No.
Definition
Score (bits)
E Value
1 ref|XM_506746.1| PREDICTED Oryza sativa (japonica cultivar-group...
272
1e-69
2 ref|XM_464458.1| Oryza sativa (japonica cultivar-group), mRNA
272
1e-69
3 dbj|AK061911.1| Oryza sativa (japonica cultivar-group) cDNA clon...
272
1e-69
4 dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D...
272
1e-69
5 dbj|AP004184.3| Oryza sativa (japonica cultivar-group) genomic D...
272
1e-69
6 dbj|AK067403.1| Oryza sativa (japonica cultivar-group) cDNA clon...
272
1e-69
7 gb|BT016379.1| Zea mays clone Contig212 mRNA sequence
180
3e-42
8 gb|BT019326.1| Zea mays clone Contig1045.F mRNA sequence
178
1e-41
9 gb|AY109331.1| Zea mays CL253_2 mRNA sequence
178
1e-41
10 gb|AY105966.1| Zea mays PCO143261 mRNA sequence
178
1e-41
11 gb|AY105867.1| Zea mays PCO143262 mRNA sequence
178
1e-41
12 gb|AY787873.1| Zea mays zinc finger protein (znf1) mRNA, complet...
165
2e-37
13 gb|BT017601.1| Zea mays clone EL01N0431H03.c mRNA sequence
165
2e-37
14 gb|AY345599.2| Oryza sativa (indica cultivar-group) stress-assoc...
161
3e-36
15 dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D...
161
3e-36
16 dbj|AP003711.3| Oryza sativa (japonica cultivar-group) genomic D...
161
3e-36
17 dbj|AP003626.3| Oryza sativa (japonica cultivar-group) genomic D...
161
3e-36
18 dbj|AK104562.1| Oryza sativa (japonica cultivar-group) cDNA clon...
161
3e-36
19 dbj|AK104605.1| Oryza sativa (japonica cultivar-group) cDNA clon...
161
3e-36
20 dbj|AK104175.1| Oryza sativa (japonica cultivar-group) cDNA clon...
161
3e-36
21 dbj|AK069720.1| Oryza sativa (japonica cultivar-group) cDNA clon...
161
3e-36
22 dbj|AK062342.1| Oryza sativa (japonica cultivar-group) cDNA clon...
161
3e-36
23 dbj|AK060008.1| Oryza sativa (japonica cultivar-group) cDNA clon...
161
3e-36
24 gb|AY515607.1| Zea mays putative zinc finger protein ZmZf mRNA, ...
157
5e-35
25 gb|DQ083231.1| Oryza sativa (indica cultivar-group) clone 5B6A82...
113
7e-22
26 gb|DQ083227.1| Oryza sativa (indica cultivar-group) clone 2B5A77...
113
7e-22
27 gb|DQ083230.1| Oryza sativa (indica cultivar-group) clone 3B12G8...
62
2e-06
28 gb|AY324386.1| Homo sapiens glucose phosphate isomerase (GPI) ge...
42
2.0
29 gb|AC104797.3| Homo sapiens BAC clone RP11-327I3 from 4, complet...
42
2.0
30 gb|AC092073.2| Homo sapiens chromosome 19 clone RP11-618P17, com...
42
2.0
31 gb|AC097514.3| Homo sapiens BAC clone RP11-425J20 from 4, comple...
42
2.0
32 gb|AC011345.5| Homo sapiens chromosome 5 clone CTC-293E5, comple...
42
2.0
33 ref|NM_180890.1| Arabidopsis thaliana DNA binding AT5G59430 tran...
40
7.9
34 ref|NM_125334.3| Arabidopsis thaliana DNA binding AT5G59430 tran...
40
7.9
35 ref|NM_196306.1| Oryza sativa (japonica cultivar-group) unknown ...
40
7.9
36 gb|CP000070.1| Trypanosoma brucei chromosome 7, complete sequence
40
7.9
37 gb|AC133006.6| Oryza sativa (japonica cultivar-group) chromosome...
40
7.9
38 gb|AC091527.21| Trypanosoma brucei chromosome 7 clone RPCI93-33N...
40
7.9
39 gb|AC091677.12| Mus musculus chromosome 18, clone RP23-131E5, co...
40
7.9
40 gb|AY519544.1| Arabidopsis thaliana MYB transcription factor (At...
40
7.9
41 ref|XM_821159.1| Trypanosoma brucei TREU927 clone RPCI93-33N13 h...
40
7.9
42 ref|XM_444959.1| Candida glabrata CBS138 hypothetical protein (C...
40
7.9
43 gb|AC133002.6| Oryza sativa chromosome 11 BAC OJ1123_D06 genomic...
