| Clone Name | rbaal17c22 |
|---|---|
| Clone Library Name | barley_pub |
>MDAR2_ARATH (Q9LK94) Probable monodehydroascorbate reductase, cytoplasmic| isoform 2 (EC 1.6.5.4) (MDAR 2) Length = 488 Score = 150 bits (380), Expect = 3e-36 Identities = 75/157 (47%), Positives = 104/157 (66%), Gaps = 15/157 (9%) Frame = -3 Query: 633 RHAVAAILXPSKTRDVDYLPFFYSRVFTLSWQFYGDNVGEVIHYGDFTSNSPRFGAYWVS 454 RHAV+AI+ P KT D DYLPFFYSRVF SWQFYGD G+V+H+G++ + FGAYWV Sbjct: 322 RHAVSAIMDPIKTGDFDYLPFFYSRVFAFSWQFYGDPTGDVVHFGEY-EDGKSFGAYWVK 380 Query: 453 KGQITGAFLEGGNRDDYEALSVVVRRKTKAS-DMSELERQGLAFA---IQESK----KEV 298 KG + G+FLEGG +++YE +S + K + D+ ELER+GL FA + + K K++ Sbjct: 381 KGHLVGSFLEGGTKEEYETISKATQLKPAVTIDLEELEREGLGFAHTVVSQQKVPEVKDI 440 Query: 297 P-------DSGVTLGEKPTFVWYATAGVVAAVSISAF 208 P + V + +KP +VW+A GVV A S++AF Sbjct: 441 PSAEMVKQSASVVMIKKPLYVWHAATGVVVAASVAAF 477
>MDAR3_ARATH (Q9LFA3) Probable monodehydroascorbate reductase, cytoplasmic| isoform 3 (EC 1.6.5.4) (MDAR 3) Length = 434 Score = 110 bits (276), Expect = 3e-24 Identities = 51/104 (49%), Positives = 72/104 (69%), Gaps = 2/104 (1%) Frame = -3 Query: 627 AVAAILXPSKTRDVDYLPFFYSRVFTLSWQFYGDNVGEVIHYGDFTSNSP--RFGAYWVS 454 A+ A + + DYLPFFYSR F LSWQFYGDNVG+ + +GD ++P RFGAYWV Sbjct: 328 AIKAAEGGAAVEEYDYLPFFYSRSFDLSWQFYGDNVGDSVLFGDSNPSNPKPRFGAYWVQ 387 Query: 453 KGQITGAFLEGGNRDDYEALSVVVRRKTKASDMSELERQGLAFA 322 G++ GAF+EGG+ D+ +AL+ V + + A + EL +QG++FA Sbjct: 388 GGKVVGAFMEGGSGDENKALAKVAKARPSAESLDELVKQGISFA 431
>MDAR_PEA (Q40977) Monodehydroascorbate reductase (EC 1.6.5.4) (MDAR)| (Ascorbate free radical reductase) (AFR reductase) Length = 433 Score = 110 bits (275), Expect = 4e-24 Identities = 50/104 (48%), Positives = 70/104 (67%), Gaps = 2/104 (1%) Frame = -3 Query: 627 AVAAILXPSKTRDVDYLPFFYSRVFTLSWQFYGDNVGEVIHYGDF--TSNSPRFGAYWVS 454 A+ A + DYLP+FYSR F LSWQFYGDNVGE + +GD S+ P+FG YW+ Sbjct: 327 AIFAADVGKSVEEYDYLPYFYSRSFDLSWQFYGDNVGETVLFGDNDPASSKPKFGTYWIK 386 Query: 453 KGQITGAFLEGGNRDDYEALSVVVRRKTKASDMSELERQGLAFA 322 +G++ GAFLEGG D+ +A++ V R K D+++L +GL+FA Sbjct: 387 EGKVVGAFLEGGTPDENKAIAKVARAKPAVEDVNQLAEEGLSFA 430
>MDAR1_ARATH (Q9SR59) Probable monodehydroascorbate reductase, cytoplasmic| isoform 1 (EC 1.6.5.4) (MDAR 1) Length = 441 Score = 102 bits (253), Expect = 1e-21 Identities = 44/92 (47%), Positives = 63/92 (68%), Gaps = 2/92 (2%) Frame = -3 Query: 591 DVDYLPFFYSRVFTLSWQFYGDNVGEVIHYGDFTSNS--PRFGAYWVSKGQITGAFLEGG 418 D DYLP+FYSR F LSW+FYG+NVGE + +GD S P+FG YWV G++ G FLEGG Sbjct: 342 DYDYLPYFYSRFFKLSWEFYGENVGESVLFGDNDPKSPKPKFGTYWVKDGKVVGVFLEGG 401 Query: 417 NRDDYEALSVVVRRKTKASDMSELERQGLAFA 322 +++++A++ V R + + L +GL+FA Sbjct: 402 TQEEHKAIAKVARAQPSVESLDVLSEEGLSFA 433
