Clone Name	rbaal16m03
Clone Library Name	barley_pub

---

No.	Definition	Score (bits)	E Value
1	ref|XM_472335.1| Oryza sativa (japonica cultivar-group), predic...	502	e-139
2	dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D...	502	e-139
3	dbj|AK058510.1| Oryza sativa (japonica cultivar-group) cDNA clon...	502	e-139
4	emb|AL731591.3|OSJN00240 Oryza sativa genomic DNA, chromosome 4,...	502	e-139
5	dbj|D29692.1|RICYK4 Oryza sativa mRNA, partial homologous to ATP...	280	5e-72
6	dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D...	176	6e-41
7	gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome...	176	6e-41
8	emb|AL928782.4|CNS08CCC Oryza sativa chromosome 12, . BAC OSJNBb...	176	6e-41
9	emb|BX842241.1|CNS0B0PM Oryza sativa chromosome 12, . Partial se...	176	6e-41
10	dbj|AK066153.1| Oryza sativa (japonica cultivar-group) cDNA clon...	168	1e-38
11	gb|M32604.1|TOMCD4B Tomato ATP-dependent protease (CD4B) gene, c...	161	3e-36
12	gb|M32603.1|TOMCD4A Tomato ATP-dependent protease (CD4A) gene, c...	141	3e-30
13	gb|AY108805.1| Zea mays PCO077883 mRNA sequence	131	3e-27
14	dbj|AP006392.1| Lotus japonicus genomic DNA, chromosome 4, clone...	131	3e-27
15	dbj|AP006098.1| Lotus japonicus genomic DNA, chromosome 4, clone...	131	3e-27
16	gb|L09547.1|PEAPCLP Pisum sativum (clone pCLp) nuclear encoded p...	119	1e-23
17	gb|AC126794.15| Medicago truncatula clone mth2-24j7, complete se...	111	3e-21
18	gb|AF043539.1|AF043539 Spinacia oleracea ClpC protease (clpC) mR...	105	2e-19
19	ref|NM_114746.2| Arabidopsis thaliana ATCLPC; ATP binding / ATPa...	100	1e-17
20	emb|AL132963.1|ATT21J18 Arabidopsis thaliana DNA chromosome 3, B...	100	1e-17
21	gb|AY056787.1| Arabidopsis thaliana AT3g48870/T21J18_140 mRNA, c...	100	1e-17
22	dbj|AB022324.1| Arabidopsis thaliana mRNA for AtClpC, complete cds	100	1e-17
23	gb|AF053562.1|AF053562 Mesembryanthemum crystallinum ATP-depende...	86	2e-13
24	gb|AF022909.1| Arabidopsis thaliana ClpC mRNA, nuclear gene enco...	70	1e-08
25	ref|NM_124471.2| Arabidopsis thaliana CLPC; ATP binding / ATPase...	62	2e-06
26	gb|AY102125.1| Arabidopsis thaliana AT5g50920/K3K7_7 mRNA, compl...	62	2e-06
27	dbj|AK220924.1| Arabidopsis thaliana mRNA for ATP-dependent Clp ...	62	2e-06
28	emb|BX830850.1|CNS0A0O2 Arabidopsis thaliana Full-length cDNA Co...	62	2e-06
29	dbj|AB017063.1| Arabidopsis thaliana genomic DNA, chromosome 5, ...	62	2e-06
30	gb|AC135498.3| Oryza sativa (japonica cultivar-group) chromosome...	46	0.14
31	emb|Z73073.1|SCYGR288W S.cerevisiae chromosome VII reading frame...	46	0.14
32	dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D...	46	0.14
33	emb|Z73074.1|SCYGR289C S.cerevisiae chromosome VII reading frame...	46	0.14
34	emb|X94332.1|SCCHVIIRA S.cerevisiae DNA for fragment from chromo...	46	0.14
35	gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome...	46	0.14
36	ref|NM_128071.2| Arabidopsis thaliana ATP binding / ATPase/ nucl...	44	0.56
37	ref|XM_976295.1| PREDICTED: Mus musculus RIKEN cDNA 4932431H17 g...	44	0.56
38	ref|XM_619904.3| PREDICTED: Mus musculus RIKEN cDNA 4932431H17 g...	44	0.56
39	ref|XM_915991.2| PREDICTED: Mus musculus RIKEN cDNA 4932431H17 g...	44	0.56
40	emb|CR352307.11| Zebrafish DNA sequence from clone DKEY-81P21 in...	44	0.56
41	dbj|AK133299.1| Mus musculus adult male testis cDNA, RIKEN full-...	44	0.56
42	gb|AY070722.1| Arabidopsis thaliana At2g25140/F13D4.100 mRNA, co...	44	0.56
43	gb|AC119873.38| Mus musculus chromosome 3, clone RP24-275F18, co...	44	0.56
44	gb|BT002223.1| Arabidopsis thaliana At2g25140/F13D4.100 mRNA, co...	44	0.56
45	emb|AL162596.30| Human DNA sequence from clone RP1-13P20 on chro...	42	2.2
46	emb|Z97336.1|ATFCA1 Arabidopsis thaliana DNA chromosome 4, ESSA ...	42	2.2
47	emb|AL161539.2|ATCHRIV39 Arabidopsis thaliana DNA chromosome 4, ...	42	2.2
48	gb|DQ397597.1| Cenarchaeum symbiosum clone C05G09, complete sequ...	42	2.2
49	dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co...	42	2.2
50	gb|U59738.1|ATU59738 Arabidopsis thaliana ATP sulfurylase (APS3)...	42	2.2
51	dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome	42	2.2
52	gb|M17917.1|HUMIR3EB1 Human DNA with homology to EBV IR3 repeat,...	42	2.2
53	gb|AC123698.15| Mus musculus chromosome 15, clone RP23-331P14, c...	40	8.8
54	ref|XM_863711.1| Aspergillus nidulans FGSC A4 hypothetical prote...	40	8.8
55	gb|AC142227.3| Mus musculus BAC clone RP24-115G21 from chromosom...	40	8.8
56	emb|AJ965256.1| Dehalococcoides sp. CBDB1 complete genome	40	8.8
57	gb|AC127568.4| Mus musculus BAC clone RP24-215P13 from chromosom...	40	8.8
58	gb|AC125535.4| Mus musculus BAC clone RP24-69I6 from chromosome ...	40	8.8
59	gb|AC122829.4| Mus musculus BAC clone RP23-224F12 from 10, compl...	40	8.8
60	gb|AC107801.14| Mus musculus, clone RP23-29M6, complete sequence	40	8.8
61	emb|AL353704.10| Human DNA sequence from clone RP11-551M15 on ch...	40	8.8
62	ref|XM_784682.1| PREDICTED: Strongylocentrotus purpuratus simila...	40	8.8
63	emb|AL138751.18| Human DNA sequence from clone RP11-346E17 on ch...	40	8.8
64	ref|XM_787522.1| PREDICTED: Strongylocentrotus purpuratus simila...	40	8.8
65	emb|Y07826.2|TTDNAKOPN T.thermophilus DnaK operon	40	8.8
66	emb|AL646051.19| Mouse DNA sequence from clone RP23-222M22 on ch...	40	8.8
67	gb|AC165148.2| Mus musculus BAC clone RP24-278K24 from chromosom...	40	8.8
68	emb|CR384108.7| Zebrafish DNA sequence from clone DKEYP-26H11 in...	40	8.8
69	gb|AC012516.15| Homo sapiens 3 BAC RP11-99A5 (Roswell Park Cance...	40	8.8
70	emb|CR388079.8| Zebrafish DNA sequence from clone DKEY-29F21 in ...	40	8.8
71	gb|AC073369.5| Homo sapiens chromosome 10 clone RP11-466H6, comp...	40	8.8
72	emb|CR386125.1| Gallus gallus finished cDNA, clone ChEST319m22	40	8.8
73	gb|AC161117.4| Mus musculus BAC clone RP24-146I24 from chromosom...	40	8.8
74	dbj|AK048774.1| Mus musculus 0 day neonate cerebellum cDNA, RIKE...	40	8.8
75	emb|BX931631.2| Gallus gallus finished cDNA, clone ChEST406h3	40	8.8
76	gb|AC078955.25| Homo sapiens 12 BAC RP11-543H12 (Roswell Park Ca...	40	8.8
77	dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete g...	40	8.8
78	emb|BX510327.10| Zebrafish DNA sequence from clone CH211-253J24 ...	40	8.8
79	emb|BX537133.3| Zebrafish DNA sequence from clone DKEY-90M5 in l...	40	8.8
80	gb|AC149277.11| Mus musculus BAC clone RP24-213J23 from chromoso...	40	8.8
81	gb|U29376.1| Caenorhabditis elegans cosmid E01H11, complete sequ...	40	8.8
82	gb|AE017221.1| Thermus thermophilus HB27, complete genome	40	8.8
83	emb|CT030233.6| Mouse DNA sequence from clone RP24-103C16 on chr...	40	8.8
84	gb|AC141328.4| Mus musculus BAC clone RP23-204P22 from 6, comple...	40	8.8
85	gb|AC161461.5| Mus musculus BAC clone RP23-104L7 from chromosome...	40	8.8
86	emb|AL844166.6| Mouse DNA sequence from clone RP23-107K21 on chr...	40	8.8
87	dbj|AB012390.1| Thermus thermophilus genes for DnaK, GrpE, DnaJ,...	40	8.8
88	dbj|AB032368.1| Thermus thermophilus clpB, dafA, dnaJ, grpE, dna...	40	8.8

---

>ref|XM_472335.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2667

 Score =  502 bits (253), Expect = e-139
 Identities = 391/437 (89%)
 Strand = Plus / Minus

                                                                        
Query: 207  cactcagggcaggcgccagcggctctgcaataccactcccactgttgagaaccaccacct 266
            ||||||| ||||| ||||| || || | || |||||| |||| ||| ||||| | |||||
Sbjct: 2662 cactcagagcaggtgccagtggttccggaacaccactaccaccgttaagaactatcacct 2603

                                                                        
Query: 267  taccatctgaatccacatcaacaatagcagaatcaccttccttgacctcgccagccagca 326
            | || |||||||||||||||||||||||||| ||||||||||||||||||||||||| ||
Sbjct: 2602 tgccctctgaatccacatcaacaatagcagagtcaccttccttgacctcgccagccaaca 2543

                                                                        
Query: 327  tcttctccgcgaggctgtcttccaaaagcctcataatagcccgtcgcagaggcctggcac 386
            |||||||||| | |||||| |||| ||||||||||||||| || ||||||||||||||||
Sbjct: 2542 tcttctccgccaagctgtcctccagaagcctcataatagcacgccgcagaggcctggcac 2483

