ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal6n06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY485644.1| Triticum monococcum phosphatidylserine decarboxyl... 531 e-148
2gb|AY951944.1| Triticum monococcum TmBAC 21C6 FR-Am2 locus, geno... 339 6e-90
3gb|AY089999.1| Lolium perenne CACTA-family transposon sequence 168 1e-38
4gb|U76261.1|HVU76261 Hordeum vulgare highly repeated, retrotrans... 163 8e-37
5gb|AF325196.1|AF325196 Triticum aestivum PST19 (Pst19), LRR19 (L... 113 7e-22
6gb|AC118002.2| Homo sapiens chromosome 11, clone RP11-258H15, co... 46 0.13
7gb|AC090791.6| Homo sapiens chromosome 11, clone RP11-466I1, com... 46 0.13
8emb|AL356497.3| Human DNA sequence from clone RP4-578N1 on chrom... 46 0.13
9ref|XM_614538.2| PREDICTED: Bos taurus similar to DDM36 (LOC5410... 44 0.53
10dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.53
11dbj|AP005579.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.53
12dbj|AK059873.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.53
13ref|XM_635214.1| Dictyostelium discoideum actin binding protein ... 42 2.1
14gb|AC120986.2| Oryza sativa (japonica cultivar-group) chromosome... 42 2.1
15gb|AC162934.6| Mus musculus BAC clone RP23-131P21 from chromosom... 42 2.1
16gb|AC165366.2| Mus musculus BAC clone RP23-51H15 from chromosome... 42 2.1
17emb|AJ812734.1| Dictyostelium discoideum mRNA for diaphanous-rel... 42 2.1
18dbj|AB201131.1| Termitomyces sp. Group5 lccKU418-20 mRNA for put... 42 2.1
19dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.1
20gb|AC062016.5| Homo sapiens BAC clone RP11-59P4 from 2, complete... 42 2.1
21dbj|AK119596.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 2.1
22dbj|AK101103.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 2.1
23gb|AF130866.6| Homo sapiens chromosome 8 clone GS1-172N13 map q2... 40 8.2
24gb|AC158652.5| Mus musculus 6 BAC RP23-238I17 (Roswell Park Canc... 40 8.2
25emb|BX927312.7| Zebrafish DNA sequence from clone CH211-87G12 in... 40 8.2
26gb|CP000107.1| Ehrlichia canis str. Jake, complete genome 40 8.2
27emb|AL691455.20| Human DNA sequence from clone CTD-2411I11 on ch... 40 8.2
28emb|AL031387.4|HS596C15 Human DNA sequence from clone RP4-596C15... 40 8.2
29gb|AC025678.7| Homo sapiens chromosome 15, clone RP11-602M11, co... 40 8.2
30gb|AC003061.1| Mouse Chromosome 6 BAC Clone b245c12, complete se... 40 8.2
31gb|AC093278.2| Homo sapiens chromosome 5 clone RP11-389C8, compl... 40 8.2
32gb|AC159378.8| Mus musculus 10 BAC RP23-199N18 (Roswell Park Can... 40 8.2
33gb|AC027139.5|AC027139 Homo sapiens, clone RP11-1H8, complete se... 40 8.2
34gb|AC092236.1|AC092236 Drosophila melanogaster, chromosome 2L, r... 40 8.2
35dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.2
36gb|AC138185.2| Homo sapiens chromosome 8, clone RP11-640O8, comp... 40 8.2
37dbj|AP003513.2| Oryza sativa (japonica cultivar-group) genomic D... 40 8.2
38gb|AC153535.4| Mus musculus 10 BAC RP23-398N22 (Roswell Park Can... 40 8.2
39gb|AC007305.40| Mus musculus strain 129/SvJ clone mgs1-211l20 ma... 40 8.2
40dbj|AB011482.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 40 8.2
41gb|AF061186.1|AF061186 Phytophthora infestans cyst germination s... 40 8.2
42gb|AE003641.3| Drosophila melanogaster chromosome 2L, section 50... 40 8.2
43emb|AL355834.4|CNS05TCN Human chromosome 14 DNA sequence BAC R-9... 40 8.2
44dbj|AP005856.2| Homo sapiens genomic DNA, chromosome 8q24, clone... 40 8.2
45emb|AL845299.13| Mouse DNA sequence from clone RP23-375N8 on chr... 40 8.2
46emb|CR974587.14| Pig DNA sequence from clone CH242-288P9 on chro... 40 8.2
47dbj|AP004981.1| Lotus japonicus genomic DNA, chromosome 3, clone... 40 8.2 
>gb|AY485644.1| Triticum monococcum phosphatidylserine decarboxylase, ZCCT2, ZCCT1, and
              SNF2P genes, complete cds; nucellin pseudogene, complete
              sequence; putative transposase, phosphatidylinositol
              phosphatidylcholine transfer protein sec14 cytosolic-like
              protein, and phytochrome P450-like protein genes, complete
              cds; and unknown genes
          Length = 438828