>MDAR4_ARATH (Q93WJ8) Probable monodehydroascorbate reductase, cytoplasmic| isoform 4 (EC 1.6.5.4) (MDAR 4) Length = 435 Score = 100 bits (248), Expect = 5e-21 Identities = 45/104 (43%), Positives = 68/104 (65%), Gaps = 2/104 (1%) Frame = -3 Query: 627 AVAAILXPSKTRDVDYLPFFYSRVFTLSWQFYGDNVGEVIHYGDFTSNS--PRFGAYWVS 454 A+ A + + DYLP+FYSR F LSWQFYGDNVGE + +GD S P+FG+YW+ Sbjct: 329 AIKAAEEGNSIPEYDYLPYFYSRAFDLSWQFYGDNVGESVLFGDNDPESPKPKFGSYWIK 388 Query: 453 KGQITGAFLEGGNRDDYEALSVVVRRKTKASDMSELERQGLAFA 322 + ++ GAFLEGG+ ++ A++ + R + + L ++GL+FA Sbjct: 389 ERKVVGAFLEGGSPEENNAIAKLARAQPSVESLEVLSKEGLSFA 432
>MDAR_LYCES (Q43497) Monodehydroascorbate reductase (EC 1.6.5.4) (MDAR)| (Ascorbate free radical reductase) (AFR reductase) Length = 433 Score = 97.8 bits (242), Expect = 3e-20 Identities = 49/107 (45%), Positives = 72/107 (67%), Gaps = 5/107 (4%) Frame = -3 Query: 627 AVAAILXPSKTRDVD---YLPFFYSRVFTLSWQFYGDNVGEVIHYGDFTSNSP--RFGAY 463 AV AI + + VD YLP+FYSR F LSWQFYGDNVGE + +GD NS +FG Y Sbjct: 325 AVKAIFASEQGKSVDEYDYLPYFYSRAFDLSWQFYGDNVGETVLFGDADPNSATHKFGQY 384 Query: 462 WVSKGQITGAFLEGGNRDDYEALSVVVRRKTKASDMSELERQGLAFA 322 W+ G+I GAFLE G+ ++ +A++ V + + A+ + +L ++G++FA Sbjct: 385 WIKDGKIVGAFLESGSPEENKAIAKVAKVQPPAT-LDQLAQEGISFA 430
>MDARS_CUCSA (Q42711) Monodehydroascorbate reductase, seedling isozyme (EC| 1.6.5.4) (MDAR seedling) (Ascorbate free radical reductase seedling) (AFR reductase seedling) Length = 434 Score = 94.0 bits (232), Expect = 4e-19 Identities = 41/92 (44%), Positives = 64/92 (69%), Gaps = 2/92 (2%) Frame = -3 Query: 591 DVDYLPFFYSRVFTLSWQFYGDNVGEVIHYGDFTSNSP--RFGAYWVSKGQITGAFLEGG 418 + DYLP+FYSR F LSWQFYGDNVG+ + +GD + +S +FG+YW+ G++ GAFLE G Sbjct: 340 EYDYLPYFYSRSFDLSWQFYGDNVGDAVLFGDNSPDSATHKFGSYWIKDGKVVGAFLESG 399 Query: 417 NRDDYEALSVVVRRKTKASDMSELERQGLAFA 322 + ++ +A++ V R + L ++G++FA Sbjct: 400 SPEENKAIAKVARIQPSVESSDLLLKEGISFA 431
