| Clone Name | rbaal16f21 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AF161719.1|AF161719 Triticum aestivum vacuolar targeting receptor bp-80 mRNA, complete cds Length = 2293 Score = 389 bits (196), Expect = e-105 Identities = 225/236 (95%) Strand = Plus / Minus Query: 214 gtgccatctggtctcagatatcaccagcatgcgccacatgctgttgctggtttgcacctt 273 |||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||| Sbjct: 1948 gtgccatctggtctcagatatcaccagcatgcgcgacatgctgttgctggtttgcgcctt 1889 Query: 274 cttggctgtccaaaggcatgtactgagccatgatggcgcggatctccgaatccatgtagc 333 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 1888 cttggctgtccaaaggcatgtactgagccatgatggcgcggatctccgaatccatgtaac 1829 Query: 334 tccgtagcctgtatttgtatactgcatatgctccgaccccggcaaatacaagtccaaana 393 ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| || | Sbjct: 1828 tccgtagcctgtatttgtacactgcatatgctccgaccccggcaaatacaagtccgaaga 1769 Query: 394 aaataacccacatgaagctccacccgactgangaggcannttgcttgctgatgcac 449 |||||||||||||||||||||| |||||||| |||||| ||| |||||||||||| Sbjct: 1768 aaataacccacatgaagctccagccgactgaggaggcagcttgtttgctgatgcac 1713 Score = 155 bits (78), Expect = 1e-34 Identities = 121/134 (90%), Gaps = 6/134 (4%) Strand = Plus / Minus Query: 59 gacaatatc-gcctatgctgttcatcgtgtctcacaaaatgaaggtgcacaacagtgtaa 117 ||||||||| |||||||||| ||||| ||||||||||||||||| ||||||||| |||| Sbjct: 2129 gacaatatccgcctatgctgggcatcgggtctcacaaaatgaaggggcacaacagggtaa 2070 Query: 118 ctcctagaatcatacatcaaatctcctcgcgtacaaattgtatcttt-----gcgctgta 172 ||||||||||||||||||||||||||||||||||||| |||||||| |||||||| Sbjct: 2069 ctcctagaatcatacatcaaatctcctcgcgtacaaaccgtatctttgcttcgcgctgta 2010 Query: 173 aagccgacgccacc 186 |||||||||||||| Sbjct: 2009 aagccgacgccacc 1996 Score = 58.0 bits (29), Expect = 3e-05 Identities = 36/39 (92%) Strand = Plus / Minus Query: 19 acgtncgtagtatgcaagnagtctagagccgacaaaggg 57 |||| |||||||||||| |||||||||||||||||||| Sbjct: 2182 acgttcgtagtatgcaatgagtctagagccgacaaaggg 2144
>gb|AY105262.1| Zea mays PCO087823 mRNA sequence Length = 1974 Score = 188 bits (95), Expect = 1e-44 Identities = 142/158 (89%) Strand = Plus / Minus Query: 258 tgctggtttgcaccttcttggctgtccaaaggcatgtactgagccatgatggcgcggatc 317 ||||||||||| ||||||||| | |||| |||||||||||||||||||||||| |||||| Sbjct: 1523 tgctggtttgctccttcttggttatccagaggcatgtactgagccatgatggcacggatc 1464 Query: 318 tccgaatccatgtagctccgtagcctgtatttgtatactgcatatgctccgaccccggca 377 || ||||||||||| ||||| |||||||||||||| || || |||||||| ||||||||| Sbjct: 1463 tctgaatccatgtaactccgcagcctgtatttgtacacagcgtatgctccaaccccggca 1404 Query: 378 aatacaagtccaaanaaaataacccacatgaagctcca 415 || ||||||||||| ||||||||||| | ||||||||| Sbjct: 1403 aaaacaagtccaaagaaaataacccagaggaagctcca 1366
>dbj|AK121413.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023133A05, full insert sequence Length = 2546 Score = 182 bits (92), Expect = 7e-43 Identities = 153/173 (88%), Gaps = 3/173 (1%) Strand = Plus / Minus Query: 233 atcaccagcatgcgccacatgctgttgctggtttgcaccttcttggctgtccaaaggcat 292 ||||||||||||||| ||||| ||||| ||| || |||||||| | ||||||||||| Sbjct: 2174 atcaccagcatgcgcgacatgatgttg---gttagctgcttcttggttatccaaaggcat 2118 Query: 293 gtactgagccatgatggcgcggatctccgaatccatgtagctccgtagcctgtatttgta 352 |||||| |||||||| ||||| ||||||||||||||||||||||||||||||||||| || Sbjct: 2117 gtactgggccatgatcgcgcgaatctccgaatccatgtagctccgtagcctgtatttata 2058 Query: 353 tactgcatatgctccgaccccggcaaatacaagtccaaanaaaataacccaca 405 || ||||||||||||||||| |||| ||||||||||| ||||||||||||| Sbjct: 2057 caccgcatatgctccgaccccagcaagaacaagtccaaagaaaataacccaca 2005
>dbj|AK111509.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001G14, full insert sequence Length = 2546 Score = 182 bits (92), Expect = 7e-43 Identities = 153/173 (88%), Gaps = 3/173 (1%) Strand = Plus / Minus Query: 233 atcaccagcatgcgccacatgctgttgctggtttgcaccttcttggctgtccaaaggcat 292 ||||||||||||||| ||||| ||||| ||| || |||||||| | ||||||||||| Sbjct: 2174 atcaccagcatgcgcgacatgatgttg---gttagctgcttcttggttatccaaaggcat 2118 Query: 293 gtactgagccatgatggcgcggatctccgaatccatgtagctccgtagcctgtatttgta 352 |||||| |||||||| ||||| ||||||||||||||||||||||||||||||||||| || Sbjct: 2117 gtactgggccatgatcgcgcgaatctccgaatccatgtagctccgtagcctgtatttata 2058 Query: 353 tactgcatatgctccgaccccggcaaatacaagtccaaanaaaataacccaca 405 || ||||||||||||||||| |||| ||||||||||| ||||||||||||| Sbjct: 2057 caccgcatatgctccgaccccagcaagaacaagtccaaagaaaataacccaca 2005
