ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaal16i04 |
|---|---|
| Clone Library Name | barley_pub |
>GSTU6_ORYSA (Q06398) Probable glutathione S-transferase GSTU6 (EC 2.5.1.18) (28| kDa cold-induced protein) Length = 236 Score = 89.4 bits (220), Expect(2) = 3e-30 Identities = 42/79 (53%), Positives = 53/79 (67%), Gaps = 1/79 (1%) Frame = -1 Query: 674 GTGPCLLPGDPYQRAVARFWAAYIDQNLVAPWWKMFVG-KTDKEKHEGTKQTLAAVEKLE 498 G P ++P DPY+RAVARFWAAY+D + W + G KT++E+ Q +AA+E LE Sbjct: 85 GGRPSVMPSDPYERAVARFWAAYVDDKVRPAWLAILFGSKTEEERAAAVAQAVAALETLE 144 Query: 497 VALRECSSGKPFFGGDNVG 441 A ECS GKPFFGGD VG Sbjct: 145 GAFGECSKGKPFFGGDGVG 163 Score = 62.8 bits (151), Expect(2) = 3e-30 Identities = 29/61 (47%), Positives = 39/61 (63%), Gaps = 1/61 (1%) Frame = -2 Query: 442 GYIDVVLGGMVAWMQGTEALCGLELLDATKTPLLLAWMERFGGMEPAKAVLP-DIDRLVE 266 G++DVVLGG + W + L G L+D +TP L AW ERF + AK V+P D D+L+E Sbjct: 163 GFVDVVLGGYLGWFTAIDKLIGRRLIDPARTPALAAWEERFRATDAAKGVVPDDADKLLE 222 Query: 265 F 263 F Sbjct: 223 F 223
>GSTX2_MAIZE (P50472) Probable glutathione S-transferase BZ2 (EC 2.5.1.18)| (Protein bronze-2) Length = 236 Score = 57.8 bits (138), Expect(2) = 2e-18 Identities = 27/71 (38%), Positives = 42/71 (59%) Frame = -2 Query: 454 ETTSGYIDVVLGGMVAWMQGTEALCGLELLDATKTPLLLAWMERFGGMEPAKAVLPDIDR 275 + G +D+ LG + ++ E L GL L+DA+ TPLL W +RF AK VLPD ++ Sbjct: 158 DAAPGLLDLALGCFLPALRACERLHGLSLIDASATPLLDGWSQRFAAHPAAKRVLPDTEK 217 Query: 274 LVEFAKMKRAQ 242 +V+F + + Q Sbjct: 218 VVQFTRFLQVQ 228 Score = 54.7 bits (130), Expect(2) = 2e-18 Identities = 27/72 (37%), Positives = 40/72 (55%) Frame = -1 Query: 668 GPCLLPGDPYQRAVARFWAAYIDQNLVAPWWKMFVGKTDKEKHEGTKQTLAAVEKLEVAL 489 G LLP DPY+RA+ RFW A+ID + + T + + + T AA+ LE A Sbjct: 85 GSLLLPDDPYERAMHRFWTAFIDDKFWPALDAVSLAPTPGARAQAAEDTRAALSLLEEAF 144 Query: 488 RECSSGKPFFGG 453 ++ S+G+ FF G Sbjct: 145 KDRSNGRAFFSG 156
>GSTX6_SOYBN (P32110) Probable glutathione S-transferase (EC 2.5.1.18) (Heat| shock protein 26A) (G2-4) Length = 225 Score = 60.5 bits (145), Expect(2) = 4e-13 Identities = 30/74 (40%), Positives = 45/74 (60%) Frame = -1 Query: 659 LLPGDPYQRAVARFWAAYIDQNLVAPWWKMFVGKTDKEKHEGTKQTLAAVEKLEVALREC 480 +LP DPYQRA+ARFW+ +ID +V K +KE+ + ++T A++ LE L++ Sbjct: 86 ILPSDPYQRALARFWSKFIDDKIVGAVSKSVFTVDEKEREKNVEETYEALQFLENELKD- 144 Query: 479 SSGKPFFGGDNVGL 438 K FFGG+ GL Sbjct: 145 ---KKFFGGEEFGL 155 Score = 33.5 bits (75), Expect(2) = 4e-13 Identities = 17/64 (26%), Positives = 29/64 (45%) Frame = -2 Query: 442 GYIDVVLGGMVAWMQGTEALCGLELLDATKTPLLLAWMERFGGMEPAKAVLPDIDRLVEF 263 G +D+ + W+ + + GL+L + K P+L W + F VLP D L + Sbjct: 154 GLVDIAAVFIAFWIPIFQEIAGLQLFTSEKFPILYKWSQEFLNHPFVHEVLPPRDPLFAY 213 Query: 262 AKMK 251 K + Sbjct: 214 FKAR 217
