Clone Information

BLAST Search Result

Clone Name	rbaal17d17
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	dbj\|AK068238.1\| Oryza sativa (japonica cultivar-group) cDNA clon...	135	2e-28
2	dbj\|AP008213.1\| Oryza sativa (japonica cultivar-group) genomic D...	98	4e-17
3	dbj\|AP004315.3\| Oryza sativa (japonica cultivar-group) genomic D...	98	4e-17
4	ref\|XM_476950.1\| Oryza sativa (japonica cultivar-group), mRNA	96	2e-16
5	dbj\|AP005179.4\| Oryza sativa (japonica cultivar-group) genomic D...	96	2e-16
6	dbj\|AP005877.3\| Oryza sativa (japonica cultivar-group) genomic D...	96	2e-16
7	dbj\|AK071758.1\| Oryza sativa (japonica cultivar-group) cDNA clon...	96	2e-16
8	ref\|XM_476949.1\| Oryza sativa (japonica cultivar-group), mRNA	80	9e-12
9	dbj\|AK099833.1\| Oryza sativa (japonica cultivar-group) cDNA clon...	80	9e-12
10	gb\|AY105419.1\| Zea mays PCO110580 mRNA sequence	78	4e-11
11	ref\|XM_470414.1\| Oryza sativa (japonica cultivar-group), mRNA	62	2e-06
12	gb\|DP000009.1\| Oryza sativa (japonica cultivar-group) chromosome 3	62	2e-06
13	dbj\|AP008209.1\| Oryza sativa (japonica cultivar-group) genomic D...	62	2e-06
14	gb\|AC096688.4\| Oryza sativa chromosome 3 BAC OSJNBa0015N08 genom...	62	2e-06
15	dbj\|AK101366.1\| Oryza sativa (japonica cultivar-group) cDNA clon...	62	2e-06
16	dbj\|AP008980.1\| Terrabacter sp. DBF63 plasmid pDBF1 genes, compl...	44	0.51
17	ref\|XM_550389.1\| Oryza sativa (japonica cultivar-group), mRNA	42	2.0
18	gb\|AC123800.4\| Mus musculus BAC clone RP24-343K18 from chromosom...	42	2.0
19	gb\|AY129335.1\| Mycobacteriophage Corndog, complete genome	42	2.0
20	dbj\|AP008207.1\| Oryza sativa (japonica cultivar-group) genomic D...	42	2.0
21	gb\|AC119736.7\| Homo sapiens 3 BAC RP11-196G10 (Roswell Park Canc...	42	2.0
22	dbj\|BA000035.2\| Corynebacterium efficiens YS-314 DNA, complete g...	42	2.0
23	dbj\|AP002524.2\| Oryza sativa (japonica cultivar-group) genomic D...	42	2.0
24	ref\|XM_560232.1\| Anopheles gambiae str. PEST ENSANGP00000026270 ...	42	2.0
25	emb\|AL646052.1\| Ralstonia solanacearum GMI1000 chromosome comple...	42	2.0
26	gb\|AC102914.9\| Mus musculus chromosome 15, clone RP24-274M4, com...	40	8.0
27	ref\|XM_472783.1\| Oryza sativa (japonica cultivar-group), predic...	40	8.0
28	ref\|XM_955580.1\| Neurospora crassa OR74A hypothetical protein (N...	40	8.0
29	ref\|XM_331340.1\| Neurospora crassa OR74A hypothetical protein (N...	40	8.0
30	emb\|AL772337.17\| Human DNA sequence from clone XXyac-21GA2 on ch...	40	8.0
31	gb\|CP000271.1\| Burkholderia xenovorans LB400 chromosome 2, compl...	40	8.0
32	gb\|CP000270.1\| Burkholderia xenovorans LB400 chromosome 1, compl...	40	8.0
33	gb\|CP000089.1\| Dechloromonas aromatica RCB, complete genome	40	8.0
34	emb\|BX294024.1\|NC20H10 Neurospora crassa DNA linkage group V Cos...	40	8.0
35	emb\|AL663017.3\|OSJN00149 Oryza sativa genomic DNA, chromosome 4,...	40	8.0
36	emb\|AL663065.9\| Mouse DNA sequence from clone RP23-248G11 on chr...	40	8.0
37	gb\|CP000240.1\| Synechococcus sp. JA-2-3B'a(2-13), complete genome	40	8.0
38	gb\|CP000249.1\| Frankia sp. CcI3, complete genome	40	8.0
39	dbj\|AP008210.1\| Oryza sativa (japonica cultivar-group) genomic D...	40	8.0
40	dbj\|AP008212.1\| Oryza sativa (japonica cultivar-group) genomic D...	40	8.0
41	dbj\|AP006048.3\| Oryza sativa (japonica cultivar-group) genomic D...	40	8.0
42	emb\|AJ234488.1\|HVU234488 Hordeum vulgare genomic DNA fragment; c...	40	8.0
43	ref\|XM_321355.2\| Anopheles gambiae str. PEST ENSANGP00000008498 ...	40	8.0
44	gb\|AY596297.1\| Haloarcula marismortui ATCC 43049 chromosome I, c...	40	8.0
45	dbj\|AK067594.1\| Oryza sativa (japonica cultivar-group) cDNA clon...	40	8.0
46	emb\|AJ937740.1\| Streptomyces ambofaciens ATCC 23877 left termina...	40	8.0
47	gb\|AE016825.1\| Chromobacterium violaceum ATCC 12472, complete ge...	40	8.0
48	emb\|AL606653.3\|OSJN00104 Oryza sativa genomic DNA, chromosome 4,...	40	8.0