                                                                        
Query: 387  catagcttgggttgtaaccctcgtcgacaactctatcccggaacttctctgttacctgga 446
            ||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||
Sbjct: 2482 catagcttgggttgtaaccttcgtcgacaactctatcccggaacttctctgtcacctgga 2423

                                                                        
Query: 447  ggtctatttcctttgccttgagcctgtcaaacacctctttgagcataatatcagctatct 506
            |||| || |||||||||||||||||||||||||| |||||||||||||||||||| ||||
Sbjct: 2422 ggtcgatgtcctttgccttgagcctgtcaaacacttctttgagcataatatcagcaatct 2363

                                                                        
Query: 507  ctttcacctccaacttagtcagctgcctgaacacaatcatctcatccaatctgttcaaga 566
            | || ||||||| ||| || ||||||| ||||||||||||||| ||||||||||| ||||
Sbjct: 2362 ccttaacctccagcttggtaagctgccggaacacaatcatctcgtccaatctgtttaaga 2303

                                                                        
Query: 567  actcaggcctgaaatactgcttcaactcctcggtcaccaagctcttgatcctgttatagc 626
            ||||||| | ||| |||||||||| ||| || |||||||||||||| ||||| || ||||
Sbjct: 2302 actcaggtcggaagtactgcttcagctcttcagtcaccaagctcttaatcctattgtagc 2243

                             
Query: 627  tggtatctttctcatca 643
            |||| ||||||||||||
Sbjct: 2242 tggtgtctttctcatca 2226

---

>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score =  502 bits (253), Expect = e-139
 Identities = 391/437 (89%)
 Strand = Plus / Plus

                                                                            
Query: 207      cactcagggcaggcgccagcggctctgcaataccactcccactgttgagaaccaccacct 266
                ||||||| ||||| ||||| || || | || |||||| |||| ||| ||||| | |||||
Sbjct: 19610375 cactcagagcaggtgccagtggttccggaacaccactaccaccgttaagaactatcacct 19610434

                                                                            
Query: 267      taccatctgaatccacatcaacaatagcagaatcaccttccttgacctcgccagccagca 326
                | || |||||||||||||||||||||||||| ||||||||||||||||||||||||| ||
Sbjct: 19610435 tgccctctgaatccacatcaacaatagcagagtcaccttccttgacctcgccagccaaca 19610494

                                                                            
Query: 327      tcttctccgcgaggctgtcttccaaaagcctcataatagcccgtcgcagaggcctggcac 386
                |||||||||| | |||||| |||| ||||||||||||||| || ||||||||||||||||
Sbjct: 19610495 tcttctccgccaagctgtcctccagaagcctcataatagcacgccgcagaggcctggcac 19610554

                                                                            
Query: 387      catagcttgggttgtaaccctcgtcgacaactctatcccggaacttctctgttacctgga 446
                ||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||
Sbjct: 19610555 catagcttgggttgtaaccttcgtcgacaactctatcccggaacttctctgtcacctgga 19610614

                                                                            
Query: 447      ggtctatttcctttgccttgagcctgtcaaacacctctttgagcataatatcagctatct 506
                |||| || |||||||||||||||||||||||||| |||||||||||||||||||| ||||
Sbjct: 19610615 ggtcgatgtcctttgccttgagcctgtcaaacacttctttgagcataatatcagcaatct 19610674

                                                                            
Query: 507      ctttcacctccaacttagtcagctgcctgaacacaatcatctcatccaatctgttcaaga 566
                | || ||||||| ||| || ||||||| ||||||||||||||| ||||||||||| ||||
Sbjct: 19610675 ccttaacctccagcttggtaagctgccggaacacaatcatctcgtccaatctgtttaaga 19610734

                                                                            
Query: 567      actcaggcctgaaatactgcttcaactcctcggtcaccaagctcttgatcctgttatagc 626
                ||||||| | ||| |||||||||| ||| || |||||||||||||| ||||| || ||||
Sbjct: 19610735 actcaggtcggaagtactgcttcagctcttcagtcaccaagctcttaatcctattgtagc 19610794

                                 
Query: 627      tggtatctttctcatca 643
                |||| ||||||||||||
Sbjct: 19610795 tggtgtctttctcatca 19610811

---

>dbj|AK058510.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-016-G07, full
            insert sequence
          Length = 1527

 Score =  502 bits (253), Expect = e-139
 Identities = 391/437 (89%)
 Strand = Plus / Minus

                                                                        
Query: 207  cactcagggcaggcgccagcggctctgcaataccactcccactgttgagaaccaccacct 266
            ||||||| ||||| ||||| || || | || |||||| |||| ||| ||||| | |||||
Sbjct: 1212 cactcagagcaggtgccagtggttccggaacaccactaccaccgttaagaactatcacct 1153

                                                                        
Query: 267  taccatctgaatccacatcaacaatagcagaatcaccttccttgacctcgccagccagca 326
            | || |||||||||||||||||||||||||| ||||||||||||||||||||||||| ||
Sbjct: 1152 tgccctctgaatccacatcaacaatagcagagtcaccttccttgacctcgccagccaaca 1093

                                                                        
Query: 327  tcttctccgcgaggctgtcttccaaaagcctcataatagcccgtcgcagaggcctggcac 386
            |||||||||| | |||||| |||| ||||||||||||||| || ||||||||||||||||
Sbjct: 1092 tcttctccgccaagctgtcctccagaagcctcataatagcacgccgcagaggcctggcac 1033

                                                                        
Query: 387  catagcttgggttgtaaccctcgtcgacaactctatcccggaacttctctgttacctgga 446
            ||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||
Sbjct: 1032 catagcttgggttgtaaccttcgtcgacaactctatcccggaacttctctgtcacctgga 973

                                                                        
Query: 447  ggtctatttcctttgccttgagcctgtcaaacacctctttgagcataatatcagctatct 506
            |||| || |||||||||||||||||||||||||| |||||||||||||||||||| ||||
Sbjct: 972  ggtcgatgtcctttgccttgagcctgtcaaacacttctttgagcataatatcagcaatct 913

                                                                        
Query: 507  ctttcacctccaacttagtcagctgcctgaacacaatcatctcatccaatctgttcaaga 566
            | || ||||||| ||| || ||||||| ||||||||||||||| ||||||||||| ||||
Sbjct: 912  ccttaacctccagcttggtaagctgccggaacacaatcatctcgtccaatctgtttaaga 853

                                                                        
Query: 567  actcaggcctgaaatactgcttcaactcctcggtcaccaagctcttgatcctgttatagc 626
            ||||||| | ||| |||||||||| ||| || |||||||||||||| ||||| || ||||
Sbjct: 852  actcaggtcggaagtactgcttcagctcttcagtcaccaagctcttaatcctattgtagc 793

                             
Query: 627  tggtatctttctcatca 643
            |||| ||||||||||||
Sbjct: 792  tggtgtctttctcatca 776

---

>emb|AL731591.3|OSJN00240 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0039C07,
             complete sequence
          Length = 166410

 Score =  502 bits (253), Expect = e-139
 Identities = 391/437 (89%)
 Strand = Plus / Plus

                                                                         
Query: 207   cactcagggcaggcgccagcggctctgcaataccactcccactgttgagaaccaccacct 266
             ||||||| ||||| ||||| || || | || |||||| |||| ||| ||||| | |||||
Sbjct: 61101 cactcagagcaggtgccagtggttccggaacaccactaccaccgttaagaactatcacct 61160

                                                                         
Query: 267   taccatctgaatccacatcaacaatagcagaatcaccttccttgacctcgccagccagca 326
             | || |||||||||||||||||||||||||| ||||||||||||||||||||||||| ||
Sbjct: 61161 tgccctctgaatccacatcaacaatagcagagtcaccttccttgacctcgccagccaaca 61220

                                                                         
Query: 327   tcttctccgcgaggctgtcttccaaaagcctcataatagcccgtcgcagaggcctggcac 386
             |||||||||| | |||||| |||| ||||||||||||||| || ||||||||||||||||
Sbjct: 61221 tcttctccgccaagctgtcctccagaagcctcataatagcacgccgcagaggcctggcac 61280

                                                                         
Query: 387   catagcttgggttgtaaccctcgtcgacaactctatcccggaacttctctgttacctgga 446
             ||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||
Sbjct: 61281 catagcttgggttgtaaccttcgtcgacaactctatcccggaacttctctgtcacctgga 61340

                                                                         
Query: 447   ggtctatttcctttgccttgagcctgtcaaacacctctttgagcataatatcagctatct 506
             |||| || |||||||||||||||||||||||||| |||||||||||||||||||| ||||
Sbjct: 61341 ggtcgatgtcctttgccttgagcctgtcaaacacttctttgagcataatatcagcaatct 61400

                                                                         
Query: 507   ctttcacctccaacttagtcagctgcctgaacacaatcatctcatccaatctgttcaaga 566
             | || ||||||| ||| || ||||||| ||||||||||||||| ||||||||||| ||||
Sbjct: 61401 ccttaacctccagcttggtaagctgccggaacacaatcatctcgtccaatctgtttaaga 61460

                                                                         
Query: 567   actcaggcctgaaatactgcttcaactcctcggtcaccaagctcttgatcctgttatagc 626
             ||||||| | ||| |||||||||| ||| || |||||||||||||| ||||| || ||||
Sbjct: 61461 actcaggtcggaagtactgcttcagctcttcagtcaccaagctcttaatcctattgtagc 61520

                              
Query: 627   tggtatctttctcatca 643
             |||| ||||||||||||
Sbjct: 61521 tggtgtctttctcatca 61537

---

>dbj|D29692.1|RICYK4 Oryza sativa mRNA, partial homologous to ATP-dependent protease
           gene
          Length = 349

 Score =  280 bits (141), Expect = 5e-72
 Identities = 212/236 (89%)
 Strand = Plus / Minus

                                                                       
Query: 408 cgtcgacaactctatcccggaacttctctgttacctggaggtctatttcctttgccttga 467
           |||||||||||||| |||||||||||||||| ||||||||||| || |||||||||||||
Sbjct: 349 cgtcgacaactctancccggaacttctctgtcacctggaggtcgatgtcctttgccttga 290

                                                                       
Query: 468 gcctgtcaaacacctctttgagcataatatcagctatctctttcacctccaacttagtca 527
           ||||||||||||| |||||||||||||||||||| ||||| || ||||||| ||| || |
Sbjct: 289 gcctgtcaaacacttctttgagcataatatcagcaatctccttaacctccagcttggtaa 230