>dbj|AK098891.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001M02, full insert sequence Length = 2508 Score = 182 bits (92), Expect = 7e-43 Identities = 153/173 (88%), Gaps = 3/173 (1%) Strand = Plus / Minus Query: 233 atcaccagcatgcgccacatgctgttgctggtttgcaccttcttggctgtccaaaggcat 292 ||||||||||||||| ||||| ||||| ||| || |||||||| | ||||||||||| Sbjct: 2137 atcaccagcatgcgcgacatgatgttg---gttagctgcttcttggttatccaaaggcat 2081 Query: 293 gtactgagccatgatggcgcggatctccgaatccatgtagctccgtagcctgtatttgta 352 |||||| |||||||| ||||| ||||||||||||||||||||||||||||||||||| || Sbjct: 2080 gtactgggccatgatcgcgcgaatctccgaatccatgtagctccgtagcctgtatttata 2021 Query: 353 tactgcatatgctccgaccccggcaaatacaagtccaaanaaaataacccaca 405 || ||||||||||||||||| |||| ||||||||||| ||||||||||||| Sbjct: 2020 caccgcatatgctccgaccccagcaagaacaagtccaaagaaaataacccaca 1968
>dbj|AK098846.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000C17, full insert sequence Length = 2527 Score = 182 bits (92), Expect = 7e-43 Identities = 153/173 (88%), Gaps = 3/173 (1%) Strand = Plus / Minus Query: 233 atcaccagcatgcgccacatgctgttgctggtttgcaccttcttggctgtccaaaggcat 292 ||||||||||||||| ||||| ||||| ||| || |||||||| | ||||||||||| Sbjct: 2126 atcaccagcatgcgcgacatgatgttg---gttagctgcttcttggttatccaaaggcat 2070 Query: 293 gtactgagccatgatggcgcggatctccgaatccatgtagctccgtagcctgtatttgta 352 |||||| |||||||| ||||| ||||||||||||||||||||||||||||||||||| || Sbjct: 2069 gtactgggccatgatcgcgcgaatctccgaatccatgtagctccgtagcctgtatttata 2010 Query: 353 tactgcatatgctccgaccccggcaaatacaagtccaaanaaaataacccaca 405 || ||||||||||||||||| |||| ||||||||||| ||||||||||||| Sbjct: 2009 caccgcatatgctccgaccccagcaagaacaagtccaaagaaaataacccaca 1957
>gb|U79961.1|ZMU79961 Zea mays vacuolar sorting receptor homolog mRNA, partial cds Length = 822 Score = 180 bits (91), Expect = 3e-42 Identities = 141/158 (89%) Strand = Plus / Minus Query: 258 tgctggtttgcaccttcttggctgtccaaaggcatgtactgagccatgatggcgcggatc 317 ||||||||||| ||| ||||| | |||| |||||||||||||||||||||||| |||||| Sbjct: 431 tgctggtttgctcctacttggttatccagaggcatgtactgagccatgatggcacggatc 372 Query: 318 tccgaatccatgtagctccgtagcctgtatttgtatactgcatatgctccgaccccggca 377 || ||||||||||| ||||| |||||||||||||| || || |||||||| ||||||||| Sbjct: 371 tctgaatccatgtaactccgcagcctgtatttgtacacagcgtatgctccaaccccggca 312 Query: 378 aatacaagtccaaanaaaataacccacatgaagctcca 415 || ||||||||||| ||||||||||| | ||||||||| Sbjct: 311 aaaacaagtccaaagaaaataacccagaggaagctcca 274
>gb|BT017302.1| Zea mays clone EL01N0316C05.c mRNA sequence Length = 622 Score = 109 bits (55), Expect = 8e-21 Identities = 73/79 (92%) Strand = Plus / Minus Query: 274 cttggctgtccaaaggcatgtactgagccatgatggcgcggatctccgaatccatgtagc 333 ||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||| | Sbjct: 260 cttggctgtccaaaggcatgtactgggccatgatggcgcggatctccgagtccatgtacc 201 Query: 334 tccgtagcctgtatttgta 352 |||| | |||||| ||||| Sbjct: 200 tccggatcctgtacttgta 182
>gb|AY104972.1| Zea mays PCO068557 mRNA sequence Length = 1725 Score = 101 bits (51), Expect = 2e-18 Identities = 72/79 (91%) Strand = Plus / Minus Query: 274 cttggctgtccaaaggcatgtactgagccatgatggcgcggatctccgaatccatgtagc 333 |||||||||||| |||||||||||| ||||||||||||||||||||||| |||||||| | Sbjct: 1524 cttggctgtccagaggcatgtactgggccatgatggcgcggatctccgagtccatgtacc 1465 Query: 334 tccgtagcctgtatttgta 352 |||| | |||||| ||||| Sbjct: 1464 tccggatcctgtacttgta 1446
