ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal16h03
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_938515.1| PREDICTED: Homo sapiens hypothetical protein LO... 44 0.61
2ref|XM_929601.1| PREDICTED: Homo sapiens hypothetical protein LO... 44 0.61
3gb|AC115968.10| Mus musculus chromosome 1, clone RP24-72P6, comp... 42 2.4
4ref|XM_444838.1| Candida glabrata CBS138 hypothetical protein (C... 42 2.4
5emb|CR380947.1| Candida glabrata strain CBS138 chromosome A comp... 42 2.4
6dbj|AP007162.1| Aspergillus oryzae RIB40 genomic DNA, SC102 42 2.4
7gb|AC119212.15| Mus musculus chromosome 1, clone RP24-192L21, co... 42 2.4
8gb|AC136214.4| Mus musculus BAC clone RP23-53G11 from chromosome... 42 2.4
9dbj|AB032073.1| Nicotiana paniculata NpINPS1 mRNA for myo-inosit... 42 2.4
10dbj|AB009881.1| Nicotiana tabacum mRNA for myo-inositol 1-phosph... 42 2.4
11ref|XM_480120.1| Oryza sativa (japonica cultivar-group), mRNA 40 9.6
12ref|XM_477566.1| Oryza sativa (japonica cultivar-group), mRNA 40 9.6
13ref|XM_506269.1| PREDICTED Oryza sativa (japonica cultivar-group... 40 9.6
14gb|AC119244.12| Mus musculus chromosome 5, clone RP24-231P10, co... 40 9.6
15gb|AC099761.8| Mus musculus BAC clone RP23-230J6 from chromosome... 40 9.6
16ref|XM_607985.2| PREDICTED: Bos taurus similar to Thioredoxin-li... 40 9.6
17gb|AC125025.7| Mus musculus chromosome 5, clone RP24-340K5, comp... 40 9.6
18gb|AC102639.5| Mus musculus chromosome 3, clone RP23-461I15, com... 40 9.6
19gb|AC166993.4| Mus musculus BAC clone RP23-467D18 from chromosom... 40 9.6
20gb|AC099606.13| Mus musculus chromosome 7, clone RP23-360N6, com... 40 9.6
21emb|AJ566327.1|FSY566327 Ficus sycomorus microsatellite DNA, clo... 40 9.6
22emb|CR931785.6| Zebrafish DNA sequence from clone DKEY-230N5 in ... 40 9.6
23gb|AC126248.3| Mus musculus BAC clone RP24-422C6 from chromosome... 40 9.6
24gb|AC122505.4| Mus musculus BAC clone RP24-419P3 from chromosome... 40 9.6
25gb|AC122524.3| Mus musculus BAC clone RP24-494L9 from chromosome... 40 9.6
26gb|AC127371.3| Mus musculus BAC clone RP23-35D4 from 15, complet... 40 9.6
27ref|XM_815772.1| Trypanosoma cruzi strain CL Brener hypothetical... 40 9.6
28gb|AC127598.3| Mus musculus BAC clone RP23-84E16 from 7, complet... 40 9.6
29gb|AC122366.3| Mus musculus BAC clone RP23-447K15 from 14, compl... 40 9.6
30gb|AC114575.8| Mus musculus chromosome 12, clone RP23-152I9, com... 40 9.6
31gb|AC165082.2| Mus musculus BAC clone RP23-412H17 from chromosom... 40 9.6
32emb|AL365496.15| Human DNA sequence from clone RP11-449J3 on chr... 40 9.6
33gb|AC105071.7| Mus musculus, clone RP23-277C24, complete sequence 40 9.6
34gb|AC102463.12| Mus musculus chromosome 1, clone RP24-328M5, com... 40 9.6
35emb|AL645704.9| Mouse DNA sequence from clone RP23-414F19 on chr... 40 9.6
