>NPC2_ASPOR (O94183) Phosphatidylglycerol/phosphatidylinositol transfer protein|
           precursor (PG/PI-TP)
          Length = 175

 Score = 57.0 bits (136), Expect = 5e-08
 Identities = 35/129 (27%), Positives = 58/129 (44%), Gaps = 7/129 (5%)
 Frame = -3

Query: 633 VEYCNKHKNYPVKVSGVEIVPDPVERGVPATFKISASTDKNITEGKLVI-DVKYWIFNVY 457
           +EYCN      + +  V++ P+P   G       S +  + I +G  V+ +VKY +  + 
Sbjct: 47  LEYCNDPSGDILDIKQVDLSPNPPLPGKTLAITASGTLREKIEDGAYVLLEVKYGLITLV 106

Query: 456 SETDDIC-----TKTDCP-ATSDFELSHSQTLPSITPPGSYTIQMKMLGKHDEELSCISF 295
            +T D+C      +  CP    D  L+    LP   PPG YT+Q  +     E ++C+  
Sbjct: 107 RQTADLCEQLVNVELKCPLGPGDMTLTKQVDLPKQIPPGKYTVQADVFNSDGEHITCLK- 165

Query: 294 GFSIGFLAP 268
             +I F  P
Sbjct: 166 ALNIEFKGP 174

>NPC2_ASPFU (Q4X136) Phosphatidylglycerol/phosphatidylinositol transfer protein|
           precursor (PG/PI-TP)
          Length = 175

 Score = 54.7 bits (130), Expect = 2e-07
 Identities = 29/116 (25%), Positives = 57/116 (49%), Gaps = 7/116 (6%)
 Frame = -3

Query: 627 YCNKHKNYPVKVSGVEIVPDPVERGVPATFKISASTDKNITEGKLV-IDVKYWIFNVYSE 451
           YC+      +++  V++VP+P   G   +   S +  + + EG  V ++VKY +  +  +
Sbjct: 49  YCSDPSGNILQIESVDLVPNPPLPGQTLSINASGNLKERVEEGAYVALEVKYGLITLIKQ 108

Query: 450 TDDICTKT-----DCPATS-DFELSHSQTLPSITPPGSYTIQMKMLGKHDEELSCI 301
           T D+C +      +CP    +  L+    LPS  PPG Y +   +  K  ++++C+
Sbjct: 109 TADLCEQIKNVDLECPLEKGEMTLTKQVDLPSHIPPGKYNVHADVYTKDGKKITCL 164

>NPC2_CANAL (Q5A8A2) Phosphatidylglycerol/phosphatidylinositol transfer protein|
           precursor (PG/PI-TP)
          Length = 192

 Score = 54.7 bits (130), Expect = 2e-07
 Identities = 33/119 (27%), Positives = 58/119 (48%), Gaps = 7/119 (5%)
 Frame = -3

Query: 633 VEYCNKHKNYPVKVSGVEIVPDPVERGVPATFKISASTDKNITEGKLV-IDVKYWIFNVY 457
           +E C+  +   + +  V + P+P   G   TF    + DK I EG  V ++V+Y    + 
Sbjct: 66  IEVCDASEKQLLHLDEVIVTPNPPVAGQNLTFTAVGTLDKTIEEGAYVEVEVRYGFIKLI 125

Query: 456 SETDDIC---TKTD--CPATSDFE-LSHSQTLPSITPPGSYTIQMKMLGKHDEELSCIS 298
            +T D+C    K D  CP  S  + ++ +  +P   PPG Y +  +   K DE ++C++
Sbjct: 126 HQTYDLCEEIVKVDLQCPIKSGKQTITKNVEIPEEVPPGKYLVVARAYTKDDEYITCLT 184

>NPC2_KLULA (Q6CNE0) Phosphatidylglycerol/phosphatidylinositol transfer protein|
           precursor (PG/PI-TP)
          Length = 173

 Score = 54.3 bits (129), Expect = 3e-07
 Identities = 31/119 (26%), Positives = 59/119 (49%), Gaps = 10/119 (8%)
 Frame = -3

