ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaal16m14 |
|---|---|
| Clone Library Name | barley_pub |
>RCAA_HORVU (Q40073) Ribulose bisphosphate carboxylase/oxygenase activase A,| chloroplast precursor (RuBisCO activase A) (RA A) Length = 464 Score = 343 bits (879), Expect = 4e-94 Identities = 167/168 (99%), Positives = 167/168 (99%) Frame = -3 Query: 749 PTRDDXIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGI 570 PTRDD IGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGI Sbjct: 297 PTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGI 356 Query: 569 ENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDAN 390 ENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDAN Sbjct: 357 ENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDAN 416 Query: 389 QDAMKTGSFYGKGAQQGTLPVPEGCTDQNAKNYDPTARSDDGSCLYTF 246 QDAMKTGSFYGKGAQQGTLPVPEGCTDQNAKNYDPTARSDDGSCLYTF Sbjct: 417 QDAMKTGSFYGKGAQQGTLPVPEGCTDQNAKNYDPTARSDDGSCLYTF 464
>RCA_ARATH (P10896) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 474 Score = 269 bits (687), Expect = 8e-72 Identities = 127/168 (75%), Positives = 147/168 (87%) Frame = -3 Query: 749 PTRDDXIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGI 570 PTR+D IGVCKGIF+TD + DE +V +VD FPGQSIDFFGALRARVYDDEVRK+V S G+ Sbjct: 307 PTREDRIGVCKGIFRTDKIKDEDIVTLVDQFPGQSIDFFGALRARVYDDEVRKFVESLGV 366 Query: 569 ENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDAN 390 E IGKRLVNSR+GP FEQP+MT EKL+EYG+MLV EQ+NVKRVQLA+TY+SQAALGDAN Sbjct: 367 EKIGKRLVNSREGPPVFEQPEMTYEKLMEYGNMLVMEQENVKRVQLAETYLSQAALGDAN 426 Query: 389 QDAMKTGSFYGKGAQQGTLPVPEGCTDQNAKNYDPTARSDDGSCLYTF 246 DA+ G+FYGKGAQQ LPVPEGCTD A+N+DPTARSDDG+C+Y F Sbjct: 427 ADAIGRGTFYGKGAQQVNLPVPEGCTDPVAENFDPTARSDDGTCVYNF 474
>RCA1_LARTR (Q7X9A0) Ribulose bisphosphate carboxylase/oxygenase activase 1,| chloroplast precursor (RuBisCO activase 1) (RA 1) (RubisCO activase alpha form) Length = 476 Score = 268 bits (685), Expect = 1e-71 Identities = 127/170 (74%), Positives = 147/170 (86%), Gaps = 2/170 (1%) Frame = -3 Query: 749 PTRDDXIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGI 570 PTR+D IGVCKGIF+TDNV+D+ +VK+VDTFPGQSIDFFGALRARVY DEVRKWV G+ Sbjct: 307 PTREDRIGVCKGIFRTDNVADDDIVKLVDTFPGQSIDFFGALRARVYHDEVRKWVSEVGV 366 Query: 569 ENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDAN 390 + IGK+LVNS++GP +FEQPKMT++KLL YG MLVQEQ+NVKRVQLAD YMS+AALGDAN Sbjct: 367 DTIGKKLVNSKEGPPSFEQPKMTIDKLLGYGGMLVQEQENVKRVQLADKYMSEAALGDAN 426 Query: 389 QDAMKTGSFYGKGAQQ--GTLPVPEGCTDQNAKNYDPTARSDDGSCLYTF 246 DA+K G+FYG A Q G +PVPEGCTD A NYDPTARSDDGSC+Y F Sbjct: 427 NDAIKRGTFYGGQAAQQVGNVPVPEGCTDPQATNYDPTARSDDGSCVYKF 476
