| Clone Name | rbaal16h14 |
|---|---|
| Clone Library Name | barley_pub |
>VDAC_MAIZE (P42057) Outer plastidial membrane protein porin (Voltage-dependent| anion-selective channel protein) (VDAC) Length = 277 Score = 360 bits (924), Expect = 2e-99 Identities = 180/205 (87%), Positives = 190/205 (92%) Frame = -2 Query: 689 NSESDLLTTFTVDEFATPGLKSILSLVVPDQRSGKLELQYLHEFASVNASVGLNPSPMVN 510 NSESDLLTT TVDEF TPGLKSI++LVVPDQRSGKLE QYLHE+A VNASVGLN +PMVN Sbjct: 72 NSESDLLTTITVDEFGTPGLKSIINLVVPDQRSGKLEFQYLHEYAGVNASVGLNSNPMVN 131 Query: 509 LSGVFGSKELSVGVDVSFDTATSNFTKYNAALSLAYPDLIASLHLNNHGDTLTASYYHLV 330 LSG FGSK LSVGVDVSFDTATS+FTKYNAALSL PDLIASLHLNNHGDTL ASYYHLV Sbjct: 132 LSGAFGSKALSVGVDVSFDTATSDFTKYNAALSLTSPDLIASLHLNNHGDTLVASYYHLV 191 Query: 329 KSHSSTAVGAELSHNFPRNESTLIFGSQHSLDPHTSVKARFNNYGMASALVQHEWRPKSL 150 K+HS TAVGAELSH+ RNESTLIFGSQHSLDPHT++K RFNNYGMASALVQHEWRPKS Sbjct: 192 KNHSGTAVGAELSHSMSRNESTLIFGSQHSLDPHTTIKTRFNNYGMASALVQHEWRPKSF 251 Query: 149 VTISGEVDTKAIEKSTKVGLSLVLK 75 VTISG+VDTKAIEKSTKVGLSLVLK Sbjct: 252 VTISGDVDTKAIEKSTKVGLSLVLK 276
>VDAC1_ORYSA (Q6K548) Outer mitochondrial membrane protein porin| (Voltage-dependent anion-selective channel protein) (VDAC) Length = 273 Score = 284 bits (726), Expect = 2e-76 Identities = 144/206 (69%), Positives = 174/206 (84%) Frame = -2 Query: 689 NSESDLLTTFTVDEFATPGLKSILSLVVPDQRSGKLELQYLHEFASVNASVGLNPSPMVN 510 NS+S+++TT TVDE TPGLKSILS VPDQRSGK ELQY H++A V+AS+GL SP+VN Sbjct: 70 NSDSNVVTTVTVDEL-TPGLKSILSFAVPDQRSGKFELQYSHDYAGVSASIGLTASPVVN 128 Query: 509 LSGVFGSKELSVGVDVSFDTATSNFTKYNAALSLAYPDLIASLHLNNHGDTLTASYYHLV 330 LS VFG+K L+VG DVS DTAT N TKYNA LS + DLIASL+LNN GD+LTASYYH+V Sbjct: 129 LSSVFGTKALAVGADVSLDTATGNLTKYNAGLSFSNDDLIASLNLNNKGDSLTASYYHIV 188 Query: 329 KSHSSTAVGAELSHNFPRNESTLIFGSQHSLDPHTSVKARFNNYGMASALVQHEWRPKSL 150 +HS+TAVGAEL+H+F NE++L FG+QH+LDP T VKARFNN G ASAL+QHEWRPKS+ Sbjct: 189 -NHSATAVGAELTHSFSSNENSLTFGTQHTLDPLTVVKARFNNSGKASALLQHEWRPKSV 247 Query: 149 VTISGEVDTKAIEKSTKVGLSLVLKP 72 TIS EVDTKAI+KS+KVG+++ LKP Sbjct: 248 WTISAEVDTKAIDKSSKVGIAVALKP 273
>VDAC1_WHEAT (P46274) Outer mitochondrial membrane protein porin| (Voltage-dependent anion-selective channel protein) (VDAC) Length = 275 Score = 278 bits (711), Expect = 1e-74 Identities = 138/206 (66%), Positives = 169/206 (82%) Frame = -2 Query: 689 NSESDLLTTFTVDEFATPGLKSILSLVVPDQRSGKLELQYLHEFASVNASVGLNPSPMVN 510 NS S+++TT T D+ A PGLK+ILS VPDQ+SGK+ELQYLH++A +NAS+GL +P+VN Sbjct: 71 NSASNVITTITADDLAAPGLKTILSFAVPDQKSGKVELQYLHDYAGINASIGLTANPVVN 130 Query: 509 LSGVFGSKELSVGVDVSFDTATSNFTKYNAALSLAYPDLIASLHLNNHGDTLTASYYHLV 330 LSG FG+ L+VG DVS DTAT NF KYNAALS DLIASL+LNN GD+LTASYYH+V Sbjct: 131 LSGAFGTSALAVGADVSLDTATKNFAKYNAALSYTNQDLIASLNLNNKGDSLTASYYHIV 190 Query: 329 KSHSSTAVGAELSHNFPRNESTLIFGSQHSLDPHTSVKARFNNYGMASALVQHEWRPKSL 150 + S TAVGAEL+H+F NE++L FG+QH+LDP T VKAR NN G ASAL+QHE+ PKSL Sbjct: 191 EK-SGTAVGAELTHSFSSNENSLTFGTQHTLDPLTLVKARINNSGKASALIQHEFMPKSL 249 Query: 149 VTISGEVDTKAIEKSTKVGLSLVLKP 72 TIS EVDTKAIEKS+KVG+++ LKP Sbjct: 250 CTISAEVDTKAIEKSSKVGIAIALKP 275
>VDAC2_SOLTU (P42056) 36 kDa outer mitochondrial membrane protein porin| (Voltage-dependent anion-selective channel protein) (VDAC) (POM 36) Length = 275 Score = 271 bits (693), Expect = 1e-72 Identities = 135/206 (65%), Positives = 168/206 (81%) Frame = -2 Query: 689 NSESDLLTTFTVDEFATPGLKSILSLVVPDQRSGKLELQYLHEFASVNASVGLNPSPMVN 510 ++ S++ TT TVDE A PGLK+I S VVPDQ+SGK+ELQYLHE+A +N S+GL SP+VN Sbjct: 71 DTNSNVYTTITVDEPA-PGLKTIFSFVVPDQKSGKVELQYLHEYAGINTSIGLTASPLVN 129 Query: 509 LSGVFGSKELSVGVDVSFDTATSNFTKYNAALSLAYPDLIASLHLNNHGDTLTASYYHLV 330 SGV G+ +++G D+SFDTAT NFTK NA LS + DLIASL LN+ GDT++ASYYH V Sbjct: 130 FSGVAGNNTVALGTDLSFDTATGNFTKCNAGLSFSSSDLIASLALNDKGDTVSASYYHTV 189 Query: 329 KSHSSTAVGAELSHNFPRNESTLIFGSQHSLDPHTSVKARFNNYGMASALVQHEWRPKSL 150 K ++TAVGAEL+H+F NE+TL G+QH LDP T+VKAR N+YG ASAL+QHEWRPKSL Sbjct: 190 KPVTNTAVGAELTHSFSSNENTLTIGTQHLLDPLTTVKARVNSYGKASALIQHEWRPKSL 249 Query: 149 VTISGEVDTKAIEKSTKVGLSLVLKP 72 TISGEVDT+AIEKS K+GL++ LKP Sbjct: 250 FTISGEVDTRAIEKSAKIGLAVALKP 275