>GSTX4_TOBAC (Q03666) Probable glutathione S-transferase (EC 2.5.1.18)| (Auxin-induced protein PCNT107) Length = 221 Score = 55.1 bits (131), Expect(2) = 1e-11 Identities = 32/75 (42%), Positives = 44/75 (58%) Frame = -1 Query: 665 PCLLPGDPYQRAVARFWAAYIDQNLVAPWWKMFVGKTDKEKHEGTKQTLAAVEKLEVALR 486 P LLP DPY RA ARFWA YID+ L K++ K +E+ K + ++ LE AL Sbjct: 84 PNLLPSDPYDRAQARFWADYIDKKLYDFGRKLWTTK-GEEQEAAKKDFIECLKVLEGALG 142 Query: 485 ECSSGKPFFGGDNVG 441 + KP+FGG++ G Sbjct: 143 D----KPYFGGESFG 153 Score = 34.3 bits (77), Expect(2) = 1e-11 Identities = 19/70 (27%), Positives = 31/70 (44%) Frame = -2 Query: 442 GYIDVVLGGMVAWMQGTEALCGLELLDATKTPLLLAWMERFGGMEPAKAVLPDIDRLVEF 263 G++D+ L G +W E + P +AW +R E LPD +++EF Sbjct: 153 GFVDIALIGYYSWFYAYETFGNFST--EAECPKFVAWAKRCMQRESVAKSLPDQPKVLEF 210 Query: 262 AKMKRAQKAL 233 K+ R + L Sbjct: 211 VKVLRQKFGL 220
>GSTXC_TOBAC (P49332) Probable glutathione S-transferase parC (EC 2.5.1.18)| (Auxin-regulated protein parC) Length = 221 Score = 54.7 bits (130), Expect(2) = 1e-11 Identities = 31/75 (41%), Positives = 44/75 (58%) Frame = -1 Query: 665 PCLLPGDPYQRAVARFWAAYIDQNLVAPWWKMFVGKTDKEKHEGTKQTLAAVEKLEVALR 486 P LLP DPY RA ARFWA YID+ L K++ K +E+ K + ++ LE AL Sbjct: 84 PSLLPSDPYDRAQARFWADYIDKKLYDFGRKLWATK-GEEQEAAKKDFIECLKVLEGALG 142 Query: 485 ECSSGKPFFGGDNVG 441 + +P+FGG++ G Sbjct: 143 D----RPYFGGESFG 153 Score = 34.7 bits (78), Expect(2) = 1e-11 Identities = 19/70 (27%), Positives = 31/70 (44%) Frame = -2 Query: 442 GYIDVVLGGMVAWMQGTEALCGLELLDATKTPLLLAWMERFGGMEPAKAVLPDIDRLVEF 263 G++D+ L G +W E + P +AW +R E LPD +++EF Sbjct: 153 GFVDIALIGFYSWFYAYETFGNFST--EAECPKFVAWAKRCMQRESVAKSLPDQPKVLEF 210 Query: 262 AKMKRAQKAL 233 K+ R + L Sbjct: 211 VKVLRQKFGL 220
>LGUL_SOYBN (P46417) Lactoylglutathione lyase (EC 4.4.1.5) (Methylglyoxalase)| (Aldoketomutase) (Glyoxalase I) Length = 219 Score = 61.6 bits (148), Expect(2) = 1e-11 Identities = 30/73 (41%), Positives = 45/73 (61%) Frame = -1 Query: 659 LLPGDPYQRAVARFWAAYIDQNLVAPWWKMFVGKTDKEKHEGTKQTLAAVEKLEVALREC 480 L+P DPY+R+ ARFW YID+ + W KM++ K +E EG K+ ++ ++LE L + Sbjct: 84 LMPSDPYKRSQARFWVDYIDKKIYDTWKKMWLSK-GEEHEEGKKELISIFKQLEETLTD- 141 Query: 479 SSGKPFFGGDNVG 441 KPF+G D G Sbjct: 142 ---KPFYGDDTFG 151 Score = 27.7 bits (60), Expect(2) = 1e-11 Identities = 15/61 (24%), Positives = 29/61 (47%) Frame = -2 Query: 454 ETTSGYIDVVLGGMVAWMQGTEALCGLELLDATKTPLLLAWMERFGGMEPAKAVLPDIDR 275 + T G++D+ L +W E ++ + + P L+AW++R E LPD + Sbjct: 147 DDTFGFVDLCLITFSSWFYTYETYGNFKMEE--ECPKLMAWVKRCMERETVSNTLPDAKK 204 Query: 274 L 272 + Sbjct: 205 V 205
