ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal16i11
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY206371.1| Triticum aestivum photosystem II polypeptide mRNA... 111 1e-21
2ref|XM_480562.1| Oryza sativa (japonica cultivar-group), mRNA 70 4e-09
3ref|XM_507163.1| PREDICTED Oryza sativa (japonica cultivar-group... 70 4e-09
4dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 70 4e-09
5dbj|AP004589.3| Oryza sativa (japonica cultivar-group) genomic D... 70 4e-09
6dbj|AK121083.1| Oryza sativa (japonica cultivar-group) cDNA clon... 70 4e-09
7dbj|AK105055.1| Oryza sativa (japonica cultivar-group) cDNA clon... 70 4e-09
8gb|U86018.1|OSU86018 Oryza sativa photosystem II 10 kDa polypept... 70 4e-09
9ref|NM_190628.1| Oryza sativa (japonica cultivar-group), predic... 44 0.23
10dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.23
11dbj|AP004072.2| Oryza sativa (japonica cultivar-group) genomic D... 44 0.23
12dbj|AK101770.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.23
13gb|AC136219.2| Oryza sativa (japonica cultivar-group) chromosome... 42 0.90
14dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 42 0.90
15dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 42 0.90
16gb|CP000109.1| Thiomicrospira crunogena XCL-2, complete genome 40 3.6
17ref|XM_469295.1| Oryza sativa (japonica cultivar-group), mRNA 40 3.6
18ref|XM_525966.1| PREDICTED: Pan troglodytes similar to Homeobox ... 40 3.6
19ref|XM_472288.1| Oryza sativa (japonica cultivar-group), predic... 40 3.6
20gb|AC133335.4| Oryza sativa chromosome 3 BAC OSJNBa0005H05 genom... 40 3.6
21gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome 40 3.6
22ref|XM_368606.1| Magnaporthe grisea 70-15 chromosome VI hypothet... 40 3.6
23ref|NM_007967.1| Mus musculus even skipped homeotic gene 2 homol... 40 3.6
24gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 3.6
25gb|AC127547.2| Mus musculus BAC clone RP24-498C13 from chromosom... 40 3.6
26ref|XM_542824.2| PREDICTED: Canis familiaris similar to zinc fin... 40 3.6
27emb|BX248343.1| Mycobacterium bovis subsp. bovis AF2122/97 compl... 40 3.6
28gb|AC113123.8| Mus musculus chromosome 8, clone RP23-349O15, com... 40 3.6
29emb|CR933498.1|OSJN00303 Oryza sativa genomic DNA, chromosome 4,... 40 3.6
30emb|BX842580.1| Mycobacterium tuberculosis H37Rv complete genome... 40 3.6
31emb|AL662990.3|OSJN00194 Oryza sativa genomic DNA, chromosome 4,... 40 3.6
32emb|AJ277379.1|TTU277379 Triticum turgidum subsp. durum mRNA for... 40 3.6
33emb|AJ277377.1|TTU277377 Triticum turgidum subsp. durum Pdi gene... 40 3.6
34gb|AE005758.1| Caulobacter crescentus CB15 section 84 of 359 of ... 40 3.6
35gb|AF262979.1|AF262979 Triticum aestivum protein disulfide isome... 40 3.6
36ref|XM_939705.1| PREDICTED: Homo sapiens similar to Homeobox eve... 40 3.6
37ref|XM_292968.5| PREDICTED: Homo sapiens similar to Homeobox eve... 40 3.6
38gb|S34322.1|S34320S3 Evx-2=even-skipped 2 homeobox homolog [mice... 40 3.6
39dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 3.6
40dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 3.6
41dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 3.6
42gb|AC079889.20| Oryza sativa chromosome 3 BAC OSJNBa0092M19 geno... 40 3.6
43gb|AC009336.13|AC009336 Homo sapiens chromosome 2, clone RP11-38... 40 3.6
44gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 40 3.6
45dbj|AP003630.3| Oryza sativa (japonica cultivar-group) genomic D... 40 3.6
46dbj|AK119958.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 3.6
47emb|AJ329487.1|HSA329487 Homo sapiens genomic sequence surroundi... 40 3.6
48gb|AC157835.1| Oryza sativa (japonica cultivar-group) BAC clone ... 40 3.6
49dbj|AK059913.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 3.6
50emb|AJ868105.1| Triticum aestivum subsp. aestivum mRNA for prote... 40 3.6
51emb|AJ868102.1| Triticum aestivum subsp. aestivum PDI gene for p... 40 3.6
52emb|AL731599.2|OSJN00244 Oryza sativa genomic DNA, chromosome 4,... 40 3.6
53gb|M93128.1|MUSEVX2A Mouse homeobox protein (EVX2) mRNA, complet... 40 3.6 
>gb|AY206371.1| Triticum aestivum photosystem II polypeptide mRNA, partial cds;
           nuclear gene for chloroplast product
          Length = 481