>RCA_SPIOL (P10871) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 472 Score = 264 bits (675), Expect = 2e-70 Identities = 124/166 (74%), Positives = 144/166 (86%) Frame = -3 Query: 749 PTRDDXIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGI 570 PTR+D IGVC GIF+TD V E VVK+VD FPGQSIDFFGALRARVY DEVRKWV S G+ Sbjct: 305 PTREDRIGVCTGIFKTDKVPAEHVVKLVDAFPGQSIDFFGALRARVYHDEVRKWVNSVGV 364 Query: 569 ENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDAN 390 +N+GK+LVNS+DGP FEQP+MT++KL+EYG+MLVQEQ+NVKRVQLAD YMS AALGDAN Sbjct: 365 DNVGKKLVNSKDGPPVFEQPEMTLQKLMEYGNMLVQEQENVKRVQLADQYMSSAALGDAN 424 Query: 389 QDAMKTGSFYGKGAQQGTLPVPEGCTDQNAKNYDPTARSDDGSCLY 252 +DA+ G+F+GK AQQ +LPV +GCTD AKNYDPTARSDDGSC Y Sbjct: 425 KDAIDRGTFFGKAAQQVSLPVAQGCTDPEAKNYDPTARSDDGSCTY 470
>RCAB_HORVU (Q42450) Ribulose bisphosphate carboxylase/oxygenase activase B,| chloroplast precursor (RuBisCO activase B) (RA B) Length = 425 Score = 233 bits (594), Expect = 5e-61 Identities = 109/132 (82%), Positives = 123/132 (93%) Frame = -3 Query: 749 PTRDDXIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGI 570 PTR+D IGVCKGIF+TDNV DE+VV++VDTFPGQSIDFFGALRARVYDDEVRKWVG G+ Sbjct: 294 PTREDRIGVCKGIFRTDNVPDEAVVRLVDTFPGQSIDFFGALRARVYDDEVRKWVGEIGV 353 Query: 569 ENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDAN 390 ENI KRLVNSR+GP TF+QPKMT+EKL+EYGHMLVQEQ+NVKRVQLAD Y+S+AALG AN Sbjct: 354 ENISKRLVNSREGPPTFDQPKMTIEKLMEYGHMLVQEQENVKRVQLADKYLSEAALGQAN 413 Query: 389 QDAMKTGSFYGK 354 DAMKTG+FYGK Sbjct: 414 DDAMKTGAFYGK 425
>RCA_ORYSA (P93431) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 432 Score = 231 bits (589), Expect = 2e-60 Identities = 108/131 (82%), Positives = 122/131 (93%) Frame = -3 Query: 749 PTRDDXIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGI 570 PTRDD +GVCKGIF+TDNV DE +VKIVD+FPGQSIDFFGALRARVYDDEVRKWV TG+ Sbjct: 297 PTRDDRVGVCKGIFRTDNVPDEDIVKIVDSFPGQSIDFFGALRARVYDDEVRKWVSDTGV 356 Query: 569 ENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDAN 390 ENIGKRLVNSR+GP FEQPKMT+EKL+EYG+MLV+EQ+NVKRVQLA+ Y+S+AALGDAN Sbjct: 357 ENIGKRLVNSREGPPEFEQPKMTIEKLIEYGYMLVKEQENVKRVQLAEQYLSEAALGDAN 416 Query: 389 QDAMKTGSFYG 357 DAMKTGSFYG Sbjct: 417 SDAMKTGSFYG 427
>RCA_MALDO (Q40281) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 437 Score = 218 bits (556), Expect = 1e-56 Identities = 101/131 (77%), Positives = 120/131 (91%) Frame = -3 Query: 749 PTRDDXIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGI 570 PTR+D IGVC GIF++DNV+ E +VK+VDTFPGQSIDFFGALRARVYDDEVRKW+ G+ Sbjct: 307 PTREDRIGVCIGIFRSDNVAKEDIVKLVDTFPGQSIDFFGALRARVYDDEVRKWITGVGV 366 Query: 569 ENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDAN 390 ++IGK+LVNS++GP TFEQPKMT+EKLLEYG+MLVQEQ+NVKRVQLAD Y+S+AALGDAN Sbjct: 367 DSIGKKLVNSKEGPPTFEQPKMTIEKLLEYGNMLVQEQENVKRVQLADKYLSEAALGDAN 426 Query: 389 QDAMKTGSFYG 357 DAM TG+FYG Sbjct: 427 SDAMNTGTFYG 437