                                                                       
Query: 528 gctgcctgaacacaatcatctcatccaatctgttcaagaactcaggcctgaaatactgct 587
           |||||| ||||||||||||||| ||||||||||| ||||||||||| | ||| |||||||
Sbjct: 229 gctgccggaacacaatcatctcgtccaatctgtttaagaactcaggtcggaagtactgct 170

                                                                   
Query: 588 tcaactcctcggtcaccaagctcttgatcctgttatagctggtatctttctcatca 643
           ||| ||| || |||||||||||||| ||||| || |||||||| ||||||||||||
Sbjct: 169 tcagctcttcagtcaccaagctcttaatcctattgtagctggtgtctttctcatca 114

---

>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score =  176 bits (89), Expect = 6e-41
 Identities = 308/381 (80%)
 Strand = Plus / Plus

                                                                           
Query: 262     caccttaccatctgaatccacatcaacaatagcagaatcaccttccttgacctcgccagc 321
               |||||| || || ||||||||||| ||||| ||||||||||| ||||| ||||| |||||
Sbjct: 7095141 caccttcccctcggaatccacatcgacaatggcagaatcaccctccttcacctccccagc 7095200

                                                                           
Query: 322     cagcatcttctccgcgaggctgtcttccaaaagcctcataatagcccgtcgcagaggcct 381
                ||||||||||||||||||||||| ||||  |||||||| || ||||  |  || |||||
Sbjct: 7095201 tagcatcttctccgcgaggctgtcctccaggagcctcatgatggccctccttagcggcct 7095260

                                                                           
Query: 382     ggcaccatagcttgggttgtaaccctcgtcgacaactctatcccggaacttctctgttac 441
                ||||||||||| |||||| | || ||||| || |  |  |||  ||||||||| || ||
Sbjct: 7095261 cgcaccatagctcgggttgaagccttcgtcaacgatacgctccttgaacttctcggtgac 7095320

                                                                           
Query: 442     ctggaggtctatttcctttgccttgagcctgtcaaacacctctttgagcataatatcagc 501
               ||||||||| || ||||| ||||||||||||||||| ||||| |||||||| || || ||
Sbjct: 7095321 ctggaggtcaatgtccttggccttgagcctgtcaaagacctccttgagcatgatctcggc 7095380

                                                                           
Query: 502     tatctctttcacctccaacttagtcagctgcctgaacacaatcatctcatccaatctgtt 561
                ||||| || ||||||| ||| || || |||||||| || |||||||| || |  | |||
Sbjct: 7095381 gatctccttgacctccagcttggtgagttgcctgaagacgatcatctcgtcgagacggtt 7095440

                                                                           
Query: 562     caagaactcaggcctgaaatactgcttcaactcctcggtcaccaagctcttgatcctgtt 621
                | |||||| || | ||| |||||||||| |||||||   || | ||||||||||||| |
Sbjct: 7095441 gaggaactcggggcggaagtactgcttcatctcctcgacgacaaggctcttgatcctgct 7095500

                                    
Query: 622     atagctggtatctttctcatc 642
                |||||| | || ||||||||
Sbjct: 7095501 gtagctgctgtccttctcatc 7095521

---

>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score =  176 bits (89), Expect = 6e-41
 Identities = 308/381 (80%)
 Strand = Plus / Plus

                                                                           
Query: 262     caccttaccatctgaatccacatcaacaatagcagaatcaccttccttgacctcgccagc 321
               |||||| || || ||||||||||| ||||| ||||||||||| ||||| ||||| |||||
Sbjct: 7095020 caccttcccctcggaatccacatcgacaatggcagaatcaccctccttcacctccccagc 7095079

                                                                           
Query: 322     cagcatcttctccgcgaggctgtcttccaaaagcctcataatagcccgtcgcagaggcct 381
                ||||||||||||||||||||||| ||||  |||||||| || ||||  |  || |||||
Sbjct: 7095080 tagcatcttctccgcgaggctgtcctccaggagcctcatgatggccctccttagcggcct 7095139

                                                                           
Query: 382     ggcaccatagcttgggttgtaaccctcgtcgacaactctatcccggaacttctctgttac 441
                ||||||||||| |||||| | || ||||| || |  |  |||  ||||||||| || ||
Sbjct: 7095140 cgcaccatagctcgggttgaagccttcgtcaacgatacgctccttgaacttctcggtgac 7095199

                                                                           
Query: 442     ctggaggtctatttcctttgccttgagcctgtcaaacacctctttgagcataatatcagc 501
               ||||||||| || ||||| ||||||||||||||||| ||||| |||||||| || || ||
Sbjct: 7095200 ctggaggtcaatgtccttggccttgagcctgtcaaagacctccttgagcatgatctcggc 7095259

                                                                           
Query: 502     tatctctttcacctccaacttagtcagctgcctgaacacaatcatctcatccaatctgtt 561
                ||||| || ||||||| ||| || || |||||||| || |||||||| || |  | |||
Sbjct: 7095260 gatctccttgacctccagcttggtgagttgcctgaagacgatcatctcgtcgagacggtt 7095319

                                                                           
Query: 562     caagaactcaggcctgaaatactgcttcaactcctcggtcaccaagctcttgatcctgtt 621
                | |||||| || | ||| |||||||||| |||||||   || | ||||||||||||| |
Sbjct: 7095320 gaggaactcggggcggaagtactgcttcatctcctcgacgacaaggctcttgatcctgct 7095379

                                    
Query: 622     atagctggtatctttctcatc 642
                |||||| | || ||||||||
Sbjct: 7095380 gtagctgctgtccttctcatc 7095400

---

>emb|AL928782.4|CNS08CCC Oryza sativa chromosome 12, . BAC OSJNBb0069I24 of library OSJNBb from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 68450

 Score =  176 bits (89), Expect = 6e-41
 Identities = 308/381 (80%)
 Strand = Plus / Plus

                                                                         
Query: 262   caccttaccatctgaatccacatcaacaatagcagaatcaccttccttgacctcgccagc 321
             |||||| || || ||||||||||| ||||| ||||||||||| ||||| ||||| |||||
Sbjct: 62827 caccttcccctcggaatccacatcgacaatggcagaatcaccctccttcacctccccagc 62886

                                                                         
Query: 322   cagcatcttctccgcgaggctgtcttccaaaagcctcataatagcccgtcgcagaggcct 381
              ||||||||||||||||||||||| ||||  |||||||| || ||||  |  || |||||
Sbjct: 62887 tagcatcttctccgcgaggctgtcctccaggagcctcatgatggccctccttagcggcct 62946

                                                                         
Query: 382   ggcaccatagcttgggttgtaaccctcgtcgacaactctatcccggaacttctctgttac 441
              ||||||||||| |||||| | || ||||| || |  |  |||  ||||||||| || ||
Sbjct: 62947 cgcaccatagctcgggttgaagccttcgtcaacgatacgctccttgaacttctcggtgac 63006

                                                                         
Query: 442   ctggaggtctatttcctttgccttgagcctgtcaaacacctctttgagcataatatcagc 501
             ||||||||| || ||||| ||||||||||||||||| ||||| |||||||| || || ||
Sbjct: 63007 ctggaggtcaatgtccttggccttgagcctgtcaaagacctccttgagcatgatctcggc 63066

                                                                         
Query: 502   tatctctttcacctccaacttagtcagctgcctgaacacaatcatctcatccaatctgtt 561
              ||||| || ||||||| ||| || || |||||||| || |||||||| || |  | |||
Sbjct: 63067 gatctccttgacctccagcttggtgagttgcctgaagacgatcatctcgtcgagacggtt 63126

                                                                         
Query: 562   caagaactcaggcctgaaatactgcttcaactcctcggtcaccaagctcttgatcctgtt 621
              | |||||| || | ||| |||||||||| |||||||   || | ||||||||||||| |
Sbjct: 63127 gaggaactcggggcggaagtactgcttcatctcctcgacgacaaggctcttgatcctgct 63186

                                  
Query: 622   atagctggtatctttctcatc 642
              |||||| | || ||||||||
Sbjct: 63187 gtagctgctgtccttctcatc 63207

---

>emb|BX842241.1|CNS0B0PM Oryza sativa chromosome 12, . Partial sequence from chromosome 12 of
            cultivar Nipponbare of ssp. japonica of Oryza sativa
            (rice), complete sequence
          Length = 45687

 Score =  176 bits (89), Expect = 6e-41
 Identities = 308/381 (80%)
 Strand = Plus / Plus

                                                                        
Query: 262  caccttaccatctgaatccacatcaacaatagcagaatcaccttccttgacctcgccagc 321
            |||||| || || ||||||||||| ||||| ||||||||||| ||||| ||||| |||||
Sbjct: 3441 caccttcccctcggaatccacatcgacaatggcagaatcaccctccttcacctccccagc 3500

                                                                        
Query: 322  cagcatcttctccgcgaggctgtcttccaaaagcctcataatagcccgtcgcagaggcct 381
             ||||||||||||||||||||||| ||||  |||||||| || ||||  |  || |||||
Sbjct: 3501 tagcatcttctccgcgaggctgtcctccaggagcctcatgatggccctccttagcggcct 3560

                                                                        
Query: 382  ggcaccatagcttgggttgtaaccctcgtcgacaactctatcccggaacttctctgttac 441
             ||||||||||| |||||| | || ||||| || |  |  |||  ||||||||| || ||
Sbjct: 3561 cgcaccatagctcgggttgaagccttcgtcaacgatacgctccttgaacttctcggtgac 3620

                                                                        
Query: 442  ctggaggtctatttcctttgccttgagcctgtcaaacacctctttgagcataatatcagc 501
            ||||||||| || ||||| ||||||||||||||||| ||||| |||||||| || || ||
Sbjct: 3621 ctggaggtcaatgtccttggccttgagcctgtcaaagacctccttgagcatgatctcggc 3680

                                                                        
Query: 502  tatctctttcacctccaacttagtcagctgcctgaacacaatcatctcatccaatctgtt 561
             ||||| || ||||||| ||| || || |||||||| || |||||||| || |  | |||
Sbjct: 3681 gatctccttgacctccagcttggtgagttgcctgaagacgatcatctcgtcgagacggtt 3740

                                                                        
Query: 562  caagaactcaggcctgaaatactgcttcaactcctcggtcaccaagctcttgatcctgtt 621
             | |||||| || | ||| |||||||||| |||||||   || | ||||||||||||| |
Sbjct: 3741 gaggaactcggggcggaagtactgcttcatctcctcgacgacaaggctcttgatcctgct 3800