 Score =  531 bits (268), Expect = e-148
 Identities = 389/427 (91%), Gaps = 13/427 (3%)
 Strand = Plus / Minus

                                                                          
Query: 1      atattagtctccgaatt-aaaataccgaacaaagttagaacattacaagtctcgagaccg 59
              ||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 323463 atattagtctccgaatttaaaataccgaacaaagttagaacattacaagtctcgaaaccg 323404

                                                                          
Query: 60     cgagtagcgagtttgtcttcacattacaattcgatatc-------taaactaccatcaca 112
              ||||||||||||||||||||||||||||| ||||||||       |||||||||||||||
Sbjct: 323403 cgagtagcgagtttgtcttcacattacaagtcgatatcgatcatctaaactaccatcaca 323344

                                                                          
Query: 113    tagaagagggttgcggtca---cgatgagcatcatcgtgatgaaactgatcttcatccgg 169
              |||||||| || |||||||   ||||||||||||||| |||||||||| ||||||||| |
Sbjct: 323343 tagaagagagtcgcggtcatcacgatgagcatcatcgcgatgaaactggtcttcatccag 323284

                                                                          
Query: 170    ttcctcctccgctcccacctctctctcccactagatagcgcgcgtatctagcttccgcct 229
              || ||||||||||||| ||||||||  || |||||||||||||||||||| |||||||||
Sbjct: 323283 tttctcctccgctccctcctctctc--ccgctagatagcgcgcgtatctaacttccgcct 323226

                                                                          
Query: 230    ccgccctagtggtgtaccctttgtaactattaccgctgaaacggtgaacctgtctccgac 289
              |||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||
Sbjct: 323225 ccgccctagtggtgtaccctttgtaactgttaccgctgaaacggtgaacctatctccgac 323166

                                                                          
Query: 290    actcctcccagtcgtcgtagacttcgggaacctcacccttgtacacgacatacgacgaca 349
              |||||||||||||||||||| || ||||||||| |||||| |||||||||||||||| ||
Sbjct: 323165 actcctcccagtcgtcgtagtctccgggaaccttacccttatacacgacatacgacggca 323106

                                                                          
Query: 350    tctctatgcactagacaaaccaaacattagtagcaattcgcagataatatataagcaata 409
              |||||||||||||| ||||| |||| |||||| |||||| |||| |||| ||||||||||
Sbjct: 323105 tctctatgcactagccaaacaaaacgttagtaacaattcacagacaatacataagcaata 323046

                     
Query: 410    tataagt 416
              |||||||
Sbjct: 323045 tataagt 323039
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>gb|AY951944.1| Triticum monococcum TmBAC 21C6 FR-Am2 locus, genomic sequence
          Length = 190469

 Score =  339 bits (171), Expect = 6e-90
 Identities = 368/432 (85%), Gaps = 25/432 (5%)
 Strand = Plus / Plus

                                                                          
Query: 1      atattagtctccgaatt-aaaataccgaacaaagttagaacatta-----caagtctcga 54
              ||||||||||||||||| |||| ||||||||||| ||||||||||     ||||||||||
Sbjct: 101072 atattagtctccgaattgaaaagaccgaacaaagatagaacattatattacaagtctcga 101131

                                                                          
Query: 55     gaccgcgagtagcgagtttgtcttcacattacaattcgatatc-------taaactacca 107
              ||||||||||       ||||||||||||||||| ||||||||       ||||||| ||
Sbjct: 101132 gaccgcgagt-------ttgtcttcacattacaagtcgatatcgatcatctaaactatca 101184

                                                                          
Query: 108    tcacatagaagagggttgcggtca---cgatgagcatcatcgtgatgaaactgatcttca 164
              ||||||||||||| | ||||||||   ||||||||||||||  |||||||||  ||||||
Sbjct: 101185 tcacatagaagagagctgcggtcatcacgatgagcatcatcacgatgaaactcgtcttca 101244