>RCA_MAIZE (Q9ZT00) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 433 Score = 218 bits (554), Expect = 2e-56 Identities = 100/130 (76%), Positives = 120/130 (92%) Frame = -3 Query: 749 PTRDDXIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGI 570 PTR+D IGVCKGIF+TD V +E VV++VDTFPGQSIDFFGALRARVYDDEVR+WV TG+ Sbjct: 303 PTREDRIGVCKGIFRTDGVDEEHVVQLVDTFPGQSIDFFGALRARVYDDEVRRWVSETGV 362 Query: 569 ENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDAN 390 ENI ++LVNS++GP TFEQPK+T+EKLLEYGHMLV EQ+NVKRVQLAD Y+++AALG+AN Sbjct: 363 ENIARKLVNSKEGPPTFEQPKITIEKLLEYGHMLVAEQENVKRVQLADKYLNEAALGEAN 422 Query: 389 QDAMKTGSFY 360 +DAMKTGSF+ Sbjct: 423 EDAMKTGSFF 432
>RCA2_TOBAC (Q40565) Ribulose bisphosphate carboxylase/oxygenase activase 2,| chloroplast precursor (RuBisCO activase 2) (RA 2) Length = 439 Score = 217 bits (552), Expect = 4e-56 Identities = 104/129 (80%), Positives = 118/129 (91%) Frame = -3 Query: 749 PTRDDXIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGI 570 PTR+D IGVCKGIF+TDNV +E+V+KIVDTFPGQSIDFFGALRARVYDDEVRKWV TGI Sbjct: 311 PTREDRIGVCKGIFRTDNVPEEAVIKIVDTFPGQSIDFFGALRARVYDDEVRKWVSGTGI 370 Query: 569 ENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDAN 390 E IG +L+NS DGP TFEQPKMTVEKLLEYG+MLVQEQ+NVKRVQLA+TY+ +AALGDAN Sbjct: 371 EAIGDKLLNSFDGPPTFEQPKMTVEKLLEYGNMLVQEQENVKRVQLAETYLKEAALGDAN 430 Query: 389 QDAMKTGSF 363 DA+ TG+F Sbjct: 431 ADAINTGNF 439
>RCA_LYCPN (O49074) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 459 Score = 215 bits (548), Expect = 1e-55 Identities = 103/127 (81%), Positives = 118/127 (92%) Frame = -3 Query: 749 PTRDDXIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGI 570 PTR+D IGVCKGIF+TDNV +E+VVKIVD+FPGQSIDFFGALRARVYDDEVRKWV TGI Sbjct: 306 PTREDRIGVCKGIFRTDNVPEEAVVKIVDSFPGQSIDFFGALRARVYDDEVRKWVSGTGI 365 Query: 569 ENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDAN 390 E IG++L+NSRDGP TFEQPKMT+EKLLEYG+MLVQEQ+NVKRVQLA+TY+ +AALGDAN Sbjct: 366 ELIGEKLLNSRDGPPTFEQPKMTLEKLLEYGNMLVQEQENVKRVQLAETYLKEAALGDAN 425 Query: 389 QDAMKTG 369 DA+ TG Sbjct: 426 ADAINTG 432