                                 
Query: 622  atagctggtatctttctcatc 642
             |||||| | || ||||||||
Sbjct: 3801 gtagctgctgtccttctcatc 3821

---

>dbj|AK066153.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013058A21, full
            insert sequence
          Length = 3088

 Score =  168 bits (85), Expect = 1e-38
 Identities = 307/381 (80%)
 Strand = Plus / Minus

                                                                        
Query: 262  caccttaccatctgaatccacatcaacaatagcagaatcaccttccttgacctcgccagc 321
            |||||| || || ||||||||||| ||||| ||||||||||| ||||| ||||| |||||
Sbjct: 2829 caccttcccctcggaatccacatcgacaatggcagaatcaccctccttcacctccccagc 2770

                                                                        
Query: 322  cagcatcttctccgcgaggctgtcttccaaaagcctcataatagcccgtcgcagaggcct 381
             ||||||||||||||||||||||| ||||  |||||||| || ||||  |  || |||||
Sbjct: 2769 tagcatcttctccgcgaggctgtcctccaggagcctcatgatggccctccttagcggcct 2710

                                                                        
Query: 382  ggcaccatagcttgggttgtaaccctcgtcgacaactctatcccggaacttctctgttac 441
             ||||||||||| |||||| | || ||||| || |  |  |||  ||||||||| || ||
Sbjct: 2709 cgcaccatagctcgggttgaagccttcgtcaacgatacgctccttgaacttctcggtgac 2650

                                                                        
Query: 442  ctggaggtctatttcctttgccttgagcctgtcaaacacctctttgagcataatatcagc 501
            ||||||||| |  ||||| ||||||||||||||||| ||||| |||||||| || || ||
Sbjct: 2649 ctggaggtcaacgtccttggccttgagcctgtcaaagacctccttgagcatgatctcggc 2590

                                                                        
Query: 502  tatctctttcacctccaacttagtcagctgcctgaacacaatcatctcatccaatctgtt 561
             ||||| || ||||||| ||| || || |||||||| || |||||||| || |  | |||
Sbjct: 2589 gatctccttgacctccagcttggtgagttgcctgaagacgatcatctcgtcgagacggtt 2530

                                                                        
Query: 562  caagaactcaggcctgaaatactgcttcaactcctcggtcaccaagctcttgatcctgtt 621
             | |||||| || | ||| |||||||||| |||||||   || | ||||||||||||| |
Sbjct: 2529 gaggaactcggggcggaagtactgcttcatctcctcgacgacaaggctcttgatcctgct 2470

                                 
Query: 622  atagctggtatctttctcatc 642
             |||||| | || ||||||||
Sbjct: 2469 gtagctgctgtccttctcatc 2449

---

>gb|M32604.1|TOMCD4B Tomato ATP-dependent protease (CD4B) gene, complete cds
          Length = 5846

 Score =  161 bits (81), Expect = 3e-36
 Identities = 240/293 (81%)
 Strand = Plus / Minus

                                                                        
Query: 323  agcatcttctccgcgaggctgtcttccaaaagcctcataatagcccgtcgcagaggcctg 382
            ||||| ||||| || | |||||| || ||||| ||||||||||| | || |||||| |  
Sbjct: 5411 agcattttctcagccatgctgtcctctaaaagtctcataatagctcttctcagaggtcgt 5352

                                                                        
Query: 383  gcaccatagcttgggttgtaaccctcgtcgacaactctatcccggaacttctctgttacc 442
            || |||||||| |||||||| |||||||| || || || || |  ||| ||||||| || 
Sbjct: 5351 gctccatagctagggttgtatccctcgtcaaccaccctgtctctaaacctctctgtcact 5292

                                                                        
Query: 443  tggaggtctatttcctttgccttgagcctgtcaaacacctctttgagcataatatcagct 502
            || || ||||| |||||  | || | ||| ||||| ||||| || ||||| |||||||||
Sbjct: 5291 tgaagttctatctccttaactttcaacctctcaaagacctccttaagcatgatatcagct 5232

                                                                        
Query: 503  atctctttcacctccaacttagtcagctgcctgaacacaatcatctcatccaatctgttc 562
            ||||| || ||||| |||||||| ||||| | ||| ||||||||||||||||||||||||
Sbjct: 5231 atctccttaacctctaacttagtgagctgacggaatacaatcatctcatccaatctgttc 5172

                                                                 
Query: 563  aagaactcaggcctgaaatactgcttcaactcctcggtcaccaagctcttgat 615
            || ||||| |||||||| ||||||||||| || || ||||| |||||||||||
Sbjct: 5171 aaaaactctggcctgaagtactgcttcaattcttctgtcactaagctcttgat 5119

---

>gb|M32603.1|TOMCD4A Tomato ATP-dependent protease (CD4A) gene, complete cds
          Length = 5429

 Score =  141 bits (71), Expect = 3e-30
 Identities = 278/347 (80%)
 Strand = Plus / Minus

                                                                        
Query: 269  ccatctgaatccacatcaacaatagcagaatcaccttccttgacctcgccagccagcatc 328
            ||||||||||||||||| |||||  | ||||||||||| |||| ||| || || ||||||
Sbjct: 5239 ccatctgaatccacatccacaattactgaatcaccttctttgatctcacctgcaagcatc 5180

                                                                        
Query: 329  ttctccgcgaggctgtcttccaaaagcctcataatagcccgtcgcagaggcctggcacca 388
            ||||| || |  || || || |  || ||||||||||| |  | ||  || || || |||
Sbjct: 5179 ttctcggccatactatcctctagcagtctcataatagctctcctcaatggtctagctcca 5120

                                                                        
Query: 389  tagcttgggttgtaaccctcgtcgacaactctatcccggaacttctctgttacctggagg 448
            ||||||||||| || || || || || || ||||| |  ||| ||||||| || ||||| 
Sbjct: 5119 tagcttgggttatatccttcatcaactaccctatctctaaacctctctgtcacttggagt 5060

                                                                        
Query: 449  tctatttcctttgccttgagcctgtcaaacacctctttgagcataatatcagctatctct 508
            ||||| |||||   ||| | |||  |||| ||||| || ||||| ||||| || ||||| 
Sbjct: 5059 tctatctccttattcttcaacctcacaaagacctccttaagcatgatatcggcaatctcc 5000

                                                                        
Query: 509  ttcacctccaacttagtcagctgcctgaacacaatcatctcatccaatctgttcaagaac 568
            ||||||||||||||||| ||||| | ||| ||||||||||||  ||||||||| || |||
Sbjct: 4999 ttcacctccaacttagtgagctgacggaatacaatcatctcactcaatctgtttaaaaac 4940

                                                           
Query: 569  tcaggcctgaaatactgcttcaactcctcggtcaccaagctcttgat 615
            || |||||||| ||||| ||||||||||| |||||||||||||||||
Sbjct: 4939 tctggcctgaagtactgtttcaactcctcagtcaccaagctcttgat 4893

---

>gb|AY108805.1| Zea mays PCO077883 mRNA sequence
          Length = 2049

 Score =  131 bits (66), Expect = 3e-27
 Identities = 273/342 (79%)
 Strand = Plus / Minus

                                                                        
Query: 278  tccacatcaacaatagcagaatcaccttccttgacctcgccagccagcatcttctccgcg 337
            |||||||| || || ||||| || || ||||| ||||| || || ||||||||||| || 
Sbjct: 1829 tccacatctactatggcagagtcgccctcctttacctcccctgcgagcatcttctcagca 1770

                                                                        
Query: 338  aggctgtcttccaaaagcctcataatagcccgtcgcagaggcctggcaccatagcttggg 397
            |||||||| ||||  |||||||| || || || | ||| || |  ||||||||||| |||
Sbjct: 1769 aggctgtcctccagcagcctcatgatggctcgcctcagcgggcgtgcaccatagctaggg 1710

                                                                        
Query: 398  ttgtaaccctcgtcgacaactctatcccggaacttctctgttacctggaggtctatttcc 457
            ||||| || ||||| || || |  |||  ||||||||| || || || || |  || |||
Sbjct: 1709 ttgtagccttcgtccaccacccgctccttgaacttctcggtcacttgaagattgatgtcc 1650

                                                                        
Query: 458  tttgccttgagcctgtcaaacacctctttgagcataatatcagctatctctttcacctcc 517
            || ||||| ||||||||||| ||||| | |||||| || || |||||||| || ||||| 
Sbjct: 1649 ttggccttcagcctgtcaaagacctcctggagcatgatgtccgctatctccttgacctcg 1590

                                                                        
Query: 518  aacttagtcagctgcctgaacacaatcatctcatccaatctgttcaagaactcaggcctg 577
            | ||| || |||||||||||||| ||||||||||| |  | ||| | ||||||||| | |
Sbjct: 1589 agcttggtaagctgcctgaacacgatcatctcatcgagacggttgaggaactcaggtcgg 1530

                                                      
Query: 578  aaatactgcttcaactcctcggtcaccaagctcttgatcctg 619
            ||||||||||||| ||||||| | |||| |||||||||||||
Sbjct: 1529 aaatactgcttcatctcctcgatgaccaggctcttgatcctg 1488

---

>dbj|AP006392.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT39E03, TM0266,
              complete sequence
          Length = 113459

 Score =  131 bits (66), Expect = 3e-27
 Identities = 282/354 (79%)
 Strand = Plus / Plus

                                                                          
Query: 262    caccttaccatctgaatccacatcaacaatagcagaatcaccttccttgacctcgccagc 321
              |||||||||||| |||||  ||||||  ||| |||| ||||| || || | ||| |||||
Sbjct: 112661 caccttaccatcagaatcagcatcaattataacagagtcaccctctttaatctctccagc 112720

                                                                          
Query: 322    cagcatcttctccgcgaggctgtcttccaaaagcctcataatagcccgtcgcagaggcct 381
               ||||||||||| || | |||||| ||||| |||| ||| || || ||||  ||||||||
Sbjct: 112721 aagcatcttctctgccatgctgtcctccaagagccgcattatggctcgtcttagaggcct 112780

                                                                          
Query: 382    ggcaccatagcttgggttgtaaccctcgtcgacaactctatcccggaacttctctgttac 441
               || ||||| || || |  ||||| || || || ||||||||||  ||  ||||||| ||
Sbjct: 112781 tgccccataactaggatcataaccttcttcaaccactctatccctaaatctctctgtcac 112840

                                                                          
Query: 442    ctggaggtctatttcctttgccttgagcctgtcaaacacctctttgagcataatatcagc 501
                  || || ||||| || |  || || |||||||| ||||| || ||||| ||||||||
Sbjct: 112841 tgaaagatcaatttctttggttttcagtctgtcaaatacctccttcagcattatatcagc 112900