>dbj|AK068238.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013149J12, full
           insert sequence
          Length = 863

 Score =  135 bits (68), Expect = 2e-28
 Identities = 184/220 (83%), Gaps = 2/220 (0%)
 Strand = Plus / Minus

                                                                       
Query: 161 ggaagcagtgcgcgggcgcctgccactggtcgtcgtcctccagcaccacgcccacctcga 220
           |||||||||| ||||||||||||||||||   |||||||||||   |||||| |||||||
Sbjct: 591 ggaagcagtgtgcgggcgcctgccactgggaatcgtcctccagggtcacgccgacctcga 532

                                                                       
Query: 221 agctcatcacgaactgctgtatccccgtcacgtcaaggaagttccagcggacggggcggc 280
           ||||||||||||| ||||||||||| |||  ||| ||||||||||||||||||||||| |
Sbjct: 531 agctcatcacgaattgctgtatccctgtcttgtcgaggaagttccagcggacggggcgcc 472

                                                                       
Query: 281 gcgtgagcg-cgtcctcgtagtagacgatgaagccagccttgccccagacgtggcagtcg 339
             ||| ||| | |||| ||||||||||| ||| ||   |||| |||| |||| ||| |||
Sbjct: 471 cggtg-gcgacctcctggtagtagacgacgaaccccagcttgtcccacacgtcgcactcg 413

                                                   
Query: 340 atcccgccggtggtctcgcggccgaggtaggcggcgccgc 379
           ||||||||||||  |   |||||||||||| || ||||||
Sbjct: 412 atcccgccggtgcgccaccggccgaggtagacgacgccgc 373



 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 104/121 (85%), Gaps = 6/121 (4%)
 Strand = Plus / Minus

                                                                       
Query: 438 gtcgaagtagaaggtggtgccattattccactccacgtcgtacagcgggtcgcc-----c 492
           ||||||||||||||||||||| || | |||||| |||||||| ||||||||| |     |
Sbjct: 305 gtcgaagtagaaggtggtgccgttgtcccactcgacgtcgtagagcgggtcgtcggcggc 246

                                                                       
Query: 493 gac-agctggtgccggatcaggttcaggttgcgccgccgcggccagtcgtagtagaggtc 551
           | | |||||||  ||||||||||| |||||||||||||||| ||||||||||||||||||
Sbjct: 245 ggcgagctggtagcggatcaggttgaggttgcgccgccgcgaccagtcgtagtagaggtc 186

            
Query: 552 g 552
           |
Sbjct: 185 g 185

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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 76/85 (89%)
 Strand = Plus / Minus

                                                                            
Query: 161      ggaagcagtgcgcgggcgcctgccactggtcgtcgtcctccagcaccacgcccacctcga 220
                |||||||||| ||||||||||||||||||   |||||||||||   |||||| |||||||
Sbjct: 17090761 ggaagcagtgtgcgggcgcctgccactgggaatcgtcctccagggtcacgccgacctcga 17090702

                                         
Query: 221      agctcatcacgaactgctgtatccc 245
                ||||||||||||| |||||||||||
Sbjct: 17090701 agctcatcacgaattgctgtatccc 17090677



 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 104/121 (85%), Gaps = 6/121 (4%)
 Strand = Plus / Minus

                                                                            
Query: 438      gtcgaagtagaaggtggtgccattattccactccacgtcgtacagcgggtcgcc-----c 492
                ||||||||||||||||||||| || | |||||| |||||||| ||||||||| |     |
Sbjct: 17082891 gtcgaagtagaaggtggtgccgttgtcccactcgacgtcgtagagcgggtcgtcggcggc 17082832

                                                                            
Query: 493      gac-agctggtgccggatcaggttcaggttgcgccgccgcggccagtcgtagtagaggtc 551
                | | |||||||  ||||||||||| |||||||||||||||| ||||||||||||||||||
Sbjct: 17082831 ggcgagctggtagcggatcaggttgaggttgcgccgccgcgaccagtcgtagtagaggtc 17082772

                 
Query: 552      g 552
                |
Sbjct: 17082771 g 17082771



 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 236/298 (79%), Gaps = 3/298 (1%)
 Strand = Plus / Plus

                                                                           
Query: 258     gaagttccagcggacggggcggcgcgtgagcgcgtcctcgtagtagacgatgaagccagc 317
               |||||||||||||||||||||| | ||||   |||||||||||||   ||||||| |  |
Sbjct: 4808221 gaagttccagcggacggggcggtgggtgacgacgtcctcgtagtaccagatgaagtcgac 4808280

                                                                           
Query: 318     cttgccccagacgtggcagtcgatcccgccggtggtctcgcggccgaggtaggcggcgc- 376
               ||||  |||||||||||||||||  ||| |   || ||||||||||||||||||||||| 
Sbjct: 4808281 cttggtccagacgtggcagtcgaagccgtcaacggcctcgcggccgaggtaggcggcgcc 4808340

                                                                           
Query: 377     --cgctgagccacccaggggggagcacgccgacggcgacctgcagcgtgcggcacgtcgc 434
                 ||  ||||||  | ||||| || | |||||||| || | |||  |||||||| |  ||
Sbjct: 4808341 ggcggcgagccagtcggggggcaggatgccgacggggaacagcaaggtgcggcaggaggc 4808400

                                                                           
Query: 435     cgtgtcgaagtagaaggtggtgccattattccactccacgtcgtacagcgggtcgcccga 494
                | |||||||||| ||| |||||| ||  ||||||| |||||||| | ||||||||| ||
Sbjct: 4808401 ggagtcgaagtagtaggaggtgccgttggtccactcgacgtcgtagaccgggtcgccgga 4808460