>RCA2_LARTR (Q7X999) Ribulose bisphosphate carboxylase/oxygenase activase 2,| chloroplast precursor (RuBisCO activase 2) (RA 2) (RubisCO activase beta form) Length = 435 Score = 215 bits (547), Expect = 1e-55 Identities = 99/129 (76%), Positives = 118/129 (91%) Frame = -3 Query: 749 PTRDDXIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGI 570 PTR+D IGVCKGIF+TDNV +E +VK+VD FPGQSIDFFGALRARVYDDEVRKWV G+ Sbjct: 307 PTREDRIGVCKGIFRTDNVPEEDIVKVVDQFPGQSIDFFGALRARVYDDEVRKWVSEVGV 366 Query: 569 ENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDAN 390 + IGK+LVNS++GP TFEQPKMT++KLL+YG+MLV+EQ+NVKRVQLAD YMS+AALGDAN Sbjct: 367 DTIGKKLVNSKEGPPTFEQPKMTIDKLLQYGNMLVEEQENVKRVQLADKYMSEAALGDAN 426 Query: 389 QDAMKTGSF 363 QDA+K G+F Sbjct: 427 QDAIKRGTF 435
>RCA1_TOBAC (Q40460) Ribulose bisphosphate carboxylase/oxygenase activase 1,| chloroplast precursor (RuBisCO activase 1) (RA 1) Length = 442 Score = 211 bits (537), Expect = 2e-54 Identities = 102/130 (78%), Positives = 113/130 (86%) Frame = -3 Query: 749 PTRDDXIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGI 570 PTR+D IGVC GIF+TDNV E VVKIVD FPGQSIDFFGALRARVYDDEVRKWV TGI Sbjct: 311 PTREDRIGVCTGIFRTDNVPAEDVVKIVDNFPGQSIDFFGALRARVYDDEVRKWVSGTGI 370 Query: 569 ENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDAN 390 E IG +L+NS DGP TFEQPKMT+EKLLEYG+MLVQEQ+NVKRVQLAD Y+ +AALGDAN Sbjct: 371 EKIGDKLLNSFDGPPTFEQPKMTIEKLLEYGNMLVQEQENVKRVQLADKYLKEAALGDAN 430 Query: 389 QDAMKTGSFY 360 DA+ GSF+ Sbjct: 431 ADAINNGSFF 440
>RCA_PHAAU (O98997) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 439 Score = 206 bits (525), Expect = 5e-53 Identities = 92/130 (70%), Positives = 118/130 (90%) Frame = -3 Query: 749 PTRDDXIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGI 570 PTRDD +GVCKGIF+TD V +E + K+VDTFPGQSIDFFGALRARVYDDEVRKW+ G+ Sbjct: 309 PTRDDRVGVCKGIFRTDGVPEEDITKLVDTFPGQSIDFFGALRARVYDDEVRKWISGVGV 368 Query: 569 ENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDAN 390 + GK+LVNS++GP TF+QPKM+++KLL+YG+MLVQEQ+NVKRVQLAD Y+++AALG+AN Sbjct: 369 DATGKKLVNSKEGPPTFDQPKMSLDKLLQYGNMLVQEQENVKRVQLADKYLNEAALGNAN 428 Query: 389 QDAMKTGSFY 360 +DA+K+GSF+ Sbjct: 429 EDAIKSGSFF 438
>RCA_PHAVU (O64981) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 441 Score = 198 bits (503), Expect = 2e-50 Identities = 89/130 (68%), Positives = 116/130 (89%) Frame = -3 Query: 749 PTRDDXIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGI 570 PTR+D IGVCKGIF+TD V ++ +V++VD PGQSIDFFGALRARVYDDEVRKW+ G+ Sbjct: 311 PTREDRIGVCKGIFRTDGVPEKDIVELVDKHPGQSIDFFGALRARVYDDEVRKWISGVGV 370 Query: 569 ENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDAN 390 +++GK+LVNS++GP TF+QPKMT++KLL Y MLVQEQ+NVKRVQLAD Y+++AALG+AN Sbjct: 371 DSVGKKLVNSKEGPPTFDQPKMTLDKLLLYASMLVQEQENVKRVQLADQYLNEAALGNAN 430 Query: 389 QDAMKTGSFY 360 +DA+K+GSF+ Sbjct: 431 EDAIKSGSFF 440
