ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal16j13
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AB257219.1| Phragmites australis PhaHAK4 mRNA for potassium ... 287 2e-74
2dbj|AB257218.1| Phragmites australis PhaHAK4 mRNA for potassium ... 287 2e-74
3ref|XM_450750.1| Oryza sativa (japonica cultivar-group), mRNA 260 5e-66
4dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 260 5e-66
5dbj|AP005838.3| Oryza sativa (japonica cultivar-group) genomic D... 260 5e-66
6dbj|AP005637.2| Oryza sativa (japonica cultivar-group) genomic D... 260 5e-66
7dbj|AK099766.1| Oryza sativa (japonica cultivar-group) cDNA clon... 260 5e-66
8dbj|AK070831.1| Oryza sativa (japonica cultivar-group) cDNA clon... 260 5e-66
9gb|AY106754.1| Zea mays PCO067360 mRNA sequence 244 3e-61
10gb|AY111302.1| Zea mays CL24961_1 mRNA sequence 70 1e-08
11dbj|AB257217.1| Phragmites australis PhaHAK4 mRNA for potassium ... 62 2e-06
12dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 62 2e-06
13dbj|AP005185.4| Oryza sativa (japonica cultivar-group) genomic D... 62 2e-06
14dbj|AK106582.1| Oryza sativa (japonica cultivar-group) cDNA clon... 62 2e-06
15dbj|AP003815.2| Oryza sativa (japonica cultivar-group) genomic D... 62 2e-06
16gb|CP000155.1| Hahella chejuensis KCTC 2396, complete genome 44 0.55
17gb|AY485619.1| Cryphonectria parasitica DNA-dependent RNA polyme... 42 2.2
18ref|NM_202821.1| Arabidopsis thaliana unknown protein AT4G14905 ... 40 8.6
19ref|NM_179056.1| Arabidopsis thaliana unknown protein AT4G14905 ... 40 8.6
20gb|AC161352.7| Mus musculus chromosome 3, clone RP23-129N8, comp... 40 8.6
21gb|AC133457.6| Mus musculus chromosome 3, clone RP24-493E2, comp... 40 8.6
22ref|NM_011058.1| Mus musculus platelet derived growth factor rec... 40 8.6
23gb|AC121873.3| Mus musculus BAC clone RP24-123L3 from chromosome... 40 8.6
24gb|AC102352.9| Mus musculus chromosome 14, clone RP23-30H7, comp... 40 8.6
25gb|BC004099.1| Mus musculus aminolevulinic acid synthase 1, mRNA... 40 8.6
26emb|AJ276865.1|STU276865 Solanum tuberosum partial ure gene for ... 40 8.6
27emb|AJ276864.1|STU276864 Solanum tuberosum partial adk gene for ... 40 8.6
28gb|AC002307.1|HUAC002307 Homo sapiens Chromosome 16 BAC clone CI... 40 8.6
29ref|XM_807160.1| Trypanosoma cruzi strain CL Brener hypothetical... 40 8.6
30gb|AC114938.3| Homo sapiens chromosome 16 clone CTD-2244D9, comp... 40 8.6
31gb|AY152836.1| Felis catus clone BAC 160a17 major histocompatibl... 40 8.6
32emb|Z97337.2|ATFCA2 Arabidopsis thaliana DNA chromosome 4, ESSA ... 40 8.6
33gb|AC160997.5| Mus musculus BAC clone RP23-68E4 from chromosome ... 40 8.6
34gb|AC141070.2| Homo sapiens chromosome 16 clone RP11-171B13, com... 40 8.6
35gb|BC022110.1| Mus musculus aminolevulinic acid synthase 1, mRNA... 40 8.6
36gb|AC068050.6| Homo sapiens BAC clone RP11-240E2 from 9, complet... 40 8.6
37gb|AC133569.4| Homo sapiens chromosome 16 clone RP11-96K14, comp... 40 8.6
38emb|BX828408.1|CNS0A3RL Arabidopsis thaliana Full-length cDNA Co... 40 8.6
39emb|BX828137.1|CNS0A3TK Arabidopsis thaliana Full-length cDNA Co... 40 8.6
40gb|AC137800.3| Homo sapiens chromosome 16 clone RP11-652G5, comp... 40 8.6
41gb|AC141293.2| Homo sapiens chromosome 16 clone RP11-51M16, comp... 40 8.6
42gb|BT005320.1| Arabidopsis thaliana At4g14905 mRNA, complete cds 40 8.6
43gb|AC139109.1| Homo sapiens chromosome 5 clone RP11-887F16, comp... 40 8.6
44gb|AC136612.2| Homo sapiens chromosome 16 clone RP11-319D11, com... 40 8.6
45dbj|BA000016.3| Clostridium perfringens str. 13 DNA, complete ge... 40 8.6
46dbj|AK117987.1| Arabidopsis thaliana mRNA for unknown protein, c... 40 8.6
47gb|AC027354.3| Homo sapiens chromosome 16 clone RP11-179H7, comp... 40 8.6
48emb|AL161540.2|ATCHRIV40 Arabidopsis thaliana DNA chromosome 4, ... 40 8.6
49ref|NM_020559.1| Mus musculus aminolevulinic acid synthase 1 (Al... 40 8.6
50gb|AC122275.4| Mus musculus BAC clone RP23-229G17 from 15, compl... 40 8.6
51gb|AC136625.2| Homo sapiens chromosome 16 clone RP11-554I17, com... 40 8.6
52gb|AC136437.2| Homo sapiens chromosome 16 clone RP11-347D23, com... 40 8.6
53gb|AC157945.2| Mus musculus BAC clone RP23-289C11 from chromosom... 40 8.6
54emb|AL663117.14| Mouse DNA sequence from clone RP23-217A20 on ch... 40 8.6
55gb|M63245.1|MUSALASH Mus musculus amino levulinate synthase (ALA... 40 8.6
56emb|AL358432.11| Human DNA sequence from clone RP11-18E18 on chr... 40 8.6
57gb|M84607.1|MUSPDGFAR Mus musculus PDGF-alpha-receptor (PDGF-alp... 40 8.6
58gb|M57683.1|MUSMPDGAA M.musculus PDGF alpha receptor (mPDGF-alph... 40 8.6 
>dbj|AB257219.1| Phragmites australis PhaHAK4 mRNA for potassium transporter, complete
            cds, strain: Enchi
          Length = 2786

