ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal16l12
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1OSR8_ORYSA (Q9LRI7) Hydrophobic protein OSR8 81 3e-15
2RC24_ARATH (Q9SUI0) Hypothetical UPF0057 protein At4g30660 70 6e-12
3LTI6A_ORYSA (Q8H5T6) Hydrophobic protein LTI6A (Low temperature-... 70 8e-12
4LTI6B_ORYSA (Q6AT93) Hydrophobic protein LTI6B (Low temperature-... 69 1e-11
5RC22_ARATH (O82232) Hypothetical UPF0057 protein At2g24040 69 2e-11
6RCI2A_ARATH (Q9ZNQ7) Hydrophobic protein RCI2A (Low temperature ... 67 4e-11
7LT02_HORVU (Q9ARD5) Low temperature-induced protein lt101.2 65 2e-10
8RCI2B_ARATH (Q9ZNS6) Hydrophobic protein RCI2B (Low temperature ... 64 3e-10
9LT01_HORVU (P68179) Low temperature-induced protein lt101.1 (Blt... 64 3e-10
10ESI3_LOPEL (P68178) Salt stress-induced hydrophobic peptide ESI3 64 3e-10
11RC23_ARATH (Q9M095) Hypothetical UPF0057 protein At4g30650 62 2e-09
12YCU4_CAEEL (Q22701) Hypothetical UPF0057 protein T23F2.4 in chro... 55 2e-07
13RIC1_PHYIN (Q9Y068) Protein Ric1 55 2e-07
14Y567_PSEAE (Q9I5W9) Hypothetical UPF0057 protein PA0567 54 3e-07
15RC21_ARATH (Q9FE70) Hypothetical UPF0057 protein At1g57550 54 3e-07
16YCU3_CAEEL (Q22700) Hypothetical UPF0057 protein T23F2.3 in chro... 53 1e-06
17YCU5_CAEEL (Q22702) Hypothetical UPF0057 protein T23F2.5 in chro... 49 1e-05
18SNA4_YEAST (Q07549) Protein SNA4 48 3e-05
19YC19_SCHPO (O74837) Hypothetical UPF0057 protein C1183.09c in ch... 44 3e-04
20PMP3_YEAST (P87284) Plasma membrane proteolipid 3 44 6e-04
21YQAE_ECOLI (P0AE42) Hypothetical UPF0057 protein yqaE 43 8e-04
22YQAE_ECOL6 (P0AE43) Hypothetical UPF0057 protein yqaE 43 8e-04
23YQAE_ECO57 (P0AE44) Hypothetical UPF0057 protein yqaE 43 8e-04
24Y1169_SYNY3 (P74805) Hypothetical UPF0057 protein ssr1169 42 0.002
25SNA2_YEAST (P56508) Protein SNA2 42 0.002
26YOT0_CAEEL (P34655) Hypothetical UPF0057 protein ZK632.10 in chr... 41 0.003
27PMP3_CANAL (Q9P824) Plasma membrane proteolipid 3 homolog 39 0.015
28YAM5_CAEEL (Q17638) Hypothetical UPF0057 protein C04G6.5 in chro... 38 0.025
29SNA3_YEAST (P14359) Protein SNA3 36 0.095
30YV31_CAEEL (Q20516) Hypothetical UPF0057 protein F47B7.1 in chro... 33 0.61
31AACC9_MICCH (P29810) Aminoglycoside N(3')-acetyltransferase IX (... 30 5.2
32DAXX_HUMAN (Q9UER7) Death domain-associated protein 6 (Daxx) (hD... 30 8.9

>OSR8_ORYSA (Q9LRI7) Hydrophobic protein OSR8|
          Length = 72

 Score = 81.3 bits (199), Expect = 3e-15
 Identities = 38/57 (66%), Positives = 46/57 (80%)
 Frame = -3

Query: 529 MSSGGCSTCLEIIFAAVLPPLGVFFRYGWCSSEFFISLPLTMLGYVPGIIYSVYVIL 359
           M+SG C T LEI+ A +LPPLGVF R+G CS EF I L LT+LGYVPGIIY+VYV++
Sbjct: 1   MASGRCCTFLEILLAIILPPLGVFLRFGCCSMEFCICLLLTILGYVPGIIYAVYVLV 57



to top

>RC24_ARATH (Q9SUI0) Hypothetical UPF0057 protein At4g30660|
          Length = 74