>RCA_CUCSA (Q01587) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 413 Score = 167 bits (422), Expect = 4e-41 Identities = 77/106 (72%), Positives = 91/106 (85%) Frame = -3 Query: 749 PTRDDXIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGI 570 PTR+D IG+C GIF+TD V E +VK+VDTFPGQSIDFFGALRARVYDDEVRKW G+ Sbjct: 304 PTREDRIGICTGIFRTDGVPFEDIVKLVDTFPGQSIDFFGALRARVYDDEVRKWAVGVGV 363 Query: 569 ENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQL 432 E IG+ LVNS++ P TF+QPKMT+EKLLEYG+MLV EQ+NVKRV+L Sbjct: 364 ERIGRNLVNSKESPPTFDQPKMTIEKLLEYGNMLVMEQENVKRVKL 409
>RCA_CHLRE (P23489) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 408 Score = 142 bits (359), Expect = 9e-34 Identities = 71/116 (61%), Positives = 86/116 (74%) Frame = -3 Query: 749 PTRDDXIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGI 570 PTR+D IGVC GIFQ DNV V +VDTFPGQSIDFFGALRARVYDD VR+W+ TG+ Sbjct: 280 PTREDRIGVCMGIFQEDNVQRREVENLVDTFPGQSIDFFGALRARVYDDMVRQWITDTGV 339 Query: 569 ENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAAL 402 + IG++LVN+R V + M + L++YG LV EQ+NVKRVQLAD Y+S A L Sbjct: 340 DKIGQQLVNARQ-KVAMPKVSMDLNVLIKYGKSLVDEQENVKRVQLADAYLSGAEL 394
>RCA_ANASC (Q06721) Ribulose bisphosphate carboxylase/oxygenase activase| (RuBisCO activase) (RA) Length = 415 Score = 110 bits (276), Expect = 4e-24 Identities = 49/110 (44%), Positives = 73/110 (66%) Frame = -3 Query: 749 PTRDDXIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGI 570 P RD+ +G+ GIF D +S V K+VD+FP QSIDFF ALR+R+YD+++R ++ G Sbjct: 180 PHRDEKVGIVGGIFAEDGLSQRDVEKLVDSFPNQSIDFFSALRSRIYDEQIRDFIHQVGY 239 Query: 569 ENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTY 420 EN+ R+VNS +GP F++P T+ L+E + +V EQ ++ QL D Y Sbjct: 240 ENVSLRVVNSLEGPPAFKKPDFTLSHLIESANFMVAEQKRIETSQLVDEY 289
>RCA_ANASP (P58555) Ribulose bisphosphate carboxylase/oxygenase activase| (RuBisCO activase) (RA) Length = 414 Score = 105 bits (262), Expect = 2e-22 Identities = 48/110 (43%), Positives = 71/110 (64%) Frame = -3 Query: 749 PTRDDXIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGI 570 P RDD +G+ GIF D +S + ++VDTFP QSIDFF ALR+R+YD ++R ++ G Sbjct: 180 PNRDDKVGIVGGIFAEDGLSQREIEQLVDTFPKQSIDFFSALRSRIYDIQIRDFIHKVGF 239 Query: 569 ENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTY 420 E I R+VNS + P F++P ++ L+E G++++ EQ V QL D Y Sbjct: 240 ERISLRVVNSLEAPPEFKKPDFSLAHLIESGNLVLGEQQRVDNSQLVDEY 289
>RCA_POPEU (P84562) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast (RuBisCO activase) (RA) (Fragments) Length = 32 Score = 47.0 bits (110), Expect = 6e-05 Identities = 27/60 (45%), Positives = 30/60 (50%) Frame = -3 Query: 671 IVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEK 492 +VDTFPGQSIDFFGAL R+GP TFEQP MT+EK Sbjct: 1 LVDTFPGQSIDFFGAL----------------------------REGPPTFEQPAMTIEK 32