40
7.9
44 gb|AC010091.2| Homo sapiens BAC clone RP11-295A1 from 7, complet...
40
7.9
45 gb|AC103849.3| Homo sapiens chromosome 8, clone RP11-75H14, comp...
40
7.9
46 emb|AL450163.12| Human DNA sequence from clone RP11-384L19 on ch...
40
7.9
47 emb|AL122058.19|HSJ813D12 Human DNA sequence from clone RP4-813D...
40
7.9
48 gb|BT000117.1| Arabidopsis thaliana telomere repeat-binding prot...
40
7.9
49 emb|CR380947.1| Candida glabrata strain CBS138 chromosome A comp...
40
7.9
50 gb|AF332547.1| Pseudomonas aeruginosa flagellar hook-associated ...
40
7.9
51 emb|BX901976.22| Zebrafish DNA sequence from clone DKEY-101P20 i...
40
7.9
52 gb|AC091734.3| Genomic Sequence for Oryza sativa, Nipponbare str...
40
7.9
53 gb|AY128382.1| Arabidopsis thaliana telomere repeat-binding prot...
40
7.9
54 gb|AC107952.5| Homo sapiens chromosome 8, clone RP11-140I16, com...
40
7.9
55 gb|AC068025.12| Homo sapiens chromosome 17, clone RP11-802D6, co...
40
7.9
56 emb|BX908757.10| Zebrafish DNA sequence from clone DKEY-206L1 in...
40
7.9
57 gb|AC092388.5| Oryza sativa chromosome 10 BAC OSJNBa0011L09 geno...
40
7.9
58 dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D...
40
7.9
59 dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D...
40
7.9
60 gb|AC093307.5| Homo sapiens chromosome 5 clone RP11-810C16, comp...
40
7.9
61 emb|BX830705.1|CNS0A1NQ Arabidopsis thaliana Full-length cDNA Co...
40
7.9
62 emb|BX830199.1|CNS0A063 Arabidopsis thaliana Full-length cDNA Co...
40
7.9
63 dbj|AB025604.1| Arabidopsis thaliana genomic DNA, chromosome 5, ...
40
7.9
64 emb|Y17722.1|ATH17722 Arabidopsis thaliana trp1 gene
40
7.9
65 dbj|AK072853.1| Oryza sativa (japonica cultivar-group) cDNA clon...
40
7.9
66 emb|CR925781.6| Zebrafish DNA sequence from clone DKEY-3B23 in l...
40
7.9
67 dbj|AK061008.1| Oryza sativa (japonica cultivar-group) cDNA clon...
40
7.9
68 emb|AL953841.5| Zebrafish DNA sequence from clone DKEY-44G23 in ...
40
7.9
69 gb|AY642926.1| Hordeum vulgare BAC CC24_14, complete sequence
40
7.9
70 gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome...
40
7.9
71 gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome...
40
7.9
72 emb|AL844522.7| Zebrafish DNA sequence from clone DKEY-113M9, co...
40
7.9
>dbj|AK061911.1 | Oryza sativa (japonica cultivar-group) cDNA clone:001-042-A06, full
insert sequence
Length = 991
Score = 272 bits (137), Expect = 1e-69
Identities = 182/197 (92%)
Strand = Plus / Minus
Query: 279 atcttgtcgagcttctctgccttcaccactgggttggccttggcgatggcatccctagct 338
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 atcttgtcgagcttctcagccttcaccactgggttggccttggcgatggcatccctagcc 602
Query: 339 gcagtccggtagtcgaactggcagtcatgcttgtcggaatagcggtgcagcgaacagtac 398
||||||||||||||||||||||| |||||||||||||| |||||||||| || |||||||
Sbjct: 601 gcagtccggtagtcgaactggcattcatgcttgtcggagtagcggtgcaacgcacagtac 542
Query: 399 atgttaccgcatctgcagttgaatcccgttagcccaaccctcttcctgcaagttgagcac 458
||||||||||| | ||||||||||||||| ||||||||||||||||| || || | ||||
Sbjct: 541 atgttaccgcaccggcagttgaatcccgtcagcccaaccctcttcctacaggtagcgcac 482
Query: 459 cgattcggcccctcctt 475
|| |||||||| |||||
Sbjct: 481 cggttcggcccttcctt 465
Score = 60.0 bits (30), Expect = 9e-06
Identities = 91/110 (82%), Gaps = 1/110 (0%)
Strand = Plus / Minus
Query: 87 caacacgcaaaccattcggaatgactgagaggattgagttcttgcagctgccacgacgca 146