>VDAC1_SOLTU (P42055) 34 kDa outer mitochondrial membrane protein porin| (Voltage-dependent anion-selective channel protein) (VDAC) (POM 34) Length = 275 Score = 261 bits (667), Expect = 1e-69 Identities = 130/206 (63%), Positives = 161/206 (78%) Frame = -2 Query: 689 NSESDLLTTFTVDEFATPGLKSILSLVVPDQRSGKLELQYLHEFASVNASVGLNPSPMVN 510 ++ S+L TT TVDE A PGLK+ILS VPDQRSGKLE+QYLH++A + SVGL +P+VN Sbjct: 71 DTNSNLFTTITVDE-AAPGLKTILSFRVPDQRSGKLEVQYLHDYAGICTSVGLTANPIVN 129 Query: 509 LSGVFGSKELSVGVDVSFDTATSNFTKYNAALSLAYPDLIASLHLNNHGDTLTASYYHLV 330 SGV G+ +++G DVSFDT T +FTK NA LS DL+ASL+LNN GD LTASYYH V Sbjct: 130 FSGVVGTNIIALGTDVSFDTKTGDFTKCNAGLSFTNADLVASLNLNNKGDNLTASYYHTV 189 Query: 329 KSHSSTAVGAELSHNFPRNESTLIFGSQHSLDPHTSVKARFNNYGMASALVQHEWRPKSL 150 +STAVGAE++H+F NE+ + G+QH LDP TSVKAR NN+G ASAL+QHEWRPKSL Sbjct: 190 SPLTSTAVGAEVNHSFSTNENIITVGTQHRLDPLTSVKARINNFGKASALLQHEWRPKSL 249 Query: 149 VTISGEVDTKAIEKSTKVGLSLVLKP 72 T+SGEVDTK+++K K GL+L LKP Sbjct: 250 FTVSGEVDTKSVDKGAKFGLALALKP 275
>VDAC1_ARATH (Q9SRH5) Outer mitochondrial membrane protein porin 1| (Voltage-dependent anion-selective channel protein 1) (VDAC 1) Length = 275 Score = 252 bits (643), Expect = 9e-67 Identities = 129/205 (62%), Positives = 155/205 (75%) Frame = -2 Query: 686 SESDLLTTFTVDEFATPGLKSILSLVVPDQRSGKLELQYLHEFASVNASVGLNPSPMVNL 507 ++S L T TVDE A PGL+SI S VPDQ SGK+ELQYLHE+A ++ S+GL +P VN Sbjct: 72 TDSTFLITATVDE-AAPGLRSIFSFKVPDQNSGKVELQYLHEYAGISTSMGLTQNPTVNF 130 Query: 506 SGVFGSKELSVGVDVSFDTATSNFTKYNAALSLAYPDLIASLHLNNHGDTLTASYYHLVK 327 SGV GS L+VG DVSFDT + NFTK NA LS DLIASL +N+ GD L ASYYH+V Sbjct: 131 SGVIGSNVLAVGTDVSFDTKSGNFTKINAGLSFTKEDLIASLTVNDKGDLLNASYYHIVN 190 Query: 326 SHSSTAVGAELSHNFPRNESTLIFGSQHSLDPHTSVKARFNNYGMASALVQHEWRPKSLV 147 +TAVGAE+SH +ST+ G+QHSLDP TSVKAR N+ G+ASAL+QHEW+PKS Sbjct: 191 PLFNTAVGAEVSHKLSSKDSTITVGTQHSLDPLTSVKARVNSAGIASALIQHEWKPKSFF 250 Query: 146 TISGEVDTKAIEKSTKVGLSLVLKP 72 TISGEVDTK+I+KS KVGL+L LKP Sbjct: 251 TISGEVDTKSIDKSAKVGLALALKP 275
>VDAC_PEA (P42054) Outer plastidial membrane protein porin (Voltage-dependent| anion-selective channel protein) (VDAC) Length = 275 Score = 241 bits (614), Expect = 2e-63 Identities = 121/206 (58%), Positives = 152/206 (73%) Frame = -2 Query: 689 NSESDLLTTFTVDEFATPGLKSILSLVVPDQRSGKLELQYLHEFASVNASVGLNPSPMVN 510 ++ S+L TT TV+E A PG+K+ILS VP+Q SGK+ELQYLHE+A +++SVGL +P+VN Sbjct: 71 DTNSNLFTTITVNEPA-PGVKAILSFKVPEQTSGKVELQYLHEYAGISSSVGLKANPIVN 129 Query: 509 LSGVFGSKELSVGVDVSFDTATSNFTKYNAALSLAYPDLIASLHLNNHGDTLTASYYHLV 330 S V G+ L+ G D+SFDT TK NAA++ DLI SL LN GD L+ASYYH + Sbjct: 130 FSSVIGTNALAFGADISFDTKLGELTKSNAAVNFVKDDLIGSLTLNEKGDLLSASYYHAI 189 Query: 329 KSHSSTAVGAELSHNFPRNESTLIFGSQHSLDPHTSVKARFNNYGMASALVQHEWRPKSL 150 S+TAVG ++SH F E+T G+QH+LDP T+VK R N G ASAL+QHEWRPKSL Sbjct: 190 NPLSNTAVGVDISHRFSTKENTFTLGTQHALDPLTTVKGRVTNSGKASALIQHEWRPKSL 249 Query: 149 VTISGEVDTKAIEKSTKVGLSLVLKP 72 +TIS EVDTKAIEKS K+GLSL LKP Sbjct: 250 ITISSEVDTKAIEKSAKIGLSLALKP 275
>VDAC2_ARATH (Q9SMX3) Outer mitochondrial membrane protein porin 2| (Voltage-dependent anion-selective channel protein 2) (VDAC 2) Length = 273 Score = 225 bits (573), Expect = 1e-58 Identities = 112/206 (54%), Positives = 150/206 (72%) Frame = -2 Query: 689 NSESDLLTTFTVDEFATPGLKSILSLVVPDQRSGKLELQYLHEFASVNASVGLNPSPMVN 510 +++S LLTT T DE A PGLK I+ +PD +SGK E+QY H++A ++ SVG +P+VN Sbjct: 71 STDSSLLTTLTFDEPA-PGLKVIVQAKLPDHKSGKAEVQYFHDYAGISTSVGFTATPIVN 129 Query: 509 LSGVFGSKELSVGVDVSFDTATSNFTKYNAALSLAYPDLIASLHLNNHGDTLTASYYHLV 330 SGV G+ LS+G DV+++T + NF +NA + DL ASL LN+ G+ L ASYY +V Sbjct: 130 FSGVVGTNGLSLGTDVAYNTESGNFKHFNAGFNFTKDDLTASLILNDKGEKLNASYYQIV 189 Query: 329 KSHSSTAVGAELSHNFPRNESTLIFGSQHSLDPHTSVKARFNNYGMASALVQHEWRPKSL 150 ST VGAE+SHNF E+ + G+QH+LDP T+VKAR NN G+A+AL+QHEWRPKS Sbjct: 190 SP--STVVGAEISHNFTTKENAITVGTQHALDPLTTVKARVNNAGVANALIQHEWRPKSF 247 Query: 149 VTISGEVDTKAIEKSTKVGLSLVLKP 72 T+SGEVD+KAI+KS KVG++L LKP Sbjct: 248 FTVSGEVDSKAIDKSAKVGIALALKP 273
>VDAC_CAEEL (Q21752) Probable voltage-dependent anion-selective channel| Length = 283 Score = 71.2 bits (173), Expect = 3e-12 Identities = 58/209 (27%), Positives = 96/209 (45%), Gaps = 3/209 (1%) Frame = -2 Query: 689 NSESDLLTTFTVDEFATPGLKSIL-SLVVPD--QRSGKLELQYLHEFASVNASVGLNPSP 519 N+E+ L T V+E GLK L SL P +RSGK++L + A V A VG+ +P Sbjct: 77 NTENQLGTVIEVNEQFGRGLKVTLDSLYAPHAGKRSGKVKLDWALPTARVTADVGVTSAP 136 Query: 518 MVNLSGVFGSKELSVGVDVSFDTATSNFTKYNAALSLAYPDLIASLHLNNHGDTLTASYY 339 ++N +GVF +G +FD++++ + A + P + N D AS Y Sbjct: 137 VINAAGVFSRDGWLIGAAATFDSSSNKLAATSLAFGHSTPQYTLHSFVINSTD-FGASLY 195 Query: 338 HLVKSHSSTAVGAELSHNFPRNESTLIFGSQHSLDPHTSVKARFNNYGMASALVQHEWRP 159 H K S+ VG +L N + ++++ +V+A+ N+ + H P Sbjct: 196 H--KVASNVEVGTQLGWKVGGNGADYALATKYAPSRDLTVRAKVNSSSQVAVAATHSLSP 253 Query: 158 KSLVTISGEVDTKAIEKSTKVGLSLVLKP 72 +T+S + + A + K GL L P Sbjct: 254 ALKLTLSTQFNL-AANDAHKFGLGLEFDP 281