>ACSL4_MOUSE (Q9QUJ7) Long-chain-fatty-acid--CoA ligase 4 (EC 6.2.1.3)| (Long-chain acyl-CoA synthetase 4) (LACS 4) (mACS4) Length = 711 Score = 31.6 bits (70), Expect = 2.8 Identities = 16/42 (38%), Positives = 25/42 (59%) Frame = -3 Query: 167 VNISLNILSIPIWQRPIHLLIICHSQYSFLQWRLLLLCCKQN 42 +N+ LN+L+I + P+HLLI +S F+ W L K+N Sbjct: 1 MNLKLNVLTIILL--PVHLLITIYSALIFIPWYFLTNAKKKN 40
>ZDH23_HUMAN (Q8IYP9) Probable palmitoyltransferase ZDHHC23 (EC 2.3.1.-) (Zinc| finger DHHC domain-containing protein 23) (DHHC-23) Length = 409 Score = 30.8 bits (68), Expect = 4.7 Identities = 18/64 (28%), Positives = 25/64 (39%), Gaps = 1/64 (1%) Frame = +1 Query: 319 PSGTGKVPCCAPLP*KEPVFIASWLASPRAAWLM*VSASCT-RLTLSCSWTSMCPYSSSF 495 P G+ K+P +P KE L P AW + C R+ C W + C S+ Sbjct: 242 PKGSSKMPAGSPTKAKEDWCAKCQLVRPARAWRCRICGICVRRMDHHCVWINSCVGESNH 301 Query: 496 STVI 507 I Sbjct: 302 QAFI 305
>YNEI_ECOLI (P76149) Aldehyde dehydrogenase-like protein yneI (EC 1.2.1.-)| Length = 462 Score = 30.4 bits (67), Expect = 6.2 Identities = 14/42 (33%), Positives = 23/42 (54%) Frame = +3 Query: 588 PLAHLIVVHPSTQSTEKVNGLSWEGVDDLDDRLVTDIVGLED 713 P H I ++P+T E+++ L W G DD+++ L G D Sbjct: 5 PATHAISINPATG--EQLSVLPWAGADDIENALQLAAAGFRD 44
>LEPA_HELPY (O25122) GTP-binding protein lepA| Length = 602 Score = 30.4 bits (67), Expect = 6.2 Identities = 20/79 (25%), Positives = 37/79 (46%) Frame = -3 Query: 674 KIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVE 495 KI+ T P S DF L+A +YD ++G+ LV DG + EQ + + Sbjct: 180 KIITTIPAPSGDFNAPLKALIYDSWFDNYLGALA-------LVRIMDGSINTEQEILVMG 232 Query: 494 KLLEYGHMLVQEQDNVKRV 438 ++G + + + +K++ Sbjct: 233 TGKKHGVLGLYYPNPLKKI 251
>GP116_HUMAN (Q8IZF2) Probable G-protein coupled receptor 116 precursor| Length = 1346 Score = 30.0 bits (66), Expect = 8.0 Identities = 14/35 (40%), Positives = 21/35 (60%) Frame = +1 Query: 424 VSASCTRLTLSCSWTSMCPYSSSFSTVIFGCSKVT 528 + +SC+R TL T CP SS +TVI+ C ++ Sbjct: 420 IDSSCSRYTLKADGTQ-CPSGSSGTTVIYTCEFIS 453 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 100,643,308 Number of Sequences: 219361 Number of extensions: 2061098 Number of successful extensions: 6030 Number of sequences better than 10.0: 24 Number of HSP's better than 10.0 without gapping: 5807 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6027 length of database: 80,573,946 effective HSP length: 109 effective length of database: 56,663,597 effective search space used: 7932903580 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