Query: 624 CNKHKNYPVKVSGVEIVPDPVERGVPATFKISASTDKNITEGKLV-IDVKYWIFNVYSET 448
           C+  ++  + V+ V +VP+P +RG   T   +      I EG  + I+V+     + S+T
Sbjct: 47  CDVDQSQSLDVTQVNLVPNPPQRGENLTIAAAGVLQTTIEEGAYIDIEVRLGYIKLISQT 106

Query: 447 DDICTKTD--------CPATSD-FELSHSQTLPSITPPGSYTIQMKMLGKHDEELSCIS 298
            D+C + +        CP     +EL+    +PS  PPG Y++  +     DE+++C++
Sbjct: 107 YDLCEQLEENDIDGLKCPIEEGVYELNKIVEIPSEVPPGKYSVIARAYNVDDEQITCLT 165

>NPC2_MAGGR (Q52FS9) Phosphatidylglycerol/phosphatidylinositol transfer protein|
           precursor (PG/PI-TP)
          Length = 178

 Score = 54.3 bits (129), Expect = 3e-07
 Identities = 30/113 (26%), Positives = 58/113 (51%), Gaps = 7/113 (6%)
 Frame = -3

Query: 615 HKNYPVKVSGVEIVPDPVERGVPATFKISASTDKNITEGKLV-IDVKYWIFNVYSETDDI 439
           HK+  +K++ V++ P+P + G     K S    + I EG  + + VKY +  + +   D+
Sbjct: 49  HKDDILKITKVDLSPNPPKAGESLVIKASGDVTQKIEEGAYINLSVKYGLIRLINTKADL 108

Query: 438 CTKT-----DCPATSD-FELSHSQTLPSITPPGSYTIQMKMLGKHDEELSCIS 298
           C +      +CP      ++  S  LP+  PPG YT+   +  K ++++SC++
Sbjct: 109 CEQIKNVDLECPIDEGKLDIVKSVDLPNEIPPGKYTVFADVYTKDNKKISCLT 161

>NPC2_EMENI (Q5B0Q1) Phosphatidylglycerol/phosphatidylinositol transfer protein|
           precursor (PG/PI-TP)
          Length = 169

 Score = 52.8 bits (125), Expect = 9e-07
 Identities = 28/118 (23%), Positives = 59/118 (50%), Gaps = 7/118 (5%)
 Frame = -3

Query: 633 VEYCNKHKNYPVKVSGVEIVPDPVERGVPATFKISASTDKNITEGK-LVIDVKYWIFNVY 457
           +EYC++     ++++ V++ P+P + G     + + +  + I  G  +V++VKY +  + 
Sbjct: 45  LEYCSEPSGDILEINSVDLAPNPPKAGTTLKIRAAGNLHERIEAGAYVVLEVKYGLITLL 104

Query: 456 SETDDICTK-----TDCP-ATSDFELSHSQTLPSITPPGSYTIQMKMLGKHDEELSCI 301
            +T D+C +       CP       L+    LPS  P G YT+   +  K ++ ++C+
Sbjct: 105 RDTADLCAQLTNVDLQCPLEEGPMVLTKEVDLPSQIPRGRYTVHADVYTKDNKRITCL 162

>NPC2_ASHGO (Q756Q3) Phosphatidylglycerol/phosphatidylinositol transfer protein|
           precursor (PG/PI-TP)
          Length = 213

 Score = 51.2 bits (121), Expect = 3e-06
 Identities = 30/118 (25%), Positives = 57/118 (48%), Gaps = 9/118 (7%)
 Frame = -3

Query: 624 CNKHKNYPVKVSGVEIVPDPVERGVPATFKISASTDKNITEGKLV-IDVKYWIFNVYSET 448
           C+  +++ + V  +EI P+P  RG   T +        + +G  V ++V+     + SET
Sbjct: 50  CDLDEDHLLDVQEIEITPNPPHRGKNLTVEARGDLFGPVEDGAYVTVEVRLGYIKLLSET 109

Query: 447 DDICTKTD-------CPATS-DFELSHSQTLPSITPPGSYTIQMKMLGKHDEELSCIS 298
            D+C + +       CP    ++ELS +  +P   PPG Y +  +     DE ++C++
Sbjct: 110 FDLCKELEENDLGLQCPLEEGEYELSKTVEIPQQVPPGRYHVVARAYTVDDEPITCLT 167