>VDAC_DROME (Q94920) Voltage-dependent anion-selective channel (Porin) (DmVDAC)| Length = 281 Score = 69.7 bits (169), Expect = 8e-12 Identities = 56/210 (26%), Positives = 93/210 (44%), Gaps = 5/210 (2%) Frame = -2 Query: 689 NSESDLLTTFTVDEFATPGLKSILSLVVPDQ---RSGKLELQYLHEFASVNASVGLN-PS 522 N+++ L T V + GLK L Q ++GK ++ Y HE ++ V ++ Sbjct: 74 NTDNTLFTEVAVQDQLLEGLKLSLEGNFAPQSGNKNGKFKVAYGHENVKADSDVNIDLKG 133 Query: 521 PMVNLSGVFGSKELSVGVDVSFDTATSNFTKYNAALSLAYPDLIASLHLNNHGDTLTASY 342 P++N S V G + G +FDT S T N AL D + +N+ G + S Sbjct: 134 PLINASAVLGYQGWLAGYQTAFDTQQSKLTTNNFALGYTTKDFVLHTAVND-GQEFSGSI 192 Query: 341 YHLVKSHSSTAVGAELSHNFPRNESTLIFGSQHSLDPHTSVKARFNNYGMASALVQHEWR 162 + ++ VG +LS + + G+++ LD SV+A+ NN Q + R Sbjct: 193 FQ--RTSDKLDVGVQLSWASGTSNTKFAIGAKYQLDDDASVRAKVNNASQVGLGYQQKLR 250 Query: 161 PKSLVTISGEVDTKAIEK-STKVGLSLVLK 75 +T+S VD K K+G+ L L+ Sbjct: 251 DGVTLTLSTLVDGKNFNAGGHKIGVGLELE 280
>VDAC2_MELGA (P82013) Voltage-dependent anion-selective channel protein 2| (VDAC-2) (Outer mitochondrial membrane protein porin 2) Length = 282 Score = 67.0 bits (162), Expect = 5e-11 Identities = 57/211 (27%), Positives = 93/211 (44%), Gaps = 6/211 (2%) Frame = -2 Query: 689 NSESDLLTTFTVDEFATPGLKSILSLVVPD---QRSGKLELQYLHEFASVNASVGLN-PS 522 N+++ L T +++ GLK ++SGK++ Y E ++ V + Sbjct: 75 NTDNTLGTEIAIEDQIAKGLKLTFDTTFSPNTGKKSGKIKSAYKRECLNLGCDVDFDFAG 134 Query: 521 PMVNLSGVFGSKELSVGVDVSFDTATSNFTKYNAALSLAYPDLIASLHLN-NHGDTLTAS 345 P ++ S VFG + G ++FD+A S T+ N S+ Y LH N N G S Sbjct: 135 PAIHGSAVFGYEGWLAGYQMTFDSAKSKLTRNN--FSVGYKTGDFQLHTNVNDGSEFGGS 192 Query: 344 YYHLVKSHSSTAVGAELSHNFPRNESTLIFGSQHSLDPHTSVKARFNNYGMASALVQHEW 165 Y V + TAV L+ N + +++ LD S+ A+ NN + Sbjct: 193 IYQKVSDNLETAV--NLAWTAGSNSTRFGIAAKYKLDSTASISAKVNNSSLVGVGYTQTL 250 Query: 164 RPKSLVTISGEVDTKAIEK-STKVGLSLVLK 75 RP +T+S +D K+I K+GL L L+ Sbjct: 251 RPGVKLTLSALIDGKSINAGGHKLGLGLELE 281
>VDAC2_PIG (Q9MZ15) Voltage-dependent anion-selective channel protein 2| Length = 294 Score = 66.6 bits (161), Expect = 7e-11 Identities = 58/211 (27%), Positives = 94/211 (44%), Gaps = 6/211 (2%) Frame = -2 Query: 689 NSESDLLTTFTVDEFATPGLKSILSLVVPD---QRSGKLELQYLHEFASVNASVGLN-PS 522 N+++ L T +++ GLK ++SGK++ Y E ++ V + Sbjct: 87 NTDNTLGTEIAIEDQICQGLKLTFDTTFSPNTGKKSGKIKSSYKRECVNLGCDVDFDFAG 146 Query: 521 PMVNLSGVFGSKELSVGVDVSFDTATSNFTKYNAALSLAYPDLIASLHLN-NHGDTLTAS 345 P ++ S VFG + G ++FD+A S T+ N A+ D LH N N G S Sbjct: 147 PAIHGSAVFGYEGWLAGYQMTFDSAKSKLTRNNFAVGYRTGDF--QLHTNVNDGTEFGGS 204 Query: 344 YYHLVKSHSSTAVGAELSHNFPRNESTLIFGSQHSLDPHTSVKARFNNYGMASALVQHEW 165 Y V T+V L+ N + +++ LDP S+ A+ NN + Sbjct: 205 IYQKVCEDLDTSV--NLAWTSGTNCTRFGIAAKYQLDPTASISAKVNNSSLIGVGYTQTL 262 Query: 164 RPKSLVTISGEVDTKAIEK-STKVGLSLVLK 75 RP +T+S VD K+I K+GL+L L+ Sbjct: 263 RPGVKLTLSALVDGKSINAGGHKLGLALELE 293
>VDAC2_RABIT (P68003) Voltage-dependent anion-selective channel protein 2 (Outer| mitochondrial membrane protein porin 2) Length = 294 Score = 66.2 bits (160), Expect = 9e-11 Identities = 58/211 (27%), Positives = 94/211 (44%), Gaps = 6/211 (2%) Frame = -2 Query: 689 NSESDLLTTFTVDEFATPGLKSILSLVVPD---QRSGKLELQYLHEFASVNASVGLN-PS 522 N+++ L T +++ GLK ++SGK++ Y E ++ V + Sbjct: 87 NTDNTLGTEIAIEDQICQGLKLTFDTTFSPNTGKKSGKIKSSYKRECINLGCDVDFDFAG 146 Query: 521 PMVNLSGVFGSKELSVGVDVSFDTATSNFTKYNAALSLAYPDLIASLHLN-NHGDTLTAS 345 P ++ S VFG + G ++FD+A S T+ N A+ D LH N N G S Sbjct: 147 PAIHGSAVFGYEGWLAGYQMTFDSAKSKLTRNNFAVGYRTGDF--QLHTNVNDGTEFGGS 204 Query: 344 YYHLVKSHSSTAVGAELSHNFPRNESTLIFGSQHSLDPHTSVKARFNNYGMASALVQHEW 165 Y V T+V L+ N + +++ LDP S+ A+ NN + Sbjct: 205 IYQKVCEDLDTSV--NLAWTSGTNCTRFGIAAKYQLDPTASISAKVNNSSLIGVGYTQTL 262 Query: 164 RPKSLVTISGEVDTKAIEK-STKVGLSLVLK 75 RP +T+S VD K+I K+GL+L L+ Sbjct: 263 RPGVKLTLSALVDGKSINAGGHKLGLALELE 293