 Score = 70.1 bits (170), Expect = 6e-12
 Identities = 37/68 (54%), Positives = 44/68 (64%)
 Frame = -3

Query: 514 CSTCLEIIFAAVLPPLGVFFRYGWCSSEFFISLPLTMLGYVPGIIYSVYVILKTPPELPS 335
           C    EII A +LPPLGV FR G C+ EF I L LT+LGYVPGIIY++YVI+    E   
Sbjct: 5   CEILCEIIIAILLPPLGVCFRKGCCTVEFLICLVLTILGYVPGIIYAIYVIVFQHREEYF 64

Query: 334 IDGDRPYY 311
            +  RP Y
Sbjct: 65  DEYRRPIY 72



to top

>LTI6A_ORYSA (Q8H5T6) Hydrophobic protein LTI6A (Low temperature-induced protein|
           6A)
          Length = 56

 Score = 69.7 bits (169), Expect = 8e-12
 Identities = 32/52 (61%), Positives = 42/52 (80%)
 Frame = -3

Query: 511 STCLEIIFAAVLPPLGVFFRYGWCSSEFFISLPLTMLGYVPGIIYSVYVILK 356
           +TC++II A +LPPLGVFF++G C  EF+I L LT  GY+PGIIY+V+VI K
Sbjct: 6   ATCIDIILAIILPPLGVFFKFG-CGIEFWICLLLTFFGYLPGIIYAVWVITK 56



to top

>LTI6B_ORYSA (Q6AT93) Hydrophobic protein LTI6B (Low temperature-induced protein|
           6B)
          Length = 55

 Score = 69.3 bits (168), Expect = 1e-11
 Identities = 30/54 (55%), Positives = 41/54 (75%)
 Frame = -3

Query: 517 GCSTCLEIIFAAVLPPLGVFFRYGWCSSEFFISLPLTMLGYVPGIIYSVYVILK 356
           G + C++I+ A +LPPLGVF ++G C  EF+I L LT LGY+PGIIY++Y I K
Sbjct: 3   GTANCIDILIAIILPPLGVFLKFG-CGHEFWICLLLTFLGYIPGIIYAIYAITK 55



to top

>RC22_ARATH (O82232) Hypothetical UPF0057 protein At2g24040|
          Length = 75

 Score = 68.6 bits (166), Expect = 2e-11
 Identities = 30/54 (55%), Positives = 38/54 (70%)
 Frame = -3

Query: 523 SGGCSTCLEIIFAAVLPPLGVFFRYGWCSSEFFISLPLTMLGYVPGIIYSVYVI 362
           +  C  C EI  A +LPP+GV  R+G C+ EFFI L LT LGY+PGIIY++Y I
Sbjct: 2   ASSCELCCEIFIAILLPPVGVCLRHGCCTVEFFICLILTCLGYLPGIIYAIYAI 55



to top

>RCI2A_ARATH (Q9ZNQ7) Hydrophobic protein RCI2A (Low temperature and|
           salt-responsive protein LTI6A)
          Length = 54

 Score = 67.4 bits (163), Expect = 4e-11
 Identities = 31/52 (59%), Positives = 42/52 (80%)
 Frame = -3

Query: 511 STCLEIIFAAVLPPLGVFFRYGWCSSEFFISLPLTMLGYVPGIIYSVYVILK 356
           +T ++II A +LPPLGVF R+G C  EF+I L LT+LGY+PGIIY++YV+ K
Sbjct: 4   ATFVDIIIAILLPPLGVFLRFG-CGVEFWICLVLTLLGYIPGIIYAIYVLTK 54



to top

>LT02_HORVU (Q9ARD5) Low temperature-induced protein lt101.2|
          Length = 54

 Score = 65.1 bits (157), Expect = 2e-10
 Identities = 30/51 (58%), Positives = 42/51 (82%)
 Frame = -3