>GSTX1_SOLTU (P32111) Probable glutathione S-transferase (EC 2.5.1.18)| (Pathogenesis-related protein 1) Length = 217 Score = 50.4 bits (119), Expect(2) = 3e-08 Identities = 26/75 (34%), Positives = 37/75 (49%) Frame = -1 Query: 668 GPCLLPGDPYQRAVARFWAAYIDQNLVAPWWKMFVGKTDKEKHEGTKQTLAAVEKLEVAL 489 GP +LP DPY RA+ARFWA Y++ A W F ++EK + + + E Sbjct: 79 GPSILPKDPYDRALARFWAKYVEDKGAAVWKSFFSKGEEQEKAKEEAYEMLKILDNEFKD 138 Query: 488 RECSSGKPFFGGDNV 444 ++C G F D V Sbjct: 139 KKCFVGDKFGFADIV 153 Score = 26.9 bits (58), Expect(2) = 3e-08 Identities = 11/41 (26%), Positives = 20/41 (48%) Frame = -2 Query: 442 GYIDVVLGGMVAWMQGTEALCGLELLDATKTPLLLAWMERF 320 G+ D+V G ++ E + G+ L + K P AW + + Sbjct: 148 GFADIVANGAALYLGILEEVSGIVLATSEKFPNFCAWRDEY 188
>GSTXA_TOBAC (P25317) Probable glutathione S-transferase parA (EC 2.5.1.18)| (Auxin-regulated protein parA) (STR246C protein) Length = 220 Score = 56.6 bits (135), Expect = 7e-08 Identities = 29/73 (39%), Positives = 46/73 (63%) Frame = -1 Query: 659 LLPGDPYQRAVARFWAAYIDQNLVAPWWKMFVGKTDKEKHEGTKQTLAAVEKLEVALREC 480 LLP DPY+R+ ARFWA YID+ + + +++ GK +++ E K+ + ++ LE L Sbjct: 85 LLPSDPYERSQARFWADYIDKKIYSTGRRVWSGK-GEDQEEAKKEFIEILKTLEGEL--- 140 Query: 479 SSGKPFFGGDNVG 441 K +FGGDN+G Sbjct: 141 -GNKTYFGGDNLG 152
>GSTX1_NICPL (P50471) Probable glutathione S-transferase MSR-1 (EC 2.5.1.18)| (Auxin-regulated protein MSR-1) Length = 219 Score = 56.6 bits (135), Expect = 7e-08 Identities = 30/73 (41%), Positives = 44/73 (60%) Frame = -1 Query: 659 LLPGDPYQRAVARFWAAYIDQNLVAPWWKMFVGKTDKEKHEGTKQTLAAVEKLEVALREC 480 LLP DPYQR+ ARFWA YID + + +++ GK +++ E K+ + + LE L Sbjct: 85 LLPSDPYQRSQARFWANYIDNKIYSTGRRVWSGK-GEDQEEAKKEFIEIFKTLEGEL--- 140 Query: 479 SSGKPFFGGDNVG 441 K +FGGDN+G Sbjct: 141 -GNKTYFGGDNLG 152
>GSTX2_TOBAC (Q03663) Probable glutathione S-transferase (EC 2.5.1.18)| (Auxin-induced protein PGNT35/PCNT111) Length = 223 Score = 51.6 bits (122), Expect = 2e-06 Identities = 27/76 (35%), Positives = 43/76 (56%) Frame = -1 Query: 668 GPCLLPGDPYQRAVARFWAAYIDQNLVAPWWKMFVGKTDKEKHEGTKQTLAAVEKLEVAL 489 GP +LP DPY RA+ARFWA ++D + A F + +E+ +G ++ ++ L+ L Sbjct: 79 GPSILPKDPYDRALARFWAKFLDDKVAAVVNTFF--RKGEEQEKGKEEVYEMLKVLDNEL 136 Query: 488 RECSSGKPFFGGDNVG 441 ++ K FF GD G Sbjct: 137 KD----KKFFAGDKFG 148