                                                                          
Query: 502    tatctctttcacctccaacttagtcagctgcctgaacacaatcatctcatccaatctgtt 561
              |||||| |||||||||| ||| || || |||||||| |||||||| || ||||| || ||
Sbjct: 112901 tatctccttcacctccagctttgtgagttgcctgaaaacaatcatttcgtccaacctatt 112960

                                                                    
Query: 562    caagaactcaggcctgaaatactgcttcaactcctcggtcaccaagctcttgat 615
              ||| ||||||||||| || |||||||| | |||||| |||||||||||||||||
Sbjct: 112961 caaaaactcaggcctaaagtactgctttagctcctcagtcaccaagctcttgat 113014

---

>dbj|AP006098.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT10G08, TM0175,
             complete sequence
          Length = 108582

 Score =  131 bits (66), Expect = 3e-27
 Identities = 282/354 (79%)
 Strand = Plus / Plus

                                                                         
Query: 262   caccttaccatctgaatccacatcaacaatagcagaatcaccttccttgacctcgccagc 321
             |||||||||||| |||||  ||||||  ||| |||| ||||| || || | ||| |||||
Sbjct: 63652 caccttaccatcagaatcagcatcaattataacagagtcaccctctttaatctctccagc 63711

                                                                         
Query: 322   cagcatcttctccgcgaggctgtcttccaaaagcctcataatagcccgtcgcagaggcct 381
              ||||||||||| || | |||||| ||||| |||| ||| || || ||||  ||||||||
Sbjct: 63712 aagcatcttctctgccatgctgtcctccaagagccgcattatggctcgtcttagaggcct 63771

                                                                         
Query: 382   ggcaccatagcttgggttgtaaccctcgtcgacaactctatcccggaacttctctgttac 441
              || ||||| || || |  ||||| || || || ||||||||||  ||  ||||||| ||
Sbjct: 63772 tgccccataactaggatcataaccttcttcaaccactctatccctaaatctctctgtcac 63831

                                                                         
Query: 442   ctggaggtctatttcctttgccttgagcctgtcaaacacctctttgagcataatatcagc 501
                 || || ||||| || |  || || |||||||| ||||| || ||||| ||||||||
Sbjct: 63832 tgaaagatcaatttctttggttttcagtctgtcaaatacctccttcagcattatatcagc 63891

                                                                         
Query: 502   tatctctttcacctccaacttagtcagctgcctgaacacaatcatctcatccaatctgtt 561
             |||||| |||||||||| ||| || || |||||||| |||||||| || ||||| || ||
Sbjct: 63892 tatctccttcacctccagctttgtgagttgcctgaaaacaatcatttcgtccaacctatt 63951

                                                                   
Query: 562   caagaactcaggcctgaaatactgcttcaactcctcggtcaccaagctcttgat 615
             ||| ||||||||||| || |||||||| | |||||| |||||||||||||||||
Sbjct: 63952 caaaaactcaggcctaaagtactgctttagctcctcagtcaccaagctcttgat 64005

---

>gb|L09547.1|PEAPCLP Pisum sativum (clone pCLp) nuclear encoded precursor to chloroplast
            protein mRNA, complete cds
          Length = 3239

 Score =  119 bits (60), Expect = 1e-23
 Identities = 141/168 (83%)
 Strand = Plus / Minus

                                                                        
Query: 475  aaacacctctttgagcataatatcagctatctctttcacctccaacttagtcagctgcct 534
            ||||||||| |||||||| || || |||||||| ||||| ||||| || || || || ||
Sbjct: 2547 aaacacctccttgagcattatgtctgctatctccttcacttccaattttgtgagttgtct 2488

                                                                        
Query: 535  gaacacaatcatctcatccaatctgttcaagaactcaggcctgaaatactgcttcaactc 594
            ||| |||||||| |||||||| || ||||| ||||| |||||||| || || || | |||
Sbjct: 2487 gaaaacaatcatttcatccaacctattcaaaaactctggcctgaagtattgttttagctc 2428

                                                            
Query: 595  ctcggtcaccaagctcttgatcctgttatagctggtatctttctcatc 642
            ||| ||||||||||||||||| || ||||| ||| |||||||||||||
Sbjct: 2427 ctcagtcaccaagctcttgattctattataactgctatctttctcatc 2380



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 84/105 (80%)
 Strand = Plus / Minus

                                                                        
Query: 250  gttgagaaccaccaccttaccatctgaatccacatcaacaatagcagaatcaccttcctt 309
            ||||||||| | ||| |||||||| ||||| ||||| || ||  |||||||||| || ||
Sbjct: 2772 gttgagaacaatcactttaccatcagaatcaacatccactatgacagaatcaccctcttt 2713

                                                         
Query: 310  gacctcgccagccagcatcttctccgcgaggctgtcttccaaaag 354
            || ||| |  || ||||||||||| || | ||| || ||||||||
Sbjct: 2712 gatctctctggcgagcatcttctcagccatgctatcctccaaaag 2668

---

>gb|AC126794.15| Medicago truncatula clone mth2-24j7, complete sequence
          Length = 129513

 Score =  111 bits (56), Expect = 3e-21
 Identities = 140/168 (83%)
 Strand = Plus / Plus

                                                                         
Query: 476   aacacctctttgagcataatatcagctatctctttcacctccaacttagtcagctgcctg 535
             |||||||| || ||||| ||||| |||||||| || |||||||  ||||| || ||||||
Sbjct: 36204 aacacctccttcagcattatatctgctatctccttaacctccagtttagtgagttgcctg 36263

                                                                         
Query: 536   aacacaatcatctcatccaatctgttcaagaactcaggcctgaaatactgcttcaactcc 595
             || |||||||| ||||| |  || ||||||||||| ||||| || || || |||| ||| 
Sbjct: 36264 aaaacaatcatttcatcaagcctattcaagaactctggcctaaagtattgtttcagctct 36323

                                                             
Query: 596   tcggtcaccaagctcttgatcctgttatagctggtatctttctcatca 643
             |||||||||||||||||||| |||||||| ||| | || |||||||||
Sbjct: 36324 tcggtcaccaagctcttgattctgttataactgctgtccttctcatca 36371



 Score = 46.1 bits (23), Expect = 0.14
 Identities = 83/103 (80%)
 Strand = Plus / Plus

                                                                         
Query: 323   agcatcttctccgcgaggctgtcttccaaaagcctcataatagcccgtcgcagaggcctg 382
             |||||||| || || | |||||| |||||||| | ||| || || ||||  |||||||||
Sbjct: 36051 agcatcttttcagccatgctgtcctccaaaagtcgcattatggctcgtcttagaggcctg 36110

                                                        
Query: 383   gcaccatagcttgggttgtaaccctcgtcgacaactctatccc 425
             || ||||| || || || ||||| |||||||| ||||| ||||
Sbjct: 36111 gccccataactaggattataaccttcgtcgaccactctctccc 36153

---

>gb|AF043539.1|AF043539 Spinacia oleracea ClpC protease (clpC) mRNA, chloroplast gene
            encoding chloroplast protein, complete cds
          Length = 2992

 Score =  105 bits (53), Expect = 2e-19
 Identities = 215/269 (79%)
 Strand = Plus / Minus

                                                                        
Query: 347  tccaaaagcctcataatagcccgtcgcagaggcctggcaccatagcttgggttgtaaccc 406
            |||| ||| |||||||||||||  | || ||| || |||||||| || |||||||| || 
Sbjct: 2770 tccagaagtctcataatagccctcctcaaaggtctagcaccataactagggttgtagcct 2711

                                                                        
Query: 407  tcgtcgacaactctatcccggaacttctctgttacctggaggtctatttcctttgccttg 466
            || || || || ||||| | |||  |||||||||| || || || ||||||||   ||| 
Sbjct: 2710 tcatccaccaccctatctctgaatctctctgttacttgaagctcaatttccttgttcttc 2651

                                                                        
Query: 467  agcctgtcaaacacctctttgagcataatatcagctatctctttcacctccaacttagtc 526
            | |||  |||| ||||| || | ||||||||| || || || || ||||||| ||| || 
Sbjct: 2650 aacctcccaaatacctccttcaacataatatcggcaatttccttgacctccagctttgta 2591

                                                                        
Query: 527  agctgcctgaacacaatcatctcatccaatctgttcaagaactcaggcctgaaatactgc 586
            || ||||| ||||||||||||||||| ||||||||||||||||||||||| || ||||||
Sbjct: 2590 agttgcctaaacacaatcatctcatctaatctgttcaagaactcaggcctaaagtactgc 2531

                                         
Query: 587  ttcaactcctcggtcaccaagctcttgat 615
            || | ||| || ||||| | |||||||||
Sbjct: 2530 ttaagctcttcagtcacaaggctcttgat 2502

---

>ref|NM_114746.2| Arabidopsis thaliana ATCLPC; ATP binding / ATPase/ DNA binding /
            nuclease/ nucleoside-triphosphatase/ nucleotide binding /
            protein binding AT3G48870 (ATCLPC) mRNA, complete cds
          Length = 3130

 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 131/158 (82%)
 Strand = Plus / Minus

                                                                        
Query: 482  tctttgagcataatatcagctatctctttcacctccaacttagtcagctgcctgaacaca 541
            ||||| ||||| |||||||| ||||| || || |||| ||| || | ||| ||||| |||
Sbjct: 2664 tctttaagcattatatcagcaatctccttgacttccagctttgttaactgtctgaaaaca 2605

                                                                        
Query: 542  atcatctcatccaatctgttcaagaactcaggcctgaaatactgcttcaactcctcggtc 601
            ||||||||||| || |||||||||||||| || ||||||||||| || |  ||||| |||
Sbjct: 2604 atcatctcatctaacctgttcaagaactctggtctgaaatactgttttagttcctcagtc 2545

                                                  
Query: 602  accaagctcttgatcctgttatagctggtatctttctc 639
            || ||||||||||| ||||| || ||| | ||||||||
Sbjct: 2544 actaagctcttgattctgttgtaactgctgtctttctc 2507



 Score = 40.1 bits (20), Expect = 8.8
 Identities = 56/68 (82%)
 Strand = Plus / Minus

                                                                        
Query: 323  agcatcttctccgcgaggctgtcttccaaaagcctcataatagcccgtcgcagaggcctg 382
            |||||||||||||| |  || || |||||||||||||| || || ||||  || ||||| 
Sbjct: 2823 agcatcttctccgccatactatcctccaaaagcctcattattgcacgtctaagtggcctc 2764