36emb|CR545468.10| Mouse DNA sequence from clone RP23-278H7 on chr... 40 9.6
37emb|BX000486.13| Zebrafish DNA sequence from clone DKEY-149M16 i... 40 9.6
38gb|AF387365.1|AF387365 Chlamydomonas reinhardtii pyruvate dehydr... 40 9.6
39gb|DP000046.1| Aotus nancymaae target 106 genomic scaffold 40 9.6
40gb|AC159007.2| Mus musculus BAC clone RP23-9O3 from chromosome 1... 40 9.6
41gb|AC135087.5| Mus musculus BAC clone RP23-270H16 from chromosom... 40 9.6
42gb|AC154336.2| Mus musculus BAC clone RP23-252B13 from chromosom... 40 9.6
43gb|AC160929.2| Mus musculus BAC clone RP24-380G7 from chromosome... 40 9.6
44gb|AC154360.3| Mus musculus BAC clone RP23-167I5 from chromosome... 40 9.6
45dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.6
46dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.6
47dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.6
48gb|AC159150.5| Mus musculus BAC RP23-339M5 (Roswell Park Cancer... 40 9.6
49gb|AC154714.3| Mus musculus BAC clone RP23-129H12 from chromosom... 40 9.6
50dbj|AP005683.2| Oryza sativa (japonica cultivar-group) genomic D... 40 9.6
51dbj|AP005830.4| Oryza sativa (japonica cultivar-group) genomic D... 40 9.6
52dbj|BS000054.1| Pan troglodytes chromosome 22 clone:RP43-147F06,... 40 9.6
53dbj|AP004461.3| Oryza sativa (japonica cultivar-group) genomic D... 40 9.6
54dbj|AK101530.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 9.6
55emb|CR318656.3| Zebrafish DNA sequence from clone CH211-88D2 in ... 40 9.6
56dbj|AK059375.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 9.6
57gb|AC125443.8| Mus musculus chromosome 1, clone RP24-493N12, com... 40 9.6
58gb|AC174640.3| Mus musculus BAC clone RP24-576A3 from chromosome... 40 9.6
59gb|AC115041.15| Mus musculus chromosome 3, clone RP24-285A14, co... 40 9.6
60dbj|AP001676.1| Homo sapiens genomic DNA, chromosome 21q, sectio... 40 9.6
61gb|AC134793.10| Mus musculus chromosome 15, clone RP23-159M8, co... 40 9.6
62emb|AL844866.17| Mouse DNA sequence from clone RP23-418O17 on ch... 40 9.6
63emb|BX005482.9| Mouse DNA sequence from clone RP23-146O10 on chr... 40 9.6
64gb|AC126039.3| Mus musculus BAC clone RP24-234N22 from 12, compl... 40 9.6
65emb|BX005231.8| Mouse DNA sequence from clone RP23-392C6 on chro... 40 9.6
66emb|BX005452.7| Mouse DNA sequence from clone RP23-158K12 on chr... 40 9.6
67emb|AL713853.6| Mouse DNA sequence from clone RP23-63C10 on chro... 40 9.6
68emb|AL806532.10| Mouse DNA sequence from clone RP23-387D16 on ch... 40 9.6
69emb|AL844149.4| Mouse DNA sequence from clone RP23-194D5 on chro... 40 9.6
70dbj|AP000403.1| Homo sapiens genomic DNA, chromosome 21q21.2, LL... 40 9.6
71emb|AL732449.5| Mouse DNA sequence from clone RP23-191F11 on chr... 40 9.6 
>ref|XM_938515.1| PREDICTED: Homo sapiens hypothetical protein LOC649434 (LOC649434),
           mRNA
          Length = 978