>NPC2_NEUCR (Q7RZ85) Phosphatidylglycerol/phosphatidylinositol transfer protein|
           precursor (PG/PI-TP)
          Length = 177

 Score = 49.7 bits (117), Expect = 7e-06
 Identities = 33/121 (27%), Positives = 58/121 (47%), Gaps = 12/121 (9%)
 Frame = -3

Query: 600 VKVSGVEIVPDPVERGVPATFKISASTDKNITEGKLV-IDVKYWIFNVYSETDDIC---- 436
           V +  V + P+P E G   T + S    + I EG  V + VKY    + + + D+C    
Sbjct: 54  VTIEEVILTPNPPEAGQTLTIEASGIVKEAIEEGAYVNLQVKYGYIRLINTSADLCKEMK 113

Query: 435 -TKTDCPATSD-FELSHSQTLPSITPPGSYTIQMKMLGKHDEELSCIS----FG-FSIGF 277
             + +CP       ++ +  LP   PPG YT++  +    D+ ++C++    FG  ++GF
Sbjct: 114 NVELECPIKKGRLSITKNVELPKEIPPGKYTVEADVYNSDDKHITCLTATVFFGRKTLGF 173

Query: 276 L 274
           L
Sbjct: 174 L 174

>NPC2_DEBHA (Q6BV42) Phosphatidylglycerol/phosphatidylinositol transfer protein|
           precursor (PG/PI-TP)
          Length = 196

 Score = 48.5 bits (114), Expect = 2e-05
 Identities = 31/108 (28%), Positives = 53/108 (49%), Gaps = 7/108 (6%)
 Frame = -3

Query: 600 VKVSGVEIVPDPVERGVPATFKISASTDKNITEGKLV-IDVKYWIFNVYSETDDIC---T 433
           + +  V I P+P  RG   TF       ++I +G  V +DV+Y    +  +T D+C   T
Sbjct: 81  LNLQSVVIDPNPPLRGENLTFVAKGVLSQDIEDGAYVEVDVRYGFIKLLHQTFDLCEEIT 140

Query: 432 KTD--CPATSDFELSHSQT-LPSITPPGSYTIQMKMLGKHDEELSCIS 298
           K D  CP +   ++   +  +P+  PPG Y +  +   K D  ++C+S
Sbjct: 141 KIDLECPISKGQQVIEKKVEIPAEVPPGKYIVSARAYTKDDIFITCLS 188

>NPC2_YARLI (Q6CHU5) Phosphatidylglycerol/phosphatidylinositol transfer protein|
           precursor (PG/PI-TP)
          Length = 189

 Score = 48.1 bits (113), Expect = 2e-05
 Identities = 27/118 (22%), Positives = 58/118 (49%), Gaps = 7/118 (5%)
 Frame = -3

Query: 633 VEYCNKHKNYPVKVSGVEIVPDPVERGVPATFKISASTDKNITEGKLV-IDVKYWIFNVY 457
           +  C+      +++  + I P+P  +G   T + S    +++ EG  + ++V+Y    + 
Sbjct: 62  ISLCDAEYEQLLEIKHLSIDPNPPAKGQNLTIEASGYLYEDVEEGAYIEVEVRYGYIRLI 121

Query: 456 SETDDICTKTD-----CPATS-DFELSHSQTLPSITPPGSYTIQMKMLGKHDEELSCI 301
           S+T D+C +++     CP  + D +L+    LP+  PPG Y    +     D+ ++C+
Sbjct: 122 SQTLDLCEQSEQVDWSCPIKAGDLKLNKQIELPNEIPPGKYVAVARAYTVDDDLITCL 179

>NPC2_USTMA (Q4P580) Phosphatidylglycerol/phosphatidylinositol transfer protein|
           precursor (PG/PI-TP)
          Length = 193

 Score = 46.6 bits (109), Expect = 6e-05
 Identities = 26/117 (22%), Positives = 49/117 (41%), Gaps = 9/117 (7%)
 Frame = -3