                    
Query: 383  gcaccata 390
            ||||||||
Sbjct: 2763 gcaccata 2756

---

>emb|AL132963.1|ATT21J18 Arabidopsis thaliana DNA chromosome 3, BAC clone T21J18
          Length = 82912

 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 131/158 (82%)
 Strand = Plus / Plus

                                                                         
Query: 482   tctttgagcataatatcagctatctctttcacctccaacttagtcagctgcctgaacaca 541
             ||||| ||||| |||||||| ||||| || || |||| ||| || | ||| ||||| |||
Sbjct: 71103 tctttaagcattatatcagcaatctccttgacttccagctttgttaactgtctgaaaaca 71162

                                                                         
Query: 542   atcatctcatccaatctgttcaagaactcaggcctgaaatactgcttcaactcctcggtc 601
             ||||||||||| || |||||||||||||| || ||||||||||| || |  ||||| |||
Sbjct: 71163 atcatctcatctaacctgttcaagaactctggtctgaaatactgttttagttcctcagtc 71222

                                                   
Query: 602   accaagctcttgatcctgttatagctggtatctttctc 639
             || ||||||||||| ||||| || ||| | ||||||||
Sbjct: 71223 actaagctcttgattctgttgtaactgctgtctttctc 71260



 Score = 40.1 bits (20), Expect = 8.8
 Identities = 56/68 (82%)
 Strand = Plus / Plus

                                                                         
Query: 323   agcatcttctccgcgaggctgtcttccaaaagcctcataatagcccgtcgcagaggcctg 382
             |||||||||||||| |  || || |||||||||||||| || || ||||  || ||||| 
Sbjct: 70944 agcatcttctccgccatactatcctccaaaagcctcattattgcacgtctaagtggcctc 71003

                     
Query: 383   gcaccata 390
             ||||||||
Sbjct: 71004 gcaccata 71011

---

>gb|AY056787.1| Arabidopsis thaliana AT3g48870/T21J18_140 mRNA, complete cds
          Length = 3105

 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 131/158 (82%)
 Strand = Plus / Minus

                                                                        
Query: 482  tctttgagcataatatcagctatctctttcacctccaacttagtcagctgcctgaacaca 541
            ||||| ||||| |||||||| ||||| || || |||| ||| || | ||| ||||| |||
Sbjct: 2665 tctttaagcattatatcagcaatctccttgacttccagctttgttaactgtctgaaaaca 2606

                                                                        
Query: 542  atcatctcatccaatctgttcaagaactcaggcctgaaatactgcttcaactcctcggtc 601
            ||||||||||| || |||||||||||||| || ||||||||||| || |  ||||| |||
Sbjct: 2605 atcatctcatctaacctgttcaagaactctggtctgaaatactgttttagttcctcagtc 2546

                                                  
Query: 602  accaagctcttgatcctgttatagctggtatctttctc 639
            || ||||||||||| ||||| || ||| | ||||||||
Sbjct: 2545 actaagctcttgattctgttgtaactgctgtctttctc 2508



 Score = 40.1 bits (20), Expect = 8.8
 Identities = 56/68 (82%)
 Strand = Plus / Minus

                                                                        
Query: 323  agcatcttctccgcgaggctgtcttccaaaagcctcataatagcccgtcgcagaggcctg 382
            |||||||||||||| |  || || |||||||||||||| || || ||||  || ||||| 
Sbjct: 2824 agcatcttctccgccatactatcctccaaaagcctcattattgcacgtctaagtggcctc 2765

                    
Query: 383  gcaccata 390
            ||||||||
Sbjct: 2764 gcaccata 2757

---

>dbj|AB022324.1| Arabidopsis thaliana mRNA for AtClpC, complete cds
          Length = 3090

 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 131/158 (82%)
 Strand = Plus / Minus

                                                                        
Query: 482  tctttgagcataatatcagctatctctttcacctccaacttagtcagctgcctgaacaca 541
            ||||| ||||| |||||||| ||||| || || |||| ||| || | ||| ||||| |||
Sbjct: 2649 tctttaagcattatatcagcaatctccttgacttccagctttgttaactgtctgaaaaca 2590

                                                                        
Query: 542  atcatctcatccaatctgttcaagaactcaggcctgaaatactgcttcaactcctcggtc 601
            ||||||||||| || |||||||||||||| || ||||||||||| || |  ||||| |||
Sbjct: 2589 atcatctcatctaacctgttcaagaactctggtctgaaatactgttttagttcctcagtc 2530

                                                  
Query: 602  accaagctcttgatcctgttatagctggtatctttctc 639
            || ||||||||||| ||||| || ||| | ||||||||
Sbjct: 2529 actaagctcttgattctgttgtaactgctgtctttctc 2492



 Score = 40.1 bits (20), Expect = 8.8
 Identities = 56/68 (82%)
 Strand = Plus / Minus

                                                                        
Query: 323  agcatcttctccgcgaggctgtcttccaaaagcctcataatagcccgtcgcagaggcctg 382
            |||||||||||||| |  || || |||||||||||||| || || ||||  || ||||| 
Sbjct: 2808 agcatcttctccgccatactatcctccaaaagcctcattattgcacgtctaagtggcctc 2749

                    
Query: 383  gcaccata 390
            ||||||||
Sbjct: 2748 gcaccata 2741

---

>gb|AF053562.1|AF053562 Mesembryanthemum crystallinum ATP-dependent protease mRNA, partial
           cds
          Length = 531

 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 127/155 (81%)
 Strand = Plus / Minus

                                                                       
Query: 269 ccatctgaatccacatcaacaatagcagaatcaccttccttgacctcgccagccagcatc 328
           ||||||||||| ||||| |||||| | ||||| || || ||||  || |  || ||||||
Sbjct: 158 ccatctgaatcaacatccacaataaccgaatcgccctctttgatttctcgggcgagcatc 99

                                                                       
Query: 329 ttctccgcgaggctgtcttccaaaagcctcataatagcccgtcgcagaggcctggcacca 388
           ||||| || | |||||| |||| ||| |||||||||||||  | ||||||||  ||||||
Sbjct: 98  ttctcggccatgctgtcctccagaagtctcataatagccctcctcagaggccgagcacca 39

                                              
Query: 389 tagcttgggttgtaaccctcgtcgacaactctatc 423
           ||||| |||||||||||||| || || ||||||||
Sbjct: 38  tagctggggttgtaaccctcatccaccactctatc 4

---

>gb|AF022909.1| Arabidopsis thaliana ClpC mRNA, nuclear gene encoding chloroplast
            protein, complete cds
          Length = 2912

 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 116/143 (81%)
 Strand = Plus / Minus

                                                                        
Query: 497  tcagctatctctttcacctccaacttagtcagctgcctgaacacaatcatctcatccaat 556
            ||||| || |||||||| |||| ||| || ||||| ||||||||||||||||| || |  
Sbjct: 2583 tcagcaatttctttcacttccagctttgttagctgtctgaacacaatcatctcgtctagc 2524

                                                                        
Query: 557  ctgttcaagaactcaggcctgaaatactgcttcaactcctcggtcaccaagctcttgatc 616
            ||||| | |||||| || |||||||| || |||| |||||| || || | ||||||||| 
Sbjct: 2523 ctgtttaggaactcgggtctgaaatattgtttcagctcctctgttacaaggctcttgatt 2464

                                   
Query: 617  ctgttatagctggtatctttctc 639
            ||||| || ||| | ||||||||
Sbjct: 2463 ctgttgtaactgctgtctttctc 2441

---

>ref|NM_124471.2| Arabidopsis thaliana CLPC; ATP binding / ATPase AT5G50920 (CLPC)
            mRNA, complete cds
          Length = 3183

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 115/143 (80%)
 Strand = Plus / Minus

                                                                        
Query: 497  tcagctatctctttcacctccaacttagtcagctgcctgaacacaatcatctcatccaat 556
            ||||| || |||||||| |||| ||| || ||||| ||||||||||||||||| || |  
Sbjct: 2635 tcagcaatttctttcacttccagctttgttagctgtctgaacacaatcatctcgtctagc 2576

                                                                        
Query: 557  ctgttcaagaactcaggcctgaaatactgcttcaactcctcggtcaccaagctcttgatc 616
            ||||| | |||||| || ||||| || || |||| |||||| || || | ||||||||| 
Sbjct: 2575 ctgtttaggaactcgggtctgaagtattgtttcagctcctctgttacaaggctcttgatt 2516

                                   
Query: 617  ctgttatagctggtatctttctc 639
            ||||| || ||| | ||||||||
Sbjct: 2515 ctgttgtaactgctgtctttctc 2493

---

>gb|AY102125.1| Arabidopsis thaliana AT5g50920/K3K7_7 mRNA, complete cds
          Length = 3125

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 115/143 (80%)
 Strand = Plus / Minus

                                                                        
Query: 497  tcagctatctctttcacctccaacttagtcagctgcctgaacacaatcatctcatccaat 556
            ||||| || |||||||| |||| ||| || ||||| ||||||||||||||||| || |  
Sbjct: 2610 tcagcaatttctttcacttccagctttgttagctgtctgaacacaatcatctcgtctagc 2551

                                                                        
Query: 557  ctgttcaagaactcaggcctgaaatactgcttcaactcctcggtcaccaagctcttgatc 616
            ||||| | |||||| || ||||| || || |||| |||||| || || | ||||||||| 
Sbjct: 2550 ctgtttaggaactcgggtctgaagtattgtttcagctcctctgttacaaggctcttgatt 2491

                                   
Query: 617  ctgttatagctggtatctttctc 639
            ||||| || ||| | ||||||||
Sbjct: 2490 ctgttgtaactgctgtctttctc 2468

---

>dbj|AK220924.1| Arabidopsis thaliana mRNA for ATP-dependent Clp protease,
           ATP-binding subunit, complete cds, clone: RAFL22-49-P06
          Length = 774

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 115/143 (80%)
 Strand = Plus / Minus

                                                                       
Query: 497 tcagctatctctttcacctccaacttagtcagctgcctgaacacaatcatctcatccaat 556
           ||||| || |||||||| |||| ||| || ||||| ||||||||||||||||| || |  
Sbjct: 267 tcagcaatttctttcacttccagctttgttagctgtctgaacacaatcatctcgtctagc 208

                                                                       
Query: 557 ctgttcaagaactcaggcctgaaatactgcttcaactcctcggtcaccaagctcttgatc 616
           ||||| | |||||| || ||||| || || |||| |||||| || || | ||||||||| 
Sbjct: 207 ctgtttaggaactcgggtctgaagtattgtttcagctcctctgttacaaggctcttgatt 148