Query: 511 STCLEIIFAAVLPPLGVFFRYGWCSSEFFISLPLTMLGYVPGIIYSVYVIL 359
           +T +E+I A +LPP+GVF RYG  + EF+I L LT+LGY+PGIIY+VYV++
Sbjct: 4   ATFIEVILAIILPPVGVFLRYG-LAVEFWICLLLTLLGYIPGIIYAVYVLV 53



to top

>RCI2B_ARATH (Q9ZNS6) Hydrophobic protein RCI2B (Low temperature and|
           salt-responsive protein LTI6B)
          Length = 54

 Score = 64.3 bits (155), Expect = 3e-10
 Identities = 29/52 (55%), Positives = 41/52 (78%)
 Frame = -3

Query: 511 STCLEIIFAAVLPPLGVFFRYGWCSSEFFISLPLTMLGYVPGIIYSVYVILK 356
           +T +EII A +LPPLGVF ++G C  EF+I L LT+ GY+PGI+Y++Y+I K
Sbjct: 4   ATFVEIILAIILPPLGVFLKFG-CKVEFWICLILTLFGYLPGILYALYIITK 54



to top

>LT01_HORVU (P68179) Low temperature-induced protein lt101.1 (Blt101)|
           (Blt101.1)
          Length = 54

 Score = 64.3 bits (155), Expect = 3e-10
 Identities = 31/53 (58%), Positives = 41/53 (77%)
 Frame = -3

Query: 517 GCSTCLEIIFAAVLPPLGVFFRYGWCSSEFFISLPLTMLGYVPGIIYSVYVIL 359
           G +T LE+I A +LPP+GVF RY     EF+I L LT+LGY+PGIIY+VYV++
Sbjct: 2   GSATVLEVILAIILPPVGVFLRYK-LGVEFWICLLLTILGYIPGIIYAVYVLV 53



to top

>ESI3_LOPEL (P68178) Salt stress-induced hydrophobic peptide ESI3|
          Length = 54

 Score = 64.3 bits (155), Expect = 3e-10
 Identities = 31/53 (58%), Positives = 41/53 (77%)
 Frame = -3

Query: 517 GCSTCLEIIFAAVLPPLGVFFRYGWCSSEFFISLPLTMLGYVPGIIYSVYVIL 359
           G +T LE+I A +LPP+GVF RY     EF+I L LT+LGY+PGIIY+VYV++
Sbjct: 2   GSATVLEVILAIILPPVGVFLRYK-LGVEFWICLLLTILGYIPGIIYAVYVLV 53



to top

>RC23_ARATH (Q9M095) Hypothetical UPF0057 protein At4g30650|
          Length = 73

 Score = 62.0 bits (149), Expect = 2e-09
 Identities = 28/47 (59%), Positives = 37/47 (78%)
 Frame = -3

Query: 499 EIIFAAVLPPLGVFFRYGWCSSEFFISLPLTMLGYVPGIIYSVYVIL 359
           EI+ A +LPPLGV  + G C+ EF I L LT+LGY+PGIIY++YVI+
Sbjct: 10  EILIAILLPPLGVCLKRGCCTVEFLICLVLTILGYIPGIIYALYVIV 56



to top

>YCU4_CAEEL (Q22701) Hypothetical UPF0057 protein T23F2.4 in chromosome X|
          Length = 57

 Score = 55.5 bits (132), Expect = 2e-07
 Identities = 27/53 (50%), Positives = 38/53 (71%), Gaps = 3/53 (5%)
 Frame = -3

Query: 508 TCLEI---IFAAVLPPLGVFFRYGWCSSEFFISLPLTMLGYVPGIIYSVYVIL 359
           TC++I   +FA +LPP+GVF   G C+    I + LT+LGY+PGIIY+ Y+IL
Sbjct: 4   TCMDIPKFLFALLLPPVGVFLEKG-CTHHLAICILLTILGYIPGIIYACYIIL 55



to top

>RIC1_PHYIN (Q9Y068) Protein Ric1|
          Length = 57

 Score = 55.5 bits (132), Expect = 2e-07
 Identities = 22/53 (41%), Positives = 39/53 (73%)
 Frame = -3

Query: 514 CSTCLEIIFAAVLPPLGVFFRYGWCSSEFFISLPLTMLGYVPGIIYSVYVILK 356
           C     +I + ++PP+GVFF+ G C+ +  I+  LT+LGY+PG+I++VY+++K
Sbjct: 5   CGDIPRLICSVIIPPVGVFFQVG-CTKDLAINCLLTVLGYIPGVIHAVYILIK 56



to top

>Y567_PSEAE (Q9I5W9) Hypothetical UPF0057 protein PA0567|
          Length = 52

 Score = 54.3 bits (129), Expect = 3e-07
 Identities = 23/49 (46%), Positives = 38/49 (77%)
 Frame = -3

