ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal17a08
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1VATG1_TOBAC (O82702) Vacuolar ATP synthase subunit G 1 (EC 3.6.3... 94 4e-19
2VATG1_ARATH (O82628) Vacuolar ATP synthase subunit G 1 (EC 3.6.3... 92 1e-18
3VATG2_TOBAC (O82703) Vacuolar ATP synthase subunit G 2 (EC 3.6.3... 82 1e-15
4VATG2_ARATH (O82629) Vacuolar ATP synthase subunit G 2 (EC 3.6.3... 80 5e-15
5VATG_CITLI (Q9SP55) Vacuolar ATP synthase subunit G (EC 3.6.3.14... 80 5e-15
6VATG3_ARATH (Q9SZH0) Vacuolar ATP synthase subunit G 3 (EC 3.6.3... 47 4e-05
7DNAK1_SYNEL (Q8DKR6) Chaperone protein dnaK1 (Heat shock protein... 31 2.8
8GDB3_WHEAT (P04730) Gamma-gliadin (Gliadin B-III) (Fragment) 30 8.1

>VATG1_TOBAC (O82702) Vacuolar ATP synthase subunit G 1 (EC 3.6.3.14) (V-ATPase|
           G subunit 1) (Vacuolar proton pump G subunit 1)
          Length = 110

 Score = 94.0 bits (232), Expect = 4e-19
 Identities = 45/58 (77%), Positives = 52/58 (89%)
 Frame = -1

Query: 455 MEADFQRKLTETSGDSGANVKRLEQETNVKIEQLKQQAANISPEVIQMLLRHVTTVKN 282
           MEA+FQRKL +TSGDSGANVKRLEQET+ KIE LK +A  +SP+V+QMLLRHVTTVKN
Sbjct: 53  MEAEFQRKLEQTSGDSGANVKRLEQETDAKIEHLKTEAERVSPDVVQMLLRHVTTVKN 110



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>VATG1_ARATH (O82628) Vacuolar ATP synthase subunit G 1 (EC 3.6.3.14) (V-ATPase|
           G subunit 1) (Vacuolar proton pump G subunit 1)
          Length = 110

 Score = 92.4 bits (228), Expect = 1e-18
 Identities = 45/59 (76%), Positives = 52/59 (88%)
 Frame = -1

Query: 458 QMEADFQRKLTETSGDSGANVKRLEQETNVKIEQLKQQAANISPEVIQMLLRHVTTVKN 282
           Q E DFQRKL ETSGDSGANVKRLEQET+ KIEQLK +A+ IS +V++MLL+HVTTVKN
Sbjct: 52  QTEQDFQRKLEETSGDSGANVKRLEQETDTKIEQLKNEASRISKDVVEMLLKHVTTVKN 110



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>VATG2_TOBAC (O82703) Vacuolar ATP synthase subunit G 2 (EC 3.6.3.14) (V-ATPase|
           G subunit 2) (Vacuolar proton pump G subunit 2)
          Length = 111

 Score = 82.4 bits (202), Expect = 1e-15
 Identities = 41/58 (70%), Positives = 49/58 (84%)
 Frame = -1

Query: 455 MEADFQRKLTETSGDSGANVKRLEQETNVKIEQLKQQAANISPEVIQMLLRHVTTVKN 282
           MEA+FQR + +TSGDSGANVKRLEQET  KI+ LK +A +IS +V+QMLLR VTTVKN
Sbjct: 54  MEAEFQRNVEQTSGDSGANVKRLEQETFAKIQHLKTEAESISHDVVQMLLRQVTTVKN 111



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>VATG2_ARATH (O82629) Vacuolar ATP synthase subunit G 2 (EC 3.6.3.14) (V-ATPase|
           G subunit 2) (Vacuolar proton pump G subunit 2)
          Length = 106

 Score = 80.1 bits (196), Expect = 5e-15
 Identities = 40/57 (70%), Positives = 46/57 (80%)
 Frame = -1

Query: 452 EADFQRKLTETSGDSGANVKRLEQETNVKIEQLKQQAANISPEVIQMLLRHVTTVKN 282
           E  FQRKL  TSGDSGANVKRLEQET+ KIEQLK +A  IS +V+ MLL++VTTV N
Sbjct: 50  EQGFQRKLEATSGDSGANVKRLEQETDAKIEQLKNEATRISKDVVDMLLKNVTTVNN 106



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>VATG_CITLI (Q9SP55) Vacuolar ATP synthase subunit G (EC 3.6.3.14) (V-ATPase G|
           subunit) (Vacuolar proton pump G subunit)
          Length = 110

 Score = 80.1 bits (196), Expect = 5e-15
 Identities = 40/59 (67%), Positives = 46/59 (77%)
 Frame = -1

Query: 458 QMEADFQRKLTETSGDSGANVKRLEQETNVKIEQLKQQAANISPEVIQMLLRHVTTVKN 282
           Q+E +FQRKL E+ GDSGANVKRLEQET VKI  LK  A  I  +V+QM L+HVTTVKN
Sbjct: 52  QVEREFQRKLAESVGDSGANVKRLEQETEVKIHHLKAGAEKIQYDVVQMFLKHVTTVKN 110



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>VATG3_ARATH (Q9SZH0) Vacuolar ATP synthase subunit G 3 (EC 3.6.3.14) (V-ATPase|
           G subunit 3) (Vacuolar proton pump G subunit 3)
          Length = 108

 Score = 47.4 bits (111), Expect = 4e-05
 Identities = 20/56 (35%), Positives = 42/56 (75%)
 Frame = -1

Query: 458 QMEADFQRKLTETSGDSGANVKRLEQETNVKIEQLKQQAANISPEVIQMLLRHVTT 291
           ++E ++Q +++ T  D  A+ KRL+ ET+V+I  LK+ ++ +S ++++ML+++VTT
Sbjct: 52  RLEEEYQTQVSGT--DQEADAKRLDDETDVRITNLKESSSKVSKDIVKMLIKYVTT 105



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>DNAK1_SYNEL (Q8DKR6) Chaperone protein dnaK1 (Heat shock protein 70-1) (Heat|
           shock 70 kDa protein 1) (HSP70-1)
          Length = 651

 Score = 31.2 bits (69), Expect = 2.8
 Identities = 13/53 (24%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
 Frame = -1

Query: 434 KLTETSGDSGANVKRLEQETNV--KIEQLKQQAANISPEVIQMLLRHVTTVKN 282
           ++T   G S   ++R+ QE  +  +++Q+K++ A +  +   +L  + +T+KN
Sbjct: 496 RITNRGGLSSMEIERMRQEAQIYAQVDQIKKEIAELRNQADALLYSYESTIKN 548



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>GDB3_WHEAT (P04730) Gamma-gliadin (Gliadin B-III) (Fragment)|
          Length = 244

 Score = 29.6 bits (65), Expect = 8.1
 Identities = 16/46 (34%), Positives = 26/46 (56%)
 Frame = +2

Query: 152 FPRQRTRNYSWKWQKPFLITPPKEINR*YKVVIIICRADSSTFSSS 289
           FP Q  +++ W+ Q+PFL  P +   +  +VV II  A  +T  S+
Sbjct: 5   FPLQPQQSFLWQSQQPFLQQPQQPSPQPQQVVQIISPATPTTIPSA 50


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 82,511,506
Number of Sequences: 219361
Number of extensions: 1508689
Number of successful extensions: 4184
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 4099
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4184
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6143359464
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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