| Clone Name | rbaal17a08 |
|---|---|
| Clone Library Name | barley_pub |
>VATG1_TOBAC (O82702) Vacuolar ATP synthase subunit G 1 (EC 3.6.3.14) (V-ATPase| G subunit 1) (Vacuolar proton pump G subunit 1) Length = 110 Score = 94.0 bits (232), Expect = 4e-19 Identities = 45/58 (77%), Positives = 52/58 (89%) Frame = -1 Query: 455 MEADFQRKLTETSGDSGANVKRLEQETNVKIEQLKQQAANISPEVIQMLLRHVTTVKN 282 MEA+FQRKL +TSGDSGANVKRLEQET+ KIE LK +A +SP+V+QMLLRHVTTVKN Sbjct: 53 MEAEFQRKLEQTSGDSGANVKRLEQETDAKIEHLKTEAERVSPDVVQMLLRHVTTVKN 110
>VATG1_ARATH (O82628) Vacuolar ATP synthase subunit G 1 (EC 3.6.3.14) (V-ATPase| G subunit 1) (Vacuolar proton pump G subunit 1) Length = 110 Score = 92.4 bits (228), Expect = 1e-18 Identities = 45/59 (76%), Positives = 52/59 (88%) Frame = -1 Query: 458 QMEADFQRKLTETSGDSGANVKRLEQETNVKIEQLKQQAANISPEVIQMLLRHVTTVKN 282 Q E DFQRKL ETSGDSGANVKRLEQET+ KIEQLK +A+ IS +V++MLL+HVTTVKN Sbjct: 52 QTEQDFQRKLEETSGDSGANVKRLEQETDTKIEQLKNEASRISKDVVEMLLKHVTTVKN 110
>VATG2_TOBAC (O82703) Vacuolar ATP synthase subunit G 2 (EC 3.6.3.14) (V-ATPase| G subunit 2) (Vacuolar proton pump G subunit 2) Length = 111 Score = 82.4 bits (202), Expect = 1e-15 Identities = 41/58 (70%), Positives = 49/58 (84%) Frame = -1 Query: 455 MEADFQRKLTETSGDSGANVKRLEQETNVKIEQLKQQAANISPEVIQMLLRHVTTVKN 282 MEA+FQR + +TSGDSGANVKRLEQET KI+ LK +A +IS +V+QMLLR VTTVKN Sbjct: 54 MEAEFQRNVEQTSGDSGANVKRLEQETFAKIQHLKTEAESISHDVVQMLLRQVTTVKN 111
>VATG2_ARATH (O82629) Vacuolar ATP synthase subunit G 2 (EC 3.6.3.14) (V-ATPase| G subunit 2) (Vacuolar proton pump G subunit 2) Length = 106 Score = 80.1 bits (196), Expect = 5e-15 Identities = 40/57 (70%), Positives = 46/57 (80%) Frame = -1 Query: 452 EADFQRKLTETSGDSGANVKRLEQETNVKIEQLKQQAANISPEVIQMLLRHVTTVKN 282 E FQRKL TSGDSGANVKRLEQET+ KIEQLK +A IS +V+ MLL++VTTV N Sbjct: 50 EQGFQRKLEATSGDSGANVKRLEQETDAKIEQLKNEATRISKDVVDMLLKNVTTVNN 106
>VATG_CITLI (Q9SP55) Vacuolar ATP synthase subunit G (EC 3.6.3.14) (V-ATPase G| subunit) (Vacuolar proton pump G subunit) Length = 110 Score = 80.1 bits (196), Expect = 5e-15 Identities = 40/59 (67%), Positives = 46/59 (77%) Frame = -1 Query: 458 QMEADFQRKLTETSGDSGANVKRLEQETNVKIEQLKQQAANISPEVIQMLLRHVTTVKN 282 Q+E +FQRKL E+ GDSGANVKRLEQET VKI LK A I +V+QM L+HVTTVKN Sbjct: 52 QVEREFQRKLAESVGDSGANVKRLEQETEVKIHHLKAGAEKIQYDVVQMFLKHVTTVKN 110
>VATG3_ARATH (Q9SZH0) Vacuolar ATP synthase subunit G 3 (EC 3.6.3.14) (V-ATPase| G subunit 3) (Vacuolar proton pump G subunit 3) Length = 108 Score = 47.4 bits (111), Expect = 4e-05 Identities = 20/56 (35%), Positives = 42/56 (75%) Frame = -1 Query: 458 QMEADFQRKLTETSGDSGANVKRLEQETNVKIEQLKQQAANISPEVIQMLLRHVTT 291 ++E ++Q +++ T D A+ KRL+ ET+V+I LK+ ++ +S ++++ML+++VTT Sbjct: 52 RLEEEYQTQVSGT--DQEADAKRLDDETDVRITNLKESSSKVSKDIVKMLIKYVTT 105
>DNAK1_SYNEL (Q8DKR6) Chaperone protein dnaK1 (Heat shock protein 70-1) (Heat| shock 70 kDa protein 1) (HSP70-1) Length = 651 Score = 31.2 bits (69), Expect = 2.8 Identities = 13/53 (24%), Positives = 31/53 (58%), Gaps = 2/53 (3%) Frame = -1 Query: 434 KLTETSGDSGANVKRLEQETNV--KIEQLKQQAANISPEVIQMLLRHVTTVKN 282 ++T G S ++R+ QE + +++Q+K++ A + + +L + +T+KN Sbjct: 496 RITNRGGLSSMEIERMRQEAQIYAQVDQIKKEIAELRNQADALLYSYESTIKN 548
>GDB3_WHEAT (P04730) Gamma-gliadin (Gliadin B-III) (Fragment)| Length = 244 Score = 29.6 bits (65), Expect = 8.1 Identities = 16/46 (34%), Positives = 26/46 (56%) Frame = +2 Query: 152 FPRQRTRNYSWKWQKPFLITPPKEINR*YKVVIIICRADSSTFSSS 289 FP Q +++ W+ Q+PFL P + + +VV II A +T S+ Sbjct: 5 FPLQPQQSFLWQSQQPFLQQPQQPSPQPQQVVQIISPATPTTIPSA 50 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 82,511,506 Number of Sequences: 219361 Number of extensions: 1508689 Number of successful extensions: 4184 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 4099 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4184 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6143359464 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)