>GSTXA_ARATH (P46421) Glutathione S-transferase 103-1A (EC 2.5.1.18)| Length = 224 Score = 39.7 bits (91), Expect(2) = 1e-05 Identities = 23/73 (31%), Positives = 37/73 (50%) Frame = -1 Query: 659 LLPGDPYQRAVARFWAAYIDQNLVAPWWKMFVGKTDKEKHEGTKQTLAAVEKLEVALREC 480 +LP DPY+R+ ARF+A +D+ ++ + +K + +Q + LE L Sbjct: 85 ILPQDPYERSKARFFAKLVDEQIMNVGFISMARADEKGREVLAEQVRELIMYLEKEL--- 141 Query: 479 SSGKPFFGGDNVG 441 GK +FGG VG Sbjct: 142 -VGKDYFGGKTVG 153 Score = 28.9 bits (63), Expect(2) = 1e-05 Identities = 18/63 (28%), Positives = 31/63 (49%), Gaps = 2/63 (3%) Frame = -2 Query: 448 TSGYIDVVLGGMVAWM--QGTEALCGLELLDATKTPLLLAWMERFGGMEPAKAVLPDIDR 275 T G++D V G ++ + +G E + GLE++ K P W+ +E K +P + Sbjct: 151 TVGFLDFVAGSLIPFCLERGWEGI-GLEVITEEKFPEFKRWVRNLEKVEIVKDCVPPREE 209 Query: 274 LVE 266 VE Sbjct: 210 HVE 212
>GSTX1_TOBAC (Q03662) Probable glutathione S-transferase (EC 2.5.1.18)| (Auxin-induced protein PGNT1/PCNT110) Length = 223 Score = 47.4 bits (111), Expect = 4e-05 Identities = 28/76 (36%), Positives = 44/76 (57%) Frame = -1 Query: 668 GPCLLPGDPYQRAVARFWAAYIDQNLVAPWWKMFVGKTDKEKHEGTKQTLAAVEKLEVAL 489 GP +LP DPY RA+ARFWA ++D + A K F+ K +E+ + ++ ++ L+ L Sbjct: 79 GPSILPKDPYDRALARFWAKFLDDKVPAV-VKTFLRK-GEEQEKDKEEVCEMLKVLDNEL 136 Query: 488 RECSSGKPFFGGDNVG 441 ++ K FF GD G Sbjct: 137 KD----KKFFVGDKFG 148
>GSTX3_TOBAC (Q03664) Probable glutathione S-transferase (EC 2.5.1.18)| (Auxin-induced protein PCNT103) Length = 223 Score = 46.6 bits (109), Expect = 7e-05 Identities = 25/76 (32%), Positives = 42/76 (55%) Frame = -1 Query: 668 GPCLLPGDPYQRAVARFWAAYIDQNLVAPWWKMFVGKTDKEKHEGTKQTLAAVEKLEVAL 489 GP +LP DPY RA+ARFW+ ++ + A F + +E+ +G ++ ++ L+ L Sbjct: 79 GPSILPKDPYDRALARFWSKFLGDKVAAVVNTFF--RKGEEQEKGKEEVYEMLKVLDNEL 136 Query: 488 RECSSGKPFFGGDNVG 441 ++ K FF GD G Sbjct: 137 KD----KKFFVGDKFG 148
>DAG1_BOVIN (O18738) Dystroglycan precursor (Dystrophin-associated glycoprotein| 1) [Contains: Alpha-dystroglycan (Alpha-DG); Beta-dystroglycan (Beta-DG)] Length = 895 Score = 32.7 bits (73), Expect = 1.0 Identities = 22/64 (34%), Positives = 30/64 (46%), Gaps = 3/64 (4%) Frame = +1 Query: 193 LLLEIPILLSHFRLEPSEHVSSWQTQ---PTYQYLAELP*QVPFHQSAPSMPAVTGFWWR 363 LLL + + SH+ EPSE V W+ Q + L++L VP P AV G +R Sbjct: 20 LLLSVAVTQSHWPSEPSEAVRDWENQLEASMHSALSDLHETVPTVVGIPDGTAVVGRSFR 79 Query: 364 QGAP 375 P Sbjct: 80 VTIP 83