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 97.6 bits (49), Expect = 3e-17 Identities = 90/103 (87%), Gaps = 3/103 (2%) Strand = Plus / Minus Query: 233 atcaccagcatgcgccacatgctgttgctggtttgcaccttcttggctgtccaaaggcat 292 ||||||||||||||| ||||| ||||| ||| || |||||||| | ||||||||||| Sbjct: 12381197 atcaccagcatgcgcgacatgatgttg---gttagctgcttcttggttatccaaaggcat 12381141 Query: 293 gtactgagccatgatggcgcggatctccgaatccatgtagctc 335 |||||| |||||||| ||||| ||||||||||||||||||||| Sbjct: 12381140 gtactgggccatgatcgcgcgaatctccgaatccatgtagctc 12381098 Score = 87.7 bits (44), Expect = 3e-14 Identities = 64/71 (90%) Strand = Plus / Minus Query: 335 ccgtagcctgtatttgtatactgcatatgctccgaccccggcaaatacaagtccaaanaa 394 ||||||||||||||| || || ||||||||||||||||| |||| ||||||||||| || Sbjct: 12380974 ccgtagcctgtatttatacaccgcatatgctccgaccccagcaagaacaagtccaaagaa 12380915 Query: 395 aataacccaca 405 ||||||||||| Sbjct: 12380914 aataacccaca 12380904
>gb|AC125496.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0098H14, complete sequence Length = 132560 Score = 97.6 bits (49), Expect = 3e-17 Identities = 90/103 (87%), Gaps = 3/103 (2%) Strand = Plus / Minus Query: 233 atcaccagcatgcgccacatgctgttgctggtttgcaccttcttggctgtccaaaggcat 292 ||||||||||||||| ||||| ||||| ||| || |||||||| | ||||||||||| Sbjct: 40215 atcaccagcatgcgcgacatgatgttg---gttagctgcttcttggttatccaaaggcat 40159 Query: 293 gtactgagccatgatggcgcggatctccgaatccatgtagctc 335 |||||| |||||||| ||||| ||||||||||||||||||||| Sbjct: 40158 gtactgggccatgatcgcgcgaatctccgaatccatgtagctc 40116 Score = 87.7 bits (44), Expect = 3e-14 Identities = 64/71 (90%) Strand = Plus / Minus Query: 335 ccgtagcctgtatttgtatactgcatatgctccgaccccggcaaatacaagtccaaanaa 394 ||||||||||||||| || || ||||||||||||||||| |||| ||||||||||| || Sbjct: 39992 ccgtagcctgtatttatacaccgcatatgctccgaccccagcaagaacaagtccaaagaa 39933 Query: 395 aataacccaca 405 ||||||||||| Sbjct: 39932 aataacccaca 39922
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 97.6 bits (49), Expect = 3e-17 Identities = 90/103 (87%), Gaps = 3/103 (2%) Strand = Plus / Minus Query: 233 atcaccagcatgcgccacatgctgttgctggtttgcaccttcttggctgtccaaaggcat 292 ||||||||||||||| ||||| ||||| ||| || |||||||| | ||||||||||| Sbjct: 12377960 atcaccagcatgcgcgacatgatgttg---gttagctgcttcttggttatccaaaggcat 12377904 Query: 293 gtactgagccatgatggcgcggatctccgaatccatgtagctc 335 |||||| |||||||| ||||| ||||||||||||||||||||| Sbjct: 12377903 gtactgggccatgatcgcgcgaatctccgaatccatgtagctc 12377861 Score = 87.7 bits (44), Expect = 3e-14 Identities = 64/71 (90%) Strand = Plus / Minus Query: 335 ccgtagcctgtatttgtatactgcatatgctccgaccccggcaaatacaagtccaaanaa 394 ||||||||||||||| || || ||||||||||||||||| |||| ||||||||||| || Sbjct: 12377737 ccgtagcctgtatttatacaccgcatatgctccgaccccagcaagaacaagtccaaagaa 12377678 Query: 395 aataacccaca 405 ||||||||||| Sbjct: 12377677 aataacccaca 12377667
>dbj|AK102691.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033103D10, full insert sequence Length = 2549 Score = 97.6 bits (49), Expect = 3e-17 Identities = 76/85 (89%) Strand = Plus / Minus Query: 274 cttggctgtccaaaggcatgtactgagccatgatggcgcggatctccgaatccatgtagc 333 ||||| |||||| ||||||||||| |||||||||||||||||||| ||||||||||| | Sbjct: 2089 cttggttgtccaggggcatgtactgggccatgatggcgcggatctctgaatccatgtacc 2030 Query: 334 tccgtagcctgtatttgtatactgc 358 |||| | |||||| ||||||||||| Sbjct: 2029 tccggatcctgtacttgtatactgc 2005
>dbj|AK066617.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013073B02, full insert sequence Length = 2553 Score = 97.6 bits (49), Expect = 3e-17 Identities = 76/85 (89%) Strand = Plus / Minus Query: 274 cttggctgtccaaaggcatgtactgagccatgatggcgcggatctccgaatccatgtagc 333 ||||| |||||| ||||||||||| |||||||||||||||||||| ||||||||||| | Sbjct: 2150 cttggttgtccaggggcatgtactgggccatgatggcgcggatctctgaatccatgtacc 2091 Query: 334 tccgtagcctgtatttgtatactgc 358 |||| | |||||| ||||||||||| Sbjct: 2090 tccggatcctgtacttgtatactgc 2066
>ref|XM_479541.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2450 Score = 95.6 bits (48), Expect = 1e-16 Identities = 72/80 (90%) Strand = Plus / Minus Query: 288 ggcatgtactgagccatgatggcgcggatctccgaatccatgtagctccgtagcctgtat 347 |||||||||||||||||||| || || ||||| ||||||||||| |||||||||| ||| Sbjct: 2019 ggcatgtactgagccatgatcgcacgaatctctgaatccatgtaactccgtagccgatat 1960 Query: 348 ttgtatactgcatatgctcc 367 |||||||| ||||||||||| Sbjct: 1959 ttgtatacggcatatgctcc 1940