>VDAC2_BOVIN (P68002) Voltage-dependent anion-selective channel protein 2 (Outer| mitochondrial membrane protein porin 2) Length = 294 Score = 66.2 bits (160), Expect = 9e-11 Identities = 58/211 (27%), Positives = 94/211 (44%), Gaps = 6/211 (2%) Frame = -2 Query: 689 NSESDLLTTFTVDEFATPGLKSILSLVVPD---QRSGKLELQYLHEFASVNASVGLN-PS 522 N+++ L T +++ GLK ++SGK++ Y E ++ V + Sbjct: 87 NTDNTLGTEIAIEDQICQGLKLTFDTTFSPNTGKKSGKIKSSYKRECINLGCDVDFDFAG 146 Query: 521 PMVNLSGVFGSKELSVGVDVSFDTATSNFTKYNAALSLAYPDLIASLHLN-NHGDTLTAS 345 P ++ S VFG + G ++FD+A S T+ N A+ D LH N N G S Sbjct: 147 PAIHGSAVFGYEGWLAGYQMTFDSAKSKLTRNNFAVGYRTGDF--QLHTNVNDGTEFGGS 204 Query: 344 YYHLVKSHSSTAVGAELSHNFPRNESTLIFGSQHSLDPHTSVKARFNNYGMASALVQHEW 165 Y V T+V L+ N + +++ LDP S+ A+ NN + Sbjct: 205 IYQKVCEDLDTSV--NLAWTSGTNCTRFGIAAKYQLDPTASISAKVNNSSLIGVGYTQTL 262 Query: 164 RPKSLVTISGEVDTKAIEK-STKVGLSLVLK 75 RP +T+S VD K+I K+GL+L L+ Sbjct: 263 RPGVKLTLSALVDGKSINAGGHKLGLALELE 293
>VDAC2_RAT (P81155) Voltage-dependent anion-selective channel protein 2| (VDAC-2) (Outer mitochondrial membrane protein porin 2) (B36-VDAC) Length = 295 Score = 65.1 bits (157), Expect = 2e-10 Identities = 57/211 (27%), Positives = 94/211 (44%), Gaps = 6/211 (2%) Frame = -2 Query: 689 NSESDLLTTFTVDEFATPGLKSILSLVVPD---QRSGKLELQYLHEFASVNASVGLN-PS 522 N+++ L T +++ GLK ++SGK++ Y E ++ V + Sbjct: 88 NTDNTLGTEIAIEDQICQGLKLTFDTTFSPNTGKKSGKIKSAYKRECINLGCDVDFDFAG 147 Query: 521 PMVNLSGVFGSKELSVGVDVSFDTATSNFTKYNAALSLAYPDLIASLHLN-NHGDTLTAS 345 P ++ S VFG + G ++FD+A S T+ N A+ D LH N N+G S Sbjct: 148 PAIHGSAVFGYEGWLAGYQMTFDSAKSKLTRSNFAVGYRTGDF--QLHTNVNNGTEFGGS 205 Query: 344 YYHLVKSHSSTAVGAELSHNFPRNESTLIFGSQHSLDPHTSVKARFNNYGMASALVQHEW 165 Y V T+V L+ N + +++ LDP S+ A+ NN + Sbjct: 206 IYQKVCEDFDTSV--NLAWTSGTNCTRFGIAAKYQLDPTASISAKVNNSSLIGVGYTQTL 263 Query: 164 RPKSLVTISGEVDTKAIEK-STKVGLSLVLK 75 RP +T+S VD K+ K+GL+L L+ Sbjct: 264 RPGVKLTLSALVDGKSFNAGGHKLGLALELE 294
>VDAC2_MOUSE (Q60930) Voltage-dependent anion-selective channel protein 2| (VDAC-2) (mVDAC2) (mVDAC6) (Outer mitochondrial membrane protein porin 2) Length = 295 Score = 65.1 bits (157), Expect = 2e-10 Identities = 57/211 (27%), Positives = 94/211 (44%), Gaps = 6/211 (2%) Frame = -2 Query: 689 NSESDLLTTFTVDEFATPGLKSILSLVVPD---QRSGKLELQYLHEFASVNASVGLN-PS 522 N+++ L T +++ GLK ++SGK++ Y E ++ V + Sbjct: 88 NTDNTLGTEIAIEDQICQGLKLTFDTTFSPNTGKKSGKIKSAYKRECINLGCDVDFDFAG 147 Query: 521 PMVNLSGVFGSKELSVGVDVSFDTATSNFTKYNAALSLAYPDLIASLHLN-NHGDTLTAS 345 P ++ S VFG + G ++FD+A S T+ N A+ D LH N N+G S Sbjct: 148 PAIHGSAVFGYEGWLAGYQMTFDSAKSKLTRSNFAVGYRTGDF--QLHTNVNNGTEFGGS 205 Query: 344 YYHLVKSHSSTAVGAELSHNFPRNESTLIFGSQHSLDPHTSVKARFNNYGMASALVQHEW 165 Y V T+V L+ N + +++ LDP S+ A+ NN + Sbjct: 206 IYQKVCEDFDTSV--NLAWTSGTNCTRFGIAAKYQLDPTASISAKVNNSSLIGVGYTQTL 263 Query: 164 RPKSLVTISGEVDTKAIEK-STKVGLSLVLK 75 RP +T+S VD K+ K+GL+L L+ Sbjct: 264 RPGVKLTLSALVDGKSFNAGGHKLGLALELE 294
>VDAC3_PIG (Q29380) Voltage-dependent anion-selective channel protein 3| (VDAC-3) (Outer mitochondrial membrane protein porin 3) Length = 283 Score = 64.3 bits (155), Expect = 3e-10 Identities = 57/210 (27%), Positives = 94/210 (44%), Gaps = 5/210 (2%) Frame = -2 Query: 689 NSESDLLTTFTVDEFATPGLKSILSLV-VPD--QRSGKLELQYLHEFASVNASVGLN-PS 522 N+++ L T +++ GLK L + VP+ ++SGKL+ Y E S+ ++V ++ Sbjct: 76 NTDNTLGTEISLENKLAEGLKLTLDTIFVPNTGKKSGKLKASYKRECFSIGSNVDIDFAG 135 Query: 521 PMVNLSGVFGSKELSVGVDVSFDTATSNFTKYNAALSLAYPDLIASLHLNNHGDTLTASY 342 P + V + G +SFDTA S ++ N AL D H+N+ G S Sbjct: 136 PTIYGWAVLALEGWLAGYQMSFDTAKSKLSQNNFALGYKAADFQLHTHVND-GTEFGGSI 194 Query: 341 YHLVKSHSSTAVGAELSHNFPRNESTLIFGSQHSLDPHTSVKARFNNYGMASALVQHEWR 162 Y V T++ L+ N + +++ LD TS+ A+ NN + R Sbjct: 195 YQKVNEKIETSI--NLAWTAGSNNTRFGIAAKYKLDCRTSLSAKVNNASLIGLGYTQTLR 252 Query: 161 PKSLVTISGEVDTKAIEK-STKVGLSLVLK 75 P +T+S +D K KVGL L+ Sbjct: 253 PGVKLTLSALIDGKNFSAGGHKVGLGFELE 282
>VDAC2_HUMAN (P45880) Voltage-dependent anion-selective channel protein 2| (VDAC-2) (hVDAC2) (Outer mitochondrial membrane protein porin 2) Length = 347 Score = 62.8 bits (151), Expect = 1e-09 Identities = 53/197 (26%), Positives = 86/197 (43%), Gaps = 5/197 (2%) Frame = -2 Query: 689 NSESDLLTTFTVDEFATPGLKSILSLVVPD---QRSGKLELQYLHEFASVNASVGLN-PS 522 N+++ L T +++ GLK ++SGK++ Y E ++ V + Sbjct: 102 NTDNTLGTEIAIEDQICQGLKLTFDTTFSPNTGKKSGKIKSSYKRECINLGCDVDFDFAG 161 Query: 521 PMVNLSGVFGSKELSVGVDVSFDTATSNFTKYNAALSLAYPDLIASLHLN-NHGDTLTAS 345 P ++ S VFG + G ++FD+A S T+ N A+ D LH N N G S Sbjct: 162 PAIHGSAVFGYEGWLAGYQMTFDSAKSKLTRNNFAVGYRTGDF--QLHTNVNDGTEFGGS 219 Query: 344 YYHLVKSHSSTAVGAELSHNFPRNESTLIFGSQHSLDPHTSVKARFNNYGMASALVQHEW 165 Y V T+V L+ N + +++ LDP S+ A+ NN + Sbjct: 220 IYQKVCEDLDTSV--NLAWTSGTNCTRFGIAAKYQLDPTASISAKVNNSSLIGVGYTQTL 277 Query: 164 RPKSLVTISGEVDTKAI 114 RP +T+S VD K+I Sbjct: 278 RPGVKLTLSALVDGKSI 294
