ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaal16h01 |
|---|---|
| Clone Library Name | barley_pub |
>CB13_LYCES (P27522) Chlorophyll a-b binding protein 8, chloroplast precursor| (LHCI type III CAB-8) Length = 273 Score = 81.6 bits (200), Expect = 4e-16 Identities = 37/46 (80%), Positives = 42/46 (91%) Frame = -2 Query: 285 NGRLAMLAFLGMSLQAIFTGVGPFQNLLDHLSDPVNNNILTSLKFH 148 NGRLAMLA LG +QA+ TGVGP+QNLLDHL+DPVNNN+LTSLKFH Sbjct: 228 NGRLAMLAILGYFIQALVTGVGPYQNLLDHLADPVNNNVLTSLKFH 273
>CB28_PEA (P27490) Chlorophyll a-b binding protein 8, chloroplast precursor| (LHCII type I CAB-8) Length = 268 Score = 57.8 bits (138), Expect = 7e-09 Identities = 26/38 (68%), Positives = 29/38 (76%) Frame = -2 Query: 285 NGRLAMLAFLGMSLQAIFTGVGPFQNLLDHLSDPVNNN 172 NGRLAM + G +QAI TG GP +NL DHLSDPVNNN Sbjct: 219 NGRLAMFSMFGFFVQAIVTGKGPLENLADHLSDPVNNN 256
>CB21_RAPSA (P14584) Chlorophyll a-b binding of LHCII type 1 protein| (Chlorophyll a-b binding of LHCII type I protein) (CAB) (LHCP) (Fragment) Length = 124 Score = 56.6 bits (135), Expect = 1e-08 Identities = 25/38 (65%), Positives = 29/38 (76%) Frame = -2 Query: 285 NGRLAMLAFLGMSLQAIFTGVGPFQNLLDHLSDPVNNN 172 NGRLAM + G +QAI TG GP +NL DHL+DPVNNN Sbjct: 75 NGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 112
>CB22_ORYSA (P12331) Chlorophyll a-b binding protein 2, chloroplast precursor| (LHCII type I CAB-2) (LHCP) Length = 261 Score = 56.6 bits (135), Expect = 1e-08 Identities = 25/38 (65%), Positives = 29/38 (76%) Frame = -2 Query: 285 NGRLAMLAFLGMSLQAIFTGVGPFQNLLDHLSDPVNNN 172 NGRLAM + G +QAI TG GP +NL DHL+DPVNNN Sbjct: 212 NGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 249
>CB2G_LYCES (P07369) Chlorophyll a-b binding protein 3C, chloroplast precursor| (LHCII type I CAB-3C) (LHCP) Length = 267 Score = 56.6 bits (135), Expect = 1e-08 Identities = 25/38 (65%), Positives = 29/38 (76%) Frame = -2 Query: 285 NGRLAMLAFLGMSLQAIFTGVGPFQNLLDHLSDPVNNN 172 NGRLAM + G +QAI TG GP +NL DHL+DPVNNN Sbjct: 218 NGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 255
>CB2A_SPIOL (P12333) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 267 Score = 56.6 bits (135), Expect = 1e-08 Identities = 25/38 (65%), Positives = 29/38 (76%) Frame = -2 Query: 285 NGRLAMLAFLGMSLQAIFTGVGPFQNLLDHLSDPVNNN 172 NGRLAM + G +QAI TG GP +NL DHL+DPVNNN Sbjct: 218 NGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 255
>CB27_TOBAC (P27491) Chlorophyll a-b binding protein 7, chloroplast precursor| (LHCII type I CAB-7) (LHCP) Length = 267 Score = 56.6 bits (135), Expect = 1e-08 Identities = 25/38 (65%), Positives = 29/38 (76%) Frame = -2 Query: 285 NGRLAMLAFLGMSLQAIFTGVGPFQNLLDHLSDPVNNN 172 NGRLAM + G +QAI TG GP NL+DHL+DPVNNN Sbjct: 218 NGRLAMFSMFGFFVQAIVTGKGPLDNLVDHLADPVNNN 255
>CB25_TOBAC (P27496) Chlorophyll a-b binding protein 50, chloroplast precursor| (LHCII type I CAB-50) (LHCP) Length = 267 Score = 56.6 bits (135), Expect = 1e-08 Identities = 25/38 (65%), Positives = 29/38 (76%) Frame = -2 Query: 285 NGRLAMLAFLGMSLQAIFTGVGPFQNLLDHLSDPVNNN 172 NGRLAM + G +QAI TG GP +NL DHL+DPVNNN Sbjct: 218 NGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 255
>CB25_PETSP (P04783) Chlorophyll a-b binding protein 91R, chloroplast precursor| (LHCII type I CAB-91R) (LHCP) Length = 267 Score = 56.6 bits (135), Expect = 1e-08 Identities = 25/38 (65%), Positives = 29/38 (76%) Frame = -2 Query: 285 NGRLAMLAFLGMSLQAIFTGVGPFQNLLDHLSDPVNNN 172 NGRLAM + G +QAI TG GP +NL DHL+DPVNNN Sbjct: 218 NGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 255
>CB24_TOBAC (P27495) Chlorophyll a-b binding protein 40, chloroplast precursor| (LHCII type I CAB-40) (LHCP) Length = 267 Score = 56.6 bits (135), Expect = 1e-08 Identities = 25/38 (65%), Positives = 29/38 (76%) Frame = -2 Query: 285 NGRLAMLAFLGMSLQAIFTGVGPFQNLLDHLSDPVNNN 172 NGRLAM + G +QAI TG GP +NL DHL+DPVNNN Sbjct: 218 NGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 255