                                                                          
Query: 165    tccggttcctcctccgctcccacctctctctcccactagatagcgcgcgtatctagcttc 224
              ||||||||||||   |||||| |  | ||||||| |||||||| | |||||||||| |||
Sbjct: 101245 tccggttcctccaatgctccctc--ccctctcccgctagatagtgggcgtatctagattc 101302

                                                                          
Query: 225    cgcctccgccctagtggtgtaccctttgtaactattaccgctgaaacggtgaacctgtct 284
               ||||| |||||||||||||||| ||||||||||||||||||||| ||||||||||||||
Sbjct: 101303 ggcctcggccctagtggtgtaccatttgtaactattaccgctgaatcggtgaacctgtct 101362

                                                                          
Query: 285    ccgacactcctcccagtcgtcgtagacttcgggaacctcacccttgtacacgacatacga 344
              |||||||||||||||||||| ||||| | ||||||||| ||||||||||||||||||| |
Sbjct: 101363 ccgacactcctcccagtcgttgtagaatccgggaaccttacccttgtacacgacatacca 101422

                                                                          
Query: 345    cgacatctctatgcactagacaaaccaaacattagtagcaattcgcagataatatataag 404
              || |||| ||||||| ||| ||||| |||| |||||| |||||| |||| |||| |||||
Sbjct: 101423 cggcatcgctatgcagtagccaaacgaaacgttagtaccaattcacagacaatacataag 101482

                          
Query: 405    caatatataagt 416
              ||| ||||||||
Sbjct: 101483 caacatataagt 101494
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>gb|AY089999.1| Lolium perenne CACTA-family transposon sequence
          Length = 12483

 Score =  168 bits (85), Expect = 1e-38
 Identities = 208/248 (83%), Gaps = 2/248 (0%)
 Strand = Plus / Minus

                                                                         
Query: 95    atctaaactaccatcacatagaagagggttgcggtcacgatgagcatcatcgtgatgaaa 154
             |||| ||||||||||||||||||||| |||   ||||| |  |||| | ||  |||||||
Sbjct: 11774 atctgaactaccatcacatagaagagagttagagtcactactagcaccgtcccgatgaaa 11715

                                                                         
Query: 155   ctgatcttcatccggttcctcctccgctcccacctctctctcccactagatagcgcgcgt 214
              || |||||||| |||||||||||||||||  |||||||   || | | || ||| ||||
Sbjct: 11714 gtggtcttcatctggttcctcctccgctccgtcctctcta--ccgccacatggcgtgcgt 11657

                                                                         
Query: 215   atctagcttccgcctccgccctagtggtgtaccctttgtaactattaccgctgaaacggt 274
             ||||  |||| | |||||| |||||||||||||||||||| || ||||| || |||||||
Sbjct: 11656 atctgtcttcggtctccgctctagtggtgtaccctttgtagctgttaccactaaaacggt 11597

                                                                         
Query: 275   gaacctgtctccgacactcctcccagtcgtcgtagacttcgggaacctcacccttgtaca 334
             |||||| ||||||||||||||||||||||| ||||||| |||||||||  | ||||||||
Sbjct: 11596 gaacctatctccgacactcctcccagtcgttgtagactccgggaaccttgcacttgtaca 11537

                     
Query: 335   cgacatac 342
             ||||||||
Sbjct: 11536 cgacatac 11529
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>gb|U76261.1|HVU76261 Hordeum vulgare highly repeated, retrotransposon-like sequence
          Length = 5050

 Score =  163 bits (82), Expect = 8e-37
 Identities = 95/98 (96%), Gaps = 1/98 (1%)
 Strand = Plus / Minus

                                                                        
Query: 1    atattagtctccgaatt-aaaataccgaacaaagttagaacattacaagtctcgagaccg 59
            ||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2058 atattagtctctgaatttaaaataccgaacaaagttagaacattacaagtctcgagaccg 1999

                                                  
Query: 60   cgagtagcgagtttgtcttcacattacaattcgatatc 97
            ||||||||||||||||||||||||||||| ||||||||
Sbjct: 1998 cgagtagcgagtttgtcttcacattacaagtcgatatc 1961



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 38/41 (92%)
 Strand = Plus / Minus