                                  
Query: 617 ctgttatagctggtatctttctc 639
           ||||| || ||| | ||||||||
Sbjct: 147 ctgttgtaactgctgtctttctc 125

---

>emb|BX830850.1|CNS0A0O2 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS30ZG04 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1161

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 115/143 (80%)
 Strand = Plus / Minus

                                                                       
Query: 497 tcagctatctctttcacctccaacttagtcagctgcctgaacacaatcatctcatccaat 556
           ||||| || |||||||| |||| ||| || ||||| ||||||||||||||||| || |  
Sbjct: 681 tcagcaatttctttcacttccagctttgttagctgtctgaacacaatcatctcgtctagc 622

                                                                       
Query: 557 ctgttcaagaactcaggcctgaaatactgcttcaactcctcggtcaccaagctcttgatc 616
           ||||| | |||||| || ||||| || || |||| |||||| || || | ||||||||| 
Sbjct: 621 ctgtttaggaactcgggtctgaagtattgtttcagctcctctgttacaaggctcttgatt 562

                                  
Query: 617 ctgttatagctggtatctttctc 639
           ||||| || ||| | ||||||||
Sbjct: 561 ctgttgtaactgctgtctttctc 539

---

>dbj|AB017063.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K3K7
          Length = 68726

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 115/143 (80%)
 Strand = Plus / Plus

                                                                         
Query: 497   tcagctatctctttcacctccaacttagtcagctgcctgaacacaatcatctcatccaat 556
             ||||| || |||||||| |||| ||| || ||||| ||||||||||||||||| || |  
Sbjct: 18509 tcagcaatttctttcacttccagctttgttagctgtctgaacacaatcatctcgtctagc 18568

                                                                         
Query: 557   ctgttcaagaactcaggcctgaaatactgcttcaactcctcggtcaccaagctcttgatc 616
             ||||| | |||||| || ||||| || || |||| |||||| || || | ||||||||| 
Sbjct: 18569 ctgtttaggaactcgggtctgaagtattgtttcagctcctctgttacaaggctcttgatt 18628

                                    
Query: 617   ctgttatagctggtatctttctc 639
             ||||| || ||| | ||||||||
Sbjct: 18629 ctgttgtaactgctgtctttctc 18651

---

>gb|AC135498.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0010M24, complete sequence
          Length = 164853

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 47/55 (85%)
 Strand = Plus / Minus

                                                                    
Query: 296   gaatcaccttccttgacctcgccagccagcatcttctccgcgaggctgtcttcca 350
             ||||| |||||  ||||||| || || |||||||||||||||||| |||| ||||
Sbjct: 85937 gaatccccttctctgacctctccggcgagcatcttctccgcgagggtgtcctcca 85883

---

>emb|Z73073.1|SCYGR288W S.cerevisiae chromosome VII reading frame ORF YGR288w
          Length = 5198

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 537  acacaatcatctcatccaatctg 559
            |||||||||||||||||||||||
Sbjct: 3280 acacaatcatctcatccaatctg 3258

---

>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 47/55 (85%)
 Strand = Plus / Plus

                                                                      
Query: 296     gaatcaccttccttgacctcgccagccagcatcttctccgcgaggctgtcttcca 350
               ||||| |||||  ||||||| || || |||||||||||||||||| |||| ||||
Sbjct: 9198083 gaatccccttctctgacctctccggcgagcatcttctccgcgagggtgtcctcca 9198137

---

>emb|Z73074.1|SCYGR289C S.cerevisiae chromosome VII reading frame ORF YGR289c
          Length = 4568

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 537 acacaatcatctcatccaatctg 559
           |||||||||||||||||||||||
Sbjct: 330 acacaatcatctcatccaatctg 308

---

>emb|X94332.1|SCCHVIIRA S.cerevisiae DNA for fragment from chromosome VII
          Length = 35400

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 537  acacaatcatctcatccaatctg 559
            |||||||||||||||||||||||
Sbjct: 8538 acacaatcatctcatccaatctg 8560

---

>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 47/55 (85%)
 Strand = Plus / Plus

                                                                      
Query: 296     gaatcaccttccttgacctcgccagccagcatcttctccgcgaggctgtcttcca 350
               ||||| |||||  ||||||| || || |||||||||||||||||| |||| ||||
Sbjct: 9269780 gaatccccttctctgacctctccggcgagcatcttctccgcgagggtgtcctcca 9269834

---

>ref|NM_128071.2| Arabidopsis thaliana ATP binding / ATPase/ nucleoside-triphosphatase/
            nucleotide binding / protein binding AT2G25140 mRNA,
            complete cds
          Length = 3223

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 556  tctgttcaagaactcaggcctgaaat 581
            |||||||| |||||||||||||||||
Sbjct: 2695 tctgttcatgaactcaggcctgaaat 2670

---

>ref|XM_976295.1| PREDICTED: Mus musculus RIKEN cDNA 4932431H17 gene (4932431H17Rik),
           mRNA
          Length = 1530

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 455 tcctttgccttgagcctgtcaa 476
           ||||||||||||||||||||||
Sbjct: 680 tcctttgccttgagcctgtcaa 659

---

>ref|XM_619904.3| PREDICTED: Mus musculus RIKEN cDNA 4932431H17 gene (4932431H17Rik),
            mRNA
          Length = 2195

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 455  tcctttgccttgagcctgtcaa 476
            ||||||||||||||||||||||
Sbjct: 1215 tcctttgccttgagcctgtcaa 1194

---

>ref|XM_915991.2| PREDICTED: Mus musculus RIKEN cDNA 4932431H17 gene (4932431H17Rik),
            mRNA
          Length = 1591

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 455  tcctttgccttgagcctgtcaa 476
            ||||||||||||||||||||||
Sbjct: 1215 tcctttgccttgagcctgtcaa 1194

---

>emb|CR352307.11| Zebrafish DNA sequence from clone DKEY-81P21 in linkage group 7,
             complete sequence
          Length = 116787

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 570   caggcctgaaatactgcttcaa 591
             ||||||||||||||||||||||
Sbjct: 79903 caggcctgaaatactgcttcaa 79924

---

>dbj|AK133299.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched
            library, clone:4932431H17 product:hypothetical Glutamic
            acid-rich region profile containing protein, full insert
            sequence
          Length = 2789

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 455  tcctttgccttgagcctgtcaa 476
            ||||||||||||||||||||||
Sbjct: 1217 tcctttgccttgagcctgtcaa 1196

---

>gb|AY070722.1| Arabidopsis thaliana At2g25140/F13D4.100 mRNA, complete cds
          Length = 3223

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 556  tctgttcaagaactcaggcctgaaat 581
            |||||||| |||||||||||||||||
Sbjct: 2695 tctgttcatgaactcaggcctgaaat 2670

---

>gb|AC119873.38| Mus musculus chromosome 3, clone RP24-275F18, complete sequence
          Length = 183408

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 455    tcctttgccttgagcctgtcaa 476
              ||||||||||||||||||||||
Sbjct: 102491 tcctttgccttgagcctgtcaa 102512

---

>gb|BT002223.1| Arabidopsis thaliana At2g25140/F13D4.100 mRNA, complete cds
          Length = 2895

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 556  tctgttcaagaactcaggcctgaaat 581
            |||||||| |||||||||||||||||
Sbjct: 2541 tctgttcatgaactcaggcctgaaat 2516

---

>emb|AL162596.30| Human DNA sequence from clone RP1-13P20 on chromosome 1q21.1-21.3
              Contains the SPRL2A gene for small proline rich-like
              (epidermal differentiation complex) 2A, the LEP1 gene for
              late envelope protein 1, a novel gene, the MCSP gene for
              mitochondrial capsule selenoprotein and the IVL gene for
              involucrin, complete sequence
          Length = 116067

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 449    tctatttcctttgccttgagcctgt 473
              ||||||||||||||||| |||||||
Sbjct: 100119 tctatttcctttgccttcagcctgt 100143

---

>emb|Z97336.1|ATFCA1 Arabidopsis thaliana DNA chromosome 4, ESSA I FCA contig fragment No. 1
          Length = 206606

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                   
Query: 545    atctcatccaatctgttcaagaactcaggcctgaaat 581
              ||||||||||||||||| || | ||| ||||||||||
Sbjct: 170869 atctcatccaatctgtttaacagctctggcctgaaat 170833

---

>emb|AL161539.2|ATCHRIV39 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 39
          Length = 197976

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                   
Query: 545    atctcatccaatctgttcaagaactcaggcctgaaat 581
              ||||||||||||||||| || | ||| ||||||||||
Sbjct: 116365 atctcatccaatctgtttaacagctctggcctgaaat 116329

---

>gb|DQ397597.1| Cenarchaeum symbiosum clone C05G09, complete sequence
          Length = 38349

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 460  tgccttgagcctgtcaaacacctct 484
            |||||||||||||||||||| ||||
Sbjct: 5128 tgccttgagcctgtcaaacaactct 5152

---

>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                    
Query: 305     tccttgacctcgccagccagcatcttctccgcgaggc 341
               |||||||||||||| ||||| |||| || ||||||||
Sbjct: 5516173 tccttgacctcgcccgccaggatctccttcgcgaggc 5516137

---

>gb|U59738.1|ATU59738 Arabidopsis thaliana ATP sulfurylase (APS3) gene, complete cds
          Length = 3680

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                 
Query: 545  atctcatccaatctgttcaagaactcaggcctgaaat 581
            ||||||||||||||||| || | ||| ||||||||||
Sbjct: 3611 atctcatccaatctgtttaacagctctggcctgaaat 3647

---

>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome
          Length = 7036071

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 368    cgtcgcagaggcctggcacca 388
              |||||||||||||||||||||
Sbjct: 110923 cgtcgcagaggcctggcacca 110903

---

>gb|M17917.1|HUMIR3EB1 Human DNA with homology to EBV IR3 repeat, segment 1, clone Hu2
          Length = 1400

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 449 tctatttcctttgccttgagcctgt 473
           ||||||||||||||||| |||||||
Sbjct: 335 tctatttcctttgccttcagcctgt 359

---

>gb|AC123698.15| Mus musculus chromosome 15, clone RP23-331P14, complete sequence
          Length = 201739

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 296    gaatcaccttccttgacctc 315
              ||||||||||||||||||||
Sbjct: 116415 gaatcaccttccttgacctc 116434

---

>ref|XM_863711.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN9422.2), mRNA
          Length = 1185

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 552 ccaatctgttcaagaactca 571
           ||||||||||||||||||||
Sbjct: 232 ccaatctgttcaagaactca 213

---

>gb|AC142227.3| Mus musculus BAC clone RP24-115G21 from chromosome 12, complete sequence
          Length = 154904