 Score =  287 bits (145), Expect = 2e-74
 Identities = 286/333 (85%)
 Strand = Plus / Minus

                                                                        
Query: 192  cgatcagaccatgtacgtcatccctacacgcatgatgttcgagtgaggcatcttcaaggt 251
            ||||||||||||||| ||||| || |||||||||||||| |||||||| | |||||  ||
Sbjct: 2588 cgatcagaccatgtatgtcataccgacacgcatgatgtttgagtgaggaaccttcagtgt 2529

                                                                        
Query: 252  tgcggtgccagccctgcagttcctcctcaggaaagcgtagaaatagttgatgatgaactt 311
            ||| |||||||||||||| |||||||| ||||| || ||||| ||||||||||| |||||
Sbjct: 2528 tgcagtgccagccctgcaattcctcctgaggaatgcatagaagtagttgatgataaactt 2469

                                                                        
Query: 312  ctttgtgaagaatgattgcttcctcgccctcacatcgccatgtgccaagagatatgtgaa 371
            |||  ||||||  |||| |||||||||||||||||||||||| |||||||||||||||||
Sbjct: 2468 cttcatgaagagcgattccttcctcgccctcacatcgccatgggccaagagatatgtgaa 2409

                                                                        
Query: 372  cccagatgccatggcttccctcagtgccgcgagctcgtactctaagctggggtcttcttc 431
            |||||||||||||||||| ||||  || || |||||||||||||| |  |||||||||||
Sbjct: 2408 cccagatgccatggcttctctcaaagctgccagctcgtactctaaaccagggtcttcttc 2349

                                                                        
Query: 432  tgcagacatggagctagagggtagcaaaggaacgctgccttccatgcccagcatttcatt 491
            ||| ||||||||||| || || ||||| ||| | || |||||| ||   | ||||  |||
Sbjct: 2348 tgcggacatggagctggatggaagcaatggagcactaccttccgtgttgaacattctatt 2289

                                             
Query: 492  gtcatcacccggtctctgatcagaaagcagtgg 524
            ||||||| ||  |||||||||||||||||||||
Sbjct: 2288 gtcatcaaccaatctctgatcagaaagcagtgg 2256



 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 42/46 (91%)
 Strand = Plus / Minus

                                                          
Query: 98   gtacaatccctaaactacctgctggtgtagcattccatccaagatg 143
            ||||||||||||||||||| ||||||| || || ||||||||||||
Sbjct: 2664 gtacaatccctaaactaccagctggtgcagtatcccatccaagatg 2619



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                 
Query: 590  tcacgctctgccttcattgcgctcacctcaagcgcga 626
            ||||||||||||| ||||| |||| |||| |||||||
Sbjct: 2194 tcacgctctgcctccattgtgctcgcctcgagcgcga 2158
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>dbj|AB257218.1| Phragmites australis PhaHAK4 mRNA for potassium transporter, complete
            cds, strain: Nanpi
          Length = 2794

 Score =  287 bits (145), Expect = 2e-74
 Identities = 286/333 (85%)
 Strand = Plus / Minus

                                                                        
Query: 192  cgatcagaccatgtacgtcatccctacacgcatgatgttcgagtgaggcatcttcaaggt 251
            ||||||||||||||| ||||| || |||||||||||||| |||||||| | |||||  ||
Sbjct: 2588 cgatcagaccatgtatgtcataccgacacgcatgatgtttgagtgaggaaccttcagtgt 2529

                                                                        
Query: 252  tgcggtgccagccctgcagttcctcctcaggaaagcgtagaaatagttgatgatgaactt 311
            ||| |||||||||||||| |||||||| ||||| || ||||| ||||||||||| |||||
Sbjct: 2528 tgcagtgccagccctgcaattcctcctgaggaatgcatagaagtagttgatgataaactt 2469

                                                                        
Query: 312  ctttgtgaagaatgattgcttcctcgccctcacatcgccatgtgccaagagatatgtgaa 371
            |||  ||||||  |||| |||||||||||||||||||||||| |||||||||||||||||
Sbjct: 2468 cttcatgaagagcgattccttcctcgccctcacatcgccatgggccaagagatatgtgaa 2409