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 430 ccagctgagcagtcatcagagccatg 455
           |||||||||||||| |||||||||||
Sbjct: 226 ccagctgagcagtcctcagagccatg 201
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>ref|XM_929601.1| PREDICTED: Homo sapiens hypothetical protein LOC646658 (LOC646658),
           mRNA
          Length = 978

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 430 ccagctgagcagtcatcagagccatg 455
           |||||||||||||| |||||||||||
Sbjct: 226 ccagctgagcagtcctcagagccatg 201
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>gb|AC115968.10| Mus musculus chromosome 1, clone RP24-72P6, complete sequence
          Length = 229959

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 350    tttctctagctcttctttcca 370
              |||||||||||||||||||||
Sbjct: 208610 tttctctagctcttctttcca 208630
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>ref|XM_444838.1| Candida glabrata CBS138 hypothetical protein (CAGL0A01672g) partial
           mRNA
          Length = 2085

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 344 ttcctttttctctagctcttc 364
           |||||||||||||||||||||
Sbjct: 231 ttcctttttctctagctcttc 211
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>emb|CR380947.1| Candida glabrata strain CBS138 chromosome A complete sequence
          Length = 485192

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 344    ttcctttttctctagctcttc 364
              |||||||||||||||||||||
Sbjct: 161998 ttcctttttctctagctcttc 162018
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>dbj|AP007162.1| Aspergillus oryzae RIB40 genomic DNA, SC102
          Length = 1779707

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 663    tgacttaattagccttttagt 683
              |||||||||||||||||||||
Sbjct: 848847 tgacttaattagccttttagt 848867
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>gb|AC119212.15| Mus musculus chromosome 1, clone RP24-192L21, complete sequence
          Length = 174380

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 350   tttctctagctcttctttcca 370
             |||||||||||||||||||||
Sbjct: 14714 tttctctagctcttctttcca 14734
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>gb|AC136214.4| Mus musculus BAC clone RP23-53G11 from chromosome 10, complete sequence
          Length = 203909

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 297    ttcttcaaaacctcctctgcttcct 321
              |||||||||||||||| ||||||||
Sbjct: 154814 ttcttcaaaacctcctatgcttcct 154838
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>dbj|AB032073.1| Nicotiana paniculata NpINPS1 mRNA for myo-inositol-1-phosphate
           synthase, complete cds
          Length = 1931

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 627 caactgcttttgtagatcaat 647
           |||||||||||||||||||||
Sbjct: 592 caactgcttttgtagatcaat 572
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>dbj|AB009881.1| Nicotiana tabacum mRNA for myo-inositol 1-phosphate synthase,
           complete cds
          Length = 1959

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 627 caactgcttttgtagatcaat 647
           |||||||||||||||||||||
Sbjct: 594 caactgcttttgtagatcaat 574
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>ref|XM_480120.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1497

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 518 catgaacctgctgcagaaga 537
           ||||||||||||||||||||
Sbjct: 215 catgaacctgctgcagaaga 234
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>ref|XM_477566.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1081

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 300 ttcaaaacctcctctgcttc 319
           ||||||||||||||||||||
Sbjct: 921 ttcaaaacctcctctgcttc 902
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>ref|XM_506269.1| PREDICTED Oryza sativa (japonica cultivar-group), B1120F06.103 mRNA
          Length = 1083

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 300 ttcaaaacctcctctgcttc 319
           ||||||||||||||||||||
Sbjct: 912 ttcaaaacctcctctgcttc 893
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>gb|AC119244.12| Mus musculus chromosome 5, clone RP24-231P10, complete sequence
          Length = 210235

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 447   agagccatgagtcccaacat 466
             ||||||||||||||||||||
Sbjct: 16648 agagccatgagtcccaacat 16629
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>gb|AC099761.8| Mus musculus BAC clone RP23-230J6 from chromosome 10, complete sequence
          Length = 182574

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 447    agagccatgagtcccaacat 466
              ||||||||||||||||||||
Sbjct: 118781 agagccatgagtcccaacat 118800
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>ref|XM_607985.2| PREDICTED: Bos taurus similar to Thioredoxin-like protein KIAA1162
           precursor (LOC529535), partial mRNA
          Length = 534

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 307 cctcctctgcttccttctca 326
           ||||||||||||||||||||
Sbjct: 325 cctcctctgcttccttctca 306
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>gb|AC125025.7| Mus musculus chromosome 5, clone RP24-340K5, complete sequence
          Length = 175313