 Score =  111 bits (56), Expect = 1e-21
 Identities = 81/91 (89%)
 Strand = Plus / Minus

                                                                       
Query: 183 gtgttacaggtagatgctttcttagccggcgagagcgctggtattgtagactannnnggc 242
           |||||||| ||||||||| ||||||||||||||||||||||| |||||||| |    | |
Sbjct: 323 gtgttacacgtagatgctctcttagccggcgagagcgctggtgttgtagacgaggaggac 264

                                          
Query: 243 gccgccgccgaggaggccggngagggtgacg 273
           |||||||||||||||||||| ||||||||||
Sbjct: 263 gccgccgccgaggaggccggcgagggtgacg 233



 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 64/74 (86%), Gaps = 2/74 (2%)
 Strand = Plus / Minus

                                                                       
Query: 97  ccatctgttcggatgaattactttgcaccgttgatgacatacatgcacatta--tagcta 154
           |||||||||||||| |||||||||||| |||||||  ||||||| ||||  |  ||||||
Sbjct: 425 ccatctgttcggatcaattactttgcatcgttgattgcatacattcacaggaggtagcta 366

                         
Query: 155 cgtagattacagag 168
            |||||||||||||
Sbjct: 365 tgtagattacagag 352
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>ref|XM_480562.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 616

 Score = 69.9 bits (35), Expect = 4e-09
 Identities = 57/66 (86%)
 Strand = Plus / Minus

                                                                       
Query: 204 ttagccggcgagagcgctggtattgtagactannnnggcgccgccgccgaggaggccggn 263
           |||||||||||| |||||||| |||||||| |    |||||||||||||||||| |||| 
Sbjct: 477 ttagccggcgagggcgctggtgttgtagacgaggagggcgccgccgccgaggagcccggc 418

                 
Query: 264 gagggt 269
           ||||||
Sbjct: 417 gagggt 412
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>ref|XM_507163.1| PREDICTED Oryza sativa (japonica cultivar-group), P0556A11.19 mRNA
          Length = 711

 Score = 69.9 bits (35), Expect = 4e-09
 Identities = 57/66 (86%)
 Strand = Plus / Minus

                                                                       
Query: 204 ttagccggcgagagcgctggtattgtagactannnnggcgccgccgccgaggaggccggn 263
           |||||||||||| |||||||| |||||||| |    |||||||||||||||||| |||| 
Sbjct: 473 ttagccggcgagggcgctggtgttgtagacgaggagggcgccgccgccgaggagcccggc 414

                 
Query: 264 gagggt 269
           ||||||
Sbjct: 413 gagggt 408
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score = 69.9 bits (35), Expect = 4e-09
 Identities = 57/66 (86%)
 Strand = Plus / Plus

                                                                           
Query: 204     ttagccggcgagagcgctggtattgtagactannnnggcgccgccgccgaggaggccggn 263
               |||||||||||| |||||||| |||||||| |    |||||||||||||||||| |||| 
Sbjct: 5800357 ttagccggcgagggcgctggtgttgtagacgaggagggcgccgccgccgaggagcccggc 5800416

                     
Query: 264     gagggt 269
               ||||||
Sbjct: 5800417 gagggt 5800422
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>dbj|AP004589.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0556A11
          Length = 138096