                                                     
Query: 214  tatctagcttccgcctccgccctagtggtgtaccctttgta 254
            |||||| ||||||||||| |||| |||||||||||||||||
Sbjct: 1927 tatctaacttccgcctcctcccttgtggtgtaccctttgta 1887
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>gb|AF325196.1|AF325196 Triticum aestivum PST19 (Pst19), LRR19 (Lrr19), TAK19-1 (Tak19-1), and
             LRK19 (Lrk19) genes, complete cds
          Length = 35872

 Score =  113 bits (57), Expect = 7e-22
 Identities = 73/77 (94%), Gaps = 1/77 (1%)
 Strand = Plus / Minus

                                                                         
Query: 1     atattagtctccgaatt-aaaataccgaacaaagttagaacattacaagtctcgagaccg 59
             ||||||||||||||| | |||| ||||||||||| |||||||||||||||||||||||||
Sbjct: 15794 atattagtctccgaaatcaaaagaccgaacaaagatagaacattacaagtctcgagaccg 15735

                              
Query: 60    cgagtagcgagtttgtc 76
             |||||||||||||||||
Sbjct: 15734 cgagtagcgagtttgtc 15718
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>gb|AC118002.2| Homo sapiens chromosome 11, clone RP11-258H15, complete sequence
          Length = 160686

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 419    acattggaggtcattatatcttc 441
              |||||||||||||||||||||||
Sbjct: 128322 acattggaggtcattatatcttc 128300
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>gb|AC090791.6| Homo sapiens chromosome 11, clone RP11-466I1, complete sequence
          Length = 172865

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 419    acattggaggtcattatatcttc 441
              |||||||||||||||||||||||
Sbjct: 112104 acattggaggtcattatatcttc 112082
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>emb|AL356497.3| Human DNA sequence from clone RP4-578N1 on chromosome 11 Contains an
             STS and GSSs, complete sequence
          Length = 46344

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 419   acattggaggtcattatatcttc 441
             |||||||||||||||||||||||
Sbjct: 41307 acattggaggtcattatatcttc 41285
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>ref|XM_614538.2| PREDICTED: Bos taurus similar to DDM36 (LOC541098), mRNA
          Length = 3717

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 171  tcctcctccgctcccacctctc 192
            ||||||||||||||||||||||
Sbjct: 1976 tcctcctccgctcccacctctc 1955
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                          
Query: 415      gttgacattggaggtcattatatcttcatctacaccagcctg 456
                |||||||| ||  ||||| |||||||||||||| ||||||||
Sbjct: 15180208 gttgacatcggcagtcataatatcttcatctactccagcctg 15180167
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>dbj|AP005579.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OJ1740_D06
          Length = 187410

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                       
Query: 415   gttgacattggaggtcattatatcttcatctacaccagcctg 456
             |||||||| ||  ||||| |||||||||||||| ||||||||
Sbjct: 74184 gttgacatcggcagtcataatatcttcatctactccagcctg 74143
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>dbj|AK059873.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-207-F04, full
           insert sequence
          Length = 1234

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                     
Query: 415 gttgacattggaggtcattatatcttcatctacaccagcctg 456
           |||||||| ||  ||||| |||||||||||||| ||||||||
Sbjct: 764 gttgacatcggcagtcataatatcttcatctactccagcctg 723
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>ref|XM_635214.1| Dictyostelium discoideum actin binding protein (DDB0231188), partial
            mRNA
          Length = 3645

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 91   cgatatctaaactaccatcac 111
            |||||||||||||||||||||
Sbjct: 1192 cgatatctaaactaccatcac 1172
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>gb|AC120986.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1781_H11,
              complete sequence
          Length = 204649

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 163    catccggttcctcctccgctcccac 187
              |||||| ||||||||||||||||||
Sbjct: 140978 catccgtttcctcctccgctcccac 140954
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>gb|AC162934.6| Mus musculus BAC clone RP23-131P21 from chromosome 13, complete
             sequence
          Length = 223665

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 572   tcattgattcccagagtggat 592
             |||||||||||||||||||||
Sbjct: 75744 tcattgattcccagagtggat 75764
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>gb|AC165366.2| Mus musculus BAC clone RP23-51H15 from chromosome 13, complete sequence
          Length = 241514

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 572   tcattgattcccagagtggat 592
             |||||||||||||||||||||
Sbjct: 85891 tcattgattcccagagtggat 85871
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>emb|AJ812734.1| Dictyostelium discoideum mRNA for diaphanous-related formin dDia4
            (drf4 gene)
          Length = 3645