>dbj|AK072667.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023134F15, full insert sequence Length = 2450 Score = 95.6 bits (48), Expect = 1e-16 Identities = 72/80 (90%) Strand = Plus / Minus Query: 288 ggcatgtactgagccatgatggcgcggatctccgaatccatgtagctccgtagcctgtat 347 |||||||||||||||||||| || || ||||| ||||||||||| |||||||||| ||| Sbjct: 2019 ggcatgtactgagccatgatcgcacgaatctctgaatccatgtaactccgtagccgatat 1960 Query: 348 ttgtatactgcatatgctcc 367 |||||||| ||||||||||| Sbjct: 1959 ttgtatacggcatatgctcc 1940
>gb|AY110802.1| Zea mays CL50258_1 mRNA sequence Length = 661 Score = 89.7 bits (45), Expect = 7e-15 Identities = 78/89 (87%) Strand = Plus / Plus Query: 274 cttggctgtccaaaggcatgtactgagccatgatggcgcggatctccgaatccatgtagc 333 ||||| |||||| ||||||||||||||||||||||| |||||||| || |||||||| | Sbjct: 261 cttggttgtccaggggcatgtactgagccatgatggcacggatctcggagtccatgtacc 320 Query: 334 tccgtagcctgtatttgtatactgcatat 362 |||| | |||||| ||||| ||||||||| Sbjct: 321 tccggatcctgtacttgtacactgcatat 349
>gb|AC123514.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0004B05, complete sequence Length = 121223 Score = 75.8 bits (38), Expect = 1e-10 Identities = 53/58 (91%) Strand = Plus / Plus Query: 274 cttggctgtccaaaggcatgtactgagccatgatggcgcggatctccgaatccatgta 331 ||||| |||||| ||||||||||| |||||||||||||||||||| ||||||||||| Sbjct: 20554 cttggttgtccaggggcatgtactgggccatgatggcgcggatctctgaatccatgta 20611
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 75.8 bits (38), Expect = 1e-10 Identities = 53/58 (91%) Strand = Plus / Plus Query: 274 cttggctgtccaaaggcatgtactgagccatgatggcgcggatctccgaatccatgta 331 ||||| |||||| ||||||||||| |||||||||||||||||||| ||||||||||| Sbjct: 783000 cttggttgtccaggggcatgtactgggccatgatggcgcggatctctgaatccatgta 783057
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 75.8 bits (38), Expect = 1e-10 Identities = 53/58 (91%) Strand = Plus / Plus Query: 274 cttggctgtccaaaggcatgtactgagccatgatggcgcggatctccgaatccatgta 331 ||||| |||||| ||||||||||| |||||||||||||||||||| ||||||||||| Sbjct: 742261 cttggttgtccaggggcatgtactgggccatgatggcgcggatctctgaatccatgta 742318
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 75.8 bits (38), Expect = 1e-10 Identities = 53/58 (91%) Strand = Plus / Plus Query: 274 cttggctgtccaaaggcatgtactgagccatgatggcgcggatctccgaatccatgta 331 ||||| |||||| ||||||||||| |||||||||||||||||||| ||||||||||| Sbjct: 742263 cttggttgtccaggggcatgtactgggccatgatggcgcggatctctgaatccatgta 742320
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 75.8 bits (38), Expect = 1e-10 Identities = 53/58 (91%) Strand = Plus / Plus Query: 274 cttggctgtccaaaggcatgtactgagccatgatggcgcggatctccgaatccatgta 331 ||||| |||||| ||||||||||| |||||||||||||||||||| ||||||||||| Sbjct: 783000 cttggttgtccaggggcatgtactgggccatgatggcgcggatctctgaatccatgta 783057
>emb|BX842244.3|CNS0B0PN Oryza sativa chromosome 12, . Partial sequence from BAC OSJNBb0006G23 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 12281 Score = 75.8 bits (38), Expect = 1e-10 Identities = 53/58 (91%) Strand = Plus / Plus Query: 274 cttggctgtccaaaggcatgtactgagccatgatggcgcggatctccgaatccatgta 331 ||||| |||||| ||||||||||| |||||||||||||||||||| ||||||||||| Sbjct: 4772 cttggttgtccaggggcatgtactgggccatgatggcgcggatctctgaatccatgta 4829
>emb|BX000512.1|CNS08CE2 Oryza sativa chromosome 11, . BAC OSJNBa0025K19 of library OSJNBa from chromosome 11 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 181322 Score = 75.8 bits (38), Expect = 1e-10 Identities = 53/58 (91%) Strand = Plus / Minus Query: 274 cttggctgtccaaaggcatgtactgagccatgatggcgcggatctccgaatccatgta 331 ||||| |||||| ||||||||||| |||||||||||||||||||| ||||||||||| Sbjct: 711 cttggttgtccaggggcatgtactgggccatgatggcgcggatctctgaatccatgta 654
>dbj|AB006809.1| Cucurbita cv. Kurokawa Amakuri mRNA for PV72, complete cds Length = 2190 Score = 73.8 bits (37), Expect = 4e-10 Identities = 76/89 (85%) Strand = Plus / Minus Query: 274 cttggctgtccaaaggcatgtactgagccatgatggcgcggatctccgaatccatgtagc 333 ||||| ||||||| ||||| || |||||||||||||| || |||||||||||||| || | Sbjct: 1875 cttggttgtccaagggcatatattgagccatgatggcccgtatctccgaatccatatacc 1816 Query: 334 tccgtagcctgtatttgtatactgcatat 362 |||| | ||||||||||| | ||||||| Sbjct: 1815 tccggattctgtatttgtaaattgcatat 1787