Query: 600 VKVSGVEIVPDPVERGVPATFKISASTDKNITEGKLV-IDVKYWIFNVYSETDDICTKT- 427
           V V  + + PDP   G   T +   +    +++G    + VK  +  + +   D+C +  
Sbjct: 75  VNVESIVVSPDPPVPGQNLTVRAKGTVKDEVSDGTFADVIVKLGLIRLLARRFDVCEQAR 134

Query: 426 ------DCPATS-DFELSHSQTLPSITPPGSYTIQMKMLGKHDEELSCISFGFSIGF 277
                  CP ++ ++EL H+  LP   PPG + + +    +    L C+      GF
Sbjct: 135 ESNADLQCPLSAGEYELEHTVALPREIPPGKFNVHITGENQDGSNLLCLDLSIQFGF 191

>NPC2_CANGA (Q6FNB1) Phosphatidylglycerol/phosphatidylinositol transfer protein|
           precursor (PG/PI-TP)
          Length = 185

 Score = 45.4 bits (106), Expect = 1e-04
 Identities = 28/123 (22%), Positives = 57/123 (46%), Gaps = 11/123 (8%)
 Frame = -3

Query: 633 VEYCNKHKNYPVKVSGVEIVPDPVERGVPATFKISASTDKNITEGKLV-IDVKYWIFNVY 457
           ++ C+  +   ++++ +++VP+P +RG     K S    + I EG  V ++V+     + 
Sbjct: 53  LKMCDIAEGQLLEITKLDLVPNPPKRGSKLVIKASGEIFETIEEGAYVDVEVRLGYIKLL 112

Query: 456 SETDDICTKTD--------CPATSD--FELSHSQTLPSITPPGSYTIQMKMLGKHDEELS 307
           ++T D+C   +        CP        LS    +P   PPG Y +  +     D+ ++
Sbjct: 113 TQTYDLCEILEDNDVDGLTCPIKKGKYDNLSKDVDIPQEVPPGKYLVTARAYTNDDDLIT 172

Query: 306 CIS 298
           CI+
Sbjct: 173 CIT 175

>NPC2_SCHPO (Q9C0X9) Phosphatidylglycerol/phosphatidylinositol transfer protein|
           precursor (PG/PI-TP)
          Length = 188

 Score = 45.1 bits (105), Expect = 2e-04
 Identities = 32/121 (26%), Positives = 49/121 (40%), Gaps = 15/121 (12%)
 Frame = -3

Query: 600 VKVSGVEIVPDPVERGVPATFKISASTDKNITEGKLV-IDVKYWIFNVYSETDDICTKT- 427
           V V  + ++P+P   G   T +   +    +  G  V I VKY    + +E  DIC K  
Sbjct: 63  VVVDYINLIPNPPAAGKNLTIETEINVGTTVLNGSYVDIQVKYGFVRIVNERLDICDKAY 122

Query: 426 -----DCPATSDFELSHSQ-TLPSITPPGSYTIQMKMLGKHDEELSCIS-------FGFS 286
                +CP         +  +LP   PPG Y +         E+L+C+S       FGF 
Sbjct: 123 ELAAVECPVEPGIITKQATISLPWAIPPGRYHVLATAYNADGEQLTCVSASVSFSHFGFQ 182

Query: 285 I 283
           +
Sbjct: 183 L 183

>NPC2_YEAST (Q12408) Phosphatidylglycerol/phosphatidylinositol transfer protein|
           precursor (PG/PI-TP) (NPC2 homolog)
          Length = 173

 Score = 42.4 bits (98), Expect = 0.001
 Identities = 24/111 (21%), Positives = 50/111 (45%), Gaps = 10/111 (9%)
 Frame = -3

Query: 600 VKVSGVEIVPDPVERGVPATFKISASTDKNITEGKLV-IDVKYWIFNVYSETDDICTKTD 424
           V++  V + P+P  RG   T   +    + I EG  + ++V+     + S+T D+C   +
Sbjct: 55  VEIKEVNLDPNPPVRGENLTISANGEVFETIEEGAYIDVEVRLGYIRLLSQTFDLCETLE 114