                                                                        
Query: 372  cccagatgccatggcttccctcagtgccgcgagctcgtactctaagctggggtcttcttc 431
            |||||||||||||||||| ||||  || || |||||||||||||| |  |||||||||||
Sbjct: 2408 cccagatgccatggcttctctcaaagctgccagctcgtactctaaaccagggtcttcttc 2349

                                                                        
Query: 432  tgcagacatggagctagagggtagcaaaggaacgctgccttccatgcccagcatttcatt 491
            ||| ||||||||||| || || ||||| ||| | || |||||| ||   | ||||  |||
Sbjct: 2348 tgcggacatggagctggatggaagcaatggagcactaccttccgtgttgaacattctatt 2289

                                             
Query: 492  gtcatcacccggtctctgatcagaaagcagtgg 524
            ||||||| ||  |||||||||||||||||||||
Sbjct: 2288 gtcatcaaccaatctctgatcagaaagcagtgg 2256



 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 42/46 (91%)
 Strand = Plus / Minus

                                                          
Query: 98   gtacaatccctaaactacctgctggtgtagcattccatccaagatg 143
            ||||||||||||||||||| ||||||| || || ||||||||||||
Sbjct: 2664 gtacaatccctaaactaccagctggtgcagtatcccatccaagatg 2619



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                 
Query: 590  tcacgctctgccttcattgcgctcacctcaagcgcga 626
            ||||||||||||| ||||| |||| |||| |||||||
Sbjct: 2194 tcacgctctgcctccattgtgctcgcctcgagcgcga 2158
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>ref|XM_450750.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3085

 Score =  260 bits (131), Expect = 5e-66
 Identities = 218/247 (88%)
 Strand = Plus / Minus

                                                                        
Query: 187  agccccgatcagaccatgtacgtcatccctacacgcatgatgttcgagtgaggcatcttc 246
            |||||| |||| |||||||| |||||||| |||||||| |||||||||||||| | ||||
Sbjct: 2749 agccccaatcacaccatgtatgtcatcccgacacgcataatgttcgagtgagggaccttc 2690

                                                                        
Query: 247  aaggttgcggtgccagccctgcagttcctcctcaggaaagcgtagaaatagttgatgatg 306
            ||||||||||| ||||||||||| |||||||| ||||| |||||||| || |||||||||
Sbjct: 2689 aaggttgcggttccagccctgcaattcctcctgaggaacgcgtagaagtaattgatgatg 2630

                                                                        
Query: 307  aacttctttgtgaagaatgattgcttcctcgccctcacatcgccatgtgccaagagatat 366
            |||||||| |||||||| |||| ||||||||||||||| || || ||||||||||| |||
Sbjct: 2629 aacttcttcgtgaagaacgattccttcctcgccctcacgtcaccgtgtgccaagaggtat 2570

                                                                        
Query: 367  gtgaacccagatgccatggcttccctcagtgccgcgagctcgtactctaagctggggtct 426
            ||||| ||||| || |||||||| ||||||| | | ||||| ||||| ||||||||||||
Sbjct: 2569 gtgaatccagaagctatggcttctctcagtgactccagctcatactccaagctggggtct 2510

                   
Query: 427  tcttctg 433
            |||||||
Sbjct: 2509 tcttctg 2503



 Score = 46.1 bits (23), Expect = 0.14
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                           
Query: 494  catcacccggtctctgatcagaaagcagtgg 524
            |||||||| | ||||||||||||||||||||
Sbjct: 2445 catcacccagcctctgatcagaaagcagtgg 2415
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score =  260 bits (131), Expect = 5e-66
 Identities = 218/247 (88%)
 Strand = Plus / Plus

                                                                            
Query: 187      agccccgatcagaccatgtacgtcatccctacacgcatgatgttcgagtgaggcatcttc 246
                |||||| |||| |||||||| |||||||| |||||||| |||||||||||||| | ||||
Sbjct: 12609409 agccccaatcacaccatgtatgtcatcccgacacgcataatgttcgagtgagggaccttc 12609468

                                                                            
Query: 247      aaggttgcggtgccagccctgcagttcctcctcaggaaagcgtagaaatagttgatgatg 306
                ||||||||||| ||||||||||| |||||||| ||||| |||||||| || |||||||||
Sbjct: 12609469 aaggttgcggttccagccctgcaattcctcctgaggaacgcgtagaagtaattgatgatg 12609528

                                                                            
Query: 307      aacttctttgtgaagaatgattgcttcctcgccctcacatcgccatgtgccaagagatat 366
                |||||||| |||||||| |||| ||||||||||||||| || || ||||||||||| |||
Sbjct: 12609529 aacttcttcgtgaagaacgattccttcctcgccctcacgtcaccgtgtgccaagaggtat 12609588

                                                                            
Query: 367      gtgaacccagatgccatggcttccctcagtgccgcgagctcgtactctaagctggggtct 426
                ||||| ||||| || |||||||| ||||||| | | ||||| ||||| ||||||||||||
Sbjct: 12609589 gtgaatccagaagctatggcttctctcagtgactccagctcatactccaagctggggtct 12609648

                       
Query: 427      tcttctg 433
                |||||||
Sbjct: 12609649 tcttctg 12609655



 Score = 46.1 bits (23), Expect = 0.14
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                               
Query: 494      catcacccggtctctgatcagaaagcagtgg 524
                |||||||| | ||||||||||||||||||||
Sbjct: 12609713 catcacccagcctctgatcagaaagcagtgg 12609743
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>dbj|AP005838.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OSJNBa0041C07
          Length = 179047

