>emb|AJ234848.1|HVU234848 Hordeum vulgare genomic DNA fragment; clone MWG2227
          Length = 399

 Score = 56.0 bits (28), Expect = 7e-05
 Identities = 32/34 (94%)
 Strand = Plus / Plus

                                             
Query: 293 cacaatatggcgcccgacgattctagccttgcct 326
           ||||||||||  ||||||||||||||||||||||
Sbjct: 1   cacaatatggnncccgacgattctagccttgcct 34

>gb|AC120124.9| Mus musculus chromosome 7, clone RP23-21A23, complete sequence
          Length = 237001

 Score = 46.1 bits (23), Expect = 0.070
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                         
Query: 119    ttgaaccttaattgctacaacatgagt 145
              ||||||||||||||||| |||||||||
Sbjct: 145185 ttgaaccttaattgctaaaacatgagt 145211

>ref|XM_646902.1| Entamoeba histolytica HM-1:IMSS protein kinase (137.t00015) partial
            mRNA
          Length = 5244

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 143  agttgatcctaatccaattttt 164
            ||||||||||||||||||||||
Sbjct: 4536 agttgatcctaatccaattttt 4515

>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome
          Length = 3188609

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 227     gcgcaaccatggccatcggcc 247
               |||||||||||||||||||||
Sbjct: 3129472 gcgcaaccatggccatcggcc 3129452

>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome
          Length = 5513844

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 249     tctcggaggcggccggcggcc 269
               |||||||||||||||||||||
Sbjct: 3708119 tctcggaggcggccggcggcc 3708139

>gb|AC093178.4| Oryza sativa (japonica cultivar-group) chromosome 10 clone
             OSJNBb0091B12, complete sequence
          Length = 137568

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 255   aggcggccggcggccatagaa 275
             |||||||||||||||||||||
Sbjct: 12132 aggcggccggcggccatagaa 12112

>gb|AC109136.1| Homo sapiens chromosome 16 clone RP11-629D22, complete sequence
          Length = 183080

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 185   ctaacctgctggacaaggcca 205
             |||||||||||||||||||||
Sbjct: 83384 ctaacctgctggacaaggcca 83364

>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
               sequence
          Length = 22685906

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 255     aggcggccggcggccatagaa 275
               |||||||||||||||||||||
Sbjct: 6809105 aggcggccggcggccatagaa 6809085

>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 255     aggcggccggcggccatagaa 275
               |||||||||||||||||||||
Sbjct: 6812391 aggcggccggcggccatagaa 6812371

>emb|CR693944.2|CNS0FYEC Tetraodon nigroviridis full-length cDNA
          Length = 1033

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 189 cctgctggacaaggccaacggcga 212
           ||||||||| ||||||||||||||
Sbjct: 305 cctgctggagaaggccaacggcga 328

>emb|AL591044.11| Human DNA sequence from clone RP11-396L22 on chromosome 6 Contains two
             CpG islands, complete sequence
          Length = 133561

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 3     aacagataaaaataagaaga 22
             ||||||||||||||||||||
Sbjct: 73830 aacagataaaaataagaaga 73811



 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 3     aacagataaaaataagaaga 22
             ||||||||||||||||||||
Sbjct: 41824 aacagataaaaataagaaga 41843

>gb|AC147640.3| Mus musculus BAC clone RP23-131P20 from chromosome 10, complete sequence
          Length = 217527

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 109    atcaaaactcttgaacctta 128
              ||||||||||||||||||||
Sbjct: 191899 atcaaaactcttgaacctta 191918

>gb|AE005081.1| Halobacterium sp. NRC-1 section 112 of 170 of the complete genome
          Length = 19293

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 190   ctgctggacaaggccaacggcgacgtaacgct 221
             ||||||| ||||||||||||| |||| |||||
Sbjct: 14670 ctgctgggcaaggccaacggctacgtcacgct 14701

>emb|CR974423.21| Mouse DNA sequence from clone RP23-182F9 on chromosome 12, complete
              sequence
          Length = 238441

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 25     atgaatcaggaagcataaat 44
              ||||||||||||||||||||
Sbjct: 181810 atgaatcaggaagcataaat 181791

>gb|DQ174019.1| Micromesistius poutassou isolate 54 cytochrome oxidase subunit I
           (coxI) gene, partial cds; mitochondrial
          Length = 372

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 235 atggccatcggccttctcgg 254
           ||||||||||||||||||||
Sbjct: 106 atggccatcggccttctcgg 125

>gb|DQ174018.1| Micromesistius poutassou cytochrome oxidase subunit I (coxI) gene,
           partial cds; mitochondrial
          Length = 390

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 235 atggccatcggccttctcgg 254
           ||||||||||||||||||||
Sbjct: 115 atggccatcggccttctcgg 134


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,701,902
Number of Sequences: 3902068
Number of extensions: 2701902
Number of successful extensions: 58018
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 57884
Number of HSP's gapped (non-prelim): 134
length of query: 326
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 304
effective length of database: 17,147,199,772
effective search space: 5212748730688
effective search space used: 5212748730688
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)