>MDARF_CUCSA (P83966) Monodehydroascorbate reductase, fruit isozyme (EC 1.6.5.4)| (MDAR fruit) (Ascorbate free radical reductase fruit) (AFR reductase fruit) (Fragments) Length = 166 Score = 75.9 bits (185), Expect = 1e-13 Identities = 34/68 (50%), Positives = 44/68 (64%) Frame = -3 Query: 591 DVDYLPFFYSRVFTLSWQFYGDNVGEVIHYGDFTSNSPRFGAYWVSKGQITGAFLEGGNR 412 + DYLP+FYSR F L+WQFYGDNVGE + + D FG YW+ ++ G FLEGG Sbjct: 96 EYDYLPYFYSRTFNLAWQFYGDNVGETVLFPD------NFGTYWI---KVVGVFLEGGTP 146 Query: 411 DDYEALSV 388 D+Y+ V Sbjct: 147 DEYKVARV 154
>MDARP_ARATH (P92947) Monodehydroascorbate reductase, chloroplast precursor (EC| 1.6.5.4) (MDAR) Length = 493 Score = 71.6 bits (174), Expect = 2e-12 Identities = 37/109 (33%), Positives = 59/109 (54%), Gaps = 12/109 (11%) Frame = -3 Query: 633 RHAVAAILXPSKTRDVDYLPFFYSRVFTLS-------WQFYGDNVGEVIHYGDFTSNSPR 475 +H V ++L + T DYLP+FYSRVF WQF+GDNVGE + G+F P+ Sbjct: 377 QHCVKSLLT-AHTDTYDYLPYFYSRVFEYEGSPRKVWWQFFGDNVGETVEVGNF---DPK 432 Query: 474 FGAYWVSKGQITGAFLEGGNRDDYEALSVVVRR-----KTKASDMSELE 343 +W+ G++ G +E G+ ++++ L + R K K + S +E Sbjct: 433 IATFWIESGRLKGVLVESGSPEEFQLLPKLARSQPLVDKAKLASASSVE 481
>XPC_MOUSE (P51612) DNA-repair protein complementing XP-C cells homolog| (Xeroderma pigmentosum group C-complementing protein homolog) (p125) Length = 930 Score = 35.4 bits (80), Expect = 0.16 Identities = 21/67 (31%), Positives = 32/67 (47%) Frame = -1 Query: 632 GTLSQPSXSLRKPGTSITCHSSTQESSHCPGSSTGTMSEK*FTTATSQATARGSAHTGSV 453 G S S+ PG S S++ ES + P +S E+ + +ATARG TG+ Sbjct: 327 GRKSSKETSVEGPGGSSELSSNSPESHNKPTTSRRIKEEETLSEGRGKATARGKRGTGTA 386 Query: 452 RARSRAR 432 +R R + Sbjct: 387 GSRQRRK 393
>WSC2_YEAST (P53832) Cell wall integrity and stress response component 2| precursor Length = 503 Score = 33.9 bits (76), Expect = 0.46 Identities = 25/77 (32%), Positives = 35/77 (45%), Gaps = 2/77 (2%) Frame = -1 Query: 623 SQPSXSLRKPGTSITCHSSTQESSHCPGSSTGTMSEK*FTTATSQATARGSAHTGSVRAR 444 S S + TS T +S+ S+ +S + SE T ATS +T S+ T + Sbjct: 191 SSTSTTSTTSTTSSTTSTSSSPSTTSSSTSASSSSETSSTQATSSSTTSTSSSTSTATVT 250 Query: 443 SRARSWKVGTGT--TTR 399 S S +GT T TTR Sbjct: 251 STPSSTSIGTSTHYTTR 267
>PININ_BOVIN (P79122) Pinin| Length = 703 Score = 32.7 bits (73), Expect = 1.0 Identities = 34/123 (27%), Positives = 53/123 (43%) Frame = -1 Query: 638 RXGTLSQPSXSLRKPGTSITCHSSTQESSHCPGSSTGTMSEK*FTTATSQATARGSAHTG 459 R T S S +S + SS+ SS GSS+ S +T+ S + S+ T Sbjct: 580 RNRTSKSRSRSSSSSSSSSSSTSSSSGSSSSSGSSSSRTSSSSSSTSGSSSRDSSSSTTS 639 Query: 458 SVRARSRARSWKVGTGTTTRHCRWLSGVKPRPRTCLNLKDKA*RLPSRKARKRCLTAGLP 279 S +RSR+R G +H R + K R + L K+ + S + K ++G+P Sbjct: 640 SSESRSRSRG--RGHNRDRKHRRSVDR-KRRDASGLERSHKSAKGGSSRDAKAVSSSGMP 696 Query: 278 SAK 270 K Sbjct: 697 RFK 699