 Score =  260 bits (131), Expect = 5e-66
 Identities = 218/247 (88%)
 Strand = Plus / Plus

                                                                         
Query: 187   agccccgatcagaccatgtacgtcatccctacacgcatgatgttcgagtgaggcatcttc 246
             |||||| |||| |||||||| |||||||| |||||||| |||||||||||||| | ||||
Sbjct: 75347 agccccaatcacaccatgtatgtcatcccgacacgcataatgttcgagtgagggaccttc 75406

                                                                         
Query: 247   aaggttgcggtgccagccctgcagttcctcctcaggaaagcgtagaaatagttgatgatg 306
             ||||||||||| ||||||||||| |||||||| ||||| |||||||| || |||||||||
Sbjct: 75407 aaggttgcggttccagccctgcaattcctcctgaggaacgcgtagaagtaattgatgatg 75466

                                                                         
Query: 307   aacttctttgtgaagaatgattgcttcctcgccctcacatcgccatgtgccaagagatat 366
             |||||||| |||||||| |||| ||||||||||||||| || || ||||||||||| |||
Sbjct: 75467 aacttcttcgtgaagaacgattccttcctcgccctcacgtcaccgtgtgccaagaggtat 75526

                                                                         
Query: 367   gtgaacccagatgccatggcttccctcagtgccgcgagctcgtactctaagctggggtct 426
             ||||| ||||| || |||||||| ||||||| | | ||||| ||||| ||||||||||||
Sbjct: 75527 gtgaatccagaagctatggcttctctcagtgactccagctcatactccaagctggggtct 75586

                    
Query: 427   tcttctg 433
             |||||||
Sbjct: 75587 tcttctg 75593



 Score = 46.1 bits (23), Expect = 0.14
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                            
Query: 494   catcacccggtctctgatcagaaagcagtgg 524
             |||||||| | ||||||||||||||||||||
Sbjct: 75651 catcacccagcctctgatcagaaagcagtgg 75681
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>dbj|AP005637.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
              clone:P0711A01
          Length = 162400

 Score =  260 bits (131), Expect = 5e-66
 Identities = 218/247 (88%)
 Strand = Plus / Plus

                                                                          
Query: 187    agccccgatcagaccatgtacgtcatccctacacgcatgatgttcgagtgaggcatcttc 246
              |||||| |||| |||||||| |||||||| |||||||| |||||||||||||| | ||||
Sbjct: 124736 agccccaatcacaccatgtatgtcatcccgacacgcataatgttcgagtgagggaccttc 124795

                                                                          
Query: 247    aaggttgcggtgccagccctgcagttcctcctcaggaaagcgtagaaatagttgatgatg 306
              ||||||||||| ||||||||||| |||||||| ||||| |||||||| || |||||||||
Sbjct: 124796 aaggttgcggttccagccctgcaattcctcctgaggaacgcgtagaagtaattgatgatg 124855

                                                                          
Query: 307    aacttctttgtgaagaatgattgcttcctcgccctcacatcgccatgtgccaagagatat 366
              |||||||| |||||||| |||| ||||||||||||||| || || ||||||||||| |||
Sbjct: 124856 aacttcttcgtgaagaacgattccttcctcgccctcacgtcaccgtgtgccaagaggtat 124915

                                                                          
Query: 367    gtgaacccagatgccatggcttccctcagtgccgcgagctcgtactctaagctggggtct 426
              ||||| ||||| || |||||||| ||||||| | | ||||| ||||| ||||||||||||
Sbjct: 124916 gtgaatccagaagctatggcttctctcagtgactccagctcatactccaagctggggtct 124975

                     
Query: 427    tcttctg 433
              |||||||
Sbjct: 124976 tcttctg 124982



 Score = 46.1 bits (23), Expect = 0.14
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                             
Query: 494    catcacccggtctctgatcagaaagcagtgg 524
              |||||||| | ||||||||||||||||||||
Sbjct: 125040 catcacccagcctctgatcagaaagcagtgg 125070
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>dbj|AK099766.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013095A12, full
            insert sequence
          Length = 4054

 Score =  260 bits (131), Expect = 5e-66
 Identities = 218/247 (88%)
 Strand = Plus / Minus

                                                                        
Query: 187  agccccgatcagaccatgtacgtcatccctacacgcatgatgttcgagtgaggcatcttc 246
            |||||| |||| |||||||| |||||||| |||||||| |||||||||||||| | ||||
Sbjct: 3748 agccccaatcacaccatgtatgtcatcccgacacgcataatgttcgagtgagggaccttc 3689

                                                                        
Query: 247  aaggttgcggtgccagccctgcagttcctcctcaggaaagcgtagaaatagttgatgatg 306
            ||||||||||| ||||||||||| |||||||| ||||| |||||||| || |||||||||
Sbjct: 3688 aaggttgcggttccagccctgcaattcctcctgaggaacgcgtagaagtaattgatgatg 3629

                                                                        
Query: 307  aacttctttgtgaagaatgattgcttcctcgccctcacatcgccatgtgccaagagatat 366
            |||||||| |||||||| |||| ||||||||||||||| || || ||||||||||| |||
Sbjct: 3628 aacttcttcgtgaagaacgattccttcctcgccctcacgtcaccgtgtgccaagaggtat 3569