>VDAC3_RABIT (Q9TT13) Voltage-dependent anion-selective channel protein 3| (VDAC-3) (Outer mitochondrial membrane protein porin 3) Length = 283 Score = 62.8 bits (151), Expect = 1e-09 Identities = 57/210 (27%), Positives = 95/210 (45%), Gaps = 5/210 (2%) Frame = -2 Query: 689 NSESDLLTTFTVDEFATPGLKSILSLV-VPD--QRSGKLELQYLHEFASVNASVGLNPS- 522 N+++ L T +++ GLK L + VP+ ++SGKL+ Y + S+ ++V ++ S Sbjct: 76 NTDNTLGTEISLENKLAEGLKLTLDTIFVPNTGKKSGKLKASYKRDCFSLGSNVDIDFSG 135 Query: 521 PMVNLSGVFGSKELSVGVDVSFDTATSNFTKYNAALSLAYPDLIASLHLNNHGDTLTASY 342 P + V + G +SFDTA S ++ N AL D H+N+ G S Sbjct: 136 PTIYGWAVLAFEGWLAGYQMSFDTAKSKLSQNNFALGYKAADFQLHTHVND-GTEFGGSI 194 Query: 341 YHLVKSHSSTAVGAELSHNFPRNESTLIFGSQHSLDPHTSVKARFNNYGMASALVQHEWR 162 Y V T++ L+ N + +++ LD TS+ A+ NN + R Sbjct: 195 YQKVNEKIETSI--NLAWTAGSNNTRFGIAAKYKLDCRTSLSAKVNNASLIGLGYTQTLR 252 Query: 161 PKSLVTISGEVDTKAIEK-STKVGLSLVLK 75 P +T+S +D K KVGL L+ Sbjct: 253 PGVKLTLSALIDGKNFNAGGHKVGLGFELE 282
>VDAC3_HUMAN (Q9Y277) Voltage-dependent anion-selective channel protein 3| (VDAC-3) (hVDAC3) (Outer mitochondrial membrane protein porin 3) Length = 283 Score = 62.0 bits (149), Expect = 2e-09 Identities = 58/210 (27%), Positives = 94/210 (44%), Gaps = 5/210 (2%) Frame = -2 Query: 689 NSESDLLTTFTVDEFATPGLKSILSLV-VPD--QRSGKLELQYLHEFASVNASVGLNPS- 522 N+++ L T + + GLK L + VP+ ++SGKL+ Y + SV ++V ++ S Sbjct: 76 NTDNTLGTEISWENKLAEGLKLTLDTIFVPNTGKKSGKLKASYKRDCFSVGSNVDIDFSG 135 Query: 521 PMVNLSGVFGSKELSVGVDVSFDTATSNFTKYNAALSLAYPDLIASLHLNNHGDTLTASY 342 P + V + G +SFDTA S ++ N AL D H+N+ G S Sbjct: 136 PTIYGWAVLAFEGWLAGYQMSFDTAKSKLSQNNFALGYKAADFQLHTHVND-GTEFGGSI 194 Query: 341 YHLVKSHSSTAVGAELSHNFPRNESTLIFGSQHSLDPHTSVKARFNNYGMASALVQHEWR 162 Y V T++ L+ N + +++ LD TS+ A+ NN + R Sbjct: 195 YQKVNEKIETSI--NLAWTAGSNNTRFGIAAKYMLDCRTSLSAKVNNASLIGLGYTQTLR 252 Query: 161 PKSLVTISGEVDTKAIEK-STKVGLSLVLK 75 P +T+S +D K KVGL L+ Sbjct: 253 PGVKLTLSALIDGKNFSAGGHKVGLGFELE 282
>VDAC3_PONPY (Q5R7V4) Voltage-dependent anion-selective channel protein 3| (VDAC-3) Length = 284 Score = 62.0 bits (149), Expect = 2e-09 Identities = 58/210 (27%), Positives = 94/210 (44%), Gaps = 5/210 (2%) Frame = -2 Query: 689 NSESDLLTTFTVDEFATPGLKSILSLV-VPD--QRSGKLELQYLHEFASVNASVGLNPS- 522 N+++ L T + + GLK L + VP+ ++SGKL+ Y + SV ++V ++ S Sbjct: 77 NTDNTLGTEISWENKLAEGLKLTLDTIFVPNTGKKSGKLKASYKRDCFSVGSNVDIDFSG 136 Query: 521 PMVNLSGVFGSKELSVGVDVSFDTATSNFTKYNAALSLAYPDLIASLHLNNHGDTLTASY 342 P + V + G +SFDTA S ++ N AL D H+N+ G S Sbjct: 137 PTIYGWAVLAFEGWLAGYQMSFDTAKSKLSQNNFALGYKAADFQLHTHVND-GTEFGGSI 195 Query: 341 YHLVKSHSSTAVGAELSHNFPRNESTLIFGSQHSLDPHTSVKARFNNYGMASALVQHEWR 162 Y V T++ L+ N + +++ LD TS+ A+ NN + R Sbjct: 196 YQKVNEKIETSI--NLAWTAGSNNTRFGIAAKYMLDCRTSLSAKVNNASLIGLGYTQTLR 253 Query: 161 PKSLVTISGEVDTKAIEK-STKVGLSLVLK 75 P +T+S +D K KVGL L+ Sbjct: 254 PGVKLTLSALIDGKNFSAGGHKVGLGFELE 283
>VDAC3_MOUSE (Q60931) Voltage-dependent anion-selective channel protein 3| (VDAC-3) (mVDAC3) (Outer mitochondrial membrane protein porin 3) Length = 283 Score = 61.6 bits (148), Expect = 2e-09 Identities = 57/210 (27%), Positives = 94/210 (44%), Gaps = 5/210 (2%) Frame = -2 Query: 689 NSESDLLTTFTVDEFATPGLKSILSLV-VPD--QRSGKLELQYLHEFASVNASVGLNPS- 522 N+++ L T + + GLK L + VP+ ++SGKL+ Y + S+ ++V ++ S Sbjct: 76 NTDNTLGTEISWENKLAEGLKLTLDTIFVPNTGKKSGKLKASYRRDCFSLGSNVDIDFSG 135 Query: 521 PMVNLSGVFGSKELSVGVDVSFDTATSNFTKYNAALSLAYPDLIASLHLNNHGDTLTASY 342 P + V + G +SFDTA S ++ N AL D H+N+ G S Sbjct: 136 PTIYGWAVLAFEGWLAGYQMSFDTAKSKLSQNNFALGYKAADFQLHTHVND-GTEFGGSI 194 Query: 341 YHLVKSHSSTAVGAELSHNFPRNESTLIFGSQHSLDPHTSVKARFNNYGMASALVQHEWR 162 Y V T++ L+ N + +++ LD TS+ A+ NN + R Sbjct: 195 YQKVNERIETSI--NLAWTAGSNNTRFGIAAKYKLDCRTSLSAKVNNASLIGLGYTQTLR 252 Query: 161 PKSLVTISGEVDTKAIEK-STKVGLSLVLK 75 P +T+S +D K KVGL L+ Sbjct: 253 PGVKLTLSALIDGKNFNAGGHKVGLGFELE 282
>VDAC3_RAT (Q9R1Z0) Voltage-dependent anion-selective channel protein 3| (VDAC-3) (rVDAC3) (Outer mitochondrial membrane protein porin 3) Length = 283 Score = 61.2 bits (147), Expect = 3e-09 Identities = 58/210 (27%), Positives = 94/210 (44%), Gaps = 5/210 (2%) Frame = -2 Query: 689 NSESDLLTTFTVDEFATPGLK-SILSLVVPD--QRSGKLELQYLHEFASVNASVGLNPS- 522 N+++ L T + + GLK ++ ++ VP+ ++SGKL+ Y + SV + V ++ S Sbjct: 76 NTDNTLGTEISWENKLAEGLKLTVDTIFVPNTGKKSGKLKASYRRDCFSVGSKVDIDFSG 135 Query: 521 PMVNLSGVFGSKELSVGVDVSFDTATSNFTKYNAALSLAYPDLIASLHLNNHGDTLTASY 342 P + V + G +SFDTA S + N AL D H+N+ G S Sbjct: 136 PTIYGWAVLAFEGWLAGYQMSFDTAKSKLCQNNFALGYKAEDFQLHTHVND-GTEFGGSI 194 Query: 341 YHLVKSHSSTAVGAELSHNFPRNESTLIFGSQHSLDPHTSVKARFNNYGMASALVQHEWR 162 Y V T++ L+ N + +++ LD TS+ A+ NN + R Sbjct: 195 YQRVNEKIETSI--NLAWTAGSNNTRFGIAAKYRLDCRTSLSAKVNNASLIGLGYTQSLR 252 Query: 161 PKSLVTISGEVDTKAIEK-STKVGLSLVLK 75 P +T+S VD K KVGL L+ Sbjct: 253 PGVKLTLSALVDGKNFNAGGHKVGLGFELE 282
