ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal17c22
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1MDAR2_ARATH (Q9LK94) Probable monodehydroascorbate reductase, cy... 150 3e-36
2MDAR3_ARATH (Q9LFA3) Probable monodehydroascorbate reductase, cy... 110 3e-24
3MDAR_PEA (Q40977) Monodehydroascorbate reductase (EC 1.6.5.4) (M... 110 4e-24
4MDAR1_ARATH (Q9SR59) Probable monodehydroascorbate reductase, cy... 102 1e-21
5MDAR4_ARATH (Q93WJ8) Probable monodehydroascorbate reductase, cy... 100 5e-21
6MDAR_LYCES (Q43497) Monodehydroascorbate reductase (EC 1.6.5.4) ... 98 3e-20
7MDARS_CUCSA (Q42711) Monodehydroascorbate reductase, seedling is... 94 4e-19
8MDARF_CUCSA (P83966) Monodehydroascorbate reductase, fruit isozy... 76 1e-13
9MDARP_ARATH (P92947) Monodehydroascorbate reductase, chloroplast... 72 2e-12
10XPC_MOUSE (P51612) DNA-repair protein complementing XP-C cells h... 35 0.16
11WSC2_YEAST (P53832) Cell wall integrity and stress response comp... 34 0.46
12PININ_BOVIN (P79122) Pinin 33 1.0
13CFAH_MOUSE (P06909) Complement factor H precursor (Protein beta-... 33 1.0
14HIC1_MOUSE (Q9R1Y5) Hypermethylated in cancer 1 protein (Hic-1) 32 1.3
15LPLA_ECOL6 (Q8FA49) Lipoate-protein ligase A (EC 6.3.2.-) 32 1.3
16XPC_HUMAN (Q01831) DNA-repair protein complementing XP-C cells (... 32 1.8
17YAMP_RHOCA (P14172) Hypothetical 28.2 kDa protein in ampR 5'region 32 2.3
18CAPS1_HUMAN (Q9ULU8) Calcium-dependent secretion activator 1 (Ca... 31 3.0
19CHRD_HUMAN (Q9H2X0) Chordin precursor 31 3.9
20TIR2_YEAST (P33890) Cold shock-induced protein TIR2 precursor (S... 31 3.9
21COBQ_METTH (O26880) Probable cobyric acid synthase 30 5.1
22PININ_MOUSE (O35691) Pinin 30 6.7
23DLL4_MOUSE (Q9JI71) Delta-like protein 4 precursor (Drosophila D... 30 8.7
24SFR16_HUMAN (Q8N2M8) Splicing factor, arginine/serine-rich 16 (S... 30 8.7
25VE2_HPV28 (P50771) Regulatory protein E2 30 8.7
26CAPS1_RAT (Q62717) Calcium-dependent secretion activator 1 (Calc... 30 8.7
27CAPS1_MOUSE (Q80TJ1) Calcium-dependent secretion activator 1 (Ca... 30 8.7
28ATPG_BARQU (Q6FYM2) ATP synthase gamma chain (EC 3.6.3.14) (ATP ... 30 8.7

>MDAR2_ARATH (Q9LK94) Probable monodehydroascorbate reductase, cytoplasmic|
           isoform 2 (EC 1.6.5.4) (MDAR 2)
          Length = 488

 Score =  150 bits (380), Expect = 3e-36
 Identities = 75/157 (47%), Positives = 104/157 (66%), Gaps = 15/157 (9%)
 Frame = -3

Query: 633 RHAVAAILXPSKTRDVDYLPFFYSRVFTLSWQFYGDNVGEVIHYGDFTSNSPRFGAYWVS 454
           RHAV+AI+ P KT D DYLPFFYSRVF  SWQFYGD  G+V+H+G++  +   FGAYWV 
Sbjct: 322 RHAVSAIMDPIKTGDFDYLPFFYSRVFAFSWQFYGDPTGDVVHFGEY-EDGKSFGAYWVK 380