                                                                         
Query: 495     cagctggtgccggatcaggttcaggttgcgccgccgcggccagtcgtagtagaggtcg 552
                ||||||     ||  ||||| |||||||||| ||  |||||||||||||||||||||
Sbjct: 4808461 gagctggccggcgacgaggttgaggttgcgccccccaggccagtcgtagtagaggtcg 4808518



 Score = 79.8 bits (40), Expect = 9e-12
 Identities = 85/100 (85%)
 Strand = Plus / Minus

                                                                           
Query: 453     ggtgccattattccactccacgtcgtacagcgggtcgcccgacagctggtgccggatcag 512
               |||||||||  ||||||| ||||||||   ||||||||| || ||||||   ||||| ||
Sbjct: 4805507 ggtgccattggtccactcgacgtcgtaggtcgggtcgccggagagctggccgcggatgag 4805448

                                                       
Query: 513     gttcaggttgcgccgccgcggccagtcgtagtagaggtcg 552
               ||| |||||||||| ||||||||||||||| |||||||||
Sbjct: 4805447 gttgaggttgcgcccccgcggccagtcgtaatagaggtcg 4805408



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 98/121 (80%)
 Strand = Plus / Minus

                                                                           
Query: 258     gaagttccagcggacggggcggcgcgtgagcgcgtcctcgtagtagacgatgaagccagc 317
               |||||||||||| ||||||||| | ||||   |||||||||||||   || || | |  |
Sbjct: 4805705 gaagttccagcgaacggggcggtgggtgacgacgtcctcgtagtaccagacgatgtcgac 4805646

                                                                           
Query: 318     cttgccccagacgtggcagtcgatcccgccggtggtctcgcggccgaggtaggcggcgcc 377
               ||||  ||||| |||||||||||  ||| ||  ||||||||||||||||||| |||||||
Sbjct: 4805645 cttggtccagaggtggcagtcgaagccggcgacggtctcgcggccgaggtagacggcgcc 4805586

                
Query: 378     g 378
               |
Sbjct: 4805585 g 4805585



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 102/125 (81%), Gaps = 2/125 (1%)
 Strand = Plus / Minus

                                                                            
Query: 256      aggaagttccagcggacggggcggcgcgtgagcg-cgtcctcgtagtagacgatgaagcc 314
                ||||||||||||||||||||||| |  ||| ||| | |||| ||||||||||| ||| ||
Sbjct: 17083082 aggaagttccagcggacggggcgcccggtg-gcgacctcctggtagtagacgacgaaccc 17083024

                                                                            
Query: 315      agccttgccccagacgtggcagtcgatcccgccggtggtctcgcggccgaggtaggcggc 374
                   |||| |||| |||| ||| |||||||||||||||  |   |||||||||||| || |
Sbjct: 17083023 cagcttgtcccacacgtcgcactcgatcccgccggtgcgccaccggccgaggtagacgac 17082964

                     
Query: 375      gccgc 379
                |||||
Sbjct: 17082963 gccgc 17082959



 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 211     cccacctcgaagctcatcac 230
               ||||||||||||||||||||
Sbjct: 4806206 cccacctcgaagctcatcac 4806187

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>dbj|AP004315.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0571D04
          Length = 149302

 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 76/85 (89%)
 Strand = Plus / Minus

                                                                         
Query: 161   ggaagcagtgcgcgggcgcctgccactggtcgtcgtcctccagcaccacgcccacctcga 220
             |||||||||| ||||||||||||||||||   |||||||||||   |||||| |||||||
Sbjct: 43887 ggaagcagtgtgcgggcgcctgccactgggaatcgtcctccagggtcacgccgacctcga 43828

                                      
Query: 221   agctcatcacgaactgctgtatccc 245
             ||||||||||||| |||||||||||
Sbjct: 43827 agctcatcacgaattgctgtatccc 43803



 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 104/121 (85%), Gaps = 6/121 (4%)
 Strand = Plus / Minus

                                                                         
Query: 438   gtcgaagtagaaggtggtgccattattccactccacgtcgtacagcgggtcgcc-----c 492
             ||||||||||||||||||||| || | |||||| |||||||| ||||||||| |     |
Sbjct: 36017 gtcgaagtagaaggtggtgccgttgtcccactcgacgtcgtagagcgggtcgtcggcggc 35958

                                                                         
Query: 493   gac-agctggtgccggatcaggttcaggttgcgccgccgcggccagtcgtagtagaggtc 551
             | | |||||||  ||||||||||| |||||||||||||||| ||||||||||||||||||
Sbjct: 35957 ggcgagctggtagcggatcaggttgaggttgcgccgccgcgaccagtcgtagtagaggtc 35898

              
Query: 552   g 552
             |
Sbjct: 35897 g 35897



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 102/125 (81%), Gaps = 2/125 (1%)
 Strand = Plus / Minus

                                                                         
Query: 256   aggaagttccagcggacggggcggcgcgtgagcg-cgtcctcgtagtagacgatgaagcc 314
             ||||||||||||||||||||||| |  ||| ||| | |||| ||||||||||| ||| ||
Sbjct: 36208 aggaagttccagcggacggggcgcccggtg-gcgacctcctggtagtagacgacgaaccc 36150

                                                                         
Query: 315   agccttgccccagacgtggcagtcgatcccgccggtggtctcgcggccgaggtaggcggc 374
                |||| |||| |||| ||| |||||||||||||||  |   |||||||||||| || |
Sbjct: 36149 cagcttgtcccacacgtcgcactcgatcccgccggtgcgccaccggccgaggtagacgac 36090