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 91   cgatatctaaactaccatcac 111
            |||||||||||||||||||||
Sbjct: 1192 cgatatctaaactaccatcac 1172
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>dbj|AB201131.1| Termitomyces sp. Group5 lccKU418-20 mRNA for putative laccase,
           partial cds, strain: KU418
          Length = 861

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 148 gatgaaactgatcttcatccg 168
           |||||||||||||||||||||
Sbjct: 586 gatgaaactgatcttcatccg 606
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 163      catccggttcctcctccgctcccac 187
                |||||| ||||||||||||||||||
Sbjct: 28060813 catccgtttcctcctccgctcccac 28060789
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>gb|AC062016.5| Homo sapiens BAC clone RP11-59P4 from 2, complete sequence
          Length = 187799

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 69    agtttgtcttcacattacaat 89
             |||||||||||||||||||||
Sbjct: 71889 agtttgtcttcacattacaat 71869
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>dbj|AK119596.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-117-D11, full
           insert sequence
          Length = 2378

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 163 catccggttcctcctccgctcccac 187
           |||||| ||||||||||||||||||
Sbjct: 97  catccgtttcctcctccgctcccac 121
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>dbj|AK101103.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033025C07, full
           insert sequence
          Length = 2356

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 163 catccggttcctcctccgctcccac 187
           |||||| ||||||||||||||||||
Sbjct: 98  catccgtttcctcctccgctcccac 122
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>gb|AF130866.6| Homo sapiens chromosome 8 clone GS1-172N13 map q24.22, complete
             sequence
          Length = 128891

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 181   ctcccacctctctctcccac 200
             ||||||||||||||||||||
Sbjct: 49400 ctcccacctctctctcccac 49381
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>gb|AC158652.5| Mus musculus 6 BAC RP23-238I17 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 217046

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 170   ttcctcctccgctcccacctctctctcc 197
             |||||||||| ||||| |||||||||||
Sbjct: 78736 ttcctcctcccctcccccctctctctcc 78709
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>emb|BX927312.7| Zebrafish DNA sequence from clone CH211-87G12 in linkage group 12,
             complete sequence
          Length = 124706

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 391   agataatatataagcaatat 410
             ||||||||||||||||||||
Sbjct: 82905 agataatatataagcaatat 82886
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>gb|CP000107.1| Ehrlichia canis str. Jake, complete genome
          Length = 1315030

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 394    taatatataagcaatatata 413
              ||||||||||||||||||||
Sbjct: 738461 taatatataagcaatatata 738442
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>emb|AL691455.20| Human DNA sequence from clone CTD-2411I11 on chromosome 10 Contains two
             CpG islands, complete sequence
          Length = 41452

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 181   ctcccacctctctctcccac 200
             ||||||||||||||||||||
Sbjct: 23677 ctcccacctctctctcccac 23696
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>emb|AL031387.4|HS596C15 Human DNA sequence from clone RP4-596C15 on chromosome Xq23 Contains
             the NXT2 gene for nuclear transport factor 2-like export
             factor 2 and the GUCY2F gene for guanylate cyclase 2F,
             retinal, complete sequence
          Length = 178863

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 171   tcctcctccgctcccacctc 190
             ||||||||||||||||||||
Sbjct: 55740 tcctcctccgctcccacctc 55759
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>gb|AC025678.7| Homo sapiens chromosome 15, clone RP11-602M11, complete sequence
          Length = 189533

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 175    cctccgctcccacctctctctccc 198
              |||| |||||||||||||||||||
Sbjct: 140651 cctctgctcccacctctctctccc 140674
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>gb|AC003061.1| Mouse Chromosome 6 BAC Clone b245c12, complete sequence
          Length = 162691

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 170    ttcctcctccgctcccacctctctctcc 197
              |||||||||| ||||| |||||||||||
Sbjct: 152081 ttcctcctcccctcccccctctctctcc 152108
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>gb|AC093278.2| Homo sapiens chromosome 5 clone RP11-389C8, complete sequence
          Length = 171858

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 349    atctctatgcactagacaaa 368
              ||||||||||||||||||||
Sbjct: 161437 atctctatgcactagacaaa 161456
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>gb|AC159378.8| Mus musculus 10 BAC RP23-199N18 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 202745

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 182    tcccacctctctctcccact 201
              ||||||||||||||||||||
Sbjct: 202547 tcccacctctctctcccact 202528
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>gb|AC027139.5|AC027139 Homo sapiens, clone RP11-1H8, complete sequence
          Length = 151498