>GSTU1_ORYSA (O65032) Probable glutathione S-transferase GSTU1 (EC 2.5.1.18)| Length = 231 Score = 32.3 bits (72), Expect = 1.3 Identities = 29/87 (33%), Positives = 37/87 (42%), Gaps = 12/87 (13%) Frame = -1 Query: 665 PCLLP----GDP---YQRAVARFWAAYIDQNLV---APWWKMFVGKTDKEKHEGTKQTLA 516 P LLP GD Y RA ARFWA Y+D+ L + W++ +G Q A Sbjct: 84 PHLLPPANSGDADAAYARATARFWADYVDRKLYDCGSRLWRL----------KGEPQAAA 133 Query: 515 AVEKLEV--ALRECSSGKPFFGGDNVG 441 E E+ L + FFGG G Sbjct: 134 GREMAEILRTLEAELGDREFFGGGGGG 160
>DAG1_HUMAN (Q14118) Dystroglycan precursor (Dystrophin-associated glycoprotein| 1) [Contains: Alpha-dystroglycan (Alpha-DG); Beta-dystroglycan (Beta-DG)] Length = 895 Score = 32.0 bits (71), Expect = 1.8 Identities = 22/64 (34%), Positives = 30/64 (46%), Gaps = 3/64 (4%) Frame = +1 Query: 193 LLLEIPILLSHFRLEPSEHVSSWQTQ---PTYQYLAELP*QVPFHQSAPSMPAVTGFWWR 363 LLL + + SH+ EPSE V W+ Q + L++L VP P AV G +R Sbjct: 20 LLLSVVMAQSHWPSEPSEAVRDWENQLEASMHSVLSDLHEAVPTVVGIPDGTAVVGRSFR 79 Query: 364 QGAP 375 P Sbjct: 80 VTIP 83
>DAG1_MOUSE (Q62165) Dystroglycan precursor (Dystrophin-associated glycoprotein| 1) [Contains: Alpha-dystroglycan (Alpha-DG); Beta-dystroglycan (Beta-DG)] Length = 893 Score = 31.2 bits (69), Expect = 3.0 Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 3/64 (4%) Frame = +1 Query: 193 LLLEIPILLSHFRLEPSEHVSSWQTQ---PTYQYLAELP*QVPFHQSAPSMPAVTGFWWR 363 LLL + + +H+ EPSE V W+ Q + L++ VP P AV G +R Sbjct: 18 LLLSVAVAQAHWPSEPSEAVRDWKNQLEASMHSVLSDFQEAVPTVVGIPDGTAVVGRSFR 77 Query: 364 QGAP 375 P Sbjct: 78 VSIP 81
>ZN646_HUMAN (O15015) Zinc finger protein 646| Length = 1829 Score = 30.8 bits (68), Expect = 3.9 Identities = 15/38 (39%), Positives = 17/38 (44%) Frame = +2 Query: 551 CPFCPRTSSTMARLDSDQCRRPRTERRHVGRGRQGAGR 664 CP CP+T S L Q RR GR R+ A R Sbjct: 1328 CPTCPKTYSNRMALKDHQRLHSENRRRRAGRSRRTAVR 1365
>YL_DROME (P98163) Putative vitellogenin receptor precursor (Protein yolkless)| (YL) Length = 1984 Score = 30.8 bits (68), Expect = 3.9 Identities = 20/40 (50%), Positives = 26/40 (65%), Gaps = 2/40 (5%) Frame = +3 Query: 297 ALAGS-IPPKRSIHA-SSNGVLVASRSSRPQSASVPCIHA 410 AL GS I K SI+ ++ ++VA RS +PQ AS PC HA Sbjct: 1702 ALYGSRICHKISINVLNAQDIVVAGRSRQPQKASHPCAHA 1741
>RIMS1_HUMAN (Q86UR5) Regulating synaptic membrane exocytosis protein 1| (Rab3-interacting molecule 1) (RIM 1) Length = 1692 Score = 30.4 bits (67), Expect = 5.1 Identities = 18/49 (36%), Positives = 22/49 (44%), Gaps = 2/49 (4%) Frame = +1 Query: 364 QGAPGHRAPR--FLASMRPYHPTRRQCSPTLSPPKNGFPLEHSLRATSS 504 QG P R P S+ HPTRR SPT + P++H R S Sbjct: 962 QGKPRSRLPNVPLQRSLDEIHPTRRSRSPTRHHDASRSPVDHRTRDVDS 1010