|||||||||||||| | | ||||||||||||| || ||||| | ||||||| || |||
Sbjct: 850 caacacgcaaaccacttgacttgactgagaggat-gaattctttcggctgccaggatgca 792
Query: 147 gtgtgcatcacgatgccgtacaatttaggaaatgtggcagccaacaagaa 196
||||||||||| | | | |||||||| ||||||| |||||| |||||||
Sbjct: 791 gtgtgcatcacaaagttgaacaatttaagaaatgtagcagccgacaagaa 742
Score = 54.0 bits (27), Expect = 5e-04
Identities = 62/70 (88%), Gaps = 4/70 (5%)
Strand = Plus / Minus
Query: 23 acagagctagctaaaatgagaagccacaatactgaccgaaaaaaccaccatgaataaag- 81
||||||||||| ||| ||||| ||||||||||||||| |||||||||| ||||||||
Sbjct: 921 acagagctagccaaa-tgagacaccacaatactgaccg--aaaaccaccaagaataaaga 865
Query: 82 ttacacaaca 91
||||||||||
Sbjct: 864 ttacacaaca 855
>gb|AY345599.2 | Oryza sativa (indica cultivar-group) stress-associated protein-3
(SAP-3) mRNA, complete cds
Length = 1132
Score = 161 bits (81), Expect = 3e-36
Identities = 183/217 (84%)
Strand = Plus / Minus
Query: 274 cctaaatcttgtcgagcttctctgccttcaccactgggttggccttggcgatggcatccc 333
||||||| ||||| || ||||| ||||||||||| || || |||||||| || |||||||
Sbjct: 577 cctaaattttgtcaagtttctccgccttcaccaccggattagccttggcaatagcatccc 518
Query: 334 tagctgcagtccggtagtcgaactggcagtcatgcttgtcggaatagcggtgcagcgaac 393
|||| || ||||| ||||| ||||||||||||||||| |||||||||||||||| | |
Sbjct: 517 tagcagcggtccgatagtcaaactggcagtcatgcttatcggaatagcggtgcattgcgc 458
Query: 394 agtacatgttaccgcatctgcagttgaatcccgttagcccaaccctcttcctgcaagttg 453
|||||| ||| || |||| |||||||||||| || || ||||||||||||| ||||| |
Sbjct: 457 agtacaagttgccacatcggcagttgaatccggtaagaccaaccctcttccgacaagtgg 398
Query: 454 agcaccgattcggcccctccttcctcttggggctcac 490
|||||||||| || || ||| ||| ||||||| ||||
Sbjct: 397 agcaccgatttggtccttccctccccttggggttcac 361
Score = 44.1 bits (22), Expect = 0.51
Identities = 42/46 (91%), Gaps = 2/46 (4%)
Strand = Plus / Minus
Query: 9 acaatagtacataaacagagctagctaaaatgagaagccacaatac 54
|||||||||||| | ||||||||||| ||||| |||||||||||||
Sbjct: 853 acaatagtacatta-cagagctagct-aaatgcgaagccacaatac 810
Score = 40.1 bits (20), Expect = 7.9
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 217 cagcaaagatggatgatgaa 236
||||||||||||||||||||
Sbjct: 639 cagcaaagatggatgatgaa 620
Score = 40.1 bits (20), Expect = 7.9
Identities = 47/56 (83%)
Strand = Plus / Minus
Query: 523 cagcaggctgcacaacgagtgccttcacgtcaacttgagcaaccgccacctcagcg 578
||||||||||| |||| || | |||||| || ||||||||||| || || ||||||
Sbjct: 331 cagcaggctgcgcaacaagcgtcttcacctcgacttgagcaacagctacttcagcg 276
>dbj|AP008212.1 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
sequence
Length = 30731886
Score = 161 bits (81), Expect = 3e-36
Identities = 183/217 (84%)
Strand = Plus / Minus
Query: 274 cctaaatcttgtcgagcttctctgccttcaccactgggttggccttggcgatggcatccc 333
||||||| ||||| || ||||| ||||||||||| || || |||||||| || |||||||
Sbjct: 24109922 cctaaattttgtcaagtttctccgccttcaccaccggattagccttggcaatagcatccc 24109863
Query: 334 tagctgcagtccggtagtcgaactggcagtcatgcttgtcggaatagcggtgcagcgaac 393
|||| || ||||| ||||| ||||||||||||||||| |||||||||||||||| | |
Sbjct: 24109862 tagcagcggtccgatagtcaaactggcagtcatgcttatcggaatagcggtgcattgcgc 24109803
Query: 394 agtacatgttaccgcatctgcagttgaatcccgttagcccaaccctcttcctgcaagttg 453
|||||| ||| || |||| |||||||||||| || || ||||||||||||| ||||| |
Sbjct: 24109802 agtacaagttgccacatcggcagttgaatccggtaagaccaaccctcttccgacaagtgg 24109743