>CFAH_MOUSE (P06909) Complement factor H precursor (Protein beta-1-H)| Length = 1234 Score = 32.7 bits (73), Expect = 1.0 Identities = 18/49 (36%), Positives = 25/49 (51%) Frame = +3 Query: 294 QAPLSCFPGWQTLGLVFQVQTCPRPWFYAGQPPTMPRSRPGSHLPGTRP 440 QA C PG++TLG + V+ C + A P + R +P H PG P Sbjct: 47 QATYKCRPGYRTLGTI--VKVCKNGKWVASNPSRICRKKPCGH-PGDTP 92
>HIC1_MOUSE (Q9R1Y5) Hypermethylated in cancer 1 protein (Hic-1)| Length = 892 Score = 32.3 bits (72), Expect = 1.3 Identities = 27/92 (29%), Positives = 33/92 (35%), Gaps = 5/92 (5%) Frame = -1 Query: 350 NLKDKA*RLPSRKARKRCLTAGLPSAKSPPSYGMQRQGSLRQCRSPRSVIGTAGSAAGGE 171 NL+D + + C P+A SP R G CR I G G E Sbjct: 66 NLQDLLSSASASLLAQVCARGRSPAAHSPRVAARWRHGRGSVCRFGPLQIRVCGKRGGAE 125 Query: 170 TR-----DRFAGGWDKLLEGRRKIYCLHTVTW 90 TR D A D+ GRR +C H W Sbjct: 126 TRPGRGEDGPARQTDRGPGGRRAAHCSHVPPW 157
>LPLA_ECOL6 (Q8FA49) Lipoate-protein ligase A (EC 6.3.2.-)| Length = 337 Score = 32.3 bits (72), Expect = 1.3 Identities = 30/116 (25%), Positives = 49/116 (42%), Gaps = 6/116 (5%) Frame = -3 Query: 621 AAILXPSKTRDVDYLPFFYSRVFTLSWQFYGDNVGEVIHYGDFTSNSPRFGA----YWVS 454 A I+ P KT D+ ++R + W F G+ + +G + V Sbjct: 217 AEIISPDKTPDLPNFAETFARQSSWEWNF-----GQAPAFSHLLDERFSWGGVELHFDVE 271 Query: 453 KGQITGA--FLEGGNRDDYEALSVVVRRKTKASDMSELERQGLAFAIQESKKEVPD 292 KG IT A F + N EAL+ ++ +DM + E + L E +KE+P+ Sbjct: 272 KGHITRAQVFTDSLNPAPLEALAGRLQGCLYRADMLQQECEALLVDFPEQEKELPE 327
>XPC_HUMAN (Q01831) DNA-repair protein complementing XP-C cells (Xeroderma| pigmentosum group C complementing protein) (p125) Length = 939 Score = 32.0 bits (71), Expect = 1.8 Identities = 18/56 (32%), Positives = 27/56 (48%) Frame = -1 Query: 596 PGTSITCHSSTQESSHCPGSSTGTMSEK*FTTATSQATARGSAHTGSVRARSRARS 429 PG S S E+ P +S GT E+ F T + +A+G + G + RS+ S Sbjct: 342 PGGSSETSSQVLENHTKPKTSKGTKQEETFAKGTCRPSAKGKRNKGGRKKRSKPSS 397
>YAMP_RHOCA (P14172) Hypothetical 28.2 kDa protein in ampR 5'region| Length = 260 Score = 31.6 bits (70), Expect = 2.3 Identities = 20/62 (32%), Positives = 29/62 (46%) Frame = -1 Query: 395 CRWLSGVKPRPRTCLNLKDKA*RLPSRKARKRCLTAGLPSAKSPPSYGMQRQGSLRQCRS 216 CR ++ +KP+ + D A + P + K + G P PS + RQGSL C Sbjct: 155 CRLMAAIKPKYTVRMTSCDVASQAPLAQILKGMVPCGSPL----PSCRVSRQGSLSACPW 210 Query: 215 PR 210 PR Sbjct: 211 PR 212