Query: 453 KGQITGAFLEGGNRDDYEALSVVVRRKTKAS-DMSELERQGLAFA---IQESK----KEV 298
           KG + G+FLEGG +++YE +S   + K   + D+ ELER+GL FA   + + K    K++
Sbjct: 381 KGHLVGSFLEGGTKEEYETISKATQLKPAVTIDLEELEREGLGFAHTVVSQQKVPEVKDI 440

Query: 297 P-------DSGVTLGEKPTFVWYATAGVVAAVSISAF 208
           P        + V + +KP +VW+A  GVV A S++AF
Sbjct: 441 PSAEMVKQSASVVMIKKPLYVWHAATGVVVAASVAAF 477



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>MDAR3_ARATH (Q9LFA3) Probable monodehydroascorbate reductase, cytoplasmic|
           isoform 3 (EC 1.6.5.4) (MDAR 3)
          Length = 434

 Score =  110 bits (276), Expect = 3e-24
 Identities = 51/104 (49%), Positives = 72/104 (69%), Gaps = 2/104 (1%)
 Frame = -3

Query: 627 AVAAILXPSKTRDVDYLPFFYSRVFTLSWQFYGDNVGEVIHYGDFTSNSP--RFGAYWVS 454
           A+ A    +   + DYLPFFYSR F LSWQFYGDNVG+ + +GD   ++P  RFGAYWV 
Sbjct: 328 AIKAAEGGAAVEEYDYLPFFYSRSFDLSWQFYGDNVGDSVLFGDSNPSNPKPRFGAYWVQ 387

Query: 453 KGQITGAFLEGGNRDDYEALSVVVRRKTKASDMSELERQGLAFA 322
            G++ GAF+EGG+ D+ +AL+ V + +  A  + EL +QG++FA
Sbjct: 388 GGKVVGAFMEGGSGDENKALAKVAKARPSAESLDELVKQGISFA 431



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>MDAR_PEA (Q40977) Monodehydroascorbate reductase (EC 1.6.5.4) (MDAR)|
           (Ascorbate free radical reductase) (AFR reductase)
          Length = 433

 Score =  110 bits (275), Expect = 4e-24
 Identities = 50/104 (48%), Positives = 70/104 (67%), Gaps = 2/104 (1%)
 Frame = -3

Query: 627 AVAAILXPSKTRDVDYLPFFYSRVFTLSWQFYGDNVGEVIHYGDF--TSNSPRFGAYWVS 454
           A+ A        + DYLP+FYSR F LSWQFYGDNVGE + +GD    S+ P+FG YW+ 
Sbjct: 327 AIFAADVGKSVEEYDYLPYFYSRSFDLSWQFYGDNVGETVLFGDNDPASSKPKFGTYWIK 386

Query: 453 KGQITGAFLEGGNRDDYEALSVVVRRKTKASDMSELERQGLAFA 322
           +G++ GAFLEGG  D+ +A++ V R K    D+++L  +GL+FA
Sbjct: 387 EGKVVGAFLEGGTPDENKAIAKVARAKPAVEDVNQLAEEGLSFA 430



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>MDAR1_ARATH (Q9SR59) Probable monodehydroascorbate reductase, cytoplasmic|
           isoform 1 (EC 1.6.5.4) (MDAR 1)
          Length = 441

 Score =  102 bits (253), Expect = 1e-21
 Identities = 44/92 (47%), Positives = 63/92 (68%), Gaps = 2/92 (2%)
 Frame = -3

Query: 591 DVDYLPFFYSRVFTLSWQFYGDNVGEVIHYGDFTSNS--PRFGAYWVSKGQITGAFLEGG 418
           D DYLP+FYSR F LSW+FYG+NVGE + +GD    S  P+FG YWV  G++ G FLEGG
Sbjct: 342 DYDYLPYFYSRFFKLSWEFYGENVGESVLFGDNDPKSPKPKFGTYWVKDGKVVGVFLEGG 401

Query: 417 NRDDYEALSVVVRRKTKASDMSELERQGLAFA 322
            +++++A++ V R +     +  L  +GL+FA
Sbjct: 402 TQEEHKAIAKVARAQPSVESLDVLSEEGLSFA 433



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>MDAR4_ARATH (Q93WJ8) Probable monodehydroascorbate reductase, cytoplasmic|
           isoform 4 (EC 1.6.5.4) (MDAR 4)
          Length = 435

