ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal16h13
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1CD2L7_HUMAN (Q9NYV4) Cell division cycle 2-related protein kinas... 28 7.2
2STPA_SYNY3 (Q55034) Glucosylglycerol-phosphate phosphatase (EC 3... 27 9.4

>CD2L7_HUMAN (Q9NYV4) Cell division cycle 2-related protein kinase 7 (EC|
           2.7.11.22) (CDC2-related protein kinase 7) (Cdc2-related
           kinase, arginine/serine-rich) (CrkRS)
          Length = 1490

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 14/28 (50%), Positives = 18/28 (64%)
 Frame = -3

Query: 347 RRITTRPVLGXRSWSRSTVSGRRSMKFR 264
           RR ++ P L  RS SRS +  R+SMK R
Sbjct: 329 RRRSSSPFLSKRSLSRSPLPSRKSMKSR 356



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>STPA_SYNY3 (Q55034) Glucosylglycerol-phosphate phosphatase (EC 3.1.3.69)|
           (Glucosylglycerol 3-phosphatase) (GGP-P) (Salt tolerance
           protein A)
          Length = 422

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 13/39 (33%), Positives = 21/39 (53%), Gaps = 3/39 (7%)
 Frame = -3

Query: 308 WSRSTVSGRRSMKFRFA*G---XXILATMISFYHNRTGK 201
           W+++  SG    +F    G     +LA +  +YHNRTG+
Sbjct: 234 WAKAGDSGTTDFQFMLRGGVKEAGVLALLNRYYHNRTGQ 272


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 38,816,812
Number of Sequences: 219361
Number of extensions: 557049
Number of successful extensions: 756
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 753
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 756
length of database: 80,573,946
effective HSP length: 94
effective length of database: 59,954,012
effective search space used: 1438896288
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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