                  
Query: 375   gccgc 379
             |||||
Sbjct: 36089 gccgc 36085

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>ref|XM_476950.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1279

 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 236/298 (79%), Gaps = 3/298 (1%)
 Strand = Plus / Minus

                                                                       
Query: 258 gaagttccagcggacggggcggcgcgtgagcgcgtcctcgtagtagacgatgaagccagc 317
           |||||||||||||||||||||| | ||||   |||||||||||||   ||||||| |  |
Sbjct: 544 gaagttccagcggacggggcggtgggtgacgacgtcctcgtagtaccagatgaagtcgac 485

                                                                       
Query: 318 cttgccccagacgtggcagtcgatcccgccggtggtctcgcggccgaggtaggcggcgc- 376
           ||||  |||||||||||||||||  ||| |   || ||||||||||||||||||||||| 
Sbjct: 484 cttggtccagacgtggcagtcgaagccgtcaacggcctcgcggccgaggtaggcggcgcc 425

                                                                       
Query: 377 --cgctgagccacccaggggggagcacgccgacggcgacctgcagcgtgcggcacgtcgc 434
             ||  ||||||  | ||||| || | |||||||| || | |||  |||||||| |  ||
Sbjct: 424 ggcggcgagccagtcggggggcaggatgccgacggggaacagcaaggtgcggcaggaggc 365

                                                                       
Query: 435 cgtgtcgaagtagaaggtggtgccattattccactccacgtcgtacagcgggtcgcccga 494
            | |||||||||| ||| |||||| ||  ||||||| |||||||| | ||||||||| ||
Sbjct: 364 ggagtcgaagtagtaggaggtgccgttggtccactcgacgtcgtagaccgggtcgccgga 305

                                                                     
Query: 495 cagctggtgccggatcaggttcaggttgcgccgccgcggccagtcgtagtagaggtcg 552
            ||||||     ||  ||||| |||||||||| ||  |||||||||||||||||||||
Sbjct: 304 gagctggccggcgacgaggttgaggttgcgccccccaggccagtcgtagtagaggtcg 247

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>dbj|AP005179.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:OSJNBb0084L07
          Length = 127992

 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 236/298 (79%), Gaps = 3/298 (1%)
 Strand = Plus / Plus

                                                                          
Query: 258    gaagttccagcggacggggcggcgcgtgagcgcgtcctcgtagtagacgatgaagccagc 317
              |||||||||||||||||||||| | ||||   |||||||||||||   ||||||| |  |
Sbjct: 126131 gaagttccagcggacggggcggtgggtgacgacgtcctcgtagtaccagatgaagtcgac 126190

                                                                          
Query: 318    cttgccccagacgtggcagtcgatcccgccggtggtctcgcggccgaggtaggcggcgc- 376
              ||||  |||||||||||||||||  ||| |   || ||||||||||||||||||||||| 
Sbjct: 126191 cttggtccagacgtggcagtcgaagccgtcaacggcctcgcggccgaggtaggcggcgcc 126250

                                                                          
Query: 377    --cgctgagccacccaggggggagcacgccgacggcgacctgcagcgtgcggcacgtcgc 434
                ||  ||||||  | ||||| || | |||||||| || | |||  |||||||| |  ||
Sbjct: 126251 ggcggcgagccagtcggggggcaggatgccgacggggaacagcaaggtgcggcaggaggc 126310

                                                                          
Query: 435    cgtgtcgaagtagaaggtggtgccattattccactccacgtcgtacagcgggtcgcccga 494
               | |||||||||| ||| |||||| ||  ||||||| |||||||| | ||||||||| ||
Sbjct: 126311 ggagtcgaagtagtaggaggtgccgttggtccactcgacgtcgtagaccgggtcgccgga 126370

                                                                        
Query: 495    cagctggtgccggatcaggttcaggttgcgccgccgcggccagtcgtagtagaggtcg 552
               ||||||     ||  ||||| |||||||||| ||  |||||||||||||||||||||
Sbjct: 126371 gagctggccggcgacgaggttgaggttgcgccccccaggccagtcgtagtagaggtcg 126428



 Score = 79.8 bits (40), Expect = 9e-12
 Identities = 85/100 (85%)
 Strand = Plus / Minus

                                                                          
Query: 453    ggtgccattattccactccacgtcgtacagcgggtcgcccgacagctggtgccggatcag 512
              |||||||||  ||||||| ||||||||   ||||||||| || ||||||   ||||| ||
Sbjct: 123417 ggtgccattggtccactcgacgtcgtaggtcgggtcgccggagagctggccgcggatgag 123358

                                                      
Query: 513    gttcaggttgcgccgccgcggccagtcgtagtagaggtcg 552
              ||| |||||||||| ||||||||||||||| |||||||||
Sbjct: 123357 gttgaggttgcgcccccgcggccagtcgtaatagaggtcg 123318



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 98/121 (80%)
 Strand = Plus / Minus

                                                                          
Query: 258    gaagttccagcggacggggcggcgcgtgagcgcgtcctcgtagtagacgatgaagccagc 317
              |||||||||||| ||||||||| | ||||   |||||||||||||   || || | |  |
Sbjct: 123615 gaagttccagcgaacggggcggtgggtgacgacgtcctcgtagtaccagacgatgtcgac 123556

                                                                          
Query: 318    cttgccccagacgtggcagtcgatcccgccggtggtctcgcggccgaggtaggcggcgcc 377
              ||||  ||||| |||||||||||  ||| ||  ||||||||||||||||||| |||||||
Sbjct: 123555 cttggtccagaggtggcagtcgaagccggcgacggtctcgcggccgaggtagacggcgcc 123496