Query: 423 --------CPAT-SDFELSHSQTLPSITPPGSYTIQMKMLGKHDEELSCIS 298
                   CP    ++ +     +P   PPG Y +  +   + D+ ++C++
Sbjct: 115 DNDIEGLSCPIEPGEYNIKKIVEIPGEVPPGKYVVVARAYTEKDDLITCLT 165

>RPOA2_THEVO (Q979F5) DNA-directed RNA polymerase subunit A'' (EC 2.7.7.6)|
          Length = 508

 Score = 32.0 bits (71), Expect = 1.6
 Identities = 23/92 (25%), Positives = 39/92 (42%), Gaps = 7/92 (7%)
 Frame = -3

Query: 564 VERGVPATFKISASTDKNITEGKLVIDVKYWIFNV-------YSETDDICTKTDCPATSD 406
           + + VPA + +     K ITEG +  D K + ++V       YS   D+  K      S 
Sbjct: 14  LSKSVPAKYAVDFEVPKGITEGYVTSDKKRFTYHVSISSVAPYSNESDVIQKKKSGLKSI 73

Query: 405 FELSHSQTLPSITPPGSYTIQMKMLGKHDEEL 310
            E+   Q +  I+      ++ +  GK  +EL
Sbjct: 74  MEIEKIQKIEPIS-----IMEFRSSGKRIDEL 100

>SSS_SALOF (O81193) (+)-sabinene synthase, chloroplast precursor (EC 4.2.3.11)|
           (SSS)
          Length = 590

 Score = 31.6 bits (70), Expect = 2.1
 Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
 Frame = -3

Query: 564 VERG-VPATFKISASTDKNITEGKLVIDVKYWIFNVYSETDDICTKTDCPATSD 406
           +ERG VP   +   + D N +E + V  VK+ I   + E + + T +DCP T D
Sbjct: 496 LERGDVPKAIQCYMN-DTNASEREAVEHVKFLIREAWKEMNTVTTASDCPFTDD 548

>PGMP_BRANA (Q9SMM0) Phosphoglucomutase, chloroplast precursor (EC 5.4.2.2)|
           (Glucose phosphomutase) (PGM)
          Length = 629

 Score = 30.8 bits (68), Expect = 3.6
 Identities = 15/43 (34%), Positives = 21/43 (48%)
 Frame = -3

Query: 603 PVKVSGVEIVPDPVERGVPATFKISASTDKNITEGKLVIDVKY 475
           P+ V  +E  PD +  GVP         D N+T  K ++DV Y
Sbjct: 298 PIFVDNLEAKPDSISNGVPLEDFGHGHPDPNLTYAKDLVDVMY 340

>YOS2_SCHPO (Q9P7M1) Protein C21C3.02c in chromosome II|
          Length = 491

 Score = 29.6 bits (65), Expect = 8.0
 Identities = 15/41 (36%), Positives = 24/41 (58%)
 Frame = +3

Query: 57  ELMFSKTNIVSYFITPCSNS**ELLSRTESVAAPTSVTQKT 179
           +L+F K  I    +T  +    +LL++ +SV  PT +TQKT
Sbjct: 392 QLLFDKRRIRQALLTKIATKCFQLLNKQKSVHDPTYITQKT 432

>RPOB_LEPBI (Q9KK59) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (RNAP|
            beta subunit) (Transcriptase beta chain) (RNA polymerase
            beta subunit)
          Length = 1228

 Score = 29.6 bits (65), Expect = 8.0
 Identities = 24/74 (32%), Positives = 35/74 (47%), Gaps = 4/74 (5%)
 Frame = -3

Query: 591  SGVEIVPDPVERGVPATFKISA--STDKNITEGKLVIDVKYWIFNVYSETD--DICTKTD 424
            S V+IV +P+  GVP+   +     T       KL I+ +  +F+  SE D  D C K  
Sbjct: 1003 SPVDIVLNPL--GVPSRMNLGQIFETQLGFAAKKLGINFETPVFDGASEGDVNDFCKKAG 1060

Query: 423  CPATSDFELSHSQT 382
             P  S F+L   +T
Sbjct: 1061 LPENSKFQLYDGRT 1074


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 88,665,274
Number of Sequences: 219361
Number of extensions: 1819394
Number of successful extensions: 5078
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 4886
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5065
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6029593548
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)