>ref|NM_179624.1| Arabidopsis thaliana calcium ion binding / peptidase AT2G14740 transcript variant AT2G14740.2 mRNA, complete cds Length = 2080 Score = 60.0 bits (30), Expect = 7e-06 Identities = 66/78 (84%) Strand = Plus / Minus Query: 275 ttggctgtccaaaggcatgtactgagccatgatggcgcggatctccgaatccatgtagct 334 |||||||||||| ||||||||||| ||||| ||||| | |||||| || |||||||| Sbjct: 1848 ttggctgtccaatggcatgtactgtgccattatggctctgatctctgagtccatgtattg 1789 Query: 335 ccgtagcctgtatttgta 352 || |||||| |||||||| Sbjct: 1788 ccttagcctatatttgta 1771
>ref|NM_127038.1| Arabidopsis thaliana calcium ion binding / peptidase AT2G14740 transcript variant AT2G14740.1 mRNA, complete cds Length = 2173 Score = 60.0 bits (30), Expect = 7e-06 Identities = 66/78 (84%) Strand = Plus / Minus Query: 275 ttggctgtccaaaggcatgtactgagccatgatggcgcggatctccgaatccatgtagct 334 |||||||||||| ||||||||||| ||||| ||||| | |||||| || |||||||| Sbjct: 1848 ttggctgtccaatggcatgtactgtgccattatggctctgatctctgagtccatgtattg 1789 Query: 335 ccgtagcctgtatttgta 352 || |||||| |||||||| Sbjct: 1788 ccttagcctatatttgta 1771
>gb|AC005398.3| Arabidopsis thaliana chromosome 2 clone T6B13 map mi398, complete sequence Length = 92524 Score = 58.0 bits (29), Expect = 3e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 275 ttggctgtccaaaggcatgtactgagccatgatggcgcggatctccgaatccatgta 331 |||||||||||| ||||||||||| ||||| ||||| | |||||| || |||||||| Sbjct: 2616 ttggctgtccaatggcatgtactgtgccattatggctctgatctctgagtccatgta 2672 Score = 50.1 bits (25), Expect = 0.006 Identities = 49/57 (85%) Strand = Plus / Minus Query: 275 ttggctgtccaaaggcatgtactgagccatgatggcgcggatctccgaatccatgta 331 ||||||||||| ||||||||||| ||||| ||||| | |||||| || |||||||| Sbjct: 13963 ttggctgtccagtggcatgtactgtgccattatggctctgatctctgagtccatgta 13907
>gb|AC004705.3| Arabidopsis thaliana chromosome 2 clone F26C24 map mi398, complete sequence Length = 89840 Score = 58.0 bits (29), Expect = 3e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 275 ttggctgtccaaaggcatgtactgagccatgatggcgcggatctccgaatccatgta 331 |||||||||||| ||||||||||| ||||| ||||| | |||||| || |||||||| Sbjct: 75988 ttggctgtccaatggcatgtactgtgccattatggctctgatctctgagtccatgta 76044 Score = 50.1 bits (25), Expect = 0.006 Identities = 49/57 (85%) Strand = Plus / Minus Query: 275 ttggctgtccaaaggcatgtactgagccatgatggcgcggatctccgaatccatgta 331 ||||||||||| ||||||||||| ||||| ||||| | |||||| || |||||||| Sbjct: 87335 ttggctgtccagtggcatgtactgtgccattatggctctgatctctgagtccatgta 87279
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 288 ggcatgtactgagccatgatggcgcggatctccgaatccatgta 331 |||||||||||||||||||| || || ||||| ||||||||||| Sbjct: 28756389 ggcatgtactgagccatgatcgcacgaatctctgaatccatgta 28756432 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Plus Query: 335 ccgtagcctgtatttgtatactgcatatgctcc 367 |||||||| ||||||||||| ||||||||||| Sbjct: 28756558 ccgtagccgatatttgtatacggcatatgctcc 28756590
>dbj|AP005243.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1205_F02 Length = 112862 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 288 ggcatgtactgagccatgatggcgcggatctccgaatccatgta 331 |||||||||||||||||||| || || ||||| ||||||||||| Sbjct: 63950 ggcatgtactgagccatgatcgcacgaatctctgaatccatgta 63993 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Plus Query: 335 ccgtagcctgtatttgtatactgcatatgctcc 367 |||||||| ||||||||||| ||||||||||| Sbjct: 64119 ccgtagccgatatttgtatacggcatatgctcc 64151
>dbj|AP005099.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0008J01 Length = 159900 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 288 ggcatgtactgagccatgatggcgcggatctccgaatccatgta 331 |||||||||||||||||||| || || ||||| ||||||||||| Sbjct: 14075 ggcatgtactgagccatgatcgcacgaatctctgaatccatgta 14118 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Plus Query: 335 ccgtagcctgtatttgtatactgcatatgctcc 367 |||||||| ||||||||||| ||||||||||| Sbjct: 14244 ccgtagccgatatttgtatacggcatatgctcc 14276
>dbj|AP006374.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT47L09, TM0218, complete sequence Length = 113213 Score = 54.0 bits (27), Expect = 4e-04 Identities = 48/55 (87%) Strand = Plus / Minus Query: 274 cttggctgtccaaaggcatgtactgagccatgatggcgcggatctccgaatccat 328 |||| |||||||| ||||||||||| ||||||||||| | ||| || |||||||| Sbjct: 50893 cttgactgtccaagggcatgtactgtgccatgatggctctgatttctgaatccat 50839