>CB23_PETSP (P04781) Chlorophyll a-b binding protein 22R, chloroplast precursor| (LHCII type I CAB-22R) (LHCP) Length = 267 Score = 56.6 bits (135), Expect = 1e-08 Identities = 25/38 (65%), Positives = 29/38 (76%) Frame = -2 Query: 285 NGRLAMLAFLGMSLQAIFTGVGPFQNLLDHLSDPVNNN 172 NGRLAM + G +QAI TG GP +NL DHL+DPVNNN Sbjct: 218 NGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 255
>CB23_NICPL (P12469) Chlorophyll a-b binding protein C, chloroplast precursor| (LHCII type I CAB-C) (LHCP) Length = 267 Score = 56.6 bits (135), Expect = 1e-08 Identities = 25/38 (65%), Positives = 29/38 (76%) Frame = -2 Query: 285 NGRLAMLAFLGMSLQAIFTGVGPFQNLLDHLSDPVNNN 172 NGRLAM + G +QAI TG GP +NL DHL+DPVNNN Sbjct: 218 NGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 255
>CB22_ARATH (P04778) Chlorophyll a-b binding protein 2, chloroplast precursor| (LHCII type I CAB-2) (CAB-140) (LHCP) Length = 267 Score = 56.6 bits (135), Expect = 1e-08 Identities = 25/38 (65%), Positives = 29/38 (76%) Frame = -2 Query: 285 NGRLAMLAFLGMSLQAIFTGVGPFQNLLDHLSDPVNNN 172 NGRLAM + G +QAI TG GP +NL DHL+DPVNNN Sbjct: 218 NGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNNN 255
>CB21_ARATH (P04777) Chlorophyll a-b binding protein 165/180, chloroplast| precursor (LHCII type I CAB-165/180) Length = 267 Score = 56.6 bits (135), Expect = 1e-08 Identities = 25/38 (65%), Positives = 29/38 (76%) Frame = -2 Query: 285 NGRLAMLAFLGMSLQAIFTGVGPFQNLLDHLSDPVNNN 172 NGRLAM + G +QAI TG GP +NL DHL+DPVNNN Sbjct: 218 NGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNNN 255
>CB2D_LYCES (P10707) Chlorophyll a-b binding protein 1D (LHCII type I CAB-1D)| (LHCP) (Fragment) Length = 116 Score = 56.6 bits (135), Expect = 1e-08 Identities = 25/38 (65%), Positives = 29/38 (76%) Frame = -2 Query: 285 NGRLAMLAFLGMSLQAIFTGVGPFQNLLDHLSDPVNNN 172 NGRLAM + G +QAI TG GP +NL DHL+DPVNNN Sbjct: 67 NGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 104
>CB48_MAIZE (Q00827) Chlorophyll a-b binding protein 48, chloroplast precursor| (LHCII type I CAB-48) (LHCP) Length = 264 Score = 56.6 bits (135), Expect = 1e-08 Identities = 25/38 (65%), Positives = 29/38 (76%) Frame = -2 Query: 285 NGRLAMLAFLGMSLQAIFTGVGPFQNLLDHLSDPVNNN 172 NGRLAM + G +QAI TG GP +NL DHL+DPVNNN Sbjct: 215 NGRLAMFSMFGFFVQAIVTGKGPIENLADHLTDPVNNN 252
>CB23_APIGR (P92919) Chlorophyll a-b binding protein, chloroplast precursor| (Allergen Api g 3) Length = 264 Score = 56.6 bits (135), Expect = 1e-08 Identities = 25/38 (65%), Positives = 29/38 (76%) Frame = -2 Query: 285 NGRLAMLAFLGMSLQAIFTGVGPFQNLLDHLSDPVNNN 172 NGRLAM + G +QAI TG GP +NL DHL+DPVNNN Sbjct: 215 NGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 252
>CB22_HORVU (P08963) Chlorophyll a-b binding protein 2, chloroplast precursor| (LHCII type I CAB-2) (LHCP) Length = 264 Score = 56.6 bits (135), Expect = 1e-08 Identities = 25/38 (65%), Positives = 29/38 (76%) Frame = -2 Query: 285 NGRLAMLAFLGMSLQAIFTGVGPFQNLLDHLSDPVNNN 172 NGRLAM + G +QAI TG GP +NL DHL+DPVNNN Sbjct: 215 NGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 252
>CB2B_PINSY (P15194) Chlorophyll a-b binding protein type 2 member 1B,| chloroplast precursor (Chlorophyll a-b binding protein type II 1B) (CAB) (LHCP) Length = 274 Score = 56.6 bits (135), Expect = 1e-08 Identities = 25/38 (65%), Positives = 29/38 (76%) Frame = -2 Query: 285 NGRLAMLAFLGMSLQAIFTGVGPFQNLLDHLSDPVNNN 172 NGRLAM + G +QAI TG GP +NL DHL+DPVNNN Sbjct: 225 NGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNNN 262
>CB21_CUCSA (P08221) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) (Fragment) Length = 255 Score = 56.6 bits (135), Expect = 1e-08 Identities = 25/38 (65%), Positives = 29/38 (76%) Frame = -2 Query: 285 NGRLAMLAFLGMSLQAIFTGVGPFQNLLDHLSDPVNNN 172 NGRLAM + G +QAI TG GP +NL DHL+DPVNNN Sbjct: 206 NGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 243