>VDAC3_BOVIN (Q9MZ13) Voltage-dependent anion-selective channel protein 3| (VDAC-3) (hVDAC3) (Outer mitochondrial membrane protein porin 3) Length = 283 Score = 61.2 bits (147), Expect = 3e-09 Identities = 57/210 (27%), Positives = 94/210 (44%), Gaps = 5/210 (2%) Frame = -2 Query: 689 NSESDLLTTFTVDEFATPGLKSILSLV-VPD--QRSGKLELQYLHEFASVNASVGLNPS- 522 N+++ L T + + GLK L + VP+ ++SGKL+ Y + S+ ++V ++ S Sbjct: 76 NTDNTLGTEISWENKLAEGLKLTLDTIFVPNTGKKSGKLKASYKRDCFSLGSNVDIDFSG 135 Query: 521 PMVNLSGVFGSKELSVGVDVSFDTATSNFTKYNAALSLAYPDLIASLHLNNHGDTLTASY 342 P + V + G +SFDTA S ++ N AL D H+N+ G S Sbjct: 136 PTIYGWAVLAFEGWLAGYQMSFDTAKSKLSQNNFALGYKAADFQLHTHVND-GTEFGGSI 194 Query: 341 YHLVKSHSSTAVGAELSHNFPRNESTLIFGSQHSLDPHTSVKARFNNYGMASALVQHEWR 162 Y V T++ L+ N + +++ LD TS+ A+ NN + R Sbjct: 195 YQKVNEKIETSI--NLAWTAGSNNTRFGIAAKYKLDCRTSLSAKVNNASLIGLGYTQTLR 252 Query: 161 PKSLVTISGEVDTKAIEK-STKVGLSLVLK 75 P +T+S +D K KVGL L+ Sbjct: 253 PGVKLTLSALIDGKNFNAGGHKVGLGFELE 282
>VDAC_NEUCR (P07144) Outer mitochondrial membrane protein porin| Length = 283 Score = 59.3 bits (142), Expect = 1e-08 Identities = 51/210 (24%), Positives = 91/210 (43%), Gaps = 5/210 (2%) Frame = -2 Query: 689 NSESDLLTTFTVDEFATPGLKS--ILS-LVVPDQRSGKLELQYLHEFASVNASVGLNPSP 519 N+ + L T + + GLK+ I S L + R K L + A L P Sbjct: 75 NTANALETKVEMADNLAKGLKAEGIFSFLPATNARGAKFNLHFKQSNFHGRAFFDLLKGP 134 Query: 518 MVNLSGVFGSKELSVGVDVSFDTATSNFTKYNAALSLAYPDLIASLHLNNHGDTLTASYY 339 N+ + G + G +D + T Y+AA+ P A++ ++ +ASYY Sbjct: 135 TANIDAIVGHEGFLAGASAGYDVQKAAITGYSAAVGYHAPTYSAAITATDNLSVFSASYY 194 Query: 338 HLVKSHSSTAVGAELSHNFPR-NESTLIFGSQHSLDPHTSVKARFNNYGMASALVQHEWR 162 H K +S G++ + N N L +++ +DP + VK + N+ G+A+ R Sbjct: 195 H--KVNSQVEAGSKATWNSKTGNTVGLEVATKYRIDPVSFVKGKINDRGVAAIAYNVLLR 252 Query: 161 PKSLVTISGEVDTKAIEKST-KVGLSLVLK 75 + + DT+ ++++T KVG S + Sbjct: 253 EGVTLGVGASFDTQKLDQATHKVGTSFTFE 282
>VDAC_SCHPO (Q9P544) Probable outer mitochondrial membrane protein porin| Length = 282 Score = 58.9 bits (141), Expect = 1e-08 Identities = 51/194 (26%), Positives = 82/194 (42%), Gaps = 4/194 (2%) Frame = -2 Query: 653 DEFATPGLKSILSLVVPDQRSGK---LELQYLHEFASVNASVGLNPSPMVNLSGVFGSKE 483 ++FA PGL ++ + K L L++ H +ASV + V G + Sbjct: 87 EQFA-PGLHLNVNTTFSPATAAKTAILNLEHQHPLIHTHASVNALERKFLGDFTV-GHEG 144 Query: 482 LSVGVDVSFDTATSNFTKYNAALSLAYPDLIASLHLNNHGDTLTASYYHLVKSHSSTAVG 303 G + +D N + Y A + L +L +N+ ASYYH V S Sbjct: 145 FLAGAEFGYDVQKGNVSNYAATIGYLASPLSVALQASNNLSVFRASYYHRVSSDVEAGGN 204 Query: 302 AELSHNFPRNESTLIFGSQHSLDPHTSVKARFNNYGMASALVQHEWRPKSLVTISGEVDT 123 N TL S+++LD T VK + N+ G+A+ RP V + ++DT Sbjct: 205 VTWDAASTANAITLELASKYALDKDTFVKGKINSAGVATLSYFQTVRPGVTVGLGLQLDT 264 Query: 122 KAI-EKSTKVGLSL 84 + + + + K GLSL Sbjct: 265 QRLGQPAHKAGLSL 278
>VDAC1_YEAST (P04840) Outer mitochondrial membrane protein porin 1| (Voltage-dependent anion-selective channel protein 1) (VDAC 1) Length = 282 Score = 46.2 bits (108), Expect = 9e-05 Identities = 47/195 (24%), Positives = 80/195 (41%), Gaps = 6/195 (3%) Frame = -2 Query: 650 EFA--TPGLKS--ILSLVVPDQRSGKLELQYLHEFASVNASVGLN-PSPMVNLSGVFGSK 486 EFA TPGLK+ I SL +S L + F + + L SP + Sbjct: 85 EFANLTPGLKNELITSLTPGVAKSAVLNTTFTQPFFTARGAFDLCLKSPTFVGDLTMAHE 144 Query: 485 ELSVGVDVSFDTATSNFTKYNAALSLAYPDLIASLHLNNHGDTLTASYYHLVKSHSSTAV 306 + G + +D + + ++Y ALS D LNN T T ++ V + Sbjct: 145 GIVGGAEFGYDISAGSISRYAMALSYFAKDYSLGATLNNEQIT-TVDFFQNVNAFLQVGA 203 Query: 305 GAELSHNFPRNESTLIFGSQHSLDPHTSVKARFNNYGMASALVQHEWRPKSLVTISGEVD 126 A ++ P + + F +++ D + VKA+ ++ G+ + + RP + + D Sbjct: 204 KATMNCKLPNSNVNIEFATRYLPDASSQVKAKVSDSGIVTLAYKQLLRPGVTLGVGSSFD 263 Query: 125 T-KAIEKSTKVGLSL 84 K E K+G SL Sbjct: 264 ALKLSEPVHKLGWSL 278