 Score = 69.9 bits (35), Expect = 4e-09
 Identities = 57/66 (86%)
 Strand = Plus / Plus

                                                                         
Query: 204   ttagccggcgagagcgctggtattgtagactannnnggcgccgccgccgaggaggccggn 263
             |||||||||||| |||||||| |||||||| |    |||||||||||||||||| |||| 
Sbjct: 54502 ttagccggcgagggcgctggtgttgtagacgaggagggcgccgccgccgaggagcccggc 54561

                   
Query: 264   gagggt 269
             ||||||
Sbjct: 54562 gagggt 54567
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>dbj|AK121083.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023063I15, full
           insert sequence
          Length = 711

 Score = 69.9 bits (35), Expect = 4e-09
 Identities = 57/66 (86%)
 Strand = Plus / Minus

                                                                       
Query: 204 ttagccggcgagagcgctggtattgtagactannnnggcgccgccgccgaggaggccggn 263
           |||||||||||| |||||||| |||||||| |    |||||||||||||||||| |||| 
Sbjct: 473 ttagccggcgagggcgctggtgttgtagacgaggagggcgccgccgccgaggagcccggc 414

                 
Query: 264 gagggt 269
           ||||||
Sbjct: 413 gagggt 408
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>dbj|AK105055.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-042-F10, full
           insert sequence
          Length = 640

 Score = 69.9 bits (35), Expect = 4e-09
 Identities = 57/66 (86%)
 Strand = Plus / Minus

                                                                       
Query: 204 ttagccggcgagagcgctggtattgtagactannnnggcgccgccgccgaggaggccggn 263
           |||||||||||| |||||||| |||||||| |    |||||||||||||||||| |||| 
Sbjct: 501 ttagccggcgagggcgctggtgttgtagacgaggagggcgccgccgccgaggagcccggc 442

                 
Query: 264 gagggt 269
           ||||||
Sbjct: 441 gagggt 436
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>gb|U86018.1|OSU86018 Oryza sativa photosystem II 10 kDa polypeptide mRNA, complete cds
          Length = 580

 Score = 69.9 bits (35), Expect = 4e-09
 Identities = 57/66 (86%)
 Strand = Plus / Minus

                                                                       
Query: 204 ttagccggcgagagcgctggtattgtagactannnnggcgccgccgccgaggaggccggn 263
           |||||||||||| |||||||| |||||||| |    |||||||||||||||||| |||| 
Sbjct: 416 ttagccggcgagggcgctggtgttgtagacgaggagggcgccgccgccgaggagcccggc 357

                 
Query: 264 gagggt 269
           ||||||
Sbjct: 356 gagggt 351
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>ref|NM_190628.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 333

 Score = 44.1 bits (22), Expect = 0.23
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 240 ggcgccgccgccgaggaggccg 261
           ||||||||||||||||||||||
Sbjct: 75  ggcgccgccgccgaggaggccg 54
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 44.1 bits (22), Expect = 0.23
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                      
Query: 240      ggcgccgccgccgaggaggccg 261
                ||||||||||||||||||||||
Sbjct: 36647721 ggcgccgccgccgaggaggccg 36647742
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>dbj|AP004072.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0529H11
          Length = 165969

 Score = 44.1 bits (22), Expect = 0.23
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 240    ggcgccgccgccgaggaggccg 261
              ||||||||||||||||||||||
Sbjct: 120987 ggcgccgccgccgaggaggccg 121008
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>dbj|AK101770.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033064I03, full
           insert sequence
          Length = 829

 Score = 44.1 bits (22), Expect = 0.23
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 240 ggcgccgccgccgaggaggccg 261
           ||||||||||||||||||||||
Sbjct: 189 ggcgccgccgccgaggaggccg 168
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>gb|AC136219.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0073E05,
              complete sequence
          Length = 178013

 Score = 42.1 bits (21), Expect = 0.90
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 240    ggcgccgccgccgaggaggcc 260
              |||||||||||||||||||||
Sbjct: 141277 ggcgccgccgccgaggaggcc 141297
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 42.1 bits (21), Expect = 0.90
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 240      ggcgccgccgccgaggaggcc 260
                |||||||||||||||||||||
Sbjct: 18668162 ggcgccgccgccgaggaggcc 18668182
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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 42.1 bits (21), Expect = 0.90
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 241     gcgccgccgccgaggaggccg 261
               |||||||||||||||||||||
Sbjct: 4822038 gcgccgccgccgaggaggccg 4822018