>CB24_PETSP (P04782) Chlorophyll a-b binding protein 25, chloroplast precursor| (LHCII type I CAB-25) (LHCP) Length = 266 Score = 56.6 bits (135), Expect = 1e-08 Identities = 25/38 (65%), Positives = 29/38 (76%) Frame = -2 Query: 285 NGRLAMLAFLGMSLQAIFTGVGPFQNLLDHLSDPVNNN 172 NGRLAM + G +QAI TG GP +NL DHL+DPVNNN Sbjct: 217 NGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 254
>CB21_TOBAC (P27492) Chlorophyll a-b binding protein 16, chloroplast precursor| (LHCII type I CAB-16) (LHCP) Length = 266 Score = 56.6 bits (135), Expect = 1e-08 Identities = 25/38 (65%), Positives = 29/38 (76%) Frame = -2 Query: 285 NGRLAMLAFLGMSLQAIFTGVGPFQNLLDHLSDPVNNN 172 NGRLAM + G +QAI TG GP +NL DHL+DPVNNN Sbjct: 217 NGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 254
>CB21_SINAL (P13851) Chlorophyll a-b binding protein 1, chloroplast precursor| (LHCII type I CAB-1) (LHCP) Length = 266 Score = 56.6 bits (135), Expect = 1e-08 Identities = 25/38 (65%), Positives = 29/38 (76%) Frame = -2 Query: 285 NGRLAMLAFLGMSLQAIFTGVGPFQNLLDHLSDPVNNN 172 NGRLAM + G +QAI TG GP +NL DHL+DPVNNN Sbjct: 217 NGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 254
>CB21_PETSP (P04779) Chlorophyll a-b binding protein 13, chloroplast precursor| (LHCII type I CAB-13) (LHCP) Length = 266 Score = 56.6 bits (135), Expect = 1e-08 Identities = 25/38 (65%), Positives = 29/38 (76%) Frame = -2 Query: 285 NGRLAMLAFLGMSLQAIFTGVGPFQNLLDHLSDPVNNN 172 NGRLAM + G +QAI TG GP +NL DHL+DPVNNN Sbjct: 217 NGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 254
>CB22_SOYBN (P09755) Chlorophyll a-b binding protein 2, chloroplast precursor| (LHCII type I CAB-2) (LHCP) Length = 256 Score = 56.6 bits (135), Expect = 1e-08 Identities = 25/38 (65%), Positives = 29/38 (76%) Frame = -2 Query: 285 NGRLAMLAFLGMSLQAIFTGVGPFQNLLDHLSDPVNNN 172 NGRLAM + G +QAI TG GP +NL DHL+DPVNNN Sbjct: 207 NGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 244
>CB22_PEA (P07371) Chlorophyll a-b binding protein AB80, chloroplast| precursor (LHCII type I CAB-AB80) (LHCP) Length = 269 Score = 56.6 bits (135), Expect = 1e-08 Identities = 25/38 (65%), Positives = 29/38 (76%) Frame = -2 Query: 285 NGRLAMLAFLGMSLQAIFTGVGPFQNLLDHLSDPVNNN 172 NGRLAM + G +QAI TG GP +NL DHL+DPVNNN Sbjct: 220 NGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 257
>CB2A_PYRPY (P24006) Chlorophyll a-b binding protein 1A, chloroplast precursor| (LHCII type II CAB-1A) (LHCP) Length = 278 Score = 56.6 bits (135), Expect = 1e-08 Identities = 25/38 (65%), Positives = 29/38 (76%) Frame = -2 Query: 285 NGRLAMLAFLGMSLQAIFTGVGPFQNLLDHLSDPVNNN 172 NGRLAM + G +QAI TG GP +NL DHL+DPVNNN Sbjct: 229 NGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNNN 266
>CB2A_PINSY (P15193) Chlorophyll a-b binding protein type 2 member 1A,| chloroplast precursor (Chlorophyll a-b binding protein type II 1A) (CAB) (LHCP) Length = 278 Score = 56.6 bits (135), Expect = 1e-08 Identities = 25/38 (65%), Positives = 29/38 (76%) Frame = -2 Query: 285 NGRLAMLAFLGMSLQAIFTGVGPFQNLLDHLSDPVNNN 172 NGRLAM + G +QAI TG GP +NL DHL+DPVNNN Sbjct: 229 NGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNNN 266
>CB22_CUCSA (P08222) Chlorophyll a-b binding protein of LHCII type 1| (Chlorophyll a-b binding protein of LHCII type I) (CAB) (LHCP) (Fragment) Length = 206 Score = 56.6 bits (135), Expect = 1e-08 Identities = 25/38 (65%), Positives = 29/38 (76%) Frame = -2 Query: 285 NGRLAMLAFLGMSLQAIFTGVGPFQNLLDHLSDPVNNN 172 NGRLAM + G +QAI TG GP +NL DHL+DPVNNN Sbjct: 157 NGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 194
>CB2C_LYCES (P14275) Chlorophyll a-b binding protein 1C, chloroplast precursor| (LHCII type I CAB-1C) (LHCP) (Fragments) Length = 265 Score = 56.6 bits (135), Expect = 1e-08 Identities = 25/38 (65%), Positives = 29/38 (76%) Frame = -2 Query: 285 NGRLAMLAFLGMSLQAIFTGVGPFQNLLDHLSDPVNNN 172 NGRLAM + G +QAI TG GP +NL DHL+DPVNNN Sbjct: 216 NGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 253
>CB2B_LYCES (P07370) Chlorophyll a-b binding protein 1B, chloroplast precursor| (LHCII type I CAB-1B) (LHCP) Length = 265 Score = 56.6 bits (135), Expect = 1e-08 Identities = 25/38 (65%), Positives = 29/38 (76%) Frame = -2 Query: 285 NGRLAMLAFLGMSLQAIFTGVGPFQNLLDHLSDPVNNN 172 NGRLAM + G +QAI TG GP +NL DHL+DPVNNN Sbjct: 216 NGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 253
>CB2A_LYCES (P14274) Chlorophyll a-b binding protein 1A, chloroplast precursor| (LHCII type I CAB-1A) (LHCP) (Fragments) Length = 265 Score = 56.6 bits (135), Expect = 1e-08 Identities = 25/38 (65%), Positives = 29/38 (76%) Frame = -2 Query: 285 NGRLAMLAFLGMSLQAIFTGVGPFQNLLDHLSDPVNNN 172 NGRLAM + G +QAI TG GP +NL DHL+DPVNNN Sbjct: 216 NGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 253
>CB29_MAIZE (P27497) Chlorophyll a-b binding protein M9, chloroplast precursor| (LHCII type I CAB-M9) (LHCP) Length = 265 Score = 56.6 bits (135), Expect = 1e-08 Identities = 25/38 (65%), Positives = 29/38 (76%) Frame = -2 Query: 285 NGRLAMLAFLGMSLQAIFTGVGPFQNLLDHLSDPVNNN 172 NGRLAM + G +QAI TG GP +NL DHL+DPVNNN Sbjct: 216 NGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 253
>CB22_TOBAC (P27493) Chlorophyll a-b binding protein 21, chloroplast precursor| (LHCII type I CAB-21) (LHCP) Length = 265 Score = 56.6 bits (135), Expect = 1e-08 Identities = 25/38 (65%), Positives = 29/38 (76%) Frame = -2 Query: 285 NGRLAMLAFLGMSLQAIFTGVGPFQNLLDHLSDPVNNN 172 NGRLAM + G +QAI TG GP +NL DHL+DPVNNN Sbjct: 216 NGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 253
>CB21_ORYSA (P12330) Chlorophyll a-b binding protein 1, chloroplast precursor| (LHCII type I CAB-1) (LHCP) Length = 265 Score = 56.6 bits (135), Expect = 1e-08 Identities = 25/38 (65%), Positives = 29/38 (76%) Frame = -2 Query: 285 NGRLAMLAFLGMSLQAIFTGVGPFQNLLDHLSDPVNNN 172 NGRLAM + G +QAI TG GP +NL DHL+DPVNNN Sbjct: 216 NGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 253
>CB24_ARATH (P27521) Chlorophyll a-b binding protein 4, chloroplast precursor| (LHCI type III CAB-4) (LHCP) Length = 251 Score = 56.2 bits (134), Expect = 2e-08 Identities = 27/40 (67%), Positives = 31/40 (77%) Frame = -2 Query: 285 NGRLAMLAFLGMSLQAIFTGVGPFQNLLDHLSDPVNNNIL 166 NGRLAMLAFLG +Q TG GPF+NLL HLSDP +N I+ Sbjct: 208 NGRLAMLAFLGFVVQHNVTGKGPFENLLQHLSDPWHNTIV 247
>CB26_ARATH (Q9XF89) Chlorophyll a-b binding protein CP26, chloroplast| precursor (Light-harvesting complex II protein 5) (LHCB5) (LHCIIc) Length = 280 Score = 55.8 bits (133), Expect = 3e-08 Identities = 26/41 (63%), Positives = 29/41 (70%) Frame = -2 Query: 285 NGRLAMLAFLGMSLQAIFTGVGPFQNLLDHLSDPVNNNILT 163 NGRLAM A LG +QA TG GP +NL HLSDP NN+LT Sbjct: 228 NGRLAMFAMLGFFIQAYVTGEGPVENLAKHLSDPFGNNLLT 268
>CB2F_LYCES (P14277) Chlorophyll a-b binding protein 3B, chloroplast precursor| (LHCII type I CAB-3B) (LHCP) (Fragments) Length = 267 Score = 55.8 bits (133), Expect = 3e-08 Identities = 24/38 (63%), Positives = 29/38 (76%) Frame = -2 Query: 285 NGRLAMLAFLGMSLQAIFTGVGPFQNLLDHLSDPVNNN 172 NGRLAM + G +QAI TG GP +NL DH++DPVNNN Sbjct: 218 NGRLAMFSMFGFFVQAIVTGKGPLENLADHIADPVNNN 255
>CB2E_LYCES (P14276) Chlorophyll a-b binding protein 3A, chloroplast precursor| (LHCII type I CAB-3A) (LHCP) (Fragments) Length = 267 Score = 55.8 bits (133), Expect = 3e-08 Identities = 24/38 (63%), Positives = 29/38 (76%) Frame = -2 Query: 285 NGRLAMLAFLGMSLQAIFTGVGPFQNLLDHLSDPVNNN 172 NGRLAM + G +QAI TG GP +NL DH++DPVNNN Sbjct: 218 NGRLAMFSMFGFFVQAIVTGKGPLENLADHIADPVNNN 255
>CB22_PETSP (P04780) Chlorophyll a-b binding protein 22L, chloroplast precursor| (LHCII type I CAB-22L) (LHCP) Length = 267 Score = 55.8 bits (133), Expect = 3e-08 Identities = 25/38 (65%), Positives = 28/38 (73%) Frame = -2 Query: 285 NGRLAMLAFLGMSLQAIFTGVGPFQNLLDHLSDPVNNN 172 NGRLAM + G +QAI TG GP +NL DHL DPVNNN Sbjct: 218 NGRLAMFSMFGFFIQAIVTGKGPLENLADHLVDPVNNN 255
>CB25_NICPL (P12470) Chlorophyll a-b binding protein E, chloroplast precursor| (LHCII type I CAB-E) (LHCP) Length = 266 Score = 55.8 bits (133), Expect = 3e-08 Identities = 24/38 (63%), Positives = 29/38 (76%) Frame = -2 Query: 285 NGRLAMLAFLGMSLQAIFTGVGPFQNLLDHLSDPVNNN 172 NGRLAM + G +QA+ TG GP +NL DHL+DPVNNN Sbjct: 217 NGRLAMFSMFGFFVQALVTGKGPLENLADHLADPVNNN 254
>CB21_MAIZE (P12329) Chlorophyll a-b binding protein 1, chloroplast precursor| (LHCII type I CAB-1) (LHCP) Length = 262 Score = 55.8 bits (133), Expect = 3e-08 Identities = 24/38 (63%), Positives = 29/38 (76%) Frame = -2 Query: 285 NGRLAMLAFLGMSLQAIFTGVGPFQNLLDHLSDPVNNN 172 NGRLAM + G +QAI TG GP +NL DH++DPVNNN Sbjct: 213 NGRLAMFSMFGFFVQAIVTGKGPLENLADHIADPVNNN 250
>CB21_SOYBN (P12471) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) (Fragment) Length = 245 Score = 55.1 bits (131), Expect = 4e-08 Identities = 24/38 (63%), Positives = 29/38 (76%) Frame = -2 Query: 285 NGRLAMLAFLGMSLQAIFTGVGPFQNLLDHLSDPVNNN 172 NGRLAM + G +QAI TG GP +NL DHL++PVNNN Sbjct: 196 NGRLAMFSMFGFFVQAIVTGKGPLENLADHLAEPVNNN 233
>CB22_MAIZE (P06671) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 265 Score = 55.1 bits (131), Expect = 4e-08 Identities = 24/37 (64%), Positives = 29/37 (78%) Frame = -2 Query: 282 GRLAMLAFLGMSLQAIFTGVGPFQNLLDHLSDPVNNN 172 GRLAML+ G +QAI TG GP +NL DH++DPVNNN Sbjct: 217 GRLAMLSMFGFFVQAIVTGKGPLENLADHIADPVNNN 253
>CB21_PEA (P04159) Chlorophyll a-b binding protein AB96 (LHCII type I| CAB-AB96) (LHCP) (Major 15) (Fragment) Length = 228 Score = 54.3 bits (129), Expect = 7e-08 Identities = 24/38 (63%), Positives = 28/38 (73%) Frame = -2 Query: 285 NGRLAMLAFLGMSLQAIFTGVGPFQNLLDHLSDPVNNN 172 NGRLAM + G + AI TG GP +NL DHL+DPVNNN Sbjct: 179 NGRLAMFSMFGFFVPAIVTGKGPLENLADHLADPVNNN 216
>CB23_SOYBN (P09756) Chlorophyll a-b binding protein 3, chloroplast precursor| (LHCII type I CAB-3) (LHCP) Length = 263 Score = 53.9 bits (128), Expect = 1e-07 Identities = 24/38 (63%), Positives = 28/38 (73%) Frame = -2 Query: 285 NGRLAMLAFLGMSLQAIFTGVGPFQNLLDHLSDPVNNN 172 NGRLAM + G +QAI TG GP +NL DHL+ PVNNN Sbjct: 214 NGRLAMFSMFGFFVQAIVTGKGPLENLADHLAGPVNNN 251
>CB21_WHEAT (P04784) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 266 Score = 53.9 bits (128), Expect = 1e-07 Identities = 23/38 (60%), Positives = 29/38 (76%) Frame = -2 Query: 285 NGRLAMLAFLGMSLQAIFTGVGPFQNLLDHLSDPVNNN 172 NGRLAM + G +QAI TG GP ++L DH++DPVNNN Sbjct: 217 NGRLAMFSMFGFFVQAIVTGKGPLEDLADHIADPVNNN 254
>CB21_GOSHI (P27518) Chlorophyll a-b binding protein 151, chloroplast precursor| (LHCII type II CAB-151) (LHCP) Length = 265 Score = 53.9 bits (128), Expect = 1e-07 Identities = 24/38 (63%), Positives = 28/38 (73%) Frame = -2 Query: 285 NGRLAMLAFLGMSLQAIFTGVGPFQNLLDHLSDPVNNN 172 NGRLAM + G +QAI TG GP +NL DHL+DPV NN Sbjct: 216 NGRLAMFSMFGFFVQAIVTGKGPIENLFDHLADPVANN 253
>CB22_PINSY (P15192) Chlorophyll a-b binding protein type 2 member 2| (Chlorophyll a-b binding protein type II 2) (CAB) (LHCP) (Fragment) Length = 150 Score = 53.5 bits (127), Expect = 1e-07 Identities = 24/38 (63%), Positives = 28/38 (73%) Frame = -2 Query: 285 NGRLAMLAFLGMSLQAIFTGVGPFQNLLDHLSDPVNNN 172 NGRLAM + G +QAI TG GP +NL DHL+DPV NN Sbjct: 101 NGRLAMFSMFGFFVQAIVTGKGPIENLYDHLADPVANN 138
>CB23_HORVU (P27523) Chlorophyll a-b binding protein of LHCII type III,| chloroplast precursor (CAB) Length = 268 Score = 53.5 bits (127), Expect = 1e-07 Identities = 24/38 (63%), Positives = 27/38 (71%) Frame = -2 Query: 285 NGRLAMLAFLGMSLQAIFTGVGPFQNLLDHLSDPVNNN 172 NGRLAM + G +QAI TG GP +NL DHL DPV NN Sbjct: 219 NGRLAMFSMFGFFVQAIVTGKGPLENLFDHLDDPVANN 256
>CB21_PINTH (P10049) Chlorophyll a-b binding protein type I, chloroplast| precursor (CAB) (LHCP) Length = 266 Score = 53.5 bits (127), Expect = 1e-07 Identities = 24/38 (63%), Positives = 28/38 (73%) Frame = -2 Query: 285 NGRLAMLAFLGMSLQAIFTGVGPFQNLLDHLSDPVNNN 172 NGRLAM + G +QAI TG GP +NL DHL+DPV NN Sbjct: 217 NGRLAMFSMFGFFVQAIVTGKGPIENLYDHLADPVANN 254
>CB23_PEA (P27520) Chlorophyll a-b binding protein 215, chloroplast precursor| (LHCII type II CAB-215) (LHCP) Length = 265 Score = 53.5 bits (127), Expect = 1e-07 Identities = 24/38 (63%), Positives = 28/38 (73%) Frame = -2 Query: 285 NGRLAMLAFLGMSLQAIFTGVGPFQNLLDHLSDPVNNN 172 NGRLAM + G +QAI TG GP QNL DH++DPV NN Sbjct: 216 NGRLAMFSMFGFFVQAIVTGKGPIQNLYDHVADPVANN 253
>CB23_LYCES (P27489) Chlorophyll a-b binding protein 13, chloroplast precursor| (LHCII type III CAB-13) Length = 265 Score = 53.1 bits (126), Expect = 2e-07 Identities = 24/38 (63%), Positives = 28/38 (73%) Frame = -2 Query: 285 NGRLAMLAFLGMSLQAIFTGVGPFQNLLDHLSDPVNNN 172 NGRLAM + G +QAI TG GP +NLLDHL +PV NN Sbjct: 216 NGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANN 253
>CB2_DUNSA (P20865) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 273 Score = 52.8 bits (125), Expect = 2e-07 Identities = 24/38 (63%), Positives = 28/38 (73%) Frame = -2 Query: 285 NGRLAMLAFLGMSLQAIFTGVGPFQNLLDHLSDPVNNN 172 NGRLAM A LG +QAI TG GP +NL DHL++P NN Sbjct: 225 NGRLAMFACLGFFVQAIVTGKGPIENLTDHLANPAENN 262
>CB23_ORYSA (P27519) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 263 Score = 52.8 bits (125), Expect = 2e-07 Identities = 23/38 (60%), Positives = 28/38 (73%) Frame = -2 Query: 285 NGRLAMLAFLGMSLQAIFTGVGPFQNLLDHLSDPVNNN 172 NGRLAM + G +QAI TG GP +NL DH++DPV NN Sbjct: 214 NGRLAMFSMFGFFVQAIVTGKGPIENLFDHVADPVANN 251
>CB21_LEMGI (P12328) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 264 Score = 52.8 bits (125), Expect = 2e-07 Identities = 23/38 (60%), Positives = 28/38 (73%) Frame = -2 Query: 285 NGRLAMLAFLGMSLQAIFTGVGPFQNLLDHLSDPVNNN 172 NGRLAM + G +QAI TG GP +NL DH++DPV NN Sbjct: 215 NGRLAMFSMFGFFVQAIVTGKGPIENLADHIADPVANN 252
>CB2_PHYPA (P20866) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 269 Score = 52.8 bits (125), Expect = 2e-07 Identities = 24/38 (63%), Positives = 28/38 (73%) Frame = -2 Query: 285 NGRLAMLAFLGMSLQAIFTGVGPFQNLLDHLSDPVNNN 172 NGRLAM + G +QAI TG GP +NL DHL+DPV NN Sbjct: 219 NGRLAMFSMFGFFVQAIVTGKGPLENLNDHLADPVANN 256
>CB23_TOBAC (P27494) Chlorophyll a-b binding protein 36, chloroplast precursor| (LHCII type I CAB-36) (LHCP) Length = 265 Score = 52.8 bits (125), Expect = 2e-07 Identities = 23/38 (60%), Positives = 28/38 (73%) Frame = -2 Query: 285 NGRLAMLAFLGMSLQAIFTGVGPFQNLLDHLSDPVNNN 172 NGRLAM + G +QAI TG GP +NL DH++DPV NN Sbjct: 216 NGRLAMFSMFGFFVQAIVTGKGPIENLFDHVADPVANN 253
>CB2_DUNTE (P27517) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 253 Score = 52.4 bits (124), Expect = 3e-07 Identities = 27/46 (58%), Positives = 32/46 (69%), Gaps = 1/46 (2%) Frame = -2 Query: 285 NGRLAMLAFLGMSLQAIFTGVGPFQNLLDHLSDP-VNNNILTSLKF 151 NGRLAM + LG +QAI TG GP QNL DHL+DP VN ++ KF Sbjct: 204 NGRLAMFSCLGFFVQAIVTGKGPVQNLTDHLADPTVNKAFASATKF 249
>CB25_LYCES (P14279) Chlorophyll a-b binding protein 5, chloroplast precursor| (LHCII type I CAB-5) (LHCP) (Fragment) Length = 237 Score = 52.4 bits (124), Expect = 3e-07 Identities = 23/38 (60%), Positives = 28/38 (73%) Frame = -2 Query: 285 NGRLAMLAFLGMSLQAIFTGVGPFQNLLDHLSDPVNNN 172 NGRLAM + G +QAI TG GP +NL DH++DPV NN Sbjct: 188 NGRLAMFSMFGFFVQAIVTGKGPIENLSDHIADPVANN 225
>CB26_PETSP (P12062) Chlorophyll a-b binding protein 37, chloroplast precursor| (LHCII type I CAB-37) (LHCP) Length = 265 Score = 52.4 bits (124), Expect = 3e-07 Identities = 23/38 (60%), Positives = 28/38 (73%) Frame = -2 Query: 285 NGRLAMLAFLGMSLQAIFTGVGPFQNLLDHLSDPVNNN 172 NGRLAM + G +QAI TG GP +NL DH++DPV NN Sbjct: 216 NGRLAMFSMFGFFVQAIVTGKGPIENLYDHVADPVANN 253
>CB24_LYCES (P14278) Chlorophyll a-b binding protein 4, chloroplast precursor| (LHCII type I CAB-4) (LHCP) Length = 265 Score = 52.4 bits (124), Expect = 3e-07 Identities = 23/38 (60%), Positives = 28/38 (73%) Frame = -2 Query: 285 NGRLAMLAFLGMSLQAIFTGVGPFQNLLDHLSDPVNNN 172 NGRLAM + G +QAI TG GP +NL DH++DPV NN Sbjct: 216 NGRLAMFSMFGFFVQAIVTGKGPIENLSDHINDPVANN 253
>CB2_CHLMO (P22686) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 256 Score = 52.0 bits (123), Expect = 4e-07 Identities = 24/38 (63%), Positives = 27/38 (71%) Frame = -2 Query: 285 NGRLAMLAFLGMSLQAIFTGVGPFQNLLDHLSDPVNNN 172 NGRLAM + G +QAI TG GP QNL DHL+DP NN Sbjct: 207 NGRLAMFSCFGFFVQAIVTGKGPIQNLADHLADPGTNN 244
>CB23_POLMU (P15195) Chlorophyll a-b binding protein type 1 member F3,| chloroplast precursor (DE Chlorophyll a-b binding protein type I F3) (CAB-F3) (LHCP) Length = 265 Score = 51.2 bits (121), Expect = 6e-07 Identities = 23/38 (60%), Positives = 27/38 (71%) Frame = -2 Query: 285 NGRLAMLAFLGMSLQAIFTGVGPFQNLLDHLSDPVNNN 172 NGRLAM + G +QAI TG GP +NL DHL+DP NN Sbjct: 216 NGRLAMFSMFGFFVQAIVTGKGPIENLSDHLADPAVNN 253
>CB21_EUGGR (P12327) Chlorophyll a-b binding protein of LHCII type 1| (Chlorophyll a-b binding protein of LHCII type I) (CAB) (LHCP) (Fragment) Length = 127 Score = 48.1 bits (113), Expect = 5e-06 Identities = 25/43 (58%), Positives = 28/43 (65%) Frame = -2 Query: 285 NGRLAMLAFLGMSLQAIFTGVGPFQNLLDHLSDPVNNNILTSL 157 NGRLAM LG QAI TG GP +N L HL DP +N LT+L Sbjct: 73 NGRLAMSGMLGFYAQAIVTGEGPVENWLYHLQDPSAHNGLTAL 115
>CB2_CHLRE (P14273) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 253 Score = 47.4 bits (111), Expect = 9e-06 Identities = 25/46 (54%), Positives = 30/46 (65%), Gaps = 1/46 (2%) Frame = -2 Query: 285 NGRLAMLAFLGMSLQAIFTGVGPFQNLLDHLSDP-VNNNILTSLKF 151 NGRLA + G +QAI TG GP QNL DHL++P VNN + KF Sbjct: 204 NGRLASFSMFGFFVQAIVTGKGPVQNLDDHLANPTVNNAFAFATKF 249
>CB12_PETHY (P13869) Chlorophyll a-b binding protein, chloroplast precursor| (LHCI type II CAB) Length = 270 Score = 47.4 bits (111), Expect = 9e-06 Identities = 25/61 (40%), Positives = 32/61 (52%) Frame = -2 Query: 342 GFGTXXXXXXXXXXXXXXKNGRLAMLAFLGMSLQAIFTGVGPFQNLLDHLSDPVNNNILT 163 G+G+ KNGRLAMLA +G Q I+TG GP NL HL+DP + I Sbjct: 206 GWGSGSPAKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATIFA 265 Query: 162 S 160 + Sbjct: 266 A 266
>CB12_LYCES (P10708) Chlorophyll a-b binding protein 7, chloroplast precursor| (LHCI type II CAB-7) Length = 270 Score = 47.4 bits (111), Expect = 9e-06 Identities = 25/61 (40%), Positives = 32/61 (52%) Frame = -2 Query: 342 GFGTXXXXXXXXXXXXXXKNGRLAMLAFLGMSLQAIFTGVGPFQNLLDHLSDPVNNNILT 163 G+G+ KNGRLAMLA +G Q I+TG GP NL HL+DP + I Sbjct: 206 GWGSGSPAKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATIFA 265 Query: 162 S 160 + Sbjct: 266 A 266
>CB4A_ARATH (Q07473) Chlorophyll a-b binding protein CP29.1, chloroplast| precursor (LHCII protein 4.1) (LHCB4.1) Length = 290 Score = 46.6 bits (109), Expect = 2e-05 Identities = 21/40 (52%), Positives = 28/40 (70%) Frame = -2 Query: 285 NGRLAMLAFLGMSLQAIFTGVGPFQNLLDHLSDPVNNNIL 166 + RLAM+AFLG ++QA TG GP N HLSDP++ I+ Sbjct: 245 HARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTII 284
>CB11_LYCES (P12360) Chlorophyll a-b binding protein 6A, chloroplast precursor| (LHCI type I CAB-6A) (Light-harvesting complex I 26 kDa protein) Length = 246 Score = 45.4 bits (106), Expect = 3e-05 Identities = 21/40 (52%), Positives = 29/40 (72%), Gaps = 1/40 (2%) Frame = -2 Query: 285 NGRLAMLAFLGMSLQ-AIFTGVGPFQNLLDHLSDPVNNNI 169 NGRLA+LA +G +Q + + G GP +NL HL+DP +NNI Sbjct: 195 NGRLALLAIVGFCVQQSAYLGTGPLENLATHLADPWHNNI 234
>LH15_EUGGR (P08975) Light-harvesting complex I LH35 proteins precursor| [Contains: LH35 protein 1; LH35 protein 2] (Fragment) Length = 331 Score = 45.1 bits (105), Expect = 4e-05 Identities = 21/43 (48%), Positives = 27/43 (62%) Frame = -2 Query: 285 NGRLAMLAFLGMSLQAIFTGVGPFQNLLDHLSDPVNNNILTSL 157 NGRLAM LG++ Q + TG P NL H ++PV NI T+L Sbjct: 288 NGRLAMTGLLGLTFQYLATGESPLANLAAHFANPVGANITTTL 330 Score = 40.4 bits (93), Expect = 0.001 Identities = 19/43 (44%), Positives = 26/43 (60%) Frame = -2 Query: 285 NGRLAMLAFLGMSLQAIFTGVGPFQNLLDHLSDPVNNNILTSL 157 NGRLAM+ G+ +Q T GP NL++HL P+ NI +L Sbjct: 100 NGRLAMIGMFGLEVQNHVTAQGPVANLIEHLRHPLAANIGANL 142
>CB4B_ARATH (Q9XF88) Chlorophyll a-b binding protein CP29.2, chloroplast| precursor (LHCII protein 4.2) (LHCB4.2) Length = 287 Score = 45.1 bits (105), Expect = 4e-05 Identities = 20/40 (50%), Positives = 27/40 (67%) Frame = -2 Query: 285 NGRLAMLAFLGMSLQAIFTGVGPFQNLLDHLSDPVNNNIL 166 + RLAM+ FLG ++QA TG GP N HLSDP++ I+ Sbjct: 242 HARLAMVGFLGFAVQAAATGKGPLNNWATHLSDPLHTTII 281
>LH18_EUGGR (P08976) Light-harvesting complex I LH38 proteins precursor| [Contains: LH38 protein 1; LH38 protein 2; LH38 protein 3] (Fragment) Length = 530 Score = 43.5 bits (101), Expect = 1e-04 Identities = 20/43 (46%), Positives = 28/43 (65%) Frame = -2 Query: 285 NGRLAMLAFLGMSLQAIFTGVGPFQNLLDHLSDPVNNNILTSL 157 NGRLA+ A G++ Q + TG P NL HL++P+ NI T+L Sbjct: 317 NGRLALTAVAGLTAQYLATGESPLANLSAHLANPIGANITTNL 359 Score = 41.2 bits (95), Expect = 6e-04 Identities = 19/43 (44%), Positives = 24/43 (55%) Frame = -2 Query: 285 NGRLAMLAFLGMSLQAIFTGVGPFQNLLDHLSDPVNNNILTSL 157 NGRLA+ A LG +Q G P NL +HL P+ NI S+ Sbjct: 129 NGRLALTALLGFEVQRHVVGGSPLANLAEHLQQPLQRNIADSI 171 Score = 32.3 bits (72), Expect = 0.30 Identities = 14/29 (48%), Positives = 18/29 (62%) Frame = -2 Query: 285 NGRLAMLAFLGMSLQAIFTGVGPFQNLLD 199 NGRLAM G+ +Q+ TG P NL+D Sbjct: 502 NGRLAMNGMFGLEVQSHVTGKSPINNLID 530
>CB2_MALDO (P15773) Chlorophyll a-b binding protein AB10, chloroplast| precursor (LHCII type I CAB-AB10) (LHCP) Length = 268 Score = 40.8 bits (94), Expect = 8e-04 Identities = 20/43 (46%), Positives = 27/43 (62%) Frame = -2 Query: 285 NGRLAMLAFLGMSLQAIFTGVGPFQNLLDHLSDPVNNNILTSL 157 NGRLAM + G +QAI + +NL DHL VNNN L+++ Sbjct: 219 NGRLAMFSMFGFFVQAIVSRKDRLENLADHLGWTVNNNALSNV 261
>CB4C_ARATH (Q9S7W1) Chlorophyll a-b binding protein CP29.3, chloroplast| precursor (LHCII protein 4.3) (LHCB4.3) Length = 276 Score = 32.0 bits (71), Expect = 0.39 Identities = 15/23 (65%), Positives = 18/23 (78%) Frame = -2 Query: 285 NGRLAMLAFLGMSLQAIFTGVGP 217 + RLAM+AFL +LQA FTG GP Sbjct: 245 HSRLAMVAFLIFALQAAFTGKGP 267
>CB29_CHLRE (Q93WD2) Chlorophyll a-b binding protein CP29| Length = 279 Score = 28.9 bits (63), Expect = 3.3 Identities = 15/37 (40%), Positives = 23/37 (62%) Frame = -2 Query: 285 NGRLAMLAFLGMSLQAIFTGVGPFQNLLDHLSDPVNN 175 + RLAM++F G +QA+ TG G +L +D +NN Sbjct: 240 HARLAMVSFFGYGVQALSTGEGALGSLA-KFADGLNN 275
>HEMH_SYNEL (Q8DGU6) Ferrochelatase (EC 4.99.1.1) (Protoheme ferro-lyase) (Heme| synthetase) Length = 388 Score = 27.7 bits (60), Expect = 7.4 Identities = 14/27 (51%), Positives = 18/27 (66%) Frame = -2 Query: 285 NGRLAMLAFLGMSLQAIFTGVGPFQNL 205 NGRLAML FL + ++ I +G GP L Sbjct: 360 NGRLAMLGFLALMIELI-SGQGPLHML 385 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 39,498,480 Number of Sequences: 219361 Number of extensions: 615584 Number of successful extensions: 1822 Number of sequences better than 10.0: 77 Number of HSP's better than 10.0 without gapping: 1792 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1822 length of database: 80,573,946 effective HSP length: 89 effective length of database: 61,050,817 effective search space used: 1465219608 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