                                                                        
Query: 367  gtgaacccagatgccatggcttccctcagtgccgcgagctcgtactctaagctggggtct 426
            ||||| ||||| || |||||||| ||||||| | | ||||| ||||| ||||||||||||
Sbjct: 3568 gtgaatccagaagctatggcttctctcagtgactccagctcatactccaagctggggtct 3509

                   
Query: 427  tcttctg 433
            |||||||
Sbjct: 3508 tcttctg 3502



 Score = 46.1 bits (23), Expect = 0.14
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                           
Query: 494  catcacccggtctctgatcagaaagcagtgg 524
            |||||||| | ||||||||||||||||||||
Sbjct: 3444 catcacccagcctctgatcagaaagcagtgg 3414
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>dbj|AK070831.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023063B21, full
            insert sequence
          Length = 3081

 Score =  260 bits (131), Expect = 5e-66
 Identities = 218/247 (88%)
 Strand = Plus / Minus

                                                                        
Query: 187  agccccgatcagaccatgtacgtcatccctacacgcatgatgttcgagtgaggcatcttc 246
            |||||| |||| |||||||| |||||||| |||||||| |||||||||||||| | ||||
Sbjct: 2745 agccccaatcacaccatgtatgtcatcccgacacgcataatgttcgagtgagggaccttc 2686

                                                                        
Query: 247  aaggttgcggtgccagccctgcagttcctcctcaggaaagcgtagaaatagttgatgatg 306
            ||||||||||| ||||||||||| |||||||| ||||| |||||||| || |||||||||
Sbjct: 2685 aaggttgcggttccagccctgcaattcctcctgaggaacgcgtagaagtaattgatgatg 2626

                                                                        
Query: 307  aacttctttgtgaagaatgattgcttcctcgccctcacatcgccatgtgccaagagatat 366
            |||||||| |||||||| |||| ||||||||||||||| || || ||||||||||| |||
Sbjct: 2625 aacttcttcgtgaagaacgattccttcctcgccctcacgtcaccgtgtgccaagaggtat 2566

                                                                        
Query: 367  gtgaacccagatgccatggcttccctcagtgccgcgagctcgtactctaagctggggtct 426
            ||||| ||||| || |||||||| ||||||| | | ||||| ||||| ||||||||||||
Sbjct: 2565 gtgaatccagaagctatggcttctctcagtgactccagctcatactccaagctggggtct 2506

                   
Query: 427  tcttctg 433
            |||||||
Sbjct: 2505 tcttctg 2499



 Score = 46.1 bits (23), Expect = 0.14
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                           
Query: 494  catcacccggtctctgatcagaaagcagtgg 524
            |||||||| | ||||||||||||||||||||
Sbjct: 2441 catcacccagcctctgatcagaaagcagtgg 2411
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>gb|AY106754.1| Zea mays PCO067360 mRNA sequence
          Length = 1181

 Score =  244 bits (123), Expect = 3e-61
 Identities = 228/263 (86%)
 Strand = Plus / Minus

                                                                       
Query: 195 tcagaccatgtacgtcatccctacacgcatgatgttcgagtgaggcatcttcaaggttgc 254
           |||||||||||||||||| || ||||||||||||||||| || || | ||||| ||||||
Sbjct: 884 tcagaccatgtacgtcataccaacacgcatgatgttcgaatgggggaccttcagggttgc 825

                                                                       
Query: 255 ggtgccagccctgcagttcctcctcaggaaagcgtagaaatagttgatgatgaacttctt 314
            ||||| ||||||||||||||||| ||||| || |||||||||||||||| |||||||||
Sbjct: 824 agtgcccgccctgcagttcctcctgaggaacgcatagaaatagttgatgacgaacttctt 765

                                                                       
Query: 315 tgtgaagaatgattgcttcctcgccctcacatcgccatgtgccaagagatatgtgaaccc 374
            ||||||| ||||| |||||||||||||||||| || ||||| | |||||| || |||||
Sbjct: 764 cgtgaagactgattccttcctcgccctcacatctccgtgtgctaggagatacgtaaaccc 705

                                                                       
Query: 375 agatgccatggcttccctcagtgccgcgagctcgtactctaagctggggtcttcttctgc 434
           ||| ||||||||||| ||||| || |  ||||||||||||||||  || |||||||||  
Sbjct: 704 agaggccatggcttctctcagagcagacagctcgtactctaagccaggatcttcttctaa 645

                                  
Query: 435 agacatggagctagagggtagca 457
           |||||||||||| ||||| ||||
Sbjct: 644 agacatggagctggaggggagca 622



 Score = 44.1 bits (22), Expect = 0.55
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                 
Query: 587 tcatcacgctctgccttcattgcgctcacctcaagcgc 624
           |||||||||||||||| ||||| |||| |||| |||||
Sbjct: 496 tcatcacgctctgcctccattgtgctcgcctccagcgc 459
to top
>gb|AY111302.1| Zea mays CL24961_1 mRNA sequence
          Length = 637

 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 38/39 (97%)
 Strand = Plus / Plus