>gb|AY017377.1| Physcomitrella patens EGF receptor-like protein (ELP) mRNA, partial cds Length = 1543 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Minus Query: 282 tccaaaggcatgtactgagccatgatggcgcggatctccgaatccatgta 331 ||||| ||||||||||||||||| || || || ||||| ||||||||||| Sbjct: 1035 tccaacggcatgtactgagccataatcgctcgaatctctgaatccatgta 986
>ref|NM_179623.1| Arabidopsis thaliana VSR-2; calcium ion binding / peptidase AT2G14720 (VSR-2) transcript variant AT2G14720.2 mRNA, complete cds Length = 2325 Score = 50.1 bits (25), Expect = 0.006 Identities = 49/57 (85%) Strand = Plus / Minus Query: 275 ttggctgtccaaaggcatgtactgagccatgatggcgcggatctccgaatccatgta 331 ||||||||||| ||||||||||| ||||| ||||| | |||||| || |||||||| Sbjct: 1969 ttggctgtccagtggcatgtactgtgccattatggctctgatctctgagtccatgta 1913
>ref|NM_127036.3| Arabidopsis thaliana VSR-2; calcium ion binding / peptidase AT2G14720 (VSR-2) transcript variant AT2G14720.1 mRNA, complete cds Length = 2371 Score = 50.1 bits (25), Expect = 0.006 Identities = 49/57 (85%) Strand = Plus / Minus Query: 275 ttggctgtccaaaggcatgtactgagccatgatggcgcggatctccgaatccatgta 331 ||||||||||| ||||||||||| ||||| ||||| | |||||| || |||||||| Sbjct: 2015 ttggctgtccagtggcatgtactgtgccattatggctctgatctctgagtccatgta 1959
>gb|BT008390.1| Arabidopsis thaliana At2g14720 gene, complete cds Length = 1887 Score = 50.1 bits (25), Expect = 0.006 Identities = 49/57 (85%) Strand = Plus / Minus Query: 275 ttggctgtccaaaggcatgtactgagccatgatggcgcggatctccgaatccatgta 331 ||||||||||| ||||||||||| ||||| ||||| | |||||| || |||||||| Sbjct: 1848 ttggctgtccagtggcatgtactgtgccattatggctctgatctctgagtccatgta 1792
>gb|AY062744.1| Arabidopsis thaliana putative vacuolar sorting receptor (At2g14720; F26C24.14) mRNA, complete cds Length = 2281 Score = 50.1 bits (25), Expect = 0.006 Identities = 49/57 (85%) Strand = Plus / Minus Query: 275 ttggctgtccaaaggcatgtactgagccatgatggcgcggatctccgaatccatgta 331 ||||||||||| ||||||||||| ||||| ||||| | |||||| || |||||||| Sbjct: 2015 ttggctgtccagtggcatgtactgtgccattatggctctgatctctgagtccatgta 1959
>dbj|AK220910.1| Arabidopsis thaliana mRNA for putative vacuolar sorting receptor, complete cds, clone: RAFL22-47-H22 Length = 505 Score = 50.1 bits (25), Expect = 0.006 Identities = 49/57 (85%) Strand = Plus / Minus Query: 275 ttggctgtccaaaggcatgtactgagccatgatggcgcggatctccgaatccatgta 331 ||||||||||| ||||||||||| ||||| ||||| | |||||| || |||||||| Sbjct: 206 ttggctgtccagtggcatgtactgtgccattatggctctgatctctgagtccatgta 150
>gb|U79960.1|ATU79960 Arabidopsis thaliana vacuolar sorting receptor homolog mRNA, complete cds Length = 2290 Score = 50.1 bits (25), Expect = 0.006 Identities = 49/57 (85%) Strand = Plus / Minus Query: 275 ttggctgtccaaaggcatgtactgagccatgatggcgcggatctccgaatccatgta 331 ||||||||||| ||||||||||| ||||| ||||| | |||||| || |||||||| Sbjct: 1986 ttggctgtccagtggcatgtactgtgccattatggctctgatctctgagtccatgta 1930
>gb|U79958.1|PSU79958 Pisum sativum BP-80 vacuolar sorting receptor mRNA, complete cds Length = 1931 Score = 50.1 bits (25), Expect = 0.006 Identities = 52/61 (85%) Strand = Plus / Minus Query: 271 cttcttggctgtccaaaggcatgtactgagccatgatggcgcggatctccgaatccatgt 330 |||||||||||||||| ||||| || || |||||||| || | ||| || |||||||||| Sbjct: 1843 cttcttggctgtccaagggcatatattgtgccatgattgctctgatttcagaatccatgt 1784 Query: 331 a 331 | Sbjct: 1783 a 1783
>gb|DQ294283.1| Solanum tuberosum clone 131D12 vacuolar sorting receptor protein PV72-like protein mRNA, complete cds Length = 2269 Score = 48.1 bits (24), Expect = 0.025 Identities = 48/56 (85%) Strand = Plus / Minus Query: 282 tccaaaggcatgtactgagccatgatggcgcggatctccgaatccatgtagctccg 337 ||||||||||| || || ||||||||||| || ||||| || |||||||| ||||| Sbjct: 1956 tccaaaggcatatattgtgccatgatggcacgaatctctgagtccatgtatctccg 1901
