>VP5_RDVF (Q85437) Minor core protein P5|
          Length = 801

 Score = 28.5 bits (62), Expect = 4.7
 Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
 Frame = +3

Query: 12  APVHTGSKCPPDYTFTKVGSV**QRYVQTICSDELLCTVDDIHAH-YSYVDYRVETRPVL 188
           AP++   KC PDY            Y  T+ S ELL    +   H Y+ +DY + TR VL
Sbjct: 140 APLYNVPKCGPDY------------YGPTVYS-ELLSLATNARTHWYATIDYSMFTRSVL 186

>VP5_RDVA (P14583) Minor core protein P5|
          Length = 801

 Score = 28.5 bits (62), Expect = 4.7
 Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
 Frame = +3

Query: 12  APVHTGSKCPPDYTFTKVGSV**QRYVQTICSDELLCTVDDIHAH-YSYVDYRVETRPVL 188
           AP++   KC PDY            Y  T+ S ELL    +   H Y+ +DY + TR VL
Sbjct: 140 APLYNVPKCGPDY------------YGPTVYS-ELLSLATNARTHWYATIDYSMFTRSVL 186

>TRA6_BACST (Q45618) Putative transposase for insertion sequence element IS5376|
          Length = 400

 Score = 27.7 bits (60), Expect = 8.0
 Identities = 14/30 (46%), Positives = 19/30 (63%)
 Frame = +3

Query: 132 DIHAHYSYVDYRVETRPVLQVDAFLAGESA 221
           ++ A  S V   V+TRP+   DAFL GES+
Sbjct: 371 EMAATISPVSVEVDTRPLSVYDAFLRGESS 400


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 32,371,027
Number of Sequences: 219361
Number of extensions: 541739
Number of successful extensions: 1247
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1225
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1247
length of database: 80,573,946
effective HSP length: 66
effective length of database: 66,096,120
effective search space used: 1586306880
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)