagttcggccgaaacatgcattcctgaatcagatattagctgccacttcgaacagg 478 |||||||||| | ||||||||||||||||||| |||| ||||| |||||| |||| || Sbjct: 85 tggtgagttcagttgaaacatgcattcctgaatttgatagtagcttccactttgaactgg 26 Query: 479 atttgctgca 488 |||||||||| Sbjct: 25 atttgctgca 16 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 307 ttgaaccactggctctcagggtcgcag 333 ||||||||||||||||| ||||||||| Sbjct: 9116 ttgaaccactggctctccgggtcgcag 9090
>ref|XM_472909.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1665 Score = 121 bits (61), Expect = 3e-24 Identities = 205/253 (81%) Strand = Plus / Minus Query: 299 atataactttgaaccactggctctcagggtcgcaggttggatcttcggtcaggcacttgc 358 |||||| |||||||||||| |||||||| | ||| | |||||| |||| |||||||||| Sbjct: 1582 atataattttgaaccactgactctcaggattgcaattcggatctacggttaggcacttgc 1523 Query: 359 attgatccgttgtgatgacaccgtcagggcccgcatccaagcacactctagtcccattct 418 | |||| || ||||| || ||||| | || |||||||| ||||| || || || | Sbjct: 1522 actgatttgtcgtgatatttccatcaggactggcctccaagcatactctggttccgttat 1463 Query: 419 tggtgagttcggccgaaacatgcattcctgaatcagatattagctgccacttcgaacagg 478 |||||||||| | ||||||||||||||||||| |||| ||||| |||||| |||| || Sbjct: 1462 tggtgagttcagttgaaacatgcattcctgaatttgatagtagcttccactttgaactgg 1403 Query: 479 atttgctgcagccagtcccgagctttgcagtatcacccacagacttggcctcaaggcatt 538 |||||||||| | || || ||||||||| | ||||| |||||||| |||| ||||||| Sbjct: 1402 atttgctgcaactggtgccaagctttgcattctcaccaacagacttcgcctggaggcatt 1343 Query: 539 gcccagtttgttt 551 | ||||||||||| Sbjct: 1342 gtccagtttgttt 1330
>dbj|AK109889.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-149-E03, full insert sequence Length = 1992 Score = 121 bits (61), Expect = 3e-24 Identities = 205/253 (81%) Strand = Plus / Minus Query: 299 atataactttgaaccactggctctcagggtcgcaggttggatcttcggtcaggcacttgc 358 |||||| |||||||||||| |||||||| | ||| | |||||| |||| |||||||||| Sbjct: 1592 atataattttgaaccactgactctcaggattgcaattcggatctacggttaggcacttgc 1533 Query: 359 attgatccgttgtgatgacaccgtcagggcccgcatccaagcacactctagtcccattct 418 | |||| || ||||| || ||||| | || |||||||| ||||| || || || | Sbjct: 1532 actgatttgtcgtgatatttccatcaggactggcctccaagcatactctggttccgttat 1473 Query: 419 tggtgagttcggccgaaacatgcattcctgaatcagatattagctgccacttcgaacagg 478 |||||||||| | ||||||||||||||||||| |||| ||||| |||||| |||| || Sbjct: 1472 tggtgagttcagttgaaacatgcattcctgaatttgatagtagcttccactttgaactgg 1413 Query: 479 atttgctgcagccagtcccgagctttgcagtatcacccacagacttggcctcaaggcatt 538 |||||||||| | || || ||||||||| | ||||| |||||||| |||| ||||||| Sbjct: 1412 atttgctgcaactggtgccaagctttgcattctcaccaacagacttcgcctggaggcatt 1353 Query: 539 gcccagtttgttt 551 | ||||||||||| Sbjct: 1352 gtccagtttgttt 1340
>ref|XM_472911.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1668 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 307 ttgaaccactggctctcagggtcgcag 333 ||||||||||||||||| ||||||||| Sbjct: 1574 ttgaaccactggctctccgggtcgcag 1548
>dbj|AK119297.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-130-E08, full insert sequence Length = 2877 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 307 ttgaaccactggctctcagggtcgcag 333 ||||||||||||||||| ||||||||| Sbjct: 358 ttgaaccactggctctccgggtcgcag 384
>ref|NM_001016221.2| Xenopus tropicalis hypothetical protein LOC548975 (LOC548975), mRNA Length = 2625 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 473 aacaggatttgctgcagccag 493 ||||||||||||||||||||| Sbjct: 1540 aacaggatttgctgcagccag 1520
>gb|AC158384.2| Mus musculus BAC clone RP24-97I24 from chromosome 9, complete sequence Length = 163817 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 47 tttgttttgacagaaaaagaa 67 ||||||||||||||||||||| Sbjct: 15741 tttgttttgacagaaaaagaa 15761
>gb|AC156640.2| Mus musculus BAC clone RP23-313M2 from chromosome 9, complete sequence Length = 175708 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 47 tttgttttgacagaaaaagaa 67 ||||||||||||||||||||| Sbjct: 38587 tttgttttgacagaaaaagaa 38567
>emb|CR926305.2| Xenopus tropicalis finished cDNA, clone TEgg078c13 Length = 2625 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 473 aacaggatttgctgcagccag 493 ||||||||||||||||||||| Sbjct: 1540 aacaggatttgctgcagccag 1520
>gb|AC004829.2| Homo sapiens PAC clone RP4-530J23 from 7, complete sequence Length = 129837 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 43 gtgatttgttttgacagaaaaaga 66 |||||||| ||||||||||||||| Sbjct: 62019 gtgatttgctttgacagaaaaaga 61996