>ref|NM_195907.1| Oryza sativa (japonica cultivar-group) putative vacuolar sorting receptor protein (OSJNBb0078C13.14), mRNA Length = 1932 Score = 46.1 bits (23), Expect = 0.098 Identities = 65/79 (82%) Strand = Plus / Minus Query: 274 cttggctgtccaaaggcatgtactgagccatgatggcgcggatctccgaatccatgtagc 333 |||| ||||||| ||||||||||| |||||||| || | |||||| || |||||||| Sbjct: 1891 cttgactgtccagtggcatgtactgtgccatgattgctctgatctcagagtccatgtatg 1832 Query: 334 tccgtagcctgtatttgta 352 || ||| ||||||||||| Sbjct: 1831 accttagtctgtatttgta 1813
>gb|AC123814.3| Mus musculus BAC clone RP24-235M22 from 10, complete sequence Length = 159486 Score = 44.1 bits (22), Expect = 0.39 Identities = 24/25 (96%) Strand = Plus / Minus Query: 374 ggcaaatacaagtccaaanaaaata 398 |||||||||||||||||| |||||| Sbjct: 75098 ggcaaatacaagtccaaataaaata 75074
>gb|AC091666.4| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBb0078C13, complete sequence Length = 140553 Score = 44.1 bits (22), Expect = 0.39 Identities = 49/58 (84%) Strand = Plus / Minus Query: 274 cttggctgtccaaaggcatgtactgagccatgatggcgcggatctccgaatccatgta 331 |||| ||||||| ||||||||||| |||||||| || | |||||| || |||||||| Sbjct: 137625 cttgactgtccagtggcatgtactgtgccatgattgctctgatctcagagtccatgta 137568
>emb|CR931730.1| Medicago truncatula chromosome 5 clone mth2-17o15, COMPLETE SEQUENCE Length = 89342 Score = 44.1 bits (22), Expect = 0.39 Identities = 49/58 (84%) Strand = Plus / Plus Query: 274 cttggctgtccaaaggcatgtactgagccatgatggcgcggatctccgaatccatgta 331 ||||||||||||| ||||| || || |||||||| || | ||| || ||||||||||| Sbjct: 13723 cttggctgtccaagggcatatattgtgccatgattgctctgatttcagaatccatgta 13780
>gb|AC079634.3|AC079634 Genomic Sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0045C13, from Chromosome 10, complete sequence Length = 161250 Score = 44.1 bits (22), Expect = 0.39 Identities = 49/58 (84%) Strand = Plus / Plus Query: 274 cttggctgtccaaaggcatgtactgagccatgatggcgcggatctccgaatccatgta 331 |||| ||||||| ||||||||||| |||||||| || | |||||| || |||||||| Sbjct: 128809 cttgactgtccagtggcatgtactgtgccatgattgctctgatctcagagtccatgta 128866
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 44.1 bits (22), Expect = 0.39 Identities = 49/58 (84%) Strand = Plus / Plus Query: 274 cttggctgtccaaaggcatgtactgagccatgatggcgcggatctccgaatccatgta 331 |||| ||||||| ||||||||||| |||||||| || | |||||| || |||||||| Sbjct: 9896330 cttgactgtccagtggcatgtactgtgccatgattgctctgatctcagagtccatgta 9896387
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 44.1 bits (22), Expect = 0.39 Identities = 49/58 (84%) Strand = Plus / Plus Query: 274 cttggctgtccaaaggcatgtactgagccatgatggcgcggatctccgaatccatgta 331 |||| ||||||| ||||||||||| |||||||| || | |||||| || |||||||| Sbjct: 9902369 cttgactgtccagtggcatgtactgtgccatgattgctctgatctcagagtccatgta 9902426
>ref|NM_115145.1| Arabidopsis thaliana ATELP1 AT3G52850 (ATELP1) mRNA, complete cds Length = 2307 Score = 42.1 bits (21), Expect = 1.5 Identities = 66/81 (81%) Strand = Plus / Minus Query: 282 tccaaaggcatgtactgagccatgatggcgcggatctccgaatccatgtagctccgtagc 341 ||||| ||||||||||| |||||||| | | || |||| ||||||||| |||| | Sbjct: 2007 tccaatggcatgtactgtgccatgatccctctaatttccgcatccatgtaactcctgatt 1948 Query: 342 ctgtatttgtatactgcatat 362 ||||||||||| ||||||||| Sbjct: 1947 ctgtatttgtagactgcatat 1927
>ref|XM_359965.1| Magnaporthe grisea 70-15 hypothetical protein (MG05340.4) partial mRNA Length = 2253 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 300 gccatgatggcgcggatctccgaat 324 |||||| |||||||||||||||||| Sbjct: 588 gccatgctggcgcggatctccgaat 564
>emb|Y07917.1|ATSPOT3PR A.thaliana mRNA for Spot 3 protein Length = 2305 Score = 42.1 bits (21), Expect = 1.5 Identities = 66/81 (81%) Strand = Plus / Minus Query: 282 tccaaaggcatgtactgagccatgatggcgcggatctccgaatccatgtagctccgtagc 341 ||||| ||||||||||| |||||||| | | || |||| ||||||||| |||| | Sbjct: 2001 tccaatggcatgtactgtgccatgatccctctaatttccgcatccatgtaactcctgatt 1942 Query: 342 ctgtatttgtatactgcatat 362 ||||||||||| ||||||||| Sbjct: 1941 ctgtatttgtagactgcatat 1921
>gb|AE003849.1| Xylella fastidiosa 9a5c, complete genome Length = 2679306 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 47 ccgacaaagggggacaatatc 67 ||||||||||||||||||||| Sbjct: 1392621 ccgacaaagggggacaatatc 1392601