Query: 502 LEIIFAAVLPPLGVFFRYGWCSSEFFISLPLTMLGYVPGIIYSVYVILK 356
           + I+ A +LPPLGVF + G+    F++++ LT+LGY+PGI+++VY+I K
Sbjct: 4   IRILIAILLPPLGVFLQVGF-GGAFWLNILLTLLGYIPGIVHAVYIIAK 51



to top

>RC21_ARATH (Q9FE70) Hypothetical UPF0057 protein At1g57550|
          Length = 52

 Score = 54.3 bits (129), Expect = 3e-07
 Identities = 23/49 (46%), Positives = 36/49 (73%)
 Frame = -3

Query: 502 LEIIFAAVLPPLGVFFRYGWCSSEFFISLPLTMLGYVPGIIYSVYVILK 356
           LE++ A  +PP+GVF RYG    EF++ L LT+  ++PG+IY++YV+ K
Sbjct: 5   LEVLCAIFIPPVGVFLRYG-LGLEFWVCLLLTLFAFIPGLIYAIYVLTK 52



to top

>YCU3_CAEEL (Q22700) Hypothetical UPF0057 protein T23F2.3 in chromosome X|
          Length = 57

 Score = 52.8 bits (125), Expect = 1e-06
 Identities = 26/52 (50%), Positives = 34/52 (65%)
 Frame = -3

Query: 514 CSTCLEIIFAAVLPPLGVFFRYGWCSSEFFISLPLTMLGYVPGIIYSVYVIL 359
           C+   + I A +LPP+GVF   G C     I + LT+LGY+PGIIY+ YVIL
Sbjct: 5   CTDIPKFICAVLLPPIGVFLEKG-CDYHLAICILLTILGYIPGIIYACYVIL 55



to top

>YCU5_CAEEL (Q22702) Hypothetical UPF0057 protein T23F2.5 in chromosome X|
          Length = 57

 Score = 48.9 bits (115), Expect = 1e-05
 Identities = 23/52 (44%), Positives = 36/52 (69%)
 Frame = -3

Query: 514 CSTCLEIIFAAVLPPLGVFFRYGWCSSEFFISLPLTMLGYVPGIIYSVYVIL 359
           C+   + + A +LPP+GV+   G C+    I++ LT+LGY+PGII++ YVIL
Sbjct: 5   CTDIPKFLCALLLPPIGVWLEKG-CTYHLAINILLTILGYIPGIIHACYVIL 55



to top

>SNA4_YEAST (Q07549) Protein SNA4|
          Length = 140

 Score = 47.8 bits (112), Expect = 3e-05
 Identities = 21/49 (42%), Positives = 32/49 (65%)
 Frame = -3

Query: 493 IFAAVLPPLGVFFRYGWCSSEFFISLPLTMLGYVPGIIYSVYVILKTPP 347
           I A   PP  V  R G CSS+F +++ LT+LG++PG++++ Y I  T P
Sbjct: 17  IVAFFFPPAAVLLRSGPCSSDFLLNVLLTLLGFLPGMLHAFYYITITSP 65



to top

>YC19_SCHPO (O74837) Hypothetical UPF0057 protein C1183.09c in chromosome III|
          Length = 105

 Score = 44.3 bits (103), Expect = 3e-04
 Identities = 22/60 (36%), Positives = 40/60 (66%)
 Frame = -3

Query: 529 MSSGGCSTCLEIIFAAVLPPLGVFFRYGWCSSEFFISLPLTMLGYVPGIIYSVYVILKTP 350
           MS+   S  L I+ +  +P + V  R G+C+++F I++ L  LG +PGII+++Y+++K P
Sbjct: 1   MSNVTLSDFLLIVLSFFVPFIVVGIRRGFCTADFLINICLCALG-IPGIIHAIYIVIKYP 59



to top

>PMP3_YEAST (P87284) Plasma membrane proteolipid 3|
          Length = 55

 Score = 43.5 bits (101), Expect = 6e-04
 Identities = 17/49 (34%), Positives = 33/49 (67%)
 Frame = -3