>DAG1_RABIT (Q28685) Dystroglycan precursor (Dystrophin-associated glycoprotein| 1) [Contains: Alpha-dystroglycan (Alpha-DG); Beta-dystroglycan (Beta-DG)] Length = 895 Score = 30.4 bits (67), Expect = 5.1 Identities = 21/64 (32%), Positives = 30/64 (46%), Gaps = 3/64 (4%) Frame = +1 Query: 193 LLLEIPILLSHFRLEPSEHVSSWQTQ---PTYQYLAELP*QVPFHQSAPSMPAVTGFWWR 363 LLL + + SH+ EPSE V W+ Q + L++L +P P AV G +R Sbjct: 20 LLLCVAVAQSHWPSEPSEAVRDWENQLEASMHSVLSDLHEALPTVVGIPDGTAVVGRSFR 79 Query: 364 QGAP 375 P Sbjct: 80 VTIP 83
>CTPV_MYCTU (P77894) Probable cation-transporting ATPase V (EC 3.6.3.-)| Length = 770 Score = 30.4 bits (67), Expect = 5.1 Identities = 19/67 (28%), Positives = 26/67 (38%) Frame = -3 Query: 522 ARSSGEARGGPKGMLQWKAVLWRRQRRATLTSCWVVWSHGCKEPRRSVAWSSLTPPKPRY 343 +R G RG +G W RR+RR L W+ G S+ + + Y Sbjct: 109 SRCGGRPRGPVRGSASWPGEQNRRERRTWLPRVWLALPLGLLALGSSMFFGA-------Y 161 Query: 342 CWHGWSA 322 W GW A Sbjct: 162 PWAGWLA 168
>RGF3_SCHPO (Q9Y7U5) Rho1 guanine nucleotide exchange factor 3| Length = 1275 Score = 29.6 bits (65), Expect = 8.7 Identities = 22/71 (30%), Positives = 33/71 (46%) Frame = +3 Query: 252 FILANSTNLSISGRTALAGSIPPKRSIHASSNGVLVASRSSRPQSASVPCIHATIPPNTT 431 + L N +LS S L S P + S L +S + RPQS P + PPN Sbjct: 196 YSLYNDISLSCSPEPYLPLS-PTRSPARTPSPIRLYSSDALRPQSPLSPSVEYLTPPNPY 254 Query: 432 SM*PDVVSSKE 464 S+ D+ S+++ Sbjct: 255 SLKSDISSTRQ 265
>GSTO1_HUMAN (P78417) Glutathione transferase omega-1 (EC 2.5.1.18) (GSTO 1-1)| Length = 241 Score = 29.6 bits (65), Expect = 8.7 Identities = 25/92 (27%), Positives = 42/92 (45%), Gaps = 2/92 (2%) Frame = -1 Query: 668 GPCLLPGDPYQRAVARFWAAYIDQNLVAPWWKMFVGKTDKEKHEGTKQTL-AAVEKLEVA 492 G LLP DPY++A + + V F+ +KE + G K+ KLE Sbjct: 99 GKKLLPDDPYEKACQKMILELFSK--VPSLVGSFIRSQNKEDYAGLKEEFRKEFTKLEEV 156 Query: 491 LRECSSGKPFFGGDNVGLH*RRV-GWYGRMDA 399 L + FFGG+++ + + W+ R++A Sbjct: 157 L--TNKKTTFFGGNSISMIDYLIWPWFERLEA 186 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 107,206,671 Number of Sequences: 219361 Number of extensions: 2442098 Number of successful extensions: 7087 Number of sequences better than 10.0: 24 Number of HSP's better than 10.0 without gapping: 6688 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 7077 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6598423128 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