>VDAC2_YEAST (P40478) Outer mitochondrial membrane protein porin 2| (Voltage-dependent anion-selective channel protein 2) (VDAC 2) Length = 281 Score = 36.6 bits (83), Expect = 0.074 Identities = 38/155 (24%), Positives = 67/155 (43%), Gaps = 4/155 (2%) Frame = -2 Query: 638 PGLKSILSLVVPDQ--RSGKLELQYLHEFASVNASVG-LNPSPMVNLSGVFGSKELSVGV 468 PG K ++ + Q ++ K L Y + + S+ L P V S G + G Sbjct: 92 PGWKGDVNAFLTPQSIKNAKFNLSYAQKSFAARTSIDILQPKDFVG-SVTLGHRGFVGGT 150 Query: 467 DVSFDTATSNFTKYNAALSLAYPDLIASLHLN-NHGDTLTASYYHLVKSHSSTAVGAELS 291 D+++DTA +Y A+S+ Y S L+ N+ TAS++ V + A L Sbjct: 151 DIAYDTAAGLCARY--AMSIGYLAREYSFILSTNNRQCATASFFQNVNRYLQVGTKATLQ 208 Query: 290 HNFPRNESTLIFGSQHSLDPHTSVKARFNNYGMAS 186 N + F +++ D + VKA+ + G+ + Sbjct: 209 SKTSSN-MNIEFVTRYVPDSISQVKAKIADSGLTT 242
>PCSK5_MOUSE (Q04592) Proprotein convertase subtilisin/kexin type 5 precursor (EC| 3.4.21.-) (Proprotein convertase PC5) (Subtilisin/kexin-like protease PC5) (PC6) (Subtilisin-like proprotein convertase 6) (SPC6) Length = 1877 Score = 33.5 bits (75), Expect = 0.63 Identities = 27/84 (32%), Positives = 34/84 (40%) Frame = +2 Query: 179 QGHWPCHNC*SVPSHWCAGPMSAAIQISMCSRSLGSCGTALLQQQCLNVTLLSGSKTQSR 358 QG WP SV S C CS SC A L QQCL+ + + R Sbjct: 1244 QGTWP-----SVTSGSC----------EKCSEDCVSCSGADLCQQCLSQPDNTLLLHEGR 1288 Query: 359 CHHDCSGGVKQ*DPDMRGLKQHCT 430 C+H C G D G+ +HC+ Sbjct: 1289 CYHSCPEGFYAKD----GVCEHCS 1308
>DPA5_BPR69 (O80164) DNA polymerase processivity component (DNA polymerase| accessory protein 45) (Gp45) Length = 228 Score = 33.1 bits (74), Expect = 0.82 Identities = 21/82 (25%), Positives = 39/82 (47%), Gaps = 5/82 (6%) Frame = -2 Query: 569 LHEFASVNASVGLNPSPMVNLSGVFGSK--ELSVGVDVSFDTATSNFTKYNAALSLAYPD 396 L FAS+N+ + L+ + V G+ E ++ ++ FD A + + + LSL D Sbjct: 11 LKNFASINSGILLSQGKFIMTRAVNGTTYAEANISDEIDFDVALYDLNSFLSILSLVSDD 70 Query: 395 LIASLHLNNH---GDTLTASYY 339 S+H + + DT + Y+ Sbjct: 71 AEISMHTDGNIKIADTRSTVYW 92
>HIS6_PHOPR (P62452) Imidazole glycerol phosphate synthase subunit hisF (EC| 4.1.3.-) (IGP synthase cyclase subunit) (IGP synthase subunit hisF) (ImGP synthase subunit hisF) (IGPS subunit hisF) Length = 257 Score = 32.3 bits (72), Expect = 1.4 Identities = 16/51 (31%), Positives = 27/51 (52%) Frame = -2 Query: 578 LQYLHEFASVNASVGLNPSPMVNLSGVFGSKELSVGVDVSFDTATSNFTKY 426 LQ+ + S+N+ NP+ + L+ FG + + VG+D FD T + Y Sbjct: 93 LQFGADKVSINSPALANPALITELADKFGVQCIVVGIDSYFDAETGKYQVY 143
>RIHC_ECOLI (P22564) Nonspecific ribonucleoside hydrolase rihC (EC 3.2.-.-)| (Purine/pyrimidine ribonucleoside hydrolase) Length = 304 Score = 30.8 bits (68), Expect = 4.1 Identities = 27/90 (30%), Positives = 37/90 (41%) Frame = +2 Query: 68 LKALAPMTNQLLCSSQLPWCQPRRRW*RVTLVAIHAGQGHWPCHNC*SVPSHWCAGPMSA 247 L A+ P+TN L SQ P C+P R R+ ++ AG+G NC A A Sbjct: 120 LVAIGPLTNIALLLSQCPECKPYIR--RLVIMGGSAGRG-----NCTPNAEFNIAADPEA 172 Query: 248 AIQISMCSRSLGSCGTALLQQQCLNVTLLS 337 A + + CG + Q L LS Sbjct: 173 AACVFRSGIEIVMCGLDVTNQAILTPDYLS 202
>RIHC_ECO57 (Q8XA41) Nonspecific ribonucleoside hydrolase rihC (EC 3.2.-.-)| (Purine/pyrimidine ribonucleoside hydrolase) Length = 304 Score = 30.8 bits (68), Expect = 4.1 Identities = 27/90 (30%), Positives = 37/90 (41%) Frame = +2 Query: 68 LKALAPMTNQLLCSSQLPWCQPRRRW*RVTLVAIHAGQGHWPCHNC*SVPSHWCAGPMSA 247 L A+ P+TN L SQ P C+P R R+ ++ AG+G NC A A Sbjct: 120 LVAIGPLTNIALLLSQCPECKPYIR--RLVIMGGSAGRG-----NCTPNAEFNIAADPEA 172 Query: 248 AIQISMCSRSLGSCGTALLQQQCLNVTLLS 337 A + + CG + Q L LS Sbjct: 173 AACVFRSGIEIVMCGLDVTNQAILTPDYLS 202
>HIS6_VIBCH (Q9KSW8) Imidazole glycerol phosphate synthase subunit hisF (EC| 4.1.3.-) (IGP synthase cyclase subunit) (IGP synthase subunit hisF) (ImGP synthase subunit hisF) (IGPS subunit hisF) Length = 257 Score = 30.4 bits (67), Expect = 5.3 Identities = 15/51 (29%), Positives = 27/51 (52%) Frame = -2 Query: 578 LQYLHEFASVNASVGLNPSPMVNLSGVFGSKELSVGVDVSFDTATSNFTKY 426 L++ + S+N+ NP + +L+ FG + + VG+D FD T + Y Sbjct: 93 LEFGADKVSINSPALANPQLITDLADRFGVQCIVVGIDSYFDKETGQYQVY 143
>CCBP2_HUMAN (O00590) Chemokine-binding protein 2 (Chemokine-binding protein D6)| (C-C chemokine receptor D6) (Chemokine receptor CCR-9) (Chemokine receptor CCR-10) Length = 384 Score = 30.4 bits (67), Expect = 5.3 Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 2/54 (3%) Frame = -1 Query: 360 HLDCVLLPLSKVTFKHCCWSRAVPQLPKE--REHIDIWIAALIGPAHQCEGTLQ 205 HLD L + F HCC+S + R+++ ++AA++G H GT Q Sbjct: 289 HLDYALQVTESIAFLHCCFSPILYAFSSHRFRQYLKAFLAAVLG-WHLAPGTAQ 341
>YICH_ECOLI (P31433) Hypothetical protein yicH| Length = 569 Score = 30.0 bits (66), Expect = 7.0 Identities = 21/62 (33%), Positives = 30/62 (48%), Gaps = 4/62 (6%) Frame = +1 Query: 493 PNTPERLTIGLGFSPTLAFTLANSWRYWSSSFPDLWSGTTKLRIDL-SPGV---ANSSTV 660 P+ P +LT G+ L + W WS S + T R+D+ P + ANSSTV Sbjct: 399 PDFPWQLTALDGYGANLTLVTDHKWGVWSGSANLNAAAATFNRVDVRRPSLALTANSSTV 458 Query: 661 NV 666 N+ Sbjct: 459 NI 460