                                                  
Query: 264 cctgcagttcctcctcaggaaagcgtagaaatagttgat 302
           |||||||||||||||||||||||| ||||||||||||||
Sbjct: 292 cctgcagttcctcctcaggaaagcatagaaatagttgat 330
to top
>dbj|AB257217.1| Phragmites australis PhaHAK4 mRNA for potassium transporter, complete
            cds, strain: Utsunomiya
          Length = 2484

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 43/47 (91%)
 Strand = Plus / Minus

                                                           
Query: 193  gatcagaccatgtacgtcatccctacacgcatgatgttcgagtgagg 239
            |||||||||||||| ||||| || |||||||||||||| ||||||||
Sbjct: 2213 gatcagaccatgtatgtcataccgacacgcatgatgtttgagtgagg 2167



 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 42/46 (91%)
 Strand = Plus / Minus

                                                          
Query: 98   gtacaatccctaaactacctgctggtgtagcattccatccaagatg 143
            ||||||||||||||||||| |||||||||| || ||| ||||||||
Sbjct: 2290 gtacaatccctaaactaccagctggtgtagtatcccacccaagatg 2245
to top
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 37/39 (94%)
 Strand = Plus / Plus

                                                       
Query: 264      cctgcagttcctcctcaggaaagcgtagaaatagttgat 302
                ||||||||||||||||| ||| |||||||||||||||||
Sbjct: 19325595 cctgcagttcctcctcaagaaggcgtagaaatagttgat 19325633
to top
>dbj|AP005185.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0409B11
          Length = 168354

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 37/39 (94%)
 Strand = Plus / Plus

                                                    
Query: 264   cctgcagttcctcctcaggaaagcgtagaaatagttgat 302
             ||||||||||||||||| ||| |||||||||||||||||
Sbjct: 15133 cctgcagttcctcctcaagaaggcgtagaaatagttgat 15171
to top
>dbj|AK106582.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-111-E03, full
            insert sequence
          Length = 1549

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 37/39 (94%)
 Strand = Plus / Minus

                                                   
Query: 264  cctgcagttcctcctcaggaaagcgtagaaatagttgat 302
            ||||||||||||||||| ||| |||||||||||||||||
Sbjct: 1255 cctgcagttcctcctcaagaaggcgtagaaatagttgat 1217
to top
>dbj|AP003815.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:OJ1163_G04
          Length = 106253

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 37/39 (94%)
 Strand = Plus / Plus

                                                     
Query: 264    cctgcagttcctcctcaggaaagcgtagaaatagttgat 302
              ||||||||||||||||| ||| |||||||||||||||||
Sbjct: 101821 cctgcagttcctcctcaagaaggcgtagaaatagttgat 101859
to top
>gb|CP000155.1| Hahella chejuensis KCTC 2396, complete genome
          Length = 7215267

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 542     gcaggagcagcaggcgattgaa 563
               ||||||||||||||||||||||
Sbjct: 4188659 gcaggagcagcaggcgattgaa 4188680
to top
>gb|AY485619.1| Cryphonectria parasitica DNA-dependent RNA polymerase II second
           largest subunit gene, partial cds
          Length = 2889

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 176 aggcgcagccgagccccgatc 196
           |||||||||||||||||||||
Sbjct: 63  aggcgcagccgagccccgatc 83
to top
>ref|NM_202821.1| Arabidopsis thaliana unknown protein AT4G14905 transcript variant
           AT4G14905.2 mRNA, complete cds
          Length = 1572

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 304 atgaacttctttgtgaagaatgat 327
           |||||||||||||||| |||||||
Sbjct: 670 atgaacttctttgtgatgaatgat 693
to top
>ref|NM_179056.1| Arabidopsis thaliana unknown protein AT4G14905 transcript variant
           AT4G14905.1 mRNA, complete cds
          Length = 1382

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 304 atgaacttctttgtgaagaatgat 327
           |||||||||||||||| |||||||
Sbjct: 677 atgaacttctttgtgatgaatgat 700
to top
>gb|AC161352.7| Mus musculus chromosome 3, clone RP23-129N8, complete sequence
          Length = 192165

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 530   tgcagatcctcagcaggagcagca 553
             ||||||||||| ||||||||||||
Sbjct: 70889 tgcagatcctctgcaggagcagca 70866
to top
>gb|AC133457.6| Mus musculus chromosome 3, clone RP24-493E2, complete sequence
          Length = 169824

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 530    tgcagatcctcagcaggagcagca 553
              ||||||||||| ||||||||||||
Sbjct: 169441 tgcagatcctctgcaggagcagca 169418
to top
>ref|NM_011058.1| Mus musculus platelet derived growth factor receptor, alpha
           polypeptide (Pdgfra), mRNA
          Length = 6576

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 419 tggggtcttcttctgcagacatgg 442
           |||||||||||||| |||||||||
Sbjct: 391 tggggtcttcttcttcagacatgg 368
to top
>gb|AC121873.3| Mus musculus BAC clone RP24-123L3 from chromosome 19, complete sequence
          Length = 209035

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 263    ccctgcagttcctcctcagg 282
              ||||||||||||||||||||
Sbjct: 141121 ccctgcagttcctcctcagg 141140
to top
>gb|AC102352.9| Mus musculus chromosome 14, clone RP23-30H7, complete sequence
          Length = 248441

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 378    tgccatggcttccctcagtg 397
              ||||||||||||||||||||
Sbjct: 190929 tgccatggcttccctcagtg 190948
to top
>gb|BC004099.1| Mus musculus aminolevulinic acid synthase 1, mRNA (cDNA clone
           IMAGE:3594325)
          Length = 941