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 447    agagccatgagtcccaacat 466
              ||||||||||||||||||||
Sbjct: 162195 agagccatgagtcccaacat 162176
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>gb|AC102639.5| Mus musculus chromosome 3, clone RP23-461I15, complete sequence
          Length = 199243

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 447   agagccatgagtcccaacat 466
             ||||||||||||||||||||
Sbjct: 30049 agagccatgagtcccaacat 30068
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>gb|AC166993.4| Mus musculus BAC clone RP23-467D18 from chromosome 17, complete
             sequence
          Length = 199776

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 447   agagccatgagtcccaacat 466
             ||||||||||||||||||||
Sbjct: 92647 agagccatgagtcccaacat 92666
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>gb|AC099606.13| Mus musculus chromosome 7, clone RP23-360N6, complete sequence
          Length = 193975

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 447   agagccatgagtcccaacat 466
             ||||||||||||||||||||
Sbjct: 72666 agagccatgagtcccaacat 72647
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>emb|AJ566327.1|FSY566327 Ficus sycomorus microsatellite DNA, clone FIGT09E11
          Length = 315

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 349 ttttctctagctcttctttc 368
           ||||||||||||||||||||
Sbjct: 49  ttttctctagctcttctttc 68
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>emb|CR931785.6| Zebrafish DNA sequence from clone DKEY-230N5 in linkage group 7,
             complete sequence
          Length = 196531

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 473   gtaacaggcacatcactgtc 492
             ||||||||||||||||||||
Sbjct: 42160 gtaacaggcacatcactgtc 42141
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>gb|AC126248.3| Mus musculus BAC clone RP24-422C6 from chromosome 3, complete sequence
          Length = 192092

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 447    agagccatgagtcccaacat 466
              ||||||||||||||||||||
Sbjct: 154767 agagccatgagtcccaacat 154786
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>gb|AC122505.4| Mus musculus BAC clone RP24-419P3 from chromosome 6, complete sequence
          Length = 161366

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 360   tcttctttccattttctagc 379
             ||||||||||||||||||||
Sbjct: 49509 tcttctttccattttctagc 49528
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>gb|AC122524.3| Mus musculus BAC clone RP24-494L9 from chromosome 6, complete
            sequence
          Length = 201568

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 360  tcttctttccattttctagc 379
            ||||||||||||||||||||
Sbjct: 6126 tcttctttccattttctagc 6107
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>gb|AC127371.3| Mus musculus BAC clone RP23-35D4 from 15, complete sequence
          Length = 210688

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 447    agagccatgagtcccaacat 466
              ||||||||||||||||||||
Sbjct: 201013 agagccatgagtcccaacat 201032
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>ref|XM_815772.1| Trypanosoma cruzi strain CL Brener hypothetical protein
           (Tc00.1047053508479.280) partial mRNA
          Length = 1104

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 309 tcctctgcttccttctcagc 328
           ||||||||||||||||||||
Sbjct: 794 tcctctgcttccttctcagc 775
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>gb|AC127598.3| Mus musculus BAC clone RP23-84E16 from 7, complete sequence
          Length = 186752

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 447    agagccatgagtcccaacat 466
              ||||||||||||||||||||
Sbjct: 115289 agagccatgagtcccaacat 115308
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>gb|AC122366.3| Mus musculus BAC clone RP23-447K15 from 14, complete sequence
          Length = 175591

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 447   agagccatgagtcccaacat 466
             ||||||||||||||||||||
Sbjct: 60313 agagccatgagtcccaacat 60332
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>gb|AC114575.8| Mus musculus chromosome 12, clone RP23-152I9, complete sequence
          Length = 193164

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 447   agagccatgagtcccaacat 466
             ||||||||||||||||||||
Sbjct: 81012 agagccatgagtcccaacat 81031
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>gb|AC165082.2| Mus musculus BAC clone RP23-412H17 from chromosome 17, complete
             sequence
          Length = 196132