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 175    cctccgctcccacctctctctccc 198
              |||| |||||||||||||||||||
Sbjct: 116317 cctctgctcccacctctctctccc 116340
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>gb|AC092236.1|AC092236 Drosophila melanogaster, chromosome 2L, region 34D-34D, BAC clone
             BACR30I21, complete sequence
          Length = 161682

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 393   ataatatataagcaatatataagt 416
             |||||||||||| |||||||||||
Sbjct: 73489 ataatatataagtaatatataagt 73512
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 396     atatataagcaatatataag 415
               ||||||||||||||||||||
Sbjct: 6557324 atatataagcaatatataag 6557305
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>gb|AC138185.2| Homo sapiens chromosome 8, clone RP11-640O8, complete sequence
          Length = 152309

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 181   ctcccacctctctctcccac 200
             ||||||||||||||||||||
Sbjct: 67952 ctcccacctctctctcccac 67933
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>dbj|AP003513.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0690H04
          Length = 137319

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 396   atatataagcaatatataag 415
             ||||||||||||||||||||
Sbjct: 73700 atatataagcaatatataag 73681
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>gb|AC153535.4| Mus musculus 10 BAC RP23-398N22 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 200061

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 182    tcccacctctctctcccact 201
              ||||||||||||||||||||
Sbjct: 166598 tcccacctctctctcccact 166617
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>gb|AC007305.40| Mus musculus strain 129/SvJ clone mgs1-211l20 map 6, complete sequence
          Length = 214840

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 170    ttcctcctccgctcccacctctctctcc 197
              |||||||||| ||||| |||||||||||
Sbjct: 160478 ttcctcctcccctcccccctctctctcc 160451
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>dbj|AB011482.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MUA2
          Length = 83478

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 396   atatataagcaatatataag 415
             ||||||||||||||||||||
Sbjct: 70851 atatataagcaatatataag 70832
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>gb|AF061186.1|AF061186 Phytophthora infestans cyst germination specific acidic repeat
           protein pseudogene, complete sequence; and cyst
           germination specific acidic repeat protein precursor
           (car59) gene, partial cds
          Length = 7049

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 71  tttgtcttcacattacaattcgat 94
           ||||||||||||| ||||||||||
Sbjct: 672 tttgtcttcacatgacaattcgat 649
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>gb|AE003641.3| Drosophila melanogaster chromosome 2L, section 50 of 83 of the complete
             sequence
          Length = 304772

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 393   ataatatataagcaatatataagt 416
             |||||||||||| |||||||||||
Sbjct: 90004 ataatatataagtaatatataagt 90027
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>emb|AL355834.4|CNS05TCN Human chromosome 14 DNA sequence BAC R-932A10 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 222275

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 98    taaactaccatcacatagaa 117
             ||||||||||||||||||||
Sbjct: 36739 taaactaccatcacatagaa 36720
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>dbj|AP005856.2| Homo sapiens genomic DNA, chromosome 8q24, clone: KB1568E2, complete
             sequence
          Length = 160612

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 181   ctcccacctctctctcccac 200
             ||||||||||||||||||||
Sbjct: 66734 ctcccacctctctctcccac 66715
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>emb|AL845299.13| Mouse DNA sequence from clone RP23-375N8 on chromosome 2, complete
             sequence
          Length = 169070

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 171   tcctcctccgctcccacctctctctccc 198
             ||||||||| ||||| ||||||||||||
Sbjct: 61101 tcctcctcccctcccccctctctctccc 61128
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>emb|CR974587.14| Pig DNA sequence from clone CH242-288P9 on chromosome 7, complete
             sequence
          Length = 165092

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 160   cttcatccggttcctcctccgctc 183
             |||||||| |||||||||||||||
Sbjct: 25235 cttcatcccgttcctcctccgctc 25258
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>dbj|AP004981.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT13N17, TM0436b,
            complete sequence
          Length = 43428

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 352  tctatgcactagacaaaccaaaca 375
            ||||||||| ||||||||||||||
Sbjct: 8470 tctatgcacaagacaaaccaaaca 8493


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,671,582
Number of Sequences: 3902068
Number of extensions: 4671582
Number of successful extensions: 89321
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 89051
Number of HSP's gapped (non-prelim): 263
length of query: 603
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 580
effective length of database: 17,143,297,704
effective search space: 9943112668320
effective search space used: 9943112668320
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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