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 295    agaatcaccttccttgacct 314
              ||||||||||||||||||||
Sbjct: 123938 agaatcaccttccttgacct 123957

---

>emb|AJ965256.1| Dehalococcoides sp. CBDB1 complete genome
          Length = 1395502

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 371   cgcagaggcctggcaccata 390
             ||||||||||||||||||||
Sbjct: 53400 cgcagaggcctggcaccata 53381

---

>gb|AC127568.4| Mus musculus BAC clone RP24-215P13 from chromosome 10, complete sequence
          Length = 206192

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 183    aaataaaaaggacccccaac 202
              ||||||||||||||||||||
Sbjct: 195503 aaataaaaaggacccccaac 195484

---

>gb|AC125535.4| Mus musculus BAC clone RP24-69I6 from chromosome 12, complete
           sequence
          Length = 178473

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 295 agaatcaccttccttgacct 314
           ||||||||||||||||||||
Sbjct: 518 agaatcaccttccttgacct 537

---

>gb|AC122829.4| Mus musculus BAC clone RP23-224F12 from 10, complete sequence
          Length = 155915

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 183    aaataaaaaggacccccaac 202
              ||||||||||||||||||||
Sbjct: 128178 aaataaaaaggacccccaac 128197

---

>gb|AC107801.14| Mus musculus, clone RP23-29M6, complete sequence
          Length = 283075

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 19     tctatgtttgttttgtttac 38
              ||||||||||||||||||||
Sbjct: 276350 tctatgtttgttttgtttac 276369

---

>emb|AL353704.10| Human DNA sequence from clone RP11-551M15 on chromosome 13 Contains three
              novel genes, the 5' end of the ARHGEF7 gene for Rho guanine
              nucleotide exchange factor (GEF) 7 (KIAA0142) and three CpG
              islands, complete sequence
          Length = 117417

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 302    ccttccttgacctcgccagccagc 325
              ||||||||||||||| ||||||||
Sbjct: 103466 ccttccttgacctcgtcagccagc 103443

---

>ref|XM_784682.1| PREDICTED: Strongylocentrotus purpuratus similar to adenosine
            monophosphate deaminase 2 (isoform L) (LOC584836),
            partial mRNA
          Length = 2124

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 470  ctgtcaaacacctctttgag 489
            ||||||||||||||||||||
Sbjct: 1304 ctgtcaaacacctctttgag 1285

---

>emb|AL138751.18| Human DNA sequence from clone RP11-346E17 on chromosome 9 Contains the 5'
              end of a novel gene (CGI-67), a novel gene, a novel gene
              (LOC138240) and a CpG island, complete sequence
          Length = 195844

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 241    actcccactgttgagaacca 260
              ||||||||||||||||||||
Sbjct: 169359 actcccactgttgagaacca 169378

---

>ref|XM_787522.1| PREDICTED: Strongylocentrotus purpuratus similar to adenosine
           monophosphate deaminase 2 (isoform L) (LOC587814), mRNA
          Length = 1764

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 470 ctgtcaaacacctctttgag 489
           ||||||||||||||||||||
Sbjct: 530 ctgtcaaacacctctttgag 511

---

>emb|Y07826.2|TTDNAKOPN T.thermophilus DnaK operon
          Length = 6480

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 305  tccttgacctcgccagccagcatcttct 332
            |||||||||||||| ||||| |||||||
Sbjct: 6374 tccttgacctcgccggccaggatcttct 6347

---

>emb|AL646051.19| Mouse DNA sequence from clone RP23-222M22 on chromosome 11 Contains the
              5' end of the Hs3st3a gene for heparan sulfate
              (glucosamine) 3-O-sulfotransferase 3A and a CpG island,
              complete sequence
          Length = 144847

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 280    cacatcaacaatagcagaatcaccttcc 307
              ||||| ||||| ||||||||||||||||
Sbjct: 112062 cacataaacaacagcagaatcaccttcc 112035

---

>gb|AC165148.2| Mus musculus BAC clone RP24-278K24 from chromosome 14, complete sequence
          Length = 197531

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 24     gtttgttttgtttacataac 43
              ||||||||||||||||||||
Sbjct: 140510 gtttgttttgtttacataac 140529

---

>emb|CR384108.7| Zebrafish DNA sequence from clone DKEYP-26H11 in linkage group 22,
              complete sequence
          Length = 167824

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 17     catctatgtttgttttgttt 36
              ||||||||||||||||||||
Sbjct: 114617 catctatgtttgttttgttt 114598

---

>gb|AC012516.15| Homo sapiens 3 BAC RP11-99A5 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 79175

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 302   ccttccttgacctcgccagccagc 325
             ||||||||||||||| ||||||||
Sbjct: 65183 ccttccttgacctcgtcagccagc 65160

---

>emb|CR388079.8| Zebrafish DNA sequence from clone DKEY-29F21 in linkage group 22,
             complete sequence
          Length = 122514

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 17    catctatgtttgttttgttt 36
             ||||||||||||||||||||
Sbjct: 73416 catctatgtttgttttgttt 73397

---

>gb|AC073369.5| Homo sapiens chromosome 10 clone RP11-466H6, complete sequence
          Length = 194855

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 34    tttacataacaatttctagt 53
             ||||||||||||||||||||
Sbjct: 60345 tttacataacaatttctagt 60326

---

>emb|CR386125.1| Gallus gallus finished cDNA, clone ChEST319m22
          Length = 798

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 225 gcggctctgcaataccactcccac 248
           |||||||||||||||| |||||||
Sbjct: 551 gcggctctgcaatacctctcccac 574

---

>gb|AC161117.4| Mus musculus BAC clone RP24-146I24 from chromosome 13, complete sequence
          Length = 195710

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 296    gaatcaccttccttgacctc 315
              ||||||||||||||||||||
Sbjct: 169855 gaatcaccttccttgacctc 169874

---

>dbj|AK048774.1| Mus musculus 0 day neonate cerebellum cDNA, RIKEN full-length
            enriched library, clone:C230060D03
            product:unclassifiable, full insert sequence
          Length = 2881

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 250  gttgagaaccaccaccttac 269
            ||||||||||||||||||||
Sbjct: 1221 gttgagaaccaccaccttac 1240

---

>emb|BX931631.2| Gallus gallus finished cDNA, clone ChEST406h3
          Length = 1108

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 225 gcggctctgcaataccactcccac 248
           |||||||||||||||| |||||||
Sbjct: 599 gcggctctgcaatacctctcccac 622

---

>gb|AC078955.25| Homo sapiens 12 BAC RP11-543H12 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 159577

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 18    atctatgtttgttttgttta 37
             ||||||||||||||||||||
Sbjct: 21631 atctatgtttgttttgttta 21612

---

>dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete genome
          Length = 1849742

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                           
Query: 305     tccttgacctcgccagccagcatcttct 332
               |||||||||||||| ||||| |||||||
Sbjct: 1412942 tccttgacctcgccggccaggatcttct 1412969

---

>emb|BX510327.10| Zebrafish DNA sequence from clone CH211-253J24 in linkage group 20,
              complete sequence
          Length = 200187

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 29     ttttgtttacataacaattt 48
              ||||||||||||||||||||
Sbjct: 190942 ttttgtttacataacaattt 190923

---

>emb|BX537133.3| Zebrafish DNA sequence from clone DKEY-90M5 in linkage group 20, complete
              sequence
          Length = 249791

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 29     ttttgtttacataacaattt 48
              ||||||||||||||||||||
Sbjct: 245860 ttttgtttacataacaattt 245879

---

>gb|AC149277.11| Mus musculus BAC clone RP24-213J23 from chromosome 7, complete sequence
          Length = 198579

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 250    gttgagaaccaccaccttac 269
              ||||||||||||||||||||
Sbjct: 174573 gttgagaaccaccaccttac 174554

---

>gb|U29376.1| Caenorhabditis elegans cosmid E01H11, complete sequence
          Length = 39569

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 20    ctatgtttgttttgtttaca 39
             ||||||||||||||||||||
Sbjct: 33069 ctatgtttgttttgtttaca 33050

---

>gb|AE017221.1| Thermus thermophilus HB27, complete genome
          Length = 1894877

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                           
Query: 305     tccttgacctcgccagccagcatcttct 332
               |||||||||||||| ||||| |||||||
Sbjct: 1089937 tccttgacctcgccggccaggatcttct 1089964

---

>emb|CT030233.6| Mouse DNA sequence from clone RP24-103C16 on chromosome 14, complete
              sequence
          Length = 216332

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 24     gtttgttttgtttacataac 43
              ||||||||||||||||||||
Sbjct: 125029 gtttgttttgtttacataac 125010

---

>gb|AC141328.4| Mus musculus BAC clone RP23-204P22 from 6, complete sequence
          Length = 194430

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 281    acatcaacaatagcagaatc 300
              ||||||||||||||||||||
Sbjct: 140537 acatcaacaatagcagaatc 140518

---

>gb|AC161461.5| Mus musculus BAC clone RP23-104L7 from chromosome 13, complete sequence
          Length = 234110

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 296   gaatcaccttccttgacctc 315
             ||||||||||||||||||||
Sbjct: 19837 gaatcaccttccttgacctc 19856

---

>emb|AL844166.6| Mouse DNA sequence from clone RP23-107K21 on chromosome 2, complete
              sequence
          Length = 215505

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 19     tctatgtttgttttgtttac 38
              ||||||||||||||||||||
Sbjct: 209416 tctatgtttgttttgtttac 209397

---

>dbj|AB012390.1| Thermus thermophilus genes for DnaK, GrpE, DnaJ, DafA, ClpB, complete
            cds
          Length = 6480

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 305  tccttgacctcgccagccagcatcttct 332
            |||||||||||||| ||||| |||||||
Sbjct: 6374 tccttgacctcgccggccaggatcttct 6347

---

>dbj|AB032368.1| Thermus thermophilus clpB, dafA, dnaJ, grpE, dnaK, ftsH genes,
           complete cds
          Length = 9000

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 305 tccttgacctcgccagccagcatcttct 332
           |||||||||||||| ||||| |||||||
Sbjct: 107 tccttgacctcgccggccaggatcttct 134


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,050,020
Number of Sequences: 3902068
Number of extensions: 6050020
Number of successful extensions: 152151
Number of sequences better than 10.0: 88
Number of HSP's better than 10.0 without gapping: 88
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 151704
Number of HSP's gapped (non-prelim): 432
length of query: 643
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 620
effective length of database: 17,143,297,704
effective search space: 10628844576480
effective search space used: 10628844576480
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

---