 Score =  100 bits (248), Expect = 5e-21
 Identities = 45/104 (43%), Positives = 68/104 (65%), Gaps = 2/104 (1%)
 Frame = -3

Query: 627 AVAAILXPSKTRDVDYLPFFYSRVFTLSWQFYGDNVGEVIHYGDFTSNS--PRFGAYWVS 454
           A+ A    +   + DYLP+FYSR F LSWQFYGDNVGE + +GD    S  P+FG+YW+ 
Sbjct: 329 AIKAAEEGNSIPEYDYLPYFYSRAFDLSWQFYGDNVGESVLFGDNDPESPKPKFGSYWIK 388

Query: 453 KGQITGAFLEGGNRDDYEALSVVVRRKTKASDMSELERQGLAFA 322
           + ++ GAFLEGG+ ++  A++ + R +     +  L ++GL+FA
Sbjct: 389 ERKVVGAFLEGGSPEENNAIAKLARAQPSVESLEVLSKEGLSFA 432



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>MDAR_LYCES (Q43497) Monodehydroascorbate reductase (EC 1.6.5.4) (MDAR)|
           (Ascorbate free radical reductase) (AFR reductase)
          Length = 433

 Score = 97.8 bits (242), Expect = 3e-20
 Identities = 49/107 (45%), Positives = 72/107 (67%), Gaps = 5/107 (4%)
 Frame = -3

Query: 627 AVAAILXPSKTRDVD---YLPFFYSRVFTLSWQFYGDNVGEVIHYGDFTSNSP--RFGAY 463
           AV AI    + + VD   YLP+FYSR F LSWQFYGDNVGE + +GD   NS   +FG Y
Sbjct: 325 AVKAIFASEQGKSVDEYDYLPYFYSRAFDLSWQFYGDNVGETVLFGDADPNSATHKFGQY 384

Query: 462 WVSKGQITGAFLEGGNRDDYEALSVVVRRKTKASDMSELERQGLAFA 322
           W+  G+I GAFLE G+ ++ +A++ V + +  A+ + +L ++G++FA
Sbjct: 385 WIKDGKIVGAFLESGSPEENKAIAKVAKVQPPAT-LDQLAQEGISFA 430



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>MDARS_CUCSA (Q42711) Monodehydroascorbate reductase, seedling isozyme (EC|
           1.6.5.4) (MDAR seedling) (Ascorbate free radical
           reductase seedling) (AFR reductase seedling)
          Length = 434

 Score = 94.0 bits (232), Expect = 4e-19
 Identities = 41/92 (44%), Positives = 64/92 (69%), Gaps = 2/92 (2%)
 Frame = -3

Query: 591 DVDYLPFFYSRVFTLSWQFYGDNVGEVIHYGDFTSNSP--RFGAYWVSKGQITGAFLEGG 418
           + DYLP+FYSR F LSWQFYGDNVG+ + +GD + +S   +FG+YW+  G++ GAFLE G
Sbjct: 340 EYDYLPYFYSRSFDLSWQFYGDNVGDAVLFGDNSPDSATHKFGSYWIKDGKVVGAFLESG 399

Query: 417 NRDDYEALSVVVRRKTKASDMSELERQGLAFA 322
           + ++ +A++ V R +        L ++G++FA
Sbjct: 400 SPEENKAIAKVARIQPSVESSDLLLKEGISFA 431



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>MDARF_CUCSA (P83966) Monodehydroascorbate reductase, fruit isozyme (EC 1.6.5.4)|
           (MDAR fruit) (Ascorbate free radical reductase fruit)
           (AFR reductase fruit) (Fragments)
          Length = 166

 Score = 75.9 bits (185), Expect = 1e-13
 Identities = 34/68 (50%), Positives = 44/68 (64%)
 Frame = -3

Query: 591 DVDYLPFFYSRVFTLSWQFYGDNVGEVIHYGDFTSNSPRFGAYWVSKGQITGAFLEGGNR 412
           + DYLP+FYSR F L+WQFYGDNVGE + + D       FG YW+   ++ G FLEGG  
Sbjct: 96  EYDYLPYFYSRTFNLAWQFYGDNVGETVLFPD------NFGTYWI---KVVGVFLEGGTP 146