 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 243     gccgccgccgaggaggccgg 262
               ||||||||||||||||||||
Sbjct: 2832560 gccgccgccgaggaggccgg 2832579
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>gb|CP000109.1| Thiomicrospira crunogena XCL-2, complete genome
          Length = 2427734

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 102     tgttcggatgaattactttg 121
               ||||||||||||||||||||
Sbjct: 1162207 tgttcggatgaattactttg 1162188
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>ref|XM_469295.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1330

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                      
Query: 244 ccgccgccgaggaggccggngagggtg 270
           ||||||||||||| ||||| |||||||
Sbjct: 338 ccgccgccgaggatgccggtgagggtg 364
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>ref|XM_525966.1| PREDICTED: Pan troglodytes similar to Homeobox even-skipped homolog
            protein 2 (EVX-2) (LOC470585), mRNA
          Length = 2250

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 242  cgccgccgccgaggaggccg 261
            ||||||||||||||||||||
Sbjct: 1944 cgccgccgccgaggaggccg 1925
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>ref|XM_472288.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 594

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 241 gcgccgccgccgaggaggcc 260
           ||||||||||||||||||||
Sbjct: 22  gcgccgccgccgaggaggcc 3
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>gb|AC133335.4| Oryza sativa chromosome 3 BAC OSJNBa0005H05 genomic sequence, complete
             sequence
          Length = 55268

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 25/27 (92%)
 Strand = Plus / Minus

                                        
Query: 244   ccgccgccgaggaggccggngagggtg 270
             ||||||||||||| ||||| |||||||
Sbjct: 16270 ccgccgccgaggatgccggtgagggtg 16244
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>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome
          Length = 4403837

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 242     cgccgccgccgaggaggccg 261
               ||||||||||||||||||||
Sbjct: 3072319 cgccgccgccgaggaggccg 3072338
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>ref|XM_368606.1| Magnaporthe grisea 70-15 chromosome VI hypothetical protein
           (MG00638.4) partial mRNA
          Length = 1092

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 242 cgccgccgccgaggaggccg 261
           ||||||||||||||||||||
Sbjct: 567 cgccgccgccgaggaggccg 586
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>ref|NM_007967.1| Mus musculus even skipped homeotic gene 2 homolog (Evx2), mRNA
          Length = 1428

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 242  cgccgccgccgaggaggccg 261
            ||||||||||||||||||||
Sbjct: 1134 cgccgccgccgaggaggccg 1115
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 25/27 (92%)
 Strand = Plus / Minus

                                           
Query: 244      ccgccgccgaggaggccggngagggtg 270
                ||||||||||||| ||||| |||||||
Sbjct: 26596552 ccgccgccgaggatgccggtgagggtg 26596526
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>gb|AC127547.2| Mus musculus BAC clone RP24-498C13 from chromosome 8, complete
           sequence
          Length = 151070

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 126 gttgatgacatacatgcaca 145
           ||||||||||||||||||||
Sbjct: 695 gttgatgacatacatgcaca 714
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>ref|XM_542824.2| PREDICTED: Canis familiaris similar to zinc finger protein of the
            cerebellum 4 (LOC485704), mRNA
          Length = 2677

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 242  cgccgccgccgaggaggccg 261
            ||||||||||||||||||||
Sbjct: 1245 cgccgccgccgaggaggccg 1226
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>emb|BX248343.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 10/14
          Length = 307550

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 242    cgccgccgccgaggaggccg 261
              ||||||||||||||||||||
Sbjct: 216670 cgccgccgccgaggaggccg 216689
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>gb|AC113123.8| Mus musculus chromosome 8, clone RP23-349O15, complete sequence
          Length = 213829