>HIS6_VIBF1 (Q5E633) Imidazole glycerol phosphate synthase subunit hisF (EC| 4.1.3.-) (IGP synthase cyclase subunit) (IGP synthase subunit hisF) (ImGP synthase subunit hisF) (IGPS subunit hisF) Length = 257 Score = 30.0 bits (66), Expect = 7.0 Identities = 15/51 (29%), Positives = 26/51 (50%) Frame = -2 Query: 578 LQYLHEFASVNASVGLNPSPMVNLSGVFGSKELSVGVDVSFDTATSNFTKY 426 L++ + S+N+ NP + L+ FG + + VG+D FD T + Y Sbjct: 93 LEFGADKVSINSPALANPELITELADKFGVQCIVVGIDSYFDKDTGKYQVY 143
>VE1_HPV12 (Q05134) Replication protein E1 (EC 3.6.1.-) (ATP-dependent| helicase E1) Length = 604 Score = 30.0 bits (66), Expect = 7.0 Identities = 17/51 (33%), Positives = 27/51 (52%) Frame = -2 Query: 431 KYNAALSLAYPDLIASLHLNNHGDTLTASYYHLVKSHSSTAVGAELSHNFP 279 KY A + + +P L+ + ++N HG+T +Y +L S G E H FP Sbjct: 505 KYKAPVQIKFPPLLLTSNINVHGET---NYRYL----HSRIKGFEFPHPFP 548
>TDHA_HAEDU (Q7VNU1) TonB-dependent heme receptor A precursor| Length = 739 Score = 30.0 bits (66), Expect = 7.0 Identities = 24/91 (26%), Positives = 42/91 (46%), Gaps = 3/91 (3%) Frame = -2 Query: 629 KSILSLVVPDQRSGKLELQYLHEFASVNASVGLNPSPM-VNLSGVFGSKELSVGVDVSFD 453 +SI++ DQ+ ++ V+ + G PS +N+ G+ ++++ V VD Sbjct: 46 RSIITQNEIDQKQSDNVADLVNTVPGVSMAGGFRPSGQTLNIRGMGDTEDIRVQVD---- 101 Query: 452 TATSNFTKYNAALSLAYPDLI--ASLHLNNH 366 AT NF KY P+L+ S+ NH Sbjct: 102 GATKNFEKYQQGSLFIEPELLRRVSIDKGNH 132
>HIS6_VIBVU (Q8D8Q5) Imidazole glycerol phosphate synthase subunit hisF (EC| 4.1.3.-) (IGP synthase cyclase subunit) (IGP synthase subunit hisF) (ImGP synthase subunit hisF) (IGPS subunit hisF) Length = 257 Score = 29.6 bits (65), Expect = 9.1 Identities = 14/51 (27%), Positives = 27/51 (52%) Frame = -2 Query: 578 LQYLHEFASVNASVGLNPSPMVNLSGVFGSKELSVGVDVSFDTATSNFTKY 426 L++ + S+N+ NP + +L+ FG + + VG+D +D T + Y Sbjct: 93 LEFGADKVSINSPALANPQLITDLADKFGVQCIVVGIDSYYDKETGKYQVY 143
>HIS61_VIBVY (Q7MLS1) Imidazole glycerol phosphate synthase subunit hisF1 (EC| 4.1.3.-) (IGP synthase cyclase subunit) (IGP synthase subunit hisF1) (ImGP synthase subunit hisF1) (IGPS subunit hisF1) Length = 257 Score = 29.6 bits (65), Expect = 9.1 Identities = 14/51 (27%), Positives = 27/51 (52%) Frame = -2 Query: 578 LQYLHEFASVNASVGLNPSPMVNLSGVFGSKELSVGVDVSFDTATSNFTKY 426 L++ + S+N+ NP + +L+ FG + + VG+D +D T + Y Sbjct: 93 LEFGADKVSINSPALANPQLITDLADKFGVQCIVVGIDSYYDKETGKYQVY 143
>STHA_VIBCH (P50529) Soluble pyridine nucleotide transhydrogenase (EC 1.6.1.1)| (STH) (NAD(P)(+) transhydrogenase [B-specific]) Length = 466 Score = 29.6 bits (65), Expect = 9.1 Identities = 11/20 (55%), Positives = 15/20 (75%) Frame = -2 Query: 284 FPRNESTLIFGSQHSLDPHT 225 + RN+ TLIFG+ H +D HT Sbjct: 105 YDRNQCTLIFGAAHFIDAHT 124
>RIHC_ECOL6 (P0C0W2) Nonspecific ribonucleoside hydrolase rihC (EC 3.2.-.-)| (Purine/pyrimidine ribonucleoside hydrolase) Length = 304 Score = 29.6 bits (65), Expect = 9.1 Identities = 26/90 (28%), Positives = 37/90 (41%) Frame = +2 Query: 68 LKALAPMTNQLLCSSQLPWCQPRRRW*RVTLVAIHAGQGHWPCHNC*SVPSHWCAGPMSA 247 L A+ P+TN L SQ P C+P R R+ ++ AG+G NC A A Sbjct: 120 LVAIGPLTNIALLLSQCPECKPYIR--RLVIMGGSAGRG-----NCTPNAEFNIAADPEA 172 Query: 248 AIQISMCSRSLGSCGTALLQQQCLNVTLLS 337 A + + CG + Q L L+ Sbjct: 173 AACVFRSGIEIVMCGLDVTNQAILTPDYLA 202
>IKBA_PIG (Q08353) NF-kappa-B inhibitor alpha (I-kappa-B-alpha)| (IkappaBalpha) (IKB-alpha) (ECI-6) Length = 314 Score = 29.6 bits (65), Expect = 9.1 Identities = 28/101 (27%), Positives = 41/101 (40%), Gaps = 7/101 (6%) Frame = -2 Query: 575 QYLHEFASVNASVGLNPSPMVNLSGVFGSKEL--SVGVDVSFDTATSNFTKYNAALSLAY 402 Q+LH G + ++ G G EL S+G DV+ + T + A+ L Sbjct: 170 QHLHSILQATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQN 229 Query: 401 PDLIASLHLNNHGDTLTASY-----YHLVKSHSSTAVGAEL 294 PDL+ SL L D +Y Y L ST + +L Sbjct: 230 PDLV-SLLLKCGADVNRVTYQGYSPYQLTWGRPSTRIQQQL 269 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 104,840,694 Number of Sequences: 219361 Number of extensions: 2290040 Number of successful extensions: 6322 Number of sequences better than 10.0: 44 Number of HSP's better than 10.0 without gapping: 6046 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6316 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6882837918 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)