>gb|AC146161.2| Pan troglodytes BAC clone RP43-1G6 from 7, complete sequence Length = 205885 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 43 gtgatttgttttgacagaaaaaga 66 |||||||| ||||||||||||||| Sbjct: 39719 gtgatttgctttgacagaaaaaga 39742
>gb|AC145091.1| Pan troglodytes BAC clone RP43-12F8 from 7, complete sequence Length = 175672 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 43 gtgatttgttttgacagaaaaaga 66 |||||||| ||||||||||||||| Sbjct: 163884 gtgatttgctttgacagaaaaaga 163907
>emb|AL731573.8| Human DNA sequence from clone RP11-215C13 on chromosome 10, complete sequence Length = 131465 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 56 acagaaaaagaaagtgctta 75 |||||||||||||||||||| Sbjct: 95286 acagaaaaagaaagtgctta 95267
>emb|AL021879.3|HS209B9 Human DNA sequence from clone RP1-209B9 on chromosome 20p12 Contains the HAO1 gene for hydroxyacid oxidase (glycolate oxidase) 1, ESTs, STSs and GSSs, complete sequence Length = 98569 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 54 tgacagaaaaagaaagtgct 73 |||||||||||||||||||| Sbjct: 45075 tgacagaaaaagaaagtgct 45094
>emb|AL589651.8| Mouse DNA sequence from clone RP23-138F20 on chromosome 13 Contains five genes for olfactory receptors, a novel gene, the H1f5 gene for H1 histone family member 5, three genes and one pseudogene for H2a histone family members, four genes for H2b, two genes for H4, and two genes for H3 histone family members and seven CpG islands, complete sequence Length = 222823 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 9 tttattctgaactgaacaac 28 |||||||||||||||||||| Sbjct: 98541 tttattctgaactgaacaac 98522
>emb|BX511073.3| Zebrafish DNA sequence from clone DKEY-245I10 in linkage group 8, complete sequence Length = 218866 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 51 ttttgacagaaaaagaaagt 70 |||||||||||||||||||| Sbjct: 214302 ttttgacagaaaaagaaagt 214283
>gb|AC026362.38| Homo sapiens 12 BAC RP11-197N18 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 163077 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 267 agaggcctcacctggcatgc 286 |||||||||||||||||||| Sbjct: 150040 agaggcctcacctggcatgc 150021
>gb|AF275265.3|AF275265 Mus musculus receptor protein tyrosine phosphatase-rho (Ptprt) gene, exons 10 and 11 and partial cds Length = 5957 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 267 agaggcctcacctggcatgcctct 290 ||||||||||||| |||||||||| Sbjct: 3377 agaggcctcaccttgcatgcctct 3400
>gb|AC132956.4| Mus musculus BAC clone RP23-106K20 from chromosome 7, complete sequence Length = 195204 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 50 gttttgacagaaaaagaaag 69 |||||||||||||||||||| Sbjct: 52418 gttttgacagaaaaagaaag 52437
>gb|AC175034.1| Mus musculus BAC clone RP23-204E23 from chromosome 7, complete sequence Length = 208487 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 50 gttttgacagaaaaagaaag 69 |||||||||||||||||||| Sbjct: 58251 gttttgacagaaaaagaaag 58232
>emb|AL935283.16| Zebrafish DNA sequence from clone CH211-247O1 in linkage group 7, complete sequence Length = 197927 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 51 ttttgacagaaaaagaaagt 70 |||||||||||||||||||| Sbjct: 37316 ttttgacagaaaaagaaagt 37335
>gb|BC089118.1| Xenopus laevis mis5p, mRNA (cDNA clone MGC:85070 IMAGE:6866732), complete cds Length = 2642 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 474 acaggatttgctgcagccag 493 |||||||||||||||||||| Sbjct: 1567 acaggatttgctgcagccag 1548
>gb|U44050.1|XLU44050 Xenopus laevis mis5 mRNA, complete cds Length = 2616 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 474 acaggatttgctgcagccag 493 |||||||||||||||||||| Sbjct: 1562 acaggatttgctgcagccag 1543
>emb|AL591586.8| Mouse DNA sequence from clone RP23-126L18 on chromosome 2, complete sequence Length = 187043 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 267 agaggcctcacctggcatgcctct 290 ||||||||||||| |||||||||| Sbjct: 154961 agaggcctcaccttgcatgcctct 154938 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,005,392 Number of Sequences: 3902068 Number of extensions: 5005392 Number of successful extensions: 89493 Number of sequences better than 10.0: 27 Number of HSP's better than 10.0 without gapping: 27 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 89418 Number of HSP's gapped (non-prelim): 67 length of query: 632 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 609 effective length of database: 17,143,297,704 effective search space: 10440268301736 effective search space used: 10440268301736 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)