               
Query: 378    g 378
              |
Sbjct: 123495 g 123495



 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 211    cccacctcgaagctcatcac 230
              ||||||||||||||||||||
Sbjct: 124116 cccacctcgaagctcatcac 124097

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>dbj|AP005877.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBb0002L09
          Length = 146343

 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 236/298 (79%), Gaps = 3/298 (1%)
 Strand = Plus / Plus

                                                                         
Query: 258   gaagttccagcggacggggcggcgcgtgagcgcgtcctcgtagtagacgatgaagccagc 317
             |||||||||||||||||||||| | ||||   |||||||||||||   ||||||| |  |
Sbjct: 82734 gaagttccagcggacggggcggtgggtgacgacgtcctcgtagtaccagatgaagtcgac 82793

                                                                         
Query: 318   cttgccccagacgtggcagtcgatcccgccggtggtctcgcggccgaggtaggcggcgc- 376
             ||||  |||||||||||||||||  ||| |   || ||||||||||||||||||||||| 
Sbjct: 82794 cttggtccagacgtggcagtcgaagccgtcaacggcctcgcggccgaggtaggcggcgcc 82853

                                                                         
Query: 377   --cgctgagccacccaggggggagcacgccgacggcgacctgcagcgtgcggcacgtcgc 434
               ||  ||||||  | ||||| || | |||||||| || | |||  |||||||| |  ||
Sbjct: 82854 ggcggcgagccagtcggggggcaggatgccgacggggaacagcaaggtgcggcaggaggc 82913

                                                                         
Query: 435   cgtgtcgaagtagaaggtggtgccattattccactccacgtcgtacagcgggtcgcccga 494
              | |||||||||| ||| |||||| ||  ||||||| |||||||| | ||||||||| ||
Sbjct: 82914 ggagtcgaagtagtaggaggtgccgttggtccactcgacgtcgtagaccgggtcgccgga 82973

                                                                       
Query: 495   cagctggtgccggatcaggttcaggttgcgccgccgcggccagtcgtagtagaggtcg 552
              ||||||     ||  ||||| |||||||||| ||  |||||||||||||||||||||
Sbjct: 82974 gagctggccggcgacgaggttgaggttgcgccccccaggccagtcgtagtagaggtcg 83031



 Score = 79.8 bits (40), Expect = 9e-12
 Identities = 85/100 (85%)
 Strand = Plus / Minus

                                                                         
Query: 453   ggtgccattattccactccacgtcgtacagcgggtcgcccgacagctggtgccggatcag 512
             |||||||||  ||||||| ||||||||   ||||||||| || ||||||   ||||| ||
Sbjct: 80020 ggtgccattggtccactcgacgtcgtaggtcgggtcgccggagagctggccgcggatgag 79961

                                                     
Query: 513   gttcaggttgcgccgccgcggccagtcgtagtagaggtcg 552
             ||| |||||||||| ||||||||||||||| |||||||||
Sbjct: 79960 gttgaggttgcgcccccgcggccagtcgtaatagaggtcg 79921



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 98/121 (80%)
 Strand = Plus / Minus

                                                                         
Query: 258   gaagttccagcggacggggcggcgcgtgagcgcgtcctcgtagtagacgatgaagccagc 317
             |||||||||||| ||||||||| | ||||   |||||||||||||   || || | |  |
Sbjct: 80218 gaagttccagcgaacggggcggtgggtgacgacgtcctcgtagtaccagacgatgtcgac 80159

                                                                         
Query: 318   cttgccccagacgtggcagtcgatcccgccggtggtctcgcggccgaggtaggcggcgcc 377
             ||||  ||||| |||||||||||  ||| ||  ||||||||||||||||||| |||||||
Sbjct: 80158 cttggtccagaggtggcagtcgaagccggcgacggtctcgcggccgaggtagacggcgcc 80099

              
Query: 378   g 378
             |
Sbjct: 80098 g 80098



 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 211   cccacctcgaagctcatcac 230
             ||||||||||||||||||||
Sbjct: 80719 cccacctcgaagctcatcac 80700

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>dbj|AK071758.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023112J01, full
           insert sequence
          Length = 1279

 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 236/298 (79%), Gaps = 3/298 (1%)
 Strand = Plus / Minus

                                                                       
Query: 258 gaagttccagcggacggggcggcgcgtgagcgcgtcctcgtagtagacgatgaagccagc 317
           |||||||||||||||||||||| | ||||   |||||||||||||   ||||||| |  |
Sbjct: 544 gaagttccagcggacggggcggtgggtgacgacgtcctcgtagtaccagatgaagtcgac 485

                                                                       
Query: 318 cttgccccagacgtggcagtcgatcccgccggtggtctcgcggccgaggtaggcggcgc- 376
           ||||  |||||||||||||||||  ||| |   || ||||||||||||||||||||||| 
Sbjct: 484 cttggtccagacgtggcagtcgaagccgtcaacggcctcgcggccgaggtaggcggcgcc 425

                                                                       
Query: 377 --cgctgagccacccaggggggagcacgccgacggcgacctgcagcgtgcggcacgtcgc 434
             ||  ||||||  | ||||| || | |||||||| || | |||  |||||||| |  ||
Sbjct: 424 ggcggcgagccagtcggggggcaggatgccgacggggaacagcaaggtgcggcaggaggc 365

                                                                       
Query: 435 cgtgtcgaagtagaaggtggtgccattattccactccacgtcgtacagcgggtcgcccga 494
            | |||||||||| ||| |||||| ||  ||||||| |||||||| | ||||||||| ||
Sbjct: 364 ggagtcgaagtagtaggaggtgccgttggtccactcgacgtcgtagaccgggtcgccgga 305