>gb|AY048289.1| Arabidopsis thaliana AT3g52850/F8J2_20 mRNA, complete cds Length = 2308 Score = 42.1 bits (21), Expect = 1.5 Identities = 66/81 (81%) Strand = Plus / Minus Query: 282 tccaaaggcatgtactgagccatgatggcgcggatctccgaatccatgtagctccgtagc 341 ||||| ||||||||||| |||||||| | | || |||| ||||||||| |||| | Sbjct: 2007 tccaatggcatgtactgtgccatgatccctctaatttccgcatccatgtaactcctgatt 1948 Query: 342 ctgtatttgtatactgcatat 362 ||||||||||| ||||||||| Sbjct: 1947 ctgtatttgtagactgcatat 1927
>gb|U79959.1|ATU79959 Arabidopsis thaliana vacuolar sorting receptor homolog mRNA, complete cds Length = 2286 Score = 42.1 bits (21), Expect = 1.5 Identities = 66/81 (81%) Strand = Plus / Minus Query: 282 tccaaaggcatgtactgagccatgatggcgcggatctccgaatccatgtagctccgtagc 341 ||||| ||||||||||| |||||||| | | || |||| ||||||||| |||| | Sbjct: 2001 tccaatggcatgtactgtgccatgatccctctaatttccgcatccatgtaactcctgatt 1942 Query: 342 ctgtatttgtatactgcatat 362 ||||||||||| ||||||||| Sbjct: 1941 ctgtatttgtagactgcatat 1921
>gb|U86700.1|ATU86700 Arabidopsis thaliana EGF receptor like protein mRNA, complete cds Length = 2313 Score = 42.1 bits (21), Expect = 1.5 Identities = 66/81 (81%) Strand = Plus / Minus Query: 282 tccaaaggcatgtactgagccatgatggcgcggatctccgaatccatgtagctccgtagc 341 ||||| ||||||||||| |||||||| | | || |||| ||||||||| |||| | Sbjct: 1991 tccaatggcatgtactgtgccatgatccctctaatttccgcatccatgtaactcctgatt 1932 Query: 342 ctgtatttgtatactgcatat 362 ||||||||||| ||||||||| Sbjct: 1931 ctgtatttgtagactgcatat 1911
>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome Length = 6438405 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 245 cgccacatgctgttgctggt 264 |||||||||||||||||||| Sbjct: 6278710 cgccacatgctgttgctggt 6278729
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 6.1 Identities = 38/44 (86%) Strand = Plus / Minus Query: 288 ggcatgtactgagccatgatggcgcggatctccgaatccatgta 331 ||||||||||| | ||||||||| ||||||||| |||||||| Sbjct: 27056770 ggcatgtactgggacatgatggccatgatctccgagtccatgta 27056727
>dbj|AP003628.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0473H04 Length = 155204 Score = 40.1 bits (20), Expect = 6.1 Identities = 38/44 (86%) Strand = Plus / Minus Query: 288 ggcatgtactgagccatgatggcgcggatctccgaatccatgta 331 ||||||||||| | ||||||||| ||||||||| |||||||| Sbjct: 25580 ggcatgtactgggacatgatggccatgatctccgagtccatgta 25537
>dbj|AK100655.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023111G13, full insert sequence Length = 2663 Score = 40.1 bits (20), Expect = 6.1 Identities = 38/44 (86%) Strand = Plus / Minus Query: 288 ggcatgtactgagccatgatggcgcggatctccgaatccatgta 331 ||||||||||| | ||||||||| ||||||||| |||||||| Sbjct: 2194 ggcatgtactgggacatgatggccatgatctccgagtccatgta 2151
>emb|AL928866.7| Zebrafish DNA sequence from clone DKEY-11E23 in linkage group 20, complete sequence Length = 249759 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 90 cacaaaatgaaggtgcacaa 109 |||||||||||||||||||| Sbjct: 96215 cacaaaatgaaggtgcacaa 96234
>dbj|AB081457.1| Urechis unicinctus gene for Uru-TK receptor, complete cds Length = 5099 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 145 cgcgtacaaattgtatcttt 164 |||||||||||||||||||| Sbjct: 597 cgcgtacaaattgtatcttt 616
>gb|AC141560.4| Mus musculus BAC clone RP23-425A5 from 12, complete sequence Length = 196665 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 342 ctgtatttgtatactgcata 361 |||||||||||||||||||| Sbjct: 87009 ctgtatttgtatactgcata 87028 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,948,292 Number of Sequences: 3902068 Number of extensions: 2948292 Number of successful extensions: 46146 Number of sequences better than 10.0: 63 Number of HSP's better than 10.0 without gapping: 58 Number of HSP's successfully gapped in prelim test: 5 Number of HSP's that attempted gapping in prelim test: 45826 Number of HSP's gapped (non-prelim): 312 length of query: 451 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 429 effective length of database: 17,147,199,772 effective search space: 7356148702188 effective search space used: 7356148702188 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)