Query: 411 DDYEALSV 388
           D+Y+   V
Sbjct: 147 DEYKVARV 154



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>MDARP_ARATH (P92947) Monodehydroascorbate reductase, chloroplast precursor (EC|
           1.6.5.4) (MDAR)
          Length = 493

 Score = 71.6 bits (174), Expect = 2e-12
 Identities = 37/109 (33%), Positives = 59/109 (54%), Gaps = 12/109 (11%)
 Frame = -3

Query: 633 RHAVAAILXPSKTRDVDYLPFFYSRVFTLS-------WQFYGDNVGEVIHYGDFTSNSPR 475
           +H V ++L  + T   DYLP+FYSRVF          WQF+GDNVGE +  G+F    P+
Sbjct: 377 QHCVKSLLT-AHTDTYDYLPYFYSRVFEYEGSPRKVWWQFFGDNVGETVEVGNF---DPK 432

Query: 474 FGAYWVSKGQITGAFLEGGNRDDYEALSVVVRR-----KTKASDMSELE 343
              +W+  G++ G  +E G+ ++++ L  + R      K K +  S +E
Sbjct: 433 IATFWIESGRLKGVLVESGSPEEFQLLPKLARSQPLVDKAKLASASSVE 481



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>XPC_MOUSE (P51612) DNA-repair protein complementing XP-C cells homolog|
           (Xeroderma pigmentosum group C-complementing protein
           homolog) (p125)
          Length = 930

 Score = 35.4 bits (80), Expect = 0.16
 Identities = 21/67 (31%), Positives = 32/67 (47%)
 Frame = -1

Query: 632 GTLSQPSXSLRKPGTSITCHSSTQESSHCPGSSTGTMSEK*FTTATSQATARGSAHTGSV 453
           G  S    S+  PG S    S++ ES + P +S     E+  +    +ATARG   TG+ 
Sbjct: 327 GRKSSKETSVEGPGGSSELSSNSPESHNKPTTSRRIKEEETLSEGRGKATARGKRGTGTA 386

Query: 452 RARSRAR 432
            +R R +
Sbjct: 387 GSRQRRK 393



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>WSC2_YEAST (P53832) Cell wall integrity and stress response component 2|
           precursor
          Length = 503

 Score = 33.9 bits (76), Expect = 0.46
 Identities = 25/77 (32%), Positives = 35/77 (45%), Gaps = 2/77 (2%)
 Frame = -1

Query: 623 SQPSXSLRKPGTSITCHSSTQESSHCPGSSTGTMSEK*FTTATSQATARGSAHTGSVRAR 444
           S  S +     TS T  +S+  S+    +S  + SE   T ATS +T   S+ T +    
Sbjct: 191 SSTSTTSTTSTTSSTTSTSSSPSTTSSSTSASSSSETSSTQATSSSTTSTSSSTSTATVT 250

Query: 443 SRARSWKVGTGT--TTR 399
           S   S  +GT T  TTR
Sbjct: 251 STPSSTSIGTSTHYTTR 267



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>PININ_BOVIN (P79122) Pinin|
          Length = 703

 Score = 32.7 bits (73), Expect = 1.0
 Identities = 34/123 (27%), Positives = 53/123 (43%)
 Frame = -1

Query: 638 RXGTLSQPSXSLRKPGTSITCHSSTQESSHCPGSSTGTMSEK*FTTATSQATARGSAHTG 459
           R  T    S S     +S +  SS+  SS   GSS+   S    +T+ S +    S+ T 
Sbjct: 580 RNRTSKSRSRSSSSSSSSSSSTSSSSGSSSSSGSSSSRTSSSSSSTSGSSSRDSSSSTTS 639

Query: 458 SVRARSRARSWKVGTGTTTRHCRWLSGVKPRPRTCLNLKDKA*RLPSRKARKRCLTAGLP 279
           S  +RSR+R    G     +H R +   K R  + L    K+ +  S +  K   ++G+P
Sbjct: 640 SSESRSRSRG--RGHNRDRKHRRSVDR-KRRDASGLERSHKSAKGGSSRDAKAVSSSGMP 696