Query: 454 agcaccgattcggcccctccttcctcttggggctcac 490
|||||||||| || || ||| ||| ||||||| ||||
Sbjct: 24109742 agcaccgatttggtccttccctccccttggggttcac 24109706
Score = 44.1 bits (22), Expect = 0.51
Identities = 42/46 (91%), Gaps = 2/46 (4%)
Strand = Plus / Minus
Query: 9 acaatagtacataaacagagctagctaaaatgagaagccacaatac 54
|||||||||||| | ||||||||||| ||||| |||||||||||||
Sbjct: 24110198 acaatagtacatta-cagagctagct-aaatgcgaagccacaatac 24110155
Score = 40.1 bits (20), Expect = 7.9
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 217 cagcaaagatggatgatgaa 236
||||||||||||||||||||
Sbjct: 24109984 cagcaaagatggatgatgaa 24109965
Score = 40.1 bits (20), Expect = 7.9
Identities = 47/56 (83%)
Strand = Plus / Minus
Query: 523 cagcaggctgcacaacgagtgccttcacgtcaacttgagcaaccgccacctcagcg 578
||||||||||| |||| || | |||||| || ||||||||||| || || ||||||
Sbjct: 24109676 cagcaggctgcgcaacaagcgtcttcacctcgacttgagcaacagctacttcagcg 24109621
>dbj|AP003711.3 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
clone:P0417G12
Length = 163568
Score = 161 bits (81), Expect = 3e-36
Identities = 183/217 (84%)
Strand = Plus / Minus
Query: 274 cctaaatcttgtcgagcttctctgccttcaccactgggttggccttggcgatggcatccc 333
||||||| ||||| || ||||| ||||||||||| || || |||||||| || |||||||
Sbjct: 43380 cctaaattttgtcaagtttctccgccttcaccaccggattagccttggcaatagcatccc 43321
Query: 334 tagctgcagtccggtagtcgaactggcagtcatgcttgtcggaatagcggtgcagcgaac 393
|||| || ||||| ||||| ||||||||||||||||| |||||||||||||||| | |
Sbjct: 43320 tagcagcggtccgatagtcaaactggcagtcatgcttatcggaatagcggtgcattgcgc 43261
Query: 394 agtacatgttaccgcatctgcagttgaatcccgttagcccaaccctcttcctgcaagttg 453
|||||| ||| || |||| |||||||||||| || || ||||||||||||| ||||| |
Sbjct: 43260 agtacaagttgccacatcggcagttgaatccggtaagaccaaccctcttccgacaagtgg 43201
Query: 454 agcaccgattcggcccctccttcctcttggggctcac 490
|||||||||| || || ||| ||| ||||||| ||||
Sbjct: 43200 agcaccgatttggtccttccctccccttggggttcac 43164
Score = 44.1 bits (22), Expect = 0.51
Identities = 42/46 (91%), Gaps = 2/46 (4%)
Strand = Plus / Minus
Query: 9 acaatagtacataaacagagctagctaaaatgagaagccacaatac 54
|||||||||||| | ||||||||||| ||||| |||||||||||||
Sbjct: 43656 acaatagtacatta-cagagctagct-aaatgcgaagccacaatac 43613
Score = 40.1 bits (20), Expect = 7.9
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 217 cagcaaagatggatgatgaa 236
||||||||||||||||||||
Sbjct: 43442 cagcaaagatggatgatgaa 43423
Score = 40.1 bits (20), Expect = 7.9
Identities = 47/56 (83%)
Strand = Plus / Minus
Query: 523 cagcaggctgcacaacgagtgccttcacgtcaacttgagcaaccgccacctcagcg 578
||||||||||| |||| || | |||||| || ||||||||||| || || ||||||
Sbjct: 43134 cagcaggctgcgcaacaagcgtcttcacctcgacttgagcaacagctacttcagcg 43079
>dbj|AP003626.3 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
clone:P0429G06
Length = 158321
Score = 161 bits (81), Expect = 3e-36
Identities = 183/217 (84%)
Strand = Plus / Minus
Query: 274 cctaaatcttgtcgagcttctctgccttcaccactgggttggccttggcgatggcatccc 333
||||||| ||||| || ||||| ||||||||||| || || |||||||| || |||||||
Sbjct: 119615 cctaaattttgtcaagtttctccgccttcaccaccggattagccttggcaatagcatccc 119556
Query: 334 tagctgcagtccggtagtcgaactggcagtcatgcttgtcggaatagcggtgcagcgaac 393
|||| || ||||| ||||| ||||||||||||||||| |||||||||||||||| | |
Sbjct: 119555 tagcagcggtccgatagtcaaactggcagtcatgcttatcggaatagcggtgcattgcgc 119496
Query: 394 agtacatgttaccgcatctgcagttgaatcccgttagcccaaccctcttcctgcaagttg 453
|||||| ||| || |||| |||||||||||| || || ||||||||||||| ||||| |
Sbjct: 119495 agtacaagttgccacatcggcagttgaatccggtaagaccaaccctcttccgacaagtgg 119436
Query: 454 agcaccgattcggcccctccttcctcttggggctcac 490
|||||||||| || || ||| ||| ||||||| ||||
Sbjct: 119435 agcaccgatttggtccttccctccccttggggttcac 119399
Score = 44.1 bits (22), Expect = 0.51
Identities = 42/46 (91%), Gaps = 2/46 (4%)
Strand = Plus / Minus
Query: 9 acaatagtacataaacagagctagctaaaatgagaagccacaatac 54
|||||||||||| | ||||||||||| ||||| |||||||||||||
Sbjct: 119891 acaatagtacatta-cagagctagct-aaatgcgaagccacaatac 119848
Score = 40.1 bits (20), Expect = 7.9
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 217 cagcaaagatggatgatgaa 236
||||||||||||||||||||
Sbjct: 119677 cagcaaagatggatgatgaa 119658
Score = 40.1 bits (20), Expect = 7.9
Identities = 47/56 (83%)
Strand = Plus / Minus
Query: 523 cagcaggctgcacaacgagtgccttcacgtcaacttgagcaaccgccacctcagcg 578
||||||||||| |||| || | |||||| || ||||||||||| || || ||||||
Sbjct: 119369 cagcaggctgcgcaacaagcgtcttcacctcgacttgagcaacagctacttcagcg 119314
>dbj|AK104562.1 | Oryza sativa (japonica cultivar-group) cDNA clone:006-306-D03, full
insert sequence
Length = 999
Score = 161 bits (81), Expect = 3e-36
Identities = 183/217 (84%)
Strand = Plus / Minus
Query: 274 cctaaatcttgtcgagcttctctgccttcaccactgggttggccttggcgatggcatccc 333
||||||| ||||| || ||||| ||||||||||| || || |||||||| || |||||||
Sbjct: 666 cctaaattttgtcaagtttctccgccttcaccaccggattagccttggcaatagcatccc 607
Query: 334 tagctgcagtccggtagtcgaactggcagtcatgcttgtcggaatagcggtgcagcgaac 393
|||| || ||||| ||||| ||||||||||||||||| |||||||||||||||| | |
Sbjct: 606 tagcagcggtccgatagtcaaactggcagtcatgcttatcggaatagcggtgcattgcgc 547
Query: 394 agtacatgttaccgcatctgcagttgaatcccgttagcccaaccctcttcctgcaagttg 453
|||||| ||| || |||| |||||||||||| || || ||||||||||||| ||||| |
Sbjct: 546 agtacaagttgccacatcggcagttgaatccggtaagaccaaccctcttccgacaagtgg 487
Query: 454 agcaccgattcggcccctccttcctcttggggctcac 490
|||||||||| || || ||| ||| ||||||| ||||
Sbjct: 486 agcaccgatttggtccttccctccccttggggttcac 450
Score = 44.1 bits (22), Expect = 0.51
Identities = 42/46 (91%), Gaps = 2/46 (4%)
Strand = Plus / Minus
Query: 9 acaatagtacataaacagagctagctaaaatgagaagccacaatac 54
|||||||||||| | ||||||||||| ||||| |||||||||||||
Sbjct: 942 acaatagtacatta-cagagctagct-aaatgcgaagccacaatac 899
Score = 40.1 bits (20), Expect = 7.9
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 217 cagcaaagatggatgatgaa 236
||||||||||||||||||||
Sbjct: 728 cagcaaagatggatgatgaa 709
Score = 40.1 bits (20), Expect = 7.9
Identities = 47/56 (83%)
Strand = Plus / Minus
Query: 523 cagcaggctgcacaacgagtgccttcacgtcaacttgagcaaccgccacctcagcg 578
||||||||||| |||| || | |||||| || ||||||||||| || || ||||||
Sbjct: 420 cagcaggctgcgcaacaagcgtcttcacctcgacttgagcaacagctacttcagcg 365
>dbj|AK104605.1 | Oryza sativa (japonica cultivar-group) cDNA clone:006-309-A12, full
insert sequence
Length = 1009
Score = 161 bits (81), Expect = 3e-36
Identities = 183/217 (84%)
Strand = Plus / Minus
Query: 274 cctaaatcttgtcgagcttctctgccttcaccactgggttggccttggcgatggcatccc 333
||||||| ||||| || ||||| ||||||||||| || || |||||||| || |||||||
Sbjct: 666 cctaaattttgtcaagtttctccgccttcaccaccggattagccttggcaatagcatccc 607
Query: 334 tagctgcagtccggtagtcgaactggcagtcatgcttgtcggaatagcggtgcagcgaac 393
|||| || ||||| ||||| ||||||||||||||||| |||||||||||||||| | |
Sbjct: 606 tagcagcggtccgatagtcaaactggcagtcatgcttatcggaatagcggtgcattgcgc 547
Query: 394 agtacatgttaccgcatctgcagttgaatcccgttagcccaaccctcttcctgcaagttg 453
|||||| ||| || |||| |||||||||||| || || ||||||||||||| ||||| |
Sbjct: 546 agtacaagttgccacatcggcagttgaatccggtaagaccaaccctcttccgacaagtgg 487
Query: 454 agcaccgattcggcccctccttcctcttggggctcac 490
|||||||||| || || ||| ||| ||||||| ||||
Sbjct: 486 agcaccgatttggtccttccctccccttggggttcac 450
Score = 44.1 bits (22), Expect = 0.51
Identities = 42/46 (91%), Gaps = 2/46 (4%)
Strand = Plus / Minus
Query: 9 acaatagtacataaacagagctagctaaaatgagaagccacaatac 54
|||||||||||| | ||||||||||| ||||| |||||||||||||
Sbjct: 942 acaatagtacatta-cagagctagct-aaatgcgaagccacaatac 899
Score = 40.1 bits (20), Expect = 7.9
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 217 cagcaaagatggatgatgaa 236
||||||||||||||||||||
Sbjct: 728 cagcaaagatggatgatgaa 709
Score = 40.1 bits (20), Expect = 7.9
Identities = 47/56 (83%)
Strand = Plus / Minus
Query: 523 cagcaggctgcacaacgagtgccttcacgtcaacttgagcaaccgccacctcagcg 578
||||||||||| |||| || | |||||| || ||||||||||| || || ||||||
Sbjct: 420 cagcaggctgcgcaacaagcgtcttcacctcgacttgagcaacagctacttcagcg 365
>dbj|AK104175.1 | Oryza sativa (japonica cultivar-group) cDNA clone:006-301-C11, full
insert sequence
Length = 1000
Score = 161 bits (81), Expect = 3e-36
Identities = 183/217 (84%)
Strand = Plus / Minus
Query: 274 cctaaatcttgtcgagcttctctgccttcaccactgggttggccttggcgatggcatccc 333
||||||| ||||| || ||||| ||||||||||| || || |||||||| || |||||||
Sbjct: 667 cctaaattttgtcaagtttctccgccttcaccaccggattagccttggcaatagcatccc 608
Query: 334 tagctgcagtccggtagtcgaactggcagtcatgcttgtcggaatagcggtgcagcgaac 393
|||| || ||||| ||||| ||||||||||||||||| |||||||||||||||| | |
Sbjct: 607 tagcagcggtccgatagtcaaactggcagtcatgcttatcggaatagcggtgcattgcgc 548
Query: 394 agtacatgttaccgcatctgcagttgaatcccgttagcccaaccctcttcctgcaagttg 453
|||||| ||| || |||| |||||||||||| || || ||||||||||||| ||||| |
Sbjct: 547 agtacaagttgccacatcggcagttgaatccggtaagaccaaccctcttccgacaagtgg 488
Query: 454 agcaccgattcggcccctccttcctcttggggctcac 490
|||||||||| || || ||| ||| ||||||| ||||
Sbjct: 487 agcaccgatttggtccttccctccccttggggttcac 451
Score = 44.1 bits (22), Expect = 0.51
Identities = 42/46 (91%), Gaps = 2/46 (4%)
Strand = Plus / Minus
Query: 9 acaatagtacataaacagagctagctaaaatgagaagccacaatac 54
|||||||||||| | ||||||||||| ||||| |||||||||||||
Sbjct: 943 acaatagtacatta-cagagctagct-aaatgcgaagccacaatac 900
Score = 40.1 bits (20), Expect = 7.9
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 217 cagcaaagatggatgatgaa 236
||||||||||||||||||||
Sbjct: 729 cagcaaagatggatgatgaa 710
Score = 40.1 bits (20), Expect = 7.9
Identities = 47/56 (83%)
Strand = Plus / Minus
Query: 523 cagcaggctgcacaacgagtgccttcacgtcaacttgagcaaccgccacctcagcg 578
||||||||||| |||| || | |||||| || ||||||||||| || || ||||||
Sbjct: 421 cagcaggctgcgcaacaagcgtcttcacctcgacttgagcaacagctacttcagcg 366
>dbj|AK069720.1 | Oryza sativa (japonica cultivar-group) cDNA clone:J023026K20, full
insert sequence
Length = 1209
Score = 161 bits (81), Expect = 3e-36
Identities = 183/217 (84%)
Strand = Plus / Minus
Query: 274 cctaaatcttgtcgagcttctctgccttcaccactgggttggccttggcgatggcatccc 333
||||||| ||||| || ||||| ||||||||||| || || |||||||| || |||||||
Sbjct: 664 cctaaattttgtcaagtttctccgccttcaccaccggattagccttggcaatagcatccc 605
Query: 334 tagctgcagtccggtagtcgaactggcagtcatgcttgtcggaatagcggtgcagcgaac 393
|||| || ||||| ||||| ||||||||||||||||| |||||||||||||||| | |
Sbjct: 604 tagcagcggtccgatagtcaaactggcagtcatgcttatcggaatagcggtgcattgcgc 545
Query: 394 agtacatgttaccgcatctgcagttgaatcccgttagcccaaccctcttcctgcaagttg 453
|||||| ||| || |||| |||||||||||| || || ||||||||||||| ||||| |
Sbjct: 544 agtacaagttgccacatcggcagttgaatccggtaagaccaaccctcttccgacaagtgg 485
Query: 454 agcaccgattcggcccctccttcctcttggggctcac 490
|||||||||| || || ||| ||| ||||||| ||||
Sbjct: 484 agcaccgatttggtccttccctccccttggggttcac 448
Score = 44.1 bits (22), Expect = 0.51
Identities = 42/46 (91%), Gaps = 2/46 (4%)
Strand = Plus / Minus
Query: 9 acaatagtacataaacagagctagctaaaatgagaagccacaatac 54
|||||||||||| | ||||||||||| ||||| |||||||||||||
Sbjct: 940 acaatagtacatta-cagagctagct-aaatgcgaagccacaatac 897
Score = 40.1 bits (20), Expect = 7.9
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 217 cagcaaagatggatgatgaa 236
||||||||||||||||||||
Sbjct: 726 cagcaaagatggatgatgaa 707
Score = 40.1 bits (20), Expect = 7.9
Identities = 47/56 (83%)
Strand = Plus / Minus
Query: 523 cagcaggctgcacaacgagtgccttcacgtcaacttgagcaaccgccacctcagcg 578
||||||||||| |||| || | |||||| || ||||||||||| || || ||||||
Sbjct: 418 cagcaggctgcgcaacaagcgtcttcacctcgacttgagcaacagctacttcagcg 363
>dbj|AK062342.1 | Oryza sativa (japonica cultivar-group) cDNA clone:001-101-F03, full
insert sequence
Length = 631
Score = 161 bits (81), Expect = 3e-36
Identities = 183/217 (84%)
Strand = Plus / Minus
Query: 274 cctaaatcttgtcgagcttctctgccttcaccactgggttggccttggcgatggcatccc 333
||||||| ||||| || ||||| ||||||||||| || || |||||||| || |||||||
Sbjct: 305 cctaaattttgtcaagtttctccgccttcaccaccggattagccttggcaatagcatccc 246
Query: 334 tagctgcagtccggtagtcgaactggcagtcatgcttgtcggaatagcggtgcagcgaac 393
|||| || ||||| ||||| ||||||||||||||||| |||||||||||||||| | |
Sbjct: 245 tagcagcggtccgatagtcaaactggcagtcatgcttatcggaatagcggtgcattgcgc 186
Query: 394 agtacatgttaccgcatctgcagttgaatcccgttagcccaaccctcttcctgcaagttg 453
|||||| ||| || |||| |||||||||||| || || ||||||||||||| ||||| |
Sbjct: 185 agtacaagttgccacatcggcagttgaatccggtaagaccaaccctcttccgacaagtgg 126
Query: 454 agcaccgattcggcccctccttcctcttggggctcac 490
|||||||||| || || ||| ||| ||||||| ||||
Sbjct: 125 agcaccgatttggtccttccctccccttggggttcac 89
Score = 44.1 bits (22), Expect = 0.51
Identities = 42/46 (91%), Gaps = 2/46 (4%)
Strand = Plus / Minus
Query: 9 acaatagtacataaacagagctagctaaaatgagaagccacaatac 54
|||||||||||| | ||||||||||| ||||| |||||||||||||
Sbjct: 581 acaatagtacatta-cagagctagct-aaatgcgaagccacaatac 538
Score = 40.1 bits (20), Expect = 7.9
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 217 cagcaaagatggatgatgaa 236
||||||||||||||||||||
Sbjct: 367 cagcaaagatggatgatgaa 348
Score = 40.1 bits (20), Expect = 7.9
Identities = 47/56 (83%)
Strand = Plus / Minus
Query: 523 cagcaggctgcacaacgagtgccttcacgtcaacttgagcaaccgccacctcagcg 578
||||||||||| |||| || | |||||| || ||||||||||| || || ||||||
Sbjct: 59 cagcaggctgcgcaacaagcgtcttcacctcgacttgagcaacagctacttcagcg 4
>dbj|AK060008.1 | Oryza sativa (japonica cultivar-group) cDNA clone:006-302-C08, full
insert sequence
Length = 1021
Score = 161 bits (81), Expect = 3e-36