Query: 502 LEIIFAAVLPPLGVFFRYGWCSSEFFISLPLTMLGYVPGIIYSVYVILK 356
           + II +  LPP+ VF   GW  ++  + + LT+L + PG++Y++Y++L+
Sbjct: 7   INIILSLFLPPVAVFLARGW-GTDCIVDIILTILAWFPGMLYALYIVLQ 54



to top

>YQAE_ECOLI (P0AE42) Hypothetical UPF0057 protein yqaE|
          Length = 52

 Score = 43.1 bits (100), Expect = 8e-04
 Identities = 20/46 (43%), Positives = 31/46 (67%), Gaps = 2/46 (4%)
 Frame = -3

Query: 496 IIFAAVLPPLGVFFR--YGWCSSEFFISLPLTMLGYVPGIIYSVYV 365
           I+   +LPPLGV     +GW    F I++ LT+LGY+PG+I++ +V
Sbjct: 6   IVITIILPPLGVLLGKGFGWA---FIINILLTLLGYIPGLIHAFWV 48



to top

>YQAE_ECOL6 (P0AE43) Hypothetical UPF0057 protein yqaE|
          Length = 52

 Score = 43.1 bits (100), Expect = 8e-04
 Identities = 20/46 (43%), Positives = 31/46 (67%), Gaps = 2/46 (4%)
 Frame = -3

Query: 496 IIFAAVLPPLGVFFR--YGWCSSEFFISLPLTMLGYVPGIIYSVYV 365
           I+   +LPPLGV     +GW    F I++ LT+LGY+PG+I++ +V
Sbjct: 6   IVITIILPPLGVLLGKGFGWA---FIINILLTLLGYIPGLIHAFWV 48



to top

>YQAE_ECO57 (P0AE44) Hypothetical UPF0057 protein yqaE|
          Length = 52

 Score = 43.1 bits (100), Expect = 8e-04
 Identities = 20/46 (43%), Positives = 31/46 (67%), Gaps = 2/46 (4%)
 Frame = -3

Query: 496 IIFAAVLPPLGVFFR--YGWCSSEFFISLPLTMLGYVPGIIYSVYV 365
           I+   +LPPLGV     +GW    F I++ LT+LGY+PG+I++ +V
Sbjct: 6   IVITIILPPLGVLLGKGFGWA---FIINILLTLLGYIPGLIHAFWV 48



to top

>Y1169_SYNY3 (P74805) Hypothetical UPF0057 protein ssr1169|
          Length = 54

 Score = 42.0 bits (97), Expect = 0.002
 Identities = 21/50 (42%), Positives = 37/50 (74%), Gaps = 1/50 (2%)
 Frame = -3

Query: 502 LEIIFAAVLPPLGVFFRYGWCSSEFFISLPLTMLG-YVPGIIYSVYVILK 356
           ++II A +LPPLGVF + G    +F+I+L LT+ G Y+ G++++++VI +
Sbjct: 4   VKIICAILLPPLGVFLQVG-IGKDFWINLLLTIFGLYILGLVHAIWVIAR 52



to top

>SNA2_YEAST (P56508) Protein SNA2|
          Length = 79

 Score = 41.6 bits (96), Expect = 0.002
 Identities = 18/51 (35%), Positives = 32/51 (62%)
 Frame = -3

Query: 496 IIFAAVLPPLGVFFRYGWCSSEFFISLPLTMLGYVPGIIYSVYVILKTPPE 344
           +  A  +PPL V+ + G+ + +  I+  L +LG+ PG+I+++YVI   P E
Sbjct: 9   VFIAIFIPPLAVWLKRGFFTKDLLINFLLFLLGFFPGLIHALYVISCHPYE 59



to top

>YOT0_CAEEL (P34655) Hypothetical UPF0057 protein ZK632.10 in chromosome III|
          Length = 80

 Score = 41.2 bits (95), Expect = 0.003
 Identities = 20/45 (44%), Positives = 29/45 (64%)
 Frame = -3