Query: 278 SAK 270
             K
Sbjct: 697 RFK 699



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>CFAH_MOUSE (P06909) Complement factor H precursor (Protein beta-1-H)|
          Length = 1234

 Score = 32.7 bits (73), Expect = 1.0
 Identities = 18/49 (36%), Positives = 25/49 (51%)
 Frame = +3

Query: 294 QAPLSCFPGWQTLGLVFQVQTCPRPWFYAGQPPTMPRSRPGSHLPGTRP 440
           QA   C PG++TLG +  V+ C    + A  P  + R +P  H PG  P
Sbjct: 47  QATYKCRPGYRTLGTI--VKVCKNGKWVASNPSRICRKKPCGH-PGDTP 92



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>HIC1_MOUSE (Q9R1Y5) Hypermethylated in cancer 1 protein (Hic-1)|
          Length = 892

 Score = 32.3 bits (72), Expect = 1.3
 Identities = 27/92 (29%), Positives = 33/92 (35%), Gaps = 5/92 (5%)
 Frame = -1

Query: 350 NLKDKA*RLPSRKARKRCLTAGLPSAKSPPSYGMQRQGSLRQCRSPRSVIGTAGSAAGGE 171
           NL+D      +    + C     P+A SP      R G    CR     I   G   G E
Sbjct: 66  NLQDLLSSASASLLAQVCARGRSPAAHSPRVAARWRHGRGSVCRFGPLQIRVCGKRGGAE 125

Query: 170 TR-----DRFAGGWDKLLEGRRKIYCLHTVTW 90
           TR     D  A   D+   GRR  +C H   W
Sbjct: 126 TRPGRGEDGPARQTDRGPGGRRAAHCSHVPPW 157



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>LPLA_ECOL6 (Q8FA49) Lipoate-protein ligase A (EC 6.3.2.-)|
          Length = 337

 Score = 32.3 bits (72), Expect = 1.3
 Identities = 30/116 (25%), Positives = 49/116 (42%), Gaps = 6/116 (5%)
 Frame = -3

Query: 621 AAILXPSKTRDVDYLPFFYSRVFTLSWQFYGDNVGEVIHYGDFTSNSPRFGA----YWVS 454
           A I+ P KT D+      ++R  +  W F     G+   +         +G     + V 
Sbjct: 217 AEIISPDKTPDLPNFAETFARQSSWEWNF-----GQAPAFSHLLDERFSWGGVELHFDVE 271

Query: 453 KGQITGA--FLEGGNRDDYEALSVVVRRKTKASDMSELERQGLAFAIQESKKEVPD 292
           KG IT A  F +  N    EAL+  ++     +DM + E + L     E +KE+P+
Sbjct: 272 KGHITRAQVFTDSLNPAPLEALAGRLQGCLYRADMLQQECEALLVDFPEQEKELPE 327



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>XPC_HUMAN (Q01831) DNA-repair protein complementing XP-C cells (Xeroderma|
           pigmentosum group C complementing protein) (p125)
          Length = 939

 Score = 32.0 bits (71), Expect = 1.8
 Identities = 18/56 (32%), Positives = 27/56 (48%)
 Frame = -1

Query: 596 PGTSITCHSSTQESSHCPGSSTGTMSEK*FTTATSQATARGSAHTGSVRARSRARS 429
           PG S    S   E+   P +S GT  E+ F   T + +A+G  + G  + RS+  S
Sbjct: 342 PGGSSETSSQVLENHTKPKTSKGTKQEETFAKGTCRPSAKGKRNKGGRKKRSKPSS 397



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>YAMP_RHOCA (P14172) Hypothetical 28.2 kDa protein in ampR 5'region|
          Length = 260

 Score = 31.6 bits (70), Expect = 2.3
 Identities = 20/62 (32%), Positives = 29/62 (46%)
 Frame = -1

Query: 395 CRWLSGVKPRPRTCLNLKDKA*RLPSRKARKRCLTAGLPSAKSPPSYGMQRQGSLRQCRS 216
           CR ++ +KP+    +   D A + P  +  K  +  G P     PS  + RQGSL  C  
Sbjct: 155 CRLMAAIKPKYTVRMTSCDVASQAPLAQILKGMVPCGSPL----PSCRVSRQGSLSACPW 210