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 126   gttgatgacatacatgcaca 145
             ||||||||||||||||||||
Sbjct: 30228 gttgatgacatacatgcaca 30209
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>emb|CR933498.1|OSJN00303 Oryza sativa genomic DNA, chromosome 4, BAC clone: B1168G10, complete
            sequence
          Length = 142295

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 242  cgccgccgccgaggaggccg 261
            ||||||||||||||||||||
Sbjct: 2753 cgccgccgccgaggaggccg 2734
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>emb|BX842580.1| Mycobacterium tuberculosis H37Rv complete genome; segment 9/13
          Length = 346051

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 242    cgccgccgccgaggaggccg 261
              ||||||||||||||||||||
Sbjct: 304560 cgccgccgccgaggaggccg 304579
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>emb|AL662990.3|OSJN00194 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0015C06,
             complete sequence
          Length = 147676

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 242   cgccgccgccgaggaggccg 261
             ||||||||||||||||||||
Sbjct: 95676 cgccgccgccgaggaggccg 95657
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>emb|AJ277379.1|TTU277379 Triticum turgidum subsp. durum mRNA for protein disulfide isomerase
           (Pdi gene), clone pPDICW1V
          Length = 1659

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 242 cgccgccgccgaggaggccg 261
           ||||||||||||||||||||
Sbjct: 85  cgccgccgccgaggaggccg 104
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>emb|AJ277377.1|TTU277377 Triticum turgidum subsp. durum Pdi gene for protein disulfide
           isomerase, exons 1-10, clone pPDIGW1VT
          Length = 3476

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 242 cgccgccgccgaggaggccg 261
           ||||||||||||||||||||
Sbjct: 85  cgccgccgccgaggaggccg 104
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>gb|AE005758.1| Caulobacter crescentus CB15 section 84 of 359 of the complete genome
          Length = 10793

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 242  cgccgccgccgaggaggccg 261
            ||||||||||||||||||||
Sbjct: 6740 cgccgccgccgaggaggccg 6721
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>gb|AF262979.1|AF262979 Triticum aestivum protein disulfide isomerase 1 precursor (PDI1)
           mRNA, complete cds
          Length = 1784

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 242 cgccgccgccgaggaggccg 261
           ||||||||||||||||||||
Sbjct: 109 cgccgccgccgaggaggccg 128
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>ref|XM_939705.1| PREDICTED: Homo sapiens similar to Homeobox even-skipped homolog
            protein 2 (EVX-2) (LOC650617), mRNA
          Length = 1611

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 242  cgccgccgccgaggaggccg 261
            ||||||||||||||||||||
Sbjct: 1305 cgccgccgccgaggaggccg 1286
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>ref|XM_292968.5| PREDICTED: Homo sapiens similar to Homeobox even-skipped homolog
            protein 2 (EVX-2) (LOC344191), mRNA
          Length = 1611

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 242  cgccgccgccgaggaggccg 261
            ||||||||||||||||||||
Sbjct: 1305 cgccgccgccgaggaggccg 1286
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>gb|S34322.1|S34320S3 Evx-2=even-skipped 2 homeobox homolog [mice, C3H, Genomic, 720 nt,
           segment 3 of 3]
          Length = 720

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 242 cgccgccgccgaggaggccg 261
           ||||||||||||||||||||
Sbjct: 426 cgccgccgccgaggaggccg 407
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 241      gcgccgccgccgaggaggcc 260
                ||||||||||||||||||||
Sbjct: 19127676 gcgccgccgccgaggaggcc 19127695



 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 242     cgccgccgccgaggaggccg 261
               ||||||||||||||||||||
Sbjct: 4983269 cgccgccgccgaggaggccg 4983250



 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 242     cgccgccgccgaggaggccg 261
               ||||||||||||||||||||
Sbjct: 4824091 cgccgccgccgaggaggccg 4824072
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 127      ttgatgacatacatgcacattata 150
                |||||||||||||||| |||||||
Sbjct: 22335996 ttgatgacatacatgctcattata 22335973
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 25/27 (92%)
 Strand = Plus / Minus