                                                                     
Query: 495 cagctggtgccggatcaggttcaggttgcgccgccgcggccagtcgtagtagaggtcg 552
            ||||||     ||  ||||| |||||||||| ||  |||||||||||||||||||||
Sbjct: 304 gagctggccggcgacgaggttgaggttgcgccccccaggccagtcgtagtagaggtcg 247

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>ref|XM_476949.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 869

 Score = 79.8 bits (40), Expect = 9e-12
 Identities = 85/100 (85%)
 Strand = Plus / Minus

                                                                       
Query: 453 ggtgccattattccactccacgtcgtacagcgggtcgcccgacagctggtgccggatcag 512
           |||||||||  ||||||| ||||||||   ||||||||| || ||||||   ||||| ||
Sbjct: 298 ggtgccattggtccactcgacgtcgtaggtcgggtcgccggagagctggccgcggatgag 239

                                                   
Query: 513 gttcaggttgcgccgccgcggccagtcgtagtagaggtcg 552
           ||| |||||||||| ||||||||||||||| |||||||||
Sbjct: 238 gttgaggttgcgcccccgcggccagtcgtaatagaggtcg 199



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 98/121 (80%)
 Strand = Plus / Minus

                                                                       
Query: 258 gaagttccagcggacggggcggcgcgtgagcgcgtcctcgtagtagacgatgaagccagc 317
           |||||||||||| ||||||||| | ||||   |||||||||||||   || || | |  |
Sbjct: 496 gaagttccagcgaacggggcggtgggtgacgacgtcctcgtagtaccagacgatgtcgac 437

                                                                       
Query: 318 cttgccccagacgtggcagtcgatcccgccggtggtctcgcggccgaggtaggcggcgcc 377
           ||||  ||||| |||||||||||  ||| ||  ||||||||||||||||||| |||||||
Sbjct: 436 cttggtccagaggtggcagtcgaagccggcgacggtctcgcggccgaggtagacggcgcc 377

            
Query: 378 g 378
           |
Sbjct: 376 g 376



 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 211 cccacctcgaagctcatcac 230
           ||||||||||||||||||||
Sbjct: 537 cccacctcgaagctcatcac 518

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>dbj|AK099833.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013106C07, full
           insert sequence
          Length = 869

 Score = 79.8 bits (40), Expect = 9e-12
 Identities = 85/100 (85%)
 Strand = Plus / Minus

                                                                       
Query: 453 ggtgccattattccactccacgtcgtacagcgggtcgcccgacagctggtgccggatcag 512
           |||||||||  ||||||| ||||||||   ||||||||| || ||||||   ||||| ||
Sbjct: 298 ggtgccattggtccactcgacgtcgtaggtcgggtcgccggagagctggccgcggatgag 239

                                                   
Query: 513 gttcaggttgcgccgccgcggccagtcgtagtagaggtcg 552
           ||| |||||||||| ||||||||||||||| |||||||||
Sbjct: 238 gttgaggttgcgcccccgcggccagtcgtaatagaggtcg 199



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 48/55 (87%)
 Strand = Plus / Minus

                                                                  
Query: 324 ccagacgtggcagtcgatcccgccggtggtctcgcggccgaggtaggcggcgccg 378
           ||||| |||||||||||  ||| ||  ||||||||||||||||||| ||||||||
Sbjct: 430 ccagaggtggcagtcgaagccggcgacggtctcgcggccgaggtagacggcgccg 376



 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 211 cccacctcgaagctcatcac 230
           ||||||||||||||||||||
Sbjct: 537 cccacctcgaagctcatcac 518

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>gb|AY105419.1| Zea mays PCO110580 mRNA sequence
          Length = 1045

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 96/115 (83%)
 Strand = Plus / Minus

                                                                       
Query: 438 gtcgaagtagaaggtggtgccattattccactccacgtcgtacagcgggtcgcccgacag 497
           ||||||| || ||| |||||| ||  ||||||| |||||||| ||||||||||  || ||
Sbjct: 383 gtcgaagaagtaggaggtgccgttggtccactcgacgtcgtagagcgggtcgctggagag 324

                                                                  
Query: 498 ctggtgccggatcaggttcaggttgcgccgccgcggccagtcgtagtagaggtcg 552
           ||||| |||||| ||||| |||||||| | ||  |||||||||||||| ||||||
Sbjct: 323 ctggtcccggatgaggttgaggttgcggcccctgggccagtcgtagtacaggtcg 269

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>ref|XM_470414.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 846

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 67/79 (84%)
 Strand = Plus / Minus

                                                                       
Query: 291 gtcctcgtagtagacgatgaagccagccttgccccagacgtggcagtcgatcccgccggt 350
           |||||||||||||  ||||||| | |||||| ||||||||||||||||||  ||| ||| 
Sbjct: 426 gtcctcgtagtaggtgatgaagtcggccttggcccagacgtggcagtcgaagccgtcggc 367

                              
Query: 351 ggtctcgcggccgaggtag 369
           ||  | |||||||||||||
Sbjct: 366 ggggtggcggccgaggtag 348

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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 67/79 (84%)
 Strand = Plus / Plus

                                                                            
Query: 291      gtcctcgtagtagacgatgaagccagccttgccccagacgtggcagtcgatcccgccggt 350
                |||||||||||||  ||||||| | |||||| ||||||||||||||||||  ||| ||| 
Sbjct: 35515240 gtcctcgtagtaggtgatgaagtcggccttggcccagacgtggcagtcgaagccgtcggc 35515299

                                   
Query: 351      ggtctcgcggccgaggtag 369
                ||  | |||||||||||||
Sbjct: 35515300 ggggtggcggccgaggtag 35515318

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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 67/79 (84%)
 Strand = Plus / Plus

                                                                            
Query: 291      gtcctcgtagtagacgatgaagccagccttgccccagacgtggcagtcgatcccgccggt 350
                |||||||||||||  ||||||| | |||||| ||||||||||||||||||  ||| ||| 
Sbjct: 35605312 gtcctcgtagtaggtgatgaagtcggccttggcccagacgtggcagtcgaagccgtcggc 35605371

                                   
Query: 351      ggtctcgcggccgaggtag 369
                ||  | |||||||||||||
Sbjct: 35605372 ggggtggcggccgaggtag 35605390

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>gb|AC096688.4| Oryza sativa chromosome 3 BAC OSJNBa0015N08 genomic sequence, complete
             sequence
          Length = 145290

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 67/79 (84%)
 Strand = Plus / Plus

                                                                         
Query: 291   gtcctcgtagtagacgatgaagccagccttgccccagacgtggcagtcgatcccgccggt 350
             |||||||||||||  ||||||| | |||||| ||||||||||||||||||  ||| ||| 
Sbjct: 48203 gtcctcgtagtaggtgatgaagtcggccttggcccagacgtggcagtcgaagccgtcggc 48262

                                
Query: 351   ggtctcgcggccgaggtag 369
             ||  | |||||||||||||
Sbjct: 48263 ggggtggcggccgaggtag 48281

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>dbj|AK101366.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033035L04, full
           insert sequence
          Length = 916

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 67/79 (84%)
 Strand = Plus / Minus

                                                                       
Query: 291 gtcctcgtagtagacgatgaagccagccttgccccagacgtggcagtcgatcccgccggt 350
           |||||||||||||  ||||||| | |||||| ||||||||||||||||||  ||| ||| 
Sbjct: 438 gtcctcgtagtaggtgatgaagtcggccttggcccagacgtggcagtcgaagccgtcggc 379

                              
Query: 351 ggtctcgcggccgaggtag 369
           ||  | |||||||||||||
Sbjct: 378 ggggtggcggccgaggtag 360

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>dbj|AP008980.1| Terrabacter sp. DBF63 plasmid pDBF1 genes, complete and partial cds
          Length = 70631

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 273   ggggcggcgcgtgagcgcgtcc 294
             ||||||||||||||||||||||
Sbjct: 25890 ggggcggcgcgtgagcgcgtcc 25869

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>ref|XM_550389.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1455

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 546 gaggtcgtgcagccggagcggcggg 570
           ||||||| |||||||||||||||||
Sbjct: 600 gaggtcgcgcagccggagcggcggg 576

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>gb|AC123800.4| Mus musculus BAC clone RP24-343K18 from chromosome 1, complete sequence
          Length = 177367

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 16     gaaaacacacaccacatattcacat 40
              ||||||||||||||||||| |||||
Sbjct: 102084 gaaaacacacaccacatatacacat 102060

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>gb|AY129335.1| Mycobacteriophage Corndog, complete genome
          Length = 69777

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 191   cgtcgtcctccagcaccacgc 211
             |||||||||||||||||||||
Sbjct: 19099 cgtcgtcctccagcaccacgc 19079

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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 546     gaggtcgtgcagccggagcggcggg 570
               ||||||| |||||||||||||||||
Sbjct: 4153044 gaggtcgcgcagccggagcggcggg 4153068

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>gb|AC119736.7| Homo sapiens 3 BAC RP11-196G10 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 160075

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 27    ccacatattcacattcagtca 47
             |||||||||||||||||||||
Sbjct: 14574 ccacatattcacattcagtca 14554

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>dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete genome
          Length = 3147090

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 331    tggcagtcgatcccgccggtg 351
              |||||||||||||||||||||
Sbjct: 156107 tggcagtcgatcccgccggtg 156127

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>dbj|AP002524.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0406H10
          Length = 156419

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 546    gaggtcgtgcagccggagcggcggg 570
              ||||||| |||||||||||||||||
Sbjct: 100015 gaggtcgcgcagccggagcggcggg 100039

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>ref|XM_560232.1| Anopheles gambiae str. PEST ENSANGP00000026270
           (ENSANGG00000023006), partial mRNA
          Length = 1290

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 364 aggtaggcggcgccgctgagc 384
           |||||||||||||||||||||
Sbjct: 986 aggtaggcggcgccgctgagc 966

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>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence
          Length = 3716413

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 499     tggtgccggatcaggttcagg 519
               |||||||||||||||||||||
Sbjct: 2848906 tggtgccggatcaggttcagg 2848926

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>gb|AC102914.9| Mus musculus chromosome 15, clone RP24-274M4, complete sequence
          Length = 185807

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 51    tcagtaggcggcggcagctc 70
             ||||||||||||||||||||
Sbjct: 46177 tcagtaggcggcggcagctc 46158

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>ref|XM_472783.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1323

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 272 cggggcggcgcgtgagcgcg 291
           ||||||||||||||||||||
Sbjct: 424 cggggcggcgcgtgagcgcg 405

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>ref|XM_955580.1| Neurospora crassa OR74A hypothetical protein (NCU08949.1) partial
           mRNA
          Length = 516

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 360 gccgaggtaggcggcgccgc 379
           ||||||||||||||||||||
Sbjct: 348 gccgaggtaggcggcgccgc 329

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>ref|XM_331340.1| Neurospora crassa OR74A hypothetical protein (NCU08949.1) partial
           mRNA
          Length = 516

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 360 gccgaggtaggcggcgccgc 379
           ||||||||||||||||||||
Sbjct: 348 gccgaggtaggcggcgccgc 329