Query: 215 PR 210
           PR
Sbjct: 211 PR 212



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>CAPS1_HUMAN (Q9ULU8) Calcium-dependent secretion activator 1 (Calcium-dependent|
           activator protein for secretion 1) (CAPS-1)
          Length = 1353

 Score = 31.2 bits (69), Expect = 3.0
 Identities = 15/35 (42%), Positives = 20/35 (57%)
 Frame = -2

Query: 232 CGSVDLRVRLLVRQEAPQVVKPGIGLRAAGINCWK 128
           C   DL+++L VR + PQ +K    L A G N WK
Sbjct: 503 CPDQDLKIKLAVRMDKPQNMKHSGYLWAIGKNVWK 537



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>CHRD_HUMAN (Q9H2X0) Chordin precursor|
          Length = 955

 Score = 30.8 bits (68), Expect = 3.9
 Identities = 22/62 (35%), Positives = 30/62 (48%), Gaps = 7/62 (11%)
 Frame = +1

Query: 457 DPVCA----EPRAVACEVAVVNYFSDIVPVELPGQCEDS*VEEWQVIDVPGFRRLQD--- 615
           DP+C+    + R V C+  V    S   PV+ P QC     E+  V D+PG  R +D   
Sbjct: 723 DPLCSLCTCQRRTVICDPVVCPPPSCPHPVQAPDQCCPVCPEKQDVRDLPGLPRSRDPGE 782

Query: 616 GC 621
           GC
Sbjct: 783 GC 784



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>TIR2_YEAST (P33890) Cold shock-induced protein TIR2 precursor (Serine-rich|
           protein 2)
          Length = 251

 Score = 30.8 bits (68), Expect = 3.9
 Identities = 20/53 (37%), Positives = 25/53 (47%)
 Frame = -1

Query: 593 GTSITCHSSTQESSHCPGSSTGTMSEK*FTTATSQATARGSAHTGSVRARSRA 435
           GTS T  SST+ SS    S+  + SE   +   S + A  SA   S  A S A
Sbjct: 111 GTSTTAASSTEASSAATSSAVASSSETTSSAVASSSEATSSAVASSSEASSSA 163



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>COBQ_METTH (O26880) Probable cobyric acid synthase|
          Length = 504

 Score = 30.4 bits (67), Expect = 5.1
 Identities = 17/50 (34%), Positives = 27/50 (54%)
 Frame = -3

Query: 423 GGNRDDYEALSVVVRRKTKASDMSELERQGLAFAIQESKKEVPDSGVTLG 274
           G + DD +A+ +   R T  SD+  LE  G A  I++  +E+P  G+  G
Sbjct: 286 GDSLDDLDAIIIPGTRNT-ISDLIHLEENGFADEIRDLSREIPVFGICGG 334



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>PININ_MOUSE (O35691) Pinin|
          Length = 725

 Score = 30.0 bits (66), Expect = 6.7
 Identities = 33/118 (27%), Positives = 49/118 (41%)
 Frame = -1

Query: 623 SQPSXSLRKPGTSITCHSSTQESSHCPGSSTGTMSEK*FTTATSQATARGSAHTGSVRAR 444
           S  S S    G+S +  SS+  SS   GSS+   S    +++ S++ +RG  H    + R
Sbjct: 597 SSSSGSSSSSGSS-SSRSSSSSSSSTSGSSSRDSSSSTSSSSESRSRSRGRGHNRDRKHR 655

Query: 443 SRARSWKVGTGTTTRHCRWLSGVKPRPRTCLNLKDKA*RLPSRKARKRCLTAGLPSAK 270
                 +  T    R  +   G   R R     KDK+    SR  RKR ++    S K
Sbjct: 656 RSMDRKRRDTSGLERSHKSSKGGSSRDRK--GSKDKS----SRPDRKRSISESSRSGK 707



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>DLL4_MOUSE (Q9JI71) Delta-like protein 4 precursor (Drosophila Delta homolog|
           4)
          Length = 686