Query: 493 IFAAVLPPLGVFFRYGWCSSEFFISLPLTMLGYVPGIIYSVYVIL 359
           I A  LPP+ V    G C+ +  I++ LT LG +PGII++ Y+IL
Sbjct: 8   ILAIFLPPIAVLLDVG-CNCDLLINILLTCLGIIPGIIHAWYIIL 51



to top

>PMP3_CANAL (Q9P824) Plasma membrane proteolipid 3 homolog|
          Length = 55

 Score = 38.9 bits (89), Expect = 0.015
 Identities = 18/49 (36%), Positives = 33/49 (67%)
 Frame = -3

Query: 502 LEIIFAAVLPPLGVFFRYGWCSSEFFISLPLTMLGYVPGIIYSVYVILK 356
           +E+I A  LPP+ VF + G  ++  +I+L L +  + P I++++YV+LK
Sbjct: 7   IEVIIAIFLPPVAVFMKCG-ATTPLWINLVLCIFIWFPAILHALYVVLK 54



to top

>YAM5_CAEEL (Q17638) Hypothetical UPF0057 protein C04G6.5 in chromosome II|
          Length = 59

 Score = 38.1 bits (87), Expect = 0.025
 Identities = 15/46 (32%), Positives = 27/46 (58%)
 Frame = -3

Query: 502 LEIIFAAVLPPLGVFFRYGWCSSEFFISLPLTMLGYVPGIIYSVYV 365
           +E+I    LPPL +++    C     I +   +L ++PGI+Y+VY+
Sbjct: 9   IEVILCIFLPPLAIWWHTKECDINVLIDIIFCLLFWLPGILYAVYI 54



to top

>SNA3_YEAST (P14359) Protein SNA3|
          Length = 133

 Score = 36.2 bits (82), Expect = 0.095
 Identities = 17/53 (32%), Positives = 32/53 (60%)
 Frame = -3

Query: 502 LEIIFAAVLPPLGVFFRYGWCSSEFFISLPLTMLGYVPGIIYSVYVILKTPPE 344
           L ++ A  +PP+ V+ R G  + +  ++L L +L + P II++ YV+ +T  E
Sbjct: 23  LLMVLAVFIPPVAVWKRKGMFNRDTLLNLLLFLLLFFPAIIHACYVVYETSSE 75



to top

>YV31_CAEEL (Q20516) Hypothetical UPF0057 protein F47B7.1 in chromosome X|
          Length = 59

 Score = 33.5 bits (75), Expect = 0.61
 Identities = 13/45 (28%), Positives = 26/45 (57%)
 Frame = -3

Query: 502 LEIIFAAVLPPLGVFFRYGWCSSEFFISLPLTMLGYVPGIIYSVY 368
           +E+I A  LPPL +F     C+    +++ L    +VP +I++++
Sbjct: 9   IELILAIFLPPLAIFIHGNDCNMHVAVNIILCFFFFVPAVIHALW 53



to top

>AACC9_MICCH (P29810) Aminoglycoside N(3')-acetyltransferase IX (EC 2.3.1.81)|
           (ACC(3)-IX) (Aminocyclitol 3-N-acetyltransferase type
           IX)
          Length = 281

 Score = 30.4 bits (67), Expect = 5.2
 Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
 Frame = +1

Query: 22  GRDTLIASSRANGSRILVVGEPTDE-PIIHHDTNTCPTNQERTLHVQPPLLKN 177
           G DT +A   A+  R+L++G P D   ++HH         +R +  + P+L N
Sbjct: 154 GPDTPLARLIAHSGRVLLLGAPLDTMTLLHHAEALADVRSKRFVTYEQPILVN 206



to top

>DAXX_HUMAN (Q9UER7) Death domain-associated protein 6 (Daxx) (hDaxx) (Fas|
           death domain-associated protein) (ETS1-associated
           protein 1) (EAP1)
          Length = 740

 Score = 29.6 bits (65), Expect = 8.9
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = +2

Query: 401 EHRQRQRDEELRAAPAVPEEDAERRQHGGEDD 496
           E  + + +EE  A  +  EED E+ Q G EDD
Sbjct: 446 EEEEEEEEEEEEATDSEEEEDLEQMQEGQEDD 477


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 83,267,279
Number of Sequences: 219361
Number of extensions: 1619093
Number of successful extensions: 5345
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 5114
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5325
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6712189044
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top