ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal16f17
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK105057.1| Oryza sativa (japonica cultivar-group) cDNA clon... 180 4e-42
2dbj|AK100539.1| Oryza sativa (japonica cultivar-group) cDNA clon... 180 4e-42
3dbj|AK099666.1| Oryza sativa (japonica cultivar-group) cDNA clon... 180 4e-42
4dbj|AK063085.1| Oryza sativa (japonica cultivar-group) cDNA clon... 121 3e-24
5gb|BT018833.1| Zea mays clone EL01N0552B08.d mRNA sequence 96 2e-16
6gb|AC103551.7| Oryza sativa chromosome 3 BAC OSJNBb0058G04 genom... 90 1e-14
7gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 90 1e-14
8dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 90 1e-14
9gb|AY105023.1| Zea mays PCO115768 mRNA sequence 54 6e-04
10dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.14
11dbj|AP005110.2| Oryza sativa (japonica cultivar-group) genomic D... 46 0.14
12gb|AC134910.5| Mus musculus BAC clone RP23-405O11 from chromosom... 42 2.3
13gb|AC116469.13| Mus musculus chromosome 5, clone RP23-171F16, co... 42 2.3
14gb|AE017341.1| Cryptococcus neoformans var. neoformans JEC21 chr... 40 8.9
15gb|AC105898.2| Drosophila melanogaster clone BACR25P15, complete... 40 8.9
16gb|AC105330.8| Mus musculus chromosome 15, clone RP23-281C10, co... 40 8.9
17ref|XM_706750.1| Candida albicans SC5314 putative SRPK1-like pro... 40 8.9
18ref|XM_706730.1| Candida albicans SC5314 putative SRPK1-like pro... 40 8.9
19ref|XM_535987.2| PREDICTED: Canis familiaris similar to tubulin,... 40 8.9
20ref|XM_567172.1| Cryptococcus neoformans var. neoformans JEC21 h... 40 8.9
21gb|AC125174.3| Mus musculus BAC clone RP24-544G11 from chromosom... 40 8.9
22gb|AC127281.3| Mus musculus BAC clone RP24-273C15 from chromosom... 40 8.9
23gb|AC123854.3| Mus musculus BAC clone RP23-328J8 from chromosome... 40 8.9
24gb|AC122872.3| Mus musculus BAC clone RP23-110E8 from 1, complet... 40 8.9
25gb|AC122817.3| Mus musculus BAC clone RP23-241M6 from 16, comple... 40 8.9
26gb|AC121118.6| Mus musculus, clone RP23-385E21, complete sequence 40 8.9
27gb|AC113395.2| Homo sapiens chromosome 5 clone RP11-418P19, comp... 40 8.9
28dbj|AK049289.1| Mus musculus ES cells cDNA, RIKEN full-length en... 40 8.9
29gb|AC113377.2| Homo sapiens chromosome 5 clone RP11-26N10, compl... 40 8.9
30emb|CT573073.1| Kuenenia stuttgartiensis genome fragment KUST_C ... 40 8.9
31gb|AE003585.5| Drosophila melanogaster chromosome 2L, section 6 ... 40 8.9
32emb|Z22948.1|HSP65A Homo sapiens p65 gene for p65 subunit of tra... 40 8.9
33gb|AC110174.10| Mus musculus chromosome 3, clone RP23-293K21, co... 40 8.9
34gb|AC175031.2| Mus musculus BAC clone RP24-381O1 from chromosome... 40 8.9
35gb|AC146978.7| Mus musculus chromosome 7, clone RP24-217F6, comp... 40 8.9 
>dbj|AK105057.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-043-C07, full
            insert sequence
          Length = 2283

 Score =  180 bits (91), Expect = 4e-42
 Identities = 251/303 (82%), Gaps = 1/303 (0%)
 Strand = Plus / Minus

                                                                        
Query: 348  tcaacagctccagacacttggtctgatggctgatgaaaaagtaggagtgctatggatcga 407
            |||||||||||||  || || |||||||||||||| ||||| |  || |||||||| |||
Sbjct: 1861 tcaacagctccagtgacatgctctgatggctgatggaaaagcaacagagctatggaccga 1802

                                                                        
Query: 408  tcgattggatttgtctgcgtctcaatgctcctatgatcaacaaacttgcccgaagtttcc 467
            || |||||||||||||| ||||| ||||||| | ||||||||||||| ||||||||||| 
Sbjct: 1801 tcaattggatttgtctgtgtctcgatgctcccaggatcaacaaactttcccgaagtttct 1742

                                                                        
Query: 468  atattttgtgtatcctttacatcccagctttcttcatgtctattcatcacatttgggaaa 527
              ||||||  | ||||||||||    ||| ||| |||   | |||||   ||||||||| 
Sbjct: 1741 gcattttgcatgtcctttacattgtggctatctccattgttgttcattgtatttgggaag 1682

                                                                        
Query: 528  actggtctattttgaacacttcttgccaggcggtacaaaccatctctaatgcacagtttg 587
            ||| | ||||| ||  ||||||||||||||||||| || ||||||| |||||||| ||| 
Sbjct: 1681 acttgcctattctgcgcacttcttgccaggcggtataacccatctcgaatgcacattttt 1622

                                                                        
Query: 588  gttttcacgtccaactgactaactgcatcctgaagttgtcggaagctgcttttcttcaac 647
            |||||||| |||||||||||||||||||||||||| || || |||||| || ||||||||
Sbjct: 1621 gttttcacatccaactgactaactgcatcctgaagctgccgaaagctg-ttctcttcaac 1563

               
Query: 648  tga 650
            |||
Sbjct: 1562 tga 1560
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>dbj|AK100539.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023102F06, full
            insert sequence
          Length = 2472

 Score =  180 bits (91), Expect = 4e-42
 Identities = 251/303 (82%), Gaps = 1/303 (0%)
 Strand = Plus / Minus

                                                                        
Query: 348  tcaacagctccagacacttggtctgatggctgatgaaaaagtaggagtgctatggatcga 407
            |||||||||||||  || || |||||||||||||| ||||| |  || |||||||| |||
Sbjct: 1937 tcaacagctccagtgacatgctctgatggctgatggaaaagcaacagagctatggaccga 1878

                                                                        
Query: 408  tcgattggatttgtctgcgtctcaatgctcctatgatcaacaaacttgcccgaagtttcc 467
            || |||||||||||||| ||||| ||||||| | ||||||||||||| ||||||||||| 
Sbjct: 1877 tcaattggatttgtctgtgtctcgatgctcccaggatcaacaaactttcccgaagtttct 1818

                                                                        
Query: 468  atattttgtgtatcctttacatcccagctttcttcatgtctattcatcacatttgggaaa 527
              ||||||  | ||||||||||    ||| ||| |||   | |||||   ||||||||| 
Sbjct: 1817 gcattttgcatgtcctttacattgtggctatctccattgttgttcattgtatttgggaag 1758

                                                                        
Query: 528  actggtctattttgaacacttcttgccaggcggtacaaaccatctctaatgcacagtttg 587
            ||| | ||||| ||  ||||||||||||||||||| || ||||||| |||||||| ||| 
Sbjct: 1757 acttgcctattctgcgcacttcttgccaggcggtataacccatctcgaatgcacattttt 1698

                                                                        
Query: 588  gttttcacgtccaactgactaactgcatcctgaagttgtcggaagctgcttttcttcaac 647
            |||||||| |||||||||||||||||||||||||| || || |||||| || ||||||||
Sbjct: 1697 gttttcacatccaactgactaactgcatcctgaagctgccgaaagctg-ttctcttcaac 1639

               
Query: 648  tga 650
            |||
Sbjct: 1638 tga 1636
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>dbj|AK099666.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013067D14, full
            insert sequence
          Length = 2166

 Score =  180 bits (91), Expect = 4e-42
 Identities = 251/303 (82%), Gaps = 1/303 (0%)
 Strand = Plus / Minus

                                                                        
Query: 348  tcaacagctccagacacttggtctgatggctgatgaaaaagtaggagtgctatggatcga 407
            |||||||||||||  || || |||||||||||||| ||||| |  || |||||||| |||
Sbjct: 1781 tcaacagctccagtgacatgctctgatggctgatggaaaagcaacagagctatggaccga 1722

                                                                        
Query: 408  tcgattggatttgtctgcgtctcaatgctcctatgatcaacaaacttgcccgaagtttcc 467
            || |||||||||||||| ||||| ||||||| | ||||||||||||| ||||||||||| 
Sbjct: 1721 tcaattggatttgtctgtgtctcgatgctcccaggatcaacaaactttcccgaagtttct 1662

                                                                        
Query: 468  atattttgtgtatcctttacatcccagctttcttcatgtctattcatcacatttgggaaa 527
              ||||||  | ||||||||||    ||| ||| |||   | |||||   ||||||||| 
Sbjct: 1661 gcattttgcatgtcctttacattgtggctatctccattgttgttcattgtatttgggaag 1602

                                                                        
Query: 528  actggtctattttgaacacttcttgccaggcggtacaaaccatctctaatgcacagtttg 587
            ||| | ||||| ||  ||||||||||||||||||| || ||||||| |||||||| ||| 
Sbjct: 1601 acttgcctattctgcgcacttcttgccaggcggtataacccatctcgaatgcacattttt 1542

                                                                        
Query: 588  gttttcacgtccaactgactaactgcatcctgaagttgtcggaagctgcttttcttcaac 647
            |||||||| |||||||||||||||||||||||||| || || |||||| || ||||||||
Sbjct: 1541 gttttcacatccaactgactaactgcatcctgaagctgccgaaagctg-ttctcttcaac 1483

               
Query: 648  tga 650
            |||
Sbjct: 1482 tga 1480
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>dbj|AK063085.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-111-A07, full
           insert sequence
          Length = 884

 Score =  121 bits (61), Expect = 3e-24
 Identities = 116/133 (87%), Gaps = 1/133 (0%)
 Strand = Plus / Minus

                                                                       
Query: 518 atttgggaaaactggtctattttgaacacttcttgccaggcggtacaaaccatctctaat 577
           ||||||||| ||| | ||||| ||  ||||||||||||||||||| || ||||||| |||
Sbjct: 703 atttgggaagacttgcctattctgcgcacttcttgccaggcggtataacccatctcgaat 644

                                                                       
Query: 578 gcacagtttggttttcacgtccaactgactaactgcatcctgaagttgtcggaagctgct 637
           ||||| ||| |||||||| |||||||||||||||||||||||||| || || |||||| |
Sbjct: 643 gcacatttttgttttcacatccaactgactaactgcatcctgaagctgccgaaagctg-t 585

                        
Query: 638 tttcttcaactga 650
           | |||||||||||
Sbjct: 584 tctcttcaactga 572
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>gb|BT018833.1| Zea mays clone EL01N0552B08.d mRNA sequence
          Length = 2357

 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 84/96 (87%)
 Strand = Plus / Minus

                                                                        
Query: 544  cacttcttgccaggcggtacaaaccatctctaatgcacagtttggttttcacgtccaact 603
            |||||| |||||  ||||| ||||||||||||||||||| |||||||| ||| |||| ||
Sbjct: 1629 cacttcgtgccaatcggtataaaccatctctaatgcacaatttggtttgcacatccagct 1570

                                                
Query: 604  gactaactgcatcctgaagttgtcggaagctgcttt 639
            ||||||| |||| ||| |||||||| ||||||||||
Sbjct: 1569 gactaacagcattctgcagttgtcgaaagctgcttt 1534
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>gb|AC103551.7| Oryza sativa chromosome 3 BAC OSJNBb0058G04 genomic sequence, complete
             sequence
          Length = 137709

 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 90/105 (85%)
 Strand = Plus / Plus

                                                                         
Query: 348   tcaacagctccagacacttggtctgatggctgatgaaaaagtaggagtgctatggatcga 407
             |||||||||||||  || || |||||||||||||| ||||| |  || |||||||| |||
Sbjct: 25960 tcaacagctccagtgacatgctctgatggctgatggaaaagcaacagagctatggaccga 26019

                                                          
Query: 408   tcgattggatttgtctgcgtctcaatgctcctatgatcaacaaac 452
             || |||||||||||||| ||||| ||||||| | |||||||||||
Sbjct: 26020 tcaattggatttgtctgtgtctcgatgctcccaggatcaacaaac 26064



 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 76/88 (86%)
 Strand = Plus / Plus

                                                                         
Query: 518   atttgggaaaactggtctattttgaacacttcttgccaggcggtacaaaccatctctaat 577
             ||||||||| ||| | ||||| ||  ||||||||||||||||||| || ||||||| |||
Sbjct: 26602 atttgggaagacttgcctattctgcgcacttcttgccaggcggtataacccatctcgaat 26661

                                         
Query: 578   gcacagtttggttttcacgtccaactga 605
             ||||| ||| |||||||| |||||||||
Sbjct: 26662 gcacatttttgttttcacatccaactga 26689



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 44/49 (89%), Gaps = 1/49 (2%)
 Strand = Plus / Plus

                                                              
Query: 602   ctgactaactgcatcctgaagttgtcggaagctgcttttcttcaactga 650
             ||||||||||||||||||||| || || |||||| || |||||||||||
Sbjct: 26992 ctgactaactgcatcctgaagctgccgaaagctg-ttctcttcaactga 27039
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 90/105 (85%)
 Strand = Plus / Minus

                                                                            
Query: 348      tcaacagctccagacacttggtctgatggctgatgaaaaagtaggagtgctatggatcga 407
                |||||||||||||  || || |||||||||||||| ||||| |  || |||||||| |||
Sbjct: 15311388 tcaacagctccagtgacatgctctgatggctgatggaaaagcaacagagctatggaccga 15311329

                                                             
Query: 408      tcgattggatttgtctgcgtctcaatgctcctatgatcaacaaac 452
                || |||||||||||||| ||||| ||||||| | |||||||||||
Sbjct: 15311328 tcaattggatttgtctgtgtctcgatgctcccaggatcaacaaac 15311284



 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 76/88 (86%)
 Strand = Plus / Minus

                                                                            
Query: 518      atttgggaaaactggtctattttgaacacttcttgccaggcggtacaaaccatctctaat 577
                ||||||||| ