>PTPRZ_RAT (Q62656) Receptor-type tyrosine-protein phosphatase zeta precursor|
            (EC 3.1.3.48) (R-PTP-zeta) (Phosphacan) (3F8 chondroitin
            sulfate proteoglycan) (3H1 keratan sulfate proteoglycan)
          Length = 2316

 Score = 34.3 bits (77), Expect = 0.38
 Identities = 27/71 (38%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
 Frame = +1

Query: 328  MPSPPQIAPLTETPLREASRPMLLKPPRSPSSVSEQCVH*S--PILQGSPACPADPGSLH 501
            +PS P+   LTETP+ E S   +  P  S S+ S+  +H +  P+L  SP+    P SL 
Sbjct: 1207 LPSGPRDPVLTETPMVEQSSSSVSLPLASESASSKSTLHFTSVPVLNMSPS-DVHPTSLQ 1265

Query: 502  QEPVSQHSTEE 534
            +  V  HS EE
Sbjct: 1266 RLTV-PHSREE 1275

>CO7A1_HUMAN (Q02388) Collagen alpha-1(VII) chain precursor (Long-chain collagen)|
            (LC collagen)
          Length = 2944

 Score = 33.5 bits (75), Expect = 0.64
 Identities = 22/61 (36%), Positives = 26/61 (42%)
 Frame = -3

Query: 491  PGSAGHAGEPCSMGDQWTHCSETEDGLRGGFRSIGLEASRRGVSVRGAI*GGEGMHLPGR 312
            PGS G AG P + G      S    G RG     G    +      G + GGEG  LPGR
Sbjct: 1307 PGSPGRAGNPGTPGAPGLKGSPGLPGPRGDPGERGPRGPKGEPGAPGQVIGGEGPGLPGR 1366

Query: 311  R 309
            +
Sbjct: 1367 K 1367

>CSKI1_RAT (Q8VHK2) Caskin-1 (CASK-interacting protein 1)|
          Length = 1430

 Score = 31.6 bits (70), Expect = 2.4
 Identities = 26/76 (34%), Positives = 31/76 (40%), Gaps = 5/76 (6%)
 Frame = +1

Query: 316  PGRCMPSPPQIAPLTETPLREASRPMLLKPPRSPSSVSEQCVH*SPILQGSPACPAD--- 486
            P    P P  + PL   PL + S    +KPP SP  +  Q V     +QGSP  PA    
Sbjct: 1196 PPPAEPPPTDLMPLPPLPLPDGSARKPVKPPVSPKPILAQPV---SKIQGSPT-PASKKV 1251

Query: 487  --PGSLHQEPVSQHST 528
              PG    E    H T
Sbjct: 1252 PLPGPGSPEVKRAHGT 1267

>COLQ_RAT (O35167) Acetylcholinesterase collagenic tail peptide precursor|
           (AChE Q subunit) (Acetylcholinesterase-associated
           collagen)
          Length = 458

 Score = 31.2 bits (69), Expect = 3.2
 Identities = 24/71 (33%), Positives = 30/71 (42%)
 Frame = +1

Query: 280 IPLLHQIQ*GRRPGRCMPSPPQIAPLTETPLREASRPMLLKPPRSPSSVSEQCVH*SPIL 459
           +P L Q + G     C+  PP   PL   P    SR  LL P     ++ E     SP +
Sbjct: 37  LPGLDQKKRGNHKACCLLMPPP-PPLFPPPFFRGSRSPLLSPDMK--NLLELEASPSPCM 93

Query: 460 QGSPACPADPG 492
           QGS   P  PG
Sbjct: 94  QGSLGSPGPPG 104

>SPB4_GIBZE (Q4HVW2) ATP-dependent rRNA helicase SPB4 (EC 3.6.1.-)|
          Length = 637

 Score = 31.2 bits (69), Expect = 3.2
 Identities = 30/91 (32%), Positives = 39/91 (42%), Gaps = 7/91 (7%)
 Frame = -1

Query: 574 NVLISDSGRRIFVF-------PQCYAEKQALGEVSQDLLDTQVNPAVWEISGHIVLKRRT 416
           NVLIS  GR + +        PQ   E   L E  + LLD    P + +I  H+  +RRT
Sbjct: 164 NVLISSPGRLVELMSSPHVHCPQSSFEVLVLDEADR-LLDLGFKPDLQKILSHLPKQRRT 222

Query: 415 DFEEASEASAWRLLAEVSLSEERFEEVKACI 323
               AS + A   +  V L      EVK  I
Sbjct: 223 GLFSASVSEAVGEIIRVGLRNPVKIEVKVKI 253

>DOT1L_DROME (Q8INR6) Histone-lysine N-methyltransferase, H3 lysine-79 specific|
            (EC 2.1.1.43) (Histone H3-K79 methyltransferase)
            (H3-K79-HMTase) (Protein grappa) (DOT1-like protein)
            (dDOT1L)
          Length = 1848

 Score = 31.2 bits (69), Expect = 3.2
 Identities = 25/70 (35%), Positives = 31/70 (44%), Gaps = 4/70 (5%)
 Frame = +1

Query: 337  PPQIAPLTETPLREASRP----MLLKPPRSPSSVSEQCVH*SPILQGSPACPADPGSLHQ 504
            PPQ  PL   P   ++        ++PP  PSS S Q        Q SPA  A    L Q
Sbjct: 1290 PPQTQPLELLPRASSANSDYSGYRIRPPSRPSSNSSQ----PDYTQVSPAKMALRRHLSQ 1345

Query: 505  EPVSQHSTEE 534
            E +SQH T +
Sbjct: 1346 EKLSQHVTPQ 1355

>COLQ_MOUSE (O35348) Acetylcholinesterase collagenic tail peptide (AChE Q|
           subunit) (Acetylcholinesterase-associated collagen)
           (Fragment)
          Length = 236

 Score = 30.8 bits (68), Expect = 4.2
 Identities = 24/71 (33%), Positives = 30/71 (42%)
 Frame = +1

Query: 280 IPLLHQIQ*GRRPGRCMPSPPQIAPLTETPLREASRPMLLKPPRSPSSVSEQCVH*SPIL 459
           +P L Q + G     C+  PP   PL   P    SR  LL P     ++ E     SP +
Sbjct: 1   LPGLDQKKRGSHKACCLLMPPP-PPLFPPPFFRGSRSPLLSPDMK--NLLELEASPSPCI 57

Query: 460 QGSPACPADPG 492
           QGS   P  PG
Sbjct: 58  QGSLGSPGPPG 68

>RTN4_HUMAN (Q9NQC3) Reticulon-4 (Neurite outgrowth inhibitor) (Nogo protein)|
           (Foocen) (Neuroendocrine-specific protein) (NSP)
           (Neuroendocrine-specific protein C homolog) (RTN-x)
           (Reticulon-5)
          Length = 1192

 Score = 30.8 bits (68), Expect = 4.2
 Identities = 21/66 (31%), Positives = 28/66 (42%)
 Frame = +1

Query: 331 PSPPQIAPLTETPLREASRPMLLKPPRSPSSVSEQCVH*SPILQGSPACPADPGSLHQEP 510
           PSP   A ++ + L E   P    PP  P+SVS Q     P+       PA P S    P
Sbjct: 120 PSPLSAAAVSPSKLPEDDEPPARPPPPPPASVSPQA---EPVWTPPAPAPAAPPSTPAAP 176

Query: 511 VSQHST 528
             + S+
Sbjct: 177 KRRGSS 182

>MYO15_HUMAN (Q9UKN7) Myosin-15 (Myosin XV) (Unconventional myosin-15)|
          Length = 3530

 Score = 30.8 bits (68), Expect = 4.2
 Identities = 25/61 (40%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
 Frame = +1

Query: 331 PSPPQIAPLTETPLREASRPMLLKPPRSPSSVSEQCVH*SPILQGSPACPADP-GSLHQE 507
           P  PQ AP T +       P +  PPR PSS        SP L G P  PA P GSL + 
Sbjct: 644 PPAPQPAPRTLSHWSALLSPPV--PPRPPSSGPPPAPPLSPALSGLPR-PASPYGSLRRH 700

Query: 508 P 510
           P
Sbjct: 701 P 701

>CINA_GEOKA (Q5L0F7) CinA-like protein|
          Length = 414

 Score = 30.4 bits (67), Expect = 5.4
 Identities = 18/50 (36%), Positives = 25/50 (50%)
 Frame = -1

Query: 514 KQALGEVSQDLLDTQVNPAVWEISGHIVLKRRTDFEEASEASAWRLLAEV 365
           + AL     DL+D Q NP +  ++G   +  R   +   EA A RLL EV
Sbjct: 190 ESALETAIADLIDAQSNPTIAPLAGDGEVTLRLTAKHQDEAEAKRLLDEV 239

>MILK1_HUMAN (Q8N3F8) Molecule interacting with Rab13 (MIRab13) (MICAL-like|
           protein 1)
          Length = 863

 Score = 30.0 bits (66), Expect = 7.1
 Identities = 20/62 (32%), Positives = 27/62 (43%), Gaps = 1/62 (1%)
 Frame = +1

Query: 316 PGRCMPSPP-QIAPLTETPLREASRPMLLKPPRSPSSVSEQCVH*SPILQGSPACPADPG 492
           P    PSP   +  L+     + +   LL+PP  P S SE  VH       +P  P +P 
Sbjct: 500 PPSATPSPALSVESLSSESASQTAGAELLEPPAVPKSSSEPAVH-------APGTPGNPV 552

Query: 493 SL 498
           SL
Sbjct: 553 SL 554

>CSKI1_HUMAN (Q8WXD9) Caskin-1 (CASK-interacting protein 1)|
          Length = 1431

 Score = 30.0 bits (66), Expect = 7.1
 Identities = 21/52 (40%), Positives = 22/52 (42%)
 Frame = +1

Query: 316  PGRCMPSPPQIAPLTETPLREASRPMLLKPPRSPSSVSEQCVH*SPILQGSP 471
            P    P P  +A L   P  E       KPP SP  V  Q V   P LQGSP
Sbjct: 1195 PPPAEPPPTDLAHLPPLPPPEGEARKPAKPPVSPKPVLTQPV---PKLQGSP 1243

>CO1A2_RAT (P02466) Collagen alpha-2(I) chain precursor|
          Length = 1372

 Score = 30.0 bits (66), Expect = 7.1
 Identities = 25/69 (36%), Positives = 29/69 (42%)
 Frame = -3

Query: 515 ETGSW*SEPGSAGHAGEPCSMGDQWTHCSETEDGLRGGFRSIGLEASRRGVSVRGAI*GG 336
           ETG+   EPGSAG  G P   G++    S  E G  G     GL  S     + GA    
Sbjct: 362 ETGNK-GEPGSAGAQGPPGPSGEEGKRGSPGEPGSAGPAGPPGLRGSPGSRGLPGADGRA 420

Query: 335 EGMHLPGRR 309
             M  PG R
Sbjct: 421 GVMGPPGNR 429

>COLQ_HUMAN (Q9Y215) Acetylcholinesterase collagenic tail peptide precursor|
           (AChE Q subunit) (Acetylcholinesterase-associated
           collagen)
          Length = 456

 Score = 30.0 bits (66), Expect = 7.1
 Identities = 22/71 (30%), Positives = 29/71 (40%)
 Frame = +1

Query: 280 IPLLHQIQ*GRRPGRCMPSPPQIAPLTETPLREASRPMLLKPPRSPSSVSEQCVH*SPIL 459
           +P L Q + G     C+ +PP   PL   P     R  LL P      +  +    SP +
Sbjct: 37  LPSLDQKKRGGHKACCLLTPPP-PPLFPPPFFRGGRSPLLSPDMKNLMLELETSQ-SPCM 94

Query: 460 QGSPACPADPG 492
           QGS   P  PG
Sbjct: 95  QGSLGSPGPPG 105

>TEGU_EHV1B (P28955) Large tegument protein|
          Length = 3421

 Score = 30.0 bits (66), Expect = 7.1
 Identities = 21/71 (29%), Positives = 30/71 (42%), Gaps = 2/71 (2%)
 Frame = +1

Query: 310  RRPGRCMPSPPQIAPLTETPLREAS--RPMLLKPPRSPSSVSEQCVH*SPILQGSPACPA 483
            R     MP+PP+  P+ E+  +  S  R   L P  +P   S+     S I+ G P    
Sbjct: 2476 RELSNAMPAPPKTTPVVESKQKSDSVDRAPTLPPKAAPLPPSDA----SAIMSGKPVFKY 2531

Query: 484  DPGSLHQEPVS 516
             PG+    P S
Sbjct: 2532 TPGNKSAVPPS 2542

>MOAC_METTH (O26900) Probable molybdenum cofactor biosynthesis protein C|
          Length = 159

 Score = 29.6 bits (65), Expect = 9.3
 Identities = 15/45 (33%), Positives = 26/45 (57%)
 Frame = +3

Query: 561 EMRTLKGTLFSWSQMQALVTTSAKSFSVFPLSNTRPLTGKFVSFD 695
           E +  KG + + +Q+ A+V    +++ + PL +  PLTG  V FD
Sbjct: 48  EKKIEKGNVLATAQIAAIVAVK-RTWEIIPLCHPLPLTGVDVEFD 91

>FTSH_TREPA (O83746) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 609

 Score = 29.6 bits (65), Expect = 9.3
 Identities = 30/115 (26%), Positives = 45/115 (39%)
 Frame = -1

Query: 649 GNTLKDLADVVTNACIWLQENNVPFNVLISDSGRRIFVFPQCYAEKQALGEVSQDLLDTQ 470
           GN +    D+V         +    NV ++  G      PQ   E     E +Q  +D +
Sbjct: 477 GNDISRATDIVRKMITDYGMSEKFQNVALTRRGTGYLAEPQLARE---YSECTQQYVDEE 533

Query: 469 VNPAVWEISGHIVLKRRTDFEEASEASAWRLLAEVSLSEERFEEVKACIFQAAGL 305
           V   + E     V+   T+ +E  E  A RLL   ++  + FEEV  C     GL
Sbjct: 534 VARVLAE-RYRAVVALLTEKKELLEYIATRLLERETIERDEFEEVIRCEHDLEGL 587


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 98,146,805
Number of Sequences: 219361
Number of extensions: 2032825
Number of successful extensions: 6349
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 5601
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6326
length of database: 80,573,946
effective HSP length: 109
effective length of database: 56,663,597
effective search space used: 7026286028
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)