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 300 gatgatgaacttctttgtgaagaa 323
           ||||||||||||||||||| ||||
Sbjct: 650 gatgatgaacttctttgtggagaa 673
to top
>emb|AJ276865.1|STU276865 Solanum tuberosum partial ure gene for urease (allelic form 1),
           exons 5-18
          Length = 11066

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 266 tgcagttcctcctcaggaaa 285
           ||||||||||||||||||||
Sbjct: 363 tgcagttcctcctcaggaaa 382
to top
>emb|AJ276864.1|STU276864 Solanum tuberosum partial adk gene for putative adenylate kinase and
            ure gene for urease (allelic form 2)
          Length = 18962

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 266  tgcagttcctcctcaggaaa 285
            ||||||||||||||||||||
Sbjct: 6444 tgcagttcctcctcaggaaa 6463
to top
>gb|AC002307.1|HUAC002307 Homo sapiens Chromosome 16 BAC clone CIT987-SK37914  ~complete genomic
              sequence, complete sequence
          Length = 161580

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 302    tgatgaacttctttgtgaag 321
              ||||||||||||||||||||
Sbjct: 124345 tgatgaacttctttgtgaag 124364
to top
>ref|XM_807160.1| Trypanosoma cruzi strain CL Brener hypothetical protein
            (Tc00.1047053506637.50) partial mRNA
          Length = 2391

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 303  gatgaacttctttgtgaaga 322
            ||||||||||||||||||||
Sbjct: 1559 gatgaacttctttgtgaaga 1540
to top
>gb|AC114938.3| Homo sapiens chromosome 16 clone CTD-2244D9, complete sequence
          Length = 166928

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 302  tgatgaacttctttgtgaag 321
            ||||||||||||||||||||
Sbjct: 6979 tgatgaacttctttgtgaag 6998
to top
>gb|AY152836.1| Felis catus clone BAC 160a17 major histocompatiblity complex classical
              class II region, partial sequence
          Length = 130898

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 126    agcattccatccaagatgag 145
              ||||||||||||||||||||
Sbjct: 121714 agcattccatccaagatgag 121733
to top
>emb|Z97337.2|ATFCA2 Arabidopsis thaliana DNA chromosome 4, ESSA I FCA contig fragment No. 2
          Length = 202860

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 304   atgaacttctttgtgaagaatgat 327
             |||||||||||||||| |||||||
Sbjct: 92395 atgaacttctttgtgatgaatgat 92372
to top
>gb|AC160997.5| Mus musculus BAC clone RP23-68E4 from chromosome 9, complete sequence
          Length = 179142

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 378   tgccatggcttccctcagtg 397
             ||||||||||||||||||||
Sbjct: 40819 tgccatggcttccctcagtg 40800
to top
>gb|AC141070.2| Homo sapiens chromosome 16 clone RP11-171B13, complete sequence
          Length = 161261

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 302   tgatgaacttctttgtgaag 321
             ||||||||||||||||||||
Sbjct: 88148 tgatgaacttctttgtgaag 88167
to top
>gb|BC022110.1| Mus musculus aminolevulinic acid synthase 1, mRNA (cDNA clone
            MGC:36195 IMAGE:5133249), complete cds
          Length = 2142

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 300  gatgatgaacttctttgtgaagaa 323
            ||||||||||||||||||| ||||
Sbjct: 1839 gatgatgaacttctttgtggagaa 1862
to top
>gb|AC068050.6| Homo sapiens BAC clone RP11-240E2 from 9, complete sequence
          Length = 152747

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 372   cccagatgccatggcttccctcag 395
             ||||||| ||||||||||||||||
Sbjct: 96541 cccagatcccatggcttccctcag 96518
to top
>gb|AC133569.4| Homo sapiens chromosome 16 clone RP11-96K14, complete sequence
          Length = 107932

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 302  tgatgaacttctttgtgaag 321
            ||||||||||||||||||||
Sbjct: 3934 tgatgaacttctttgtgaag 3953
to top
>emb|BX828408.1|CNS0A3RL Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH86ZC06 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1453

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 304 atgaacttctttgtgaagaatgat 327
           |||||||||||||||| |||||||
Sbjct: 619 atgaacttctttgtgatgaatgat 642
to top
>emb|BX828137.1|CNS0A3TK Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH56ZE09 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1545

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 304 atgaacttctttgtgaagaatgat 327
           |||||||||||||||| |||||||
Sbjct: 643 atgaacttctttgtgatgaatgat 666
to top
>gb|AC137800.3| Homo sapiens chromosome 16 clone RP11-652G5, complete sequence
          Length = 196550

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 302   tgatgaacttctttgtgaag 321
             ||||||||||||||||||||
Sbjct: 81422 tgatgaacttctttgtgaag 81403
to top
>gb|AC141293.2| Homo sapiens chromosome 16 clone RP11-51M16, complete sequence
          Length = 185339

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 302    tgatgaacttctttgtgaag 321
              ||||||||||||||||||||
Sbjct: 181406 tgatgaacttctttgtgaag 181387
to top
>gb|BT005320.1| Arabidopsis thaliana At4g14905 mRNA, complete cds
          Length = 1119