>CAPS1_HUMAN (Q9ULU8) Calcium-dependent secretion activator 1 (Calcium-dependent| activator protein for secretion 1) (CAPS-1) Length = 1353 Score = 31.2 bits (69), Expect = 3.0 Identities = 15/35 (42%), Positives = 20/35 (57%) Frame = -2 Query: 232 CGSVDLRVRLLVRQEAPQVVKPGIGLRAAGINCWK 128 C DL+++L VR + PQ +K L A G N WK Sbjct: 503 CPDQDLKIKLAVRMDKPQNMKHSGYLWAIGKNVWK 537
>CHRD_HUMAN (Q9H2X0) Chordin precursor| Length = 955 Score = 30.8 bits (68), Expect = 3.9 Identities = 22/62 (35%), Positives = 30/62 (48%), Gaps = 7/62 (11%) Frame = +1 Query: 457 DPVCA----EPRAVACEVAVVNYFSDIVPVELPGQCEDS*VEEWQVIDVPGFRRLQD--- 615 DP+C+ + R V C+ V S PV+ P QC E+ V D+PG R +D Sbjct: 723 DPLCSLCTCQRRTVICDPVVCPPPSCPHPVQAPDQCCPVCPEKQDVRDLPGLPRSRDPGE 782 Query: 616 GC 621 GC Sbjct: 783 GC 784
>TIR2_YEAST (P33890) Cold shock-induced protein TIR2 precursor (Serine-rich| protein 2) Length = 251 Score = 30.8 bits (68), Expect = 3.9 Identities = 20/53 (37%), Positives = 25/53 (47%) Frame = -1 Query: 593 GTSITCHSSTQESSHCPGSSTGTMSEK*FTTATSQATARGSAHTGSVRARSRA 435 GTS T SST+ SS S+ + SE + S + A SA S A S A Sbjct: 111 GTSTTAASSTEASSAATSSAVASSSETTSSAVASSSEATSSAVASSSEASSSA 163
>COBQ_METTH (O26880) Probable cobyric acid synthase| Length = 504 Score = 30.4 bits (67), Expect = 5.1 Identities = 17/50 (34%), Positives = 27/50 (54%) Frame = -3 Query: 423 GGNRDDYEALSVVVRRKTKASDMSELERQGLAFAIQESKKEVPDSGVTLG 274 G + DD +A+ + R T SD+ LE G A I++ +E+P G+ G Sbjct: 286 GDSLDDLDAIIIPGTRNT-ISDLIHLEENGFADEIRDLSREIPVFGICGG 334
>PININ_MOUSE (O35691) Pinin| Length = 725 Score = 30.0 bits (66), Expect = 6.7 Identities = 33/118 (27%), Positives = 49/118 (41%) Frame = -1 Query: 623 SQPSXSLRKPGTSITCHSSTQESSHCPGSSTGTMSEK*FTTATSQATARGSAHTGSVRAR 444 S S S G+S + SS+ SS GSS+ S +++ S++ +RG H + R Sbjct: 597 SSSSGSSSSSGSS-SSRSSSSSSSSTSGSSSRDSSSSTSSSSESRSRSRGRGHNRDRKHR 655 Query: 443 SRARSWKVGTGTTTRHCRWLSGVKPRPRTCLNLKDKA*RLPSRKARKRCLTAGLPSAK 270 + T R + G R R KDK+ SR RKR ++ S K Sbjct: 656 RSMDRKRRDTSGLERSHKSSKGGSSRDRK--GSKDKS----SRPDRKRSISESSRSGK 707
>DLL4_MOUSE (Q9JI71) Delta-like protein 4 precursor (Drosophila Delta homolog| 4) Length = 686 Score = 29.6 bits (65), Expect = 8.7 Identities = 21/66 (31%), Positives = 28/66 (42%), Gaps = 3/66 (4%) Frame = -1 Query: 581 TCHSSTQESSH---CPGSSTGTMSEK*FTTATSQATARGSAHTGSVRARSRARSWKVGTG 411 +C Q SS+ CP + TG+ EK TS A G G R +R+ + G Sbjct: 377 SCRERNQGSSYACECPPNFTGSNCEKKVDRCTSNPCANG----GQCLNRGPSRTCRCRPG 432 Query: 410 TTTRHC 393 T HC Sbjct: 433 FTGTHC 438
