| Clone Name | rbaal16n05 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | EPO_MACMU (Q28513) Erythropoietin precursor | 30 | 5.7 | 2 | ISPE_NOCFA (Q5YPY8) 4-diphosphocytidyl-2-C-methyl-D-erythritol k... | 30 | 5.7 | 3 | EPO_MACFA (P07865) Erythropoietin precursor | 29 | 7.5 | 4 | EPO_HUMAN (P01588) Erythropoietin precursor (Epoetin) | 29 | 9.7 |
|---|
>EPO_MACMU (Q28513) Erythropoietin precursor| Length = 192 Score = 29.6 bits (65), Expect = 5.7 Identities = 15/30 (50%), Positives = 19/30 (63%), Gaps = 6/30 (20%) Frame = -2 Query: 348 WLWLWLSLINYSIGL------LDLVCDARV 277 WLWL LSL++ +GL LVCD+RV Sbjct: 9 WLWLLLSLVSLPLGLPVPGAPPRLVCDSRV 38
>ISPE_NOCFA (Q5YPY8) 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC| 2.7.1.148) (CMK) (4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase) Length = 307 Score = 29.6 bits (65), Expect = 5.7 Identities = 13/20 (65%), Positives = 15/20 (75%) Frame = +3 Query: 453 LWDDGVGADEISAQPAALGS 512 LWD G+G DE+SA A LGS Sbjct: 123 LWDMGLGRDELSALAAELGS 142
>EPO_MACFA (P07865) Erythropoietin precursor| Length = 192 Score = 29.3 bits (64), Expect = 7.5 Identities = 14/30 (46%), Positives = 19/30 (63%), Gaps = 6/30 (20%) Frame = -2 Query: 348 WLWLWLSLINYSIGL------LDLVCDARV 277 WLWL LSL++ +GL L+CD+RV Sbjct: 9 WLWLLLSLVSLPLGLPVPGAPPRLICDSRV 38
>EPO_HUMAN (P01588) Erythropoietin precursor (Epoetin)| Length = 193 Score = 28.9 bits (63), Expect = 9.7 Identities = 14/30 (46%), Positives = 19/30 (63%), Gaps = 6/30 (20%) Frame = -2 Query: 348 WLWLWLSLINYSIGL------LDLVCDARV 277 WLWL LSL++ +GL L+CD+RV Sbjct: 9 WLWLLLSLLSLPLGLPVLGAPPRLICDSRV 38 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 63,951,407 Number of Sequences: 219361 Number of extensions: 1106256 Number of successful extensions: 2403 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 2366 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2403 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4315578075 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)