 Score = 29.6 bits (65), Expect = 8.7
 Identities = 21/66 (31%), Positives = 28/66 (42%), Gaps = 3/66 (4%)
 Frame = -1

Query: 581 TCHSSTQESSH---CPGSSTGTMSEK*FTTATSQATARGSAHTGSVRARSRARSWKVGTG 411
           +C    Q SS+   CP + TG+  EK     TS   A G    G    R  +R+ +   G
Sbjct: 377 SCRERNQGSSYACECPPNFTGSNCEKKVDRCTSNPCANG----GQCLNRGPSRTCRCRPG 432

Query: 410 TTTRHC 393
            T  HC
Sbjct: 433 FTGTHC 438



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>SFR16_HUMAN (Q8N2M8) Splicing factor, arginine/serine-rich 16 (Suppressor of|
           white-apricot homolog 2)
          Length = 659

 Score = 29.6 bits (65), Expect = 8.7
 Identities = 18/69 (26%), Positives = 33/69 (47%)
 Frame = -1

Query: 596 PGTSITCHSSTQESSHCPGSSTGTMSEK*FTTATSQATARGSAHTGSVRARSRARSWKVG 417
           PG + +    +  SS    S++ T S +  + ++S++   G  +     ARSR+RSW   
Sbjct: 352 PGRNASARRRSSSSSSS-SSASRTSSSRSSSRSSSRSRRGGGYYRSGRHARSRSRSWSRS 410

Query: 416 TGTTTRHCR 390
              + R+ R
Sbjct: 411 RSRSRRYSR 419



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>VE2_HPV28 (P50771) Regulatory protein E2|
          Length = 376

 Score = 29.6 bits (65), Expect = 8.7
 Identities = 12/37 (32%), Positives = 20/37 (54%)
 Frame = -1

Query: 140 KLLEGRRKIYCLHTVTWRKPCTNLYESVIVASCVNKY 30
           +L +G+RK+YC  + TWR  C +  ++  V      Y
Sbjct: 313 RLHKGKRKLYCKTSSTWRWSCESENQAAFVTIWYTSY 349



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>CAPS1_RAT (Q62717) Calcium-dependent secretion activator 1 (Calcium-dependent|
           activator protein for secretion 1) (CAPS-1) (rCAPS)
          Length = 1289

 Score = 29.6 bits (65), Expect = 8.7
 Identities = 14/35 (40%), Positives = 19/35 (54%)
 Frame = -2

Query: 232 CGSVDLRVRLLVRQEAPQVVKPGIGLRAAGINCWK 128
           C   DL+++L VR + PQ +K    L   G N WK
Sbjct: 501 CPDQDLKIKLAVRMDKPQNMKHSGYLWTIGKNVWK 535



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>CAPS1_MOUSE (Q80TJ1) Calcium-dependent secretion activator 1 (Calcium-dependent|
           activator protein for secretion 1) (CAPS-1)
          Length = 1355

 Score = 29.6 bits (65), Expect = 8.7
 Identities = 14/35 (40%), Positives = 19/35 (54%)
 Frame = -2

Query: 232 CGSVDLRVRLLVRQEAPQVVKPGIGLRAAGINCWK 128
           C   DL+++L VR + PQ +K    L   G N WK
Sbjct: 501 CPDQDLKIKLAVRMDKPQNMKHSGYLWTIGKNVWK 535



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>ATPG_BARQU (Q6FYM2) ATP synthase gamma chain (EC 3.6.3.14) (ATP synthase F1|
           sector gamma subunit)
          Length = 303

 Score = 29.6 bits (65), Expect = 8.7
 Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
 Frame = -2

Query: 289 RGYPRRKAHLRMVCNG-RGRCGSVDLRVRLLVRQEAPQVVKPG 164
           RG  R   HL +VC   RG CG+ ++++    RQ+   ++  G
Sbjct: 70  RGTGRNDVHLLVVCTAERGLCGAFNMQIARRARQQIKALLSAG 112


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 105,567,067
Number of Sequences: 219361
Number of extensions: 2481005
Number of successful extensions: 7572
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 7158
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7550
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6598423128
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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