>SFR16_HUMAN (Q8N2M8) Splicing factor, arginine/serine-rich 16 (Suppressor of| white-apricot homolog 2) Length = 659 Score = 29.6 bits (65), Expect = 8.7 Identities = 18/69 (26%), Positives = 33/69 (47%) Frame = -1 Query: 596 PGTSITCHSSTQESSHCPGSSTGTMSEK*FTTATSQATARGSAHTGSVRARSRARSWKVG 417 PG + + + SS S++ T S + + ++S++ G + ARSR+RSW Sbjct: 352 PGRNASARRRSSSSSSS-SSASRTSSSRSSSRSSSRSRRGGGYYRSGRHARSRSRSWSRS 410 Query: 416 TGTTTRHCR 390 + R+ R Sbjct: 411 RSRSRRYSR 419
>VE2_HPV28 (P50771) Regulatory protein E2| Length = 376 Score = 29.6 bits (65), Expect = 8.7 Identities = 12/37 (32%), Positives = 20/37 (54%) Frame = -1 Query: 140 KLLEGRRKIYCLHTVTWRKPCTNLYESVIVASCVNKY 30 +L +G+RK+YC + TWR C + ++ V Y Sbjct: 313 RLHKGKRKLYCKTSSTWRWSCESENQAAFVTIWYTSY 349
>CAPS1_RAT (Q62717) Calcium-dependent secretion activator 1 (Calcium-dependent| activator protein for secretion 1) (CAPS-1) (rCAPS) Length = 1289 Score = 29.6 bits (65), Expect = 8.7 Identities = 14/35 (40%), Positives = 19/35 (54%) Frame = -2 Query: 232 CGSVDLRVRLLVRQEAPQVVKPGIGLRAAGINCWK 128 C DL+++L VR + PQ +K L G N WK Sbjct: 501 CPDQDLKIKLAVRMDKPQNMKHSGYLWTIGKNVWK 535
>CAPS1_MOUSE (Q80TJ1) Calcium-dependent secretion activator 1 (Calcium-dependent| activator protein for secretion 1) (CAPS-1) Length = 1355 Score = 29.6 bits (65), Expect = 8.7 Identities = 14/35 (40%), Positives = 19/35 (54%) Frame = -2 Query: 232 CGSVDLRVRLLVRQEAPQVVKPGIGLRAAGINCWK 128 C DL+++L VR + PQ +K L G N WK Sbjct: 501 CPDQDLKIKLAVRMDKPQNMKHSGYLWTIGKNVWK 535
>ATPG_BARQU (Q6FYM2) ATP synthase gamma chain (EC 3.6.3.14) (ATP synthase F1| sector gamma subunit) Length = 303 Score = 29.6 bits (65), Expect = 8.7 Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 1/43 (2%) Frame = -2 Query: 289 RGYPRRKAHLRMVCNG-RGRCGSVDLRVRLLVRQEAPQVVKPG 164 RG R HL +VC RG CG+ ++++ RQ+ ++ G Sbjct: 70 RGTGRNDVHLLVVCTAERGLCGAFNMQIARRARQQIKALLSAG 112 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 105,567,067 Number of Sequences: 219361 Number of extensions: 2481005 Number of successful extensions: 7572 Number of sequences better than 10.0: 28 Number of HSP's better than 10.0 without gapping: 7158 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 7550 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6598423128 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)