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 304 atgaacttctttgtgaagaatgat 327
           |||||||||||||||| |||||||
Sbjct: 670 atgaacttctttgtgatgaatgat 693
to top
>gb|AC139109.1| Homo sapiens chromosome 5 clone RP11-887F16, complete sequence
          Length = 167832

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 302   tgatgaacttctttgtgaag 321
             ||||||||||||||||||||
Sbjct: 64714 tgatgaacttctttgtgaag 64733
to top
>gb|AC136612.2| Homo sapiens chromosome 16 clone RP11-319D11, complete sequence
          Length = 221622

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 302    tgatgaacttctttgtgaag 321
              ||||||||||||||||||||
Sbjct: 151366 tgatgaacttctttgtgaag 151347
to top
>dbj|BA000016.3| Clostridium perfringens str. 13 DNA, complete genome
          Length = 3031430

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 307     aacttctttgtgaagaatga 326
               ||||||||||||||||||||
Sbjct: 2674389 aacttctttgtgaagaatga 2674370
to top
>dbj|AK117987.1| Arabidopsis thaliana mRNA for unknown protein, complete cds, clone:
           RAFL19-19-C01
          Length = 1381

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 304 atgaacttctttgtgaagaatgat 327
           |||||||||||||||| |||||||
Sbjct: 677 atgaacttctttgtgatgaatgat 700
to top
>gb|AC027354.3| Homo sapiens chromosome 16 clone RP11-179H7, complete sequence
          Length = 182046

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 302   tgatgaacttctttgtgaag 321
             ||||||||||||||||||||
Sbjct: 64714 tgatgaacttctttgtgaag 64733
to top
>emb|AL161540.2|ATCHRIV40 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 40
          Length = 197405

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 304   atgaacttctttgtgaagaatgat 327
             |||||||||||||||| |||||||
Sbjct: 37849 atgaacttctttgtgatgaatgat 37826
to top
>ref|NM_020559.1| Mus musculus aminolevulinic acid synthase 1 (Alas1), mRNA
          Length = 2142

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 300  gatgatgaacttctttgtgaagaa 323
            ||||||||||||||||||| ||||
Sbjct: 1839 gatgatgaacttctttgtggagaa 1862
to top
>gb|AC122275.4| Mus musculus BAC clone RP23-229G17 from 15, complete sequence
          Length = 214490

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 506    tctgatcagaaagcagtggg 525
              ||||||||||||||||||||
Sbjct: 146644 tctgatcagaaagcagtggg 146625
to top
>gb|AC136625.2| Homo sapiens chromosome 16 clone RP11-554I17, complete sequence
          Length = 184294

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 302   tgatgaacttctttgtgaag 321
             ||||||||||||||||||||
Sbjct: 37560 tgatgaacttctttgtgaag 37541
to top
>gb|AC136437.2| Homo sapiens chromosome 16 clone RP11-347D23, complete sequence
          Length = 161397

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 302    tgatgaacttctttgtgaag 321
              ||||||||||||||||||||
Sbjct: 128678 tgatgaacttctttgtgaag 128697
to top
>gb|AC157945.2| Mus musculus BAC clone RP23-289C11 from chromosome 9, complete sequence
          Length = 216396

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 378   tgccatggcttccctcagtg 397
             ||||||||||||||||||||
Sbjct: 35340 tgccatggcttccctcagtg 35359
to top
>emb|AL663117.14| Mouse DNA sequence from clone RP23-217A20 on chromosome 11, complete
             sequence
          Length = 148291

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 378   tgccatggcttccctcagtg 397
             ||||||||||||||||||||
Sbjct: 88307 tgccatggcttccctcagtg 88288
to top
>gb|M63245.1|MUSALASH Mus musculus amino levulinate synthase (ALAS-H) mRNA, 3' end
          Length = 1448

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 300  gatgatgaacttctttgtgaagaa 323
            ||||||||||||||||||| ||||
Sbjct: 1190 gatgatgaacttctttgtggagaa 1213
to top
>emb|AL358432.11| Human DNA sequence from clone RP11-18E18 on chromosome 9, complete
             sequence
          Length = 92398

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 372   cccagatgccatggcttccctcag 395
             ||||||| ||||||||||||||||
Sbjct: 77926 cccagatcccatggcttccctcag 77903
to top
>gb|M84607.1|MUSPDGFAR Mus musculus PDGF-alpha-receptor (PDGF-alpha-R) mRNA, complete cds
          Length = 6576

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 419 tggggtcttcttctgcagacatgg 442
           |||||||||||||| |||||||||
Sbjct: 391 tggggtcttcttcttcagacatgg 368
to top
>gb|M57683.1|MUSMPDGAA M.musculus PDGF alpha receptor (mPDGF-alpha-R) mRNA, complete cds
          Length = 3564

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 419 tggggtcttcttctgcagacatgg 442
           |||||||||||||| |||||||||
Sbjct: 280 tggggtcttcttcttcagacatgg 257


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,171,165
Number of Sequences: 3902068
Number of extensions: 5171165
Number of successful extensions: 97478
Number of sequences better than 10.0: 58
Number of HSP's better than 10.0 without gapping: 58
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 97259
Number of HSP's gapped (non-prelim): 217
length of query: 629
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 606
effective length of database: 17,143,297,704
effective search space: 10388838408624
effective search space used: 10388838408624
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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