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 447   agagccatgagtcccaacat 466
             ||||||||||||||||||||
Sbjct: 13575 agagccatgagtcccaacat 13556
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>emb|AL365496.15| Human DNA sequence from clone RP11-449J3 on chromosome 10 Contains the
             3' end of the PCDH15 gene for protocadherin 15 and a novel
             gene, complete sequence
          Length = 173728

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 68    ttaaagtcaaactttgacaa 87
             ||||||||||||||||||||
Sbjct: 63416 ttaaagtcaaactttgacaa 63435
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>gb|AC105071.7| Mus musculus, clone RP23-277C24, complete sequence
          Length = 199946

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 447    agagccatgagtcccaacat 466
              ||||||||||||||||||||
Sbjct: 173356 agagccatgagtcccaacat 173337
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>gb|AC102463.12| Mus musculus chromosome 1, clone RP24-328M5, complete sequence
          Length = 155111

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 447  agagccatgagtcccaacat 466
            ||||||||||||||||||||
Sbjct: 2673 agagccatgagtcccaacat 2654
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>emb|AL645704.9| Mouse DNA sequence from clone RP23-414F19 on chromosome 13 Contains
            the Spi11 and Spi14 genes for serine protease inhibitors
            11 and 14, the gene for a novel serine protease inhibitor
            (Spi) family member and a Spi11 pseudogene, complete
            sequence
          Length = 150424

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 579  agcagaaacatgactccttt 598
            ||||||||||||||||||||
Sbjct: 9283 agcagaaacatgactccttt 9302
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>emb|CR545468.10| Mouse DNA sequence from clone RP23-278H7 on chromosome X, complete
             sequence
          Length = 38097

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 447   agagccatgagtcccaacat 466
             ||||||||||||||||||||
Sbjct: 35008 agagccatgagtcccaacat 35027



 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 447   agagccatgagtcccaacat 466
             ||||||||||||||||||||
Sbjct: 20862 agagccatgagtcccaacat 20843
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>emb|BX000486.13| Zebrafish DNA sequence from clone DKEY-149M16 in linkage group 10,
             complete sequence
          Length = 195419

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 150   tacaggtctttattcatctc 169
             ||||||||||||||||||||
Sbjct: 46942 tacaggtctttattcatctc 46923
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>gb|AF387365.1|AF387365 Chlamydomonas reinhardtii pyruvate dehydrogenase kinase-like protein
            (pdk) gene, complete cds
          Length = 5813

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 433  gctgagcagtcatcagagccatga 456
            |||| |||||||||||||||||||
Sbjct: 3827 gctgggcagtcatcagagccatga 3804
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>gb|DP000046.1| Aotus nancymaae target 106 genomic scaffold
          Length = 387541

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 307    cctcctctgcttccttctca 326
              ||||||||||||||||||||
Sbjct: 304407 cctcctctgcttccttctca 304388
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>gb|AC159007.2| Mus musculus BAC clone RP23-9O3 from chromosome 14, complete sequence
          Length = 172108

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 447    agagccatgagtcccaacat 466
              ||||||||||||||||||||
Sbjct: 170719 agagccatgagtcccaacat 170738
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>gb|AC135087.5| Mus musculus BAC clone RP23-270H16 from chromosome 1, complete sequence
          Length = 172385

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 447    agagccatgagtcccaacat 466
              ||||||||||||||||||||
Sbjct: 129649 agagccatgagtcccaacat 129630
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>gb|AC154336.2| Mus musculus BAC clone RP23-252B13 from chromosome 9, complete sequence
          Length = 184358

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 447   agagccatgagtcccaacat 466
             ||||||||||||||||||||
Sbjct: 56366 agagccatgagtcccaacat 56347
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>gb|AC160929.2| Mus musculus BAC clone RP24-380G7 from chromosome 12, complete sequence
          Length = 163333