Identities = 183/217 (84%)
Strand = Plus / Minus
Query: 274 cctaaatcttgtcgagcttctctgccttcaccactgggttggccttggcgatggcatccc 333
||||||| ||||| || ||||| ||||||||||| || || |||||||| || |||||||
Sbjct: 663 cctaaattttgtcaagtttctccgccttcaccaccggattagccttggcaatagcatccc 604
Query: 334 tagctgcagtccggtagtcgaactggcagtcatgcttgtcggaatagcggtgcagcgaac 393
|||| || ||||| ||||| ||||||||||||||||| |||||||||||||||| | |
Sbjct: 603 tagcagcggtccgatagtcaaactggcagtcatgcttatcggaatagcggtgcattgcgc 544
Query: 394 agtacatgttaccgcatctgcagttgaatcccgttagcccaaccctcttcctgcaagttg 453
|||||| ||| || |||| |||||||||||| || || ||||||||||||| ||||| |
Sbjct: 543 agtacaagttgccacatcggcagttgaatccggtaagaccaaccctcttccgacaagtgg 484
Query: 454 agcaccgattcggcccctccttcctcttggggctcac 490
|||||||||| || || ||| ||| ||||||| ||||
Sbjct: 483 agcaccgatttggtccttccctccccttggggttcac 447
Score = 44.1 bits (22), Expect = 0.51
Identities = 42/46 (91%), Gaps = 2/46 (4%)
Strand = Plus / Minus
Query: 9 acaatagtacataaacagagctagctaaaatgagaagccacaatac 54
|||||||||||| | ||||||||||| ||||| |||||||||||||
Sbjct: 939 acaatagtacatta-cagagctagct-aaatgcgaagccacaatac 896
Score = 40.1 bits (20), Expect = 7.9
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 217 cagcaaagatggatgatgaa 236
||||||||||||||||||||
Sbjct: 725 cagcaaagatggatgatgaa 706
Score = 40.1 bits (20), Expect = 7.9
Identities = 47/56 (83%)
Strand = Plus / Minus
Query: 523 cagcaggctgcacaacgagtgccttcacgtcaacttgagcaaccgccacctcagcg 578
||||||||||| |||| || | |||||| || ||||||||||| || || ||||||
Sbjct: 417 cagcaggctgcgcaacaagcgtcttcacctcgacttgagcaacagctacttcagcg 362
>emb|AL844522.7 | Zebrafish DNA sequence from clone DKEY-113M9, complete sequence
Length = 193193
Score = 40.1 bits (20), Expect = 7.9
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 40 gagaagccacaatactgacc 59
||||||||||||||||||||
Sbjct: 181122 gagaagccacaatactgacc 181141
Database: nt
Posted date: May 29, 2006 11:10 AM
Number of letters in database: 3,984,495,279
Number of sequences in database: 917,343
Database: /shigen/export/home/twatanab/db/nt/nt.01
Posted date: May 29, 2006 11:16 AM
Number of letters in database: 3,988,174,986
Number of sequences in database: 835,257
Database: /shigen/export/home/twatanab/db/nt/nt.02
Posted date: May 29, 2006 11:21 AM
Number of letters in database: 3,991,246,324
Number of sequences in database: 771,481
Database: /shigen/export/home/twatanab/db/nt/nt.03
Posted date: May 29, 2006 11:27 AM
Number of letters in database: 3,990,718,311
Number of sequences in database: 977,174
Database: /shigen/export/home/twatanab/db/nt/nt.04
Posted date: May 29, 2006 11:29 AM
Number of letters in database: 1,278,410,368
Number of sequences in database: 400,813
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,676,032
Number of Sequences: 3902068
Number of extensions: 4676032
Number of successful extensions: 85070
Number of sequences better than 10.0: 72
Number of HSP's better than 10.0 without gapping: 72
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 84731
Number of HSP's gapped (non-prelim): 317
length of query: 581
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 558
effective length of database: 17,143,297,704
effective search space: 9565960118832
effective search space used: 9565960118832
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)