                                           
Query: 244      ccgccgccgaggaggccggngagggtg 270
                ||||||||||||| ||||| |||||||
Sbjct: 26687875 ccgccgccgaggatgccggtgagggtg 26687849
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>gb|AC079889.20| Oryza sativa chromosome 3 BAC OSJNBa0092M19 genomic sequence, complete
              sequence
          Length = 136712

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 25/27 (92%)
 Strand = Plus / Minus

                                         
Query: 244    ccgccgccgaggaggccggngagggtg 270
              ||||||||||||| ||||| |||||||
Sbjct: 119366 ccgccgccgaggatgccggtgagggtg 119340
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>gb|AC009336.13|AC009336 Homo sapiens chromosome 2, clone RP11-387A1, complete sequence
          Length = 175667

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 242   cgccgccgccgaggaggccg 261
             ||||||||||||||||||||
Sbjct: 64402 cgccgccgccgaggaggccg 64421
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 242     cgccgccgccgaggaggccg 261
               ||||||||||||||||||||
Sbjct: 1241141 cgccgccgccgaggaggccg 1241160
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>dbj|AP003630.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0566A10
          Length = 174367

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 127    ttgatgacatacatgcacattata 150
              |||||||||||||||| |||||||
Sbjct: 114419 ttgatgacatacatgctcattata 114396
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>dbj|AK119958.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-184-D01, full
           insert sequence
          Length = 1310

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 241 gcgccgccgccgaggaggcc 260
           ||||||||||||||||||||
Sbjct: 443 gcgccgccgccgaggaggcc 424
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>emb|AJ329487.1|HSA329487 Homo sapiens genomic sequence surrounding NotI site, clone
           NR5-GC22C
          Length = 656

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 242 cgccgccgccgaggaggccg 261
           ||||||||||||||||||||
Sbjct: 60  cgccgccgccgaggaggccg 41
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>gb|AC157835.1| Oryza sativa (japonica cultivar-group) BAC clone OSJNBb0013E09,
             complete sequence
          Length = 54682

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 242   cgccgccgccgaggaggccg 261
             ||||||||||||||||||||
Sbjct: 28548 cgccgccgccgaggaggccg 28567



 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 242   cgccgccgccgaggaggccg 261
             ||||||||||||||||||||
Sbjct: 10386 cgccgccgccgaggaggccg 10405
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>dbj|AK059913.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-209-D10, full
           insert sequence
          Length = 1238

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                      
Query: 244 ccgccgccgaggaggccggngagggtg 270
           ||||||||||||| ||||| |||||||
Sbjct: 376 ccgccgccgaggatgccggtgagggtg 402
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>emb|AJ868105.1| Triticum aestivum subsp. aestivum mRNA for protein disulfide
           isomerase (PDI gene), clone CPDI-4A
          Length = 1745

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 242 cgccgccgccgaggaggccg 261
           ||||||||||||||||||||
Sbjct: 116 cgccgccgccgaggaggccg 135
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>emb|AJ868102.1| Triticum aestivum subsp. aestivum PDI gene for protein disulfide
           isomerase, exons 1-10, clone GPDI-4A
          Length = 3561

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 242 cgccgccgccgaggaggccg 261
           ||||||||||||||||||||
Sbjct: 116 cgccgccgccgaggaggccg 135
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>emb|AL731599.2|OSJN00244 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0053B21,
             complete sequence
          Length = 151936

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 241   gcgccgccgccgaggaggcc 260
             ||||||||||||||||||||
Sbjct: 61197 gcgccgccgccgaggaggcc 61216
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>gb|M93128.1|MUSEVX2A Mouse homeobox protein (EVX2) mRNA, complete cds
          Length = 1428

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 242  cgccgccgccgaggaggccg 261
            ||||||||||||||||||||
Sbjct: 1134 cgccgccgccgaggaggccg 1115


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,866,241
Number of Sequences: 3902068
Number of extensions: 1866241
Number of successful extensions: 31280
Number of sequences better than 10.0: 53
Number of HSP's better than 10.0 without gapping: 54
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 30787
Number of HSP's gapped (non-prelim): 491
length of query: 273
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 251
effective length of database: 17,147,199,772
effective search space: 4303947142772
effective search space used: 4303947142772
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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