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>emb|AL772337.17| Human DNA sequence from clone XXyac-21GA2 on chromosome 9 Contains a
             pseudogene similar to part of E74-like factor 2 (ets
             domain transcription factor) (EU32, NERF, NERF-2,
             NERF-1A,NERF-1B) (ELF2), a cathepsin L (MEP, CATL) (CTSL)
             pseudogene, a pseudogene similar to part of a
             fructose-1,6-bisphosphatase protein, two novel genes, a
             novel gene (FLJ35866) and a CpG island, complete sequence
          Length = 95932

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 20    acacacaccacatattcacattca 43
             ||||||||||||||| ||||||||
Sbjct: 61984 acacacaccacatatacacattca 62007

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>gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, complete sequence
          Length = 3363523

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 416     gcagcgtgcggcacgtcgcc 435
               ||||||||||||||||||||
Sbjct: 2513854 gcagcgtgcggcacgtcgcc 2513873

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>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence
          Length = 4895836

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 360     gccgaggtaggcggcgccgc 379
               ||||||||||||||||||||
Sbjct: 2545718 gccgaggtaggcggcgccgc 2545737

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>gb|CP000089.1| Dechloromonas aromatica RCB, complete genome
          Length = 4501104

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 505     cggatcaggttcaggttgcg 524
               ||||||||||||||||||||
Sbjct: 4416650 cggatcaggttcaggttgcg 4416669

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>emb|BX294024.1|NC20H10 Neurospora crassa DNA linkage group V Cosmid contig 20H10
          Length = 96283

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 360   gccgaggtaggcggcgccgc 379
             ||||||||||||||||||||
Sbjct: 80962 gccgaggtaggcggcgccgc 80943

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>emb|AL663017.3|OSJN00149 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0060P14,
             complete sequence
          Length = 139418

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 272   cggggcggcgcgtgagcgcg 291
             ||||||||||||||||||||
Sbjct: 86339 cggggcggcgcgtgagcgcg 86358

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>emb|AL663065.9| Mouse DNA sequence from clone RP23-248G11 on chromosome 11 Contains a
             heterogeneous nuclear ribonucleoprotein pseudogene and a
             CpG island, complete sequence
          Length = 210386

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 310   aagccagccttgccccagac 329
             ||||||||||||||||||||
Sbjct: 17855 aagccagccttgccccagac 17836

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>gb|CP000240.1| Synechococcus sp. JA-2-3B'a(2-13), complete genome
          Length = 3046682

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 371    cggcgccgctgagccacccagggg 394
              |||||| |||||||||||||||||
Sbjct: 804815 cggcgcagctgagccacccagggg 804792

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>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 397     agcacgccgacggcgacctgcagc 420
               |||||||||||||||||| |||||
Sbjct: 2812580 agcacgccgacggcgaccagcagc 2812557

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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 272      cggggcggcgcgtgagcgcg 291
                ||||||||||||||||||||
Sbjct: 23196147 cggggcggcgcgtgagcgcg 23196166

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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 48       tgatcagtaggcggcggcag 67
                ||||||||||||||||||||
Sbjct: 16976002 tgatcagtaggcggcggcag 16975983

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>dbj|AP006048.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
              clone:B1423D04
          Length = 154474

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 48     tgatcagtaggcggcggcag 67
              ||||||||||||||||||||
Sbjct: 109024 tgatcagtaggcggcggcag 109005

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>emb|AJ234488.1|HVU234488 Hordeum vulgare genomic DNA fragment; clone MWG0528.rev
          Length = 234

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 200 ccagcaccacgcccacctcg 219
           ||||||||||||||||||||
Sbjct: 96  ccagcaccacgcccacctcg 77

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>ref|XM_321355.2| Anopheles gambiae str. PEST ENSANGP00000008498
           (ENSANGG00000006399), partial mRNA
          Length = 3952

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 557 gccggagcggcgggcccgtcgacg 580
           ||||||||||||||| ||||||||
Sbjct: 754 gccggagcggcgggcacgtcgacg 777

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>gb|AY596297.1| Haloarcula marismortui ATCC 43049 chromosome I, complete sequence
          Length = 3131724

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 539    cgtagtagaggtcgtgcagc 558
              ||||||||||||||||||||
Sbjct: 282407 cgtagtagaggtcgtgcagc 282426

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>dbj|AK067594.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013109D22,
          full insert sequence
          Length = 1853

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 48 tgatcagtaggcggcggcag 67
          ||||||||||||||||||||
Sbjct: 74 tgatcagtaggcggcggcag 55

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>emb|AJ937740.1| Streptomyces ambofaciens ATCC 23877 left terminal inverted repeat
          Length = 273746

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 197    cctccagcaccacgcccacc 216
              ||||||||||||||||||||
Sbjct: 259918 cctccagcaccacgcccacc 259899

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>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome
          Length = 4751080

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 419     gcgtgcggcacgtcgccgtg 438
               ||||||||||||||||||||
Sbjct: 3240757 gcgtgcggcacgtcgccgtg 3240776

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>emb|AL606653.3|OSJN00104 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0048E02,
             complete sequence
          Length = 121337

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 272   cggggcggcgcgtgagcgcg 291
             ||||||||||||||||||||
Sbjct: 34300 cggggcggcgcgtgagcgcg 34319


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,935,322
Number of Sequences: 3902068
Number of extensions: 3935322
Number of successful extensions: 86501
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 85207
Number of HSP's gapped (non-prelim): 1289
length of query: 589
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 566
effective length of database: 17,143,297,704
effective search space: 9703106500464
effective search space used: 9703106500464
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result