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 308   ctcctctgcttccttctcag 327
             ||||||||||||||||||||
Sbjct: 53403 ctcctctgcttccttctcag 53422
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>gb|AC154360.3| Mus musculus BAC clone RP23-167I5 from chromosome 14, complete sequence
          Length = 198179

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 447    agagccatgagtcccaacat 466
              ||||||||||||||||||||
Sbjct: 126881 agagccatgagtcccaacat 126900
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 209      gccctccatgagctggagcagctc 232
                |||| |||||||||||||||||||
Sbjct: 14474713 gcccgccatgagctggagcagctc 14474736
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 518     catgaacctgctgcagaaga 537
               ||||||||||||||||||||
Sbjct: 2918115 catgaacctgctgcagaaga 2918134
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 300      ttcaaaacctcctctgcttc 319
                ||||||||||||||||||||
Sbjct: 11546362 ttcaaaacctcctctgcttc 11546381
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>gb|AC159150.5| Mus musculus  BAC RP23-339M5 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 205775

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 333   ctcatgtgatgttccttttt 352
             ||||||||||||||||||||
Sbjct: 85251 ctcatgtgatgttccttttt 85270
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>gb|AC154714.3| Mus musculus BAC clone RP23-129H12 from chromosome 12, complete sequence
          Length = 200017

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 447    agagccatgagtcccaacat 466
              ||||||||||||||||||||
Sbjct: 199625 agagccatgagtcccaacat 199644
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>dbj|AP005683.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OJ1585_D02
          Length = 103172

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 209   gccctccatgagctggagcagctc 232
             |||| |||||||||||||||||||
Sbjct: 74278 gcccgccatgagctggagcagctc 74301
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>dbj|AP005830.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:B1120F06
          Length = 186712

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 300    ttcaaaacctcctctgcttc 319
              ||||||||||||||||||||
Sbjct: 110020 ttcaaaacctcctctgcttc 110039
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>dbj|BS000054.1| Pan troglodytes chromosome 22 clone:RP43-147F06, map 22, complete
             sequences
          Length = 145481

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 288   tcttctgagttcttcaaaac 307
             ||||||||||||||||||||
Sbjct: 40569 tcttctgagttcttcaaaac 40550
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>dbj|AP004461.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0443G08
          Length = 162139

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 518   catgaacctgctgcagaaga 537
             ||||||||||||||||||||
Sbjct: 91177 catgaacctgctgcagaaga 91196
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>dbj|AK101530.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033047I05, full
           insert sequence
          Length = 1496

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 518 catgaacctgctgcagaaga 537
           ||||||||||||||||||||
Sbjct: 215 catgaacctgctgcagaaga 234
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>emb|CR318656.3| Zebrafish DNA sequence from clone CH211-88D2 in linkage group 22,
             complete sequence
          Length = 87766

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 55    actttttgacaagttaaagtcaaacttt 82
             ||||||||||| ||||||||||| ||||
Sbjct: 46179 actttttgacatgttaaagtcaagcttt 46206
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>dbj|AK059375.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-026-F06, full
           insert sequence
          Length = 1081

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 300 ttcaaaacctcctctgcttc 319
           ||||||||||||||||||||
Sbjct: 921 ttcaaaacctcctctgcttc 902
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>gb|AC125443.8| Mus musculus chromosome 1, clone RP24-493N12, complete sequence
          Length = 156248

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 447   agagccatgagtcccaacat 466
             ||||||||||||||||||||
Sbjct: 57943 agagccatgagtcccaacat 57924
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>gb|AC174640.3| Mus musculus BAC clone RP24-576A3 from chromosome 6, complete sequence
          Length = 270621

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 360   tcttctttccattttctagc 379
             ||||||||||||||||||||
Sbjct: 32732 tcttctttccattttctagc 32751
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>gb|AC115041.15| Mus musculus chromosome 3, clone RP24-285A14, complete sequence
          Length = 149484

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 447   agagccatgagtcccaacat 466
             ||||||||||||||||||||
Sbjct: 66718 agagccatgagtcccaacat 66699
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>dbj|AP001676.1| Homo sapiens genomic DNA, chromosome 21q, section 20/105
          Length = 340000

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 288    tcttctgagttcttcaaaac 307
              ||||||||||||||||||||
Sbjct: 312310 tcttctgagttcttcaaaac 312291
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>gb|AC134793.10| Mus musculus chromosome 15, clone RP23-159M8, complete sequence
          Length = 216860

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 447    agagccatgagtcccaacat 466
              ||||||||||||||||||||
Sbjct: 163177 agagccatgagtcccaacat 163158
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>emb|AL844866.17| Mouse DNA sequence from clone RP23-418O17 on chromosome X, complete
             sequence
          Length = 173461

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 447   agagccatgagtcccaacat 466
             ||||||||||||||||||||
Sbjct: 46539 agagccatgagtcccaacat 46520
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>emb|BX005482.9| Mouse DNA sequence from clone RP23-146O10 on chromosome X, complete
              sequence
          Length = 169991

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 447    agagccatgagtcccaacat 466
              ||||||||||||||||||||
Sbjct: 163671 agagccatgagtcccaacat 163690
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>gb|AC126039.3| Mus musculus BAC clone RP24-234N22 from 12, complete sequence
          Length = 154037

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 308   ctcctctgcttccttctcag 327
             ||||||||||||||||||||
Sbjct: 29851 ctcctctgcttccttctcag 29832
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>emb|BX005231.8| Mouse DNA sequence from clone RP23-392C6 on chromosome X, complete
              sequence
          Length = 129970

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 447    agagccatgagtcccaacat 466
              ||||||||||||||||||||
Sbjct: 111278 agagccatgagtcccaacat 111297
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>emb|BX005452.7| Mouse DNA sequence from clone RP23-158K12 on chromosome X, complete
              sequence
          Length = 167118

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 245    ctgggtttctttgtcggtct 264
              ||||||||||||||||||||
Sbjct: 127856 ctgggtttctttgtcggtct 127837
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>emb|AL713853.6| Mouse DNA sequence from clone RP23-63C10 on chromosome 2, complete
              sequence
          Length = 178652

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 447    agagccatgagtcccaacat 466
              ||||||||||||||||||||
Sbjct: 165758 agagccatgagtcccaacat 165739
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>emb|AL806532.10| Mouse DNA sequence from clone RP23-387D16 on chromosome X, complete
              sequence
          Length = 209714

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 447    agagccatgagtcccaacat 466
              ||||||||||||||||||||
Sbjct: 126045 agagccatgagtcccaacat 126064
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>emb|AL844149.4| Mouse DNA sequence from clone RP23-194D5 on chromosome 4, complete
             sequence
          Length = 199774

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 447   agagccatgagtcccaacat 466
             ||||||||||||||||||||
Sbjct: 73498 agagccatgagtcccaacat 73479
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>dbj|AP000403.1| Homo sapiens genomic DNA, chromosome 21q21.2, LL56-APP region,
              clone:B330A3, complete sequence
          Length = 160920

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 288    tcttctgagttcttcaaaac 307
              ||||||||||||||||||||
Sbjct: 153709 tcttctgagttcttcaaaac 153690
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>emb|AL732449.5| Mouse DNA sequence from clone RP23-191F11 on chromosome X, complete
             sequence
          Length = 160779

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 447   agagccatgagtcccaacat 466
             ||||||||||||||||||||
Sbjct: 74786 agagccatgagtcccaacat 74805


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,786,466
Number of Sequences: 3902068
Number of extensions: 6786466
Number of successful extensions: 149663
Number of sequences better than 10.0: 71
Number of HSP's better than 10.0 without gapping: 71
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 149350
Number of HSP's gapped (non-prelim): 313
length of query: 699
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 676
effective length of database: 17,143,297,704
effective search space: 11588869247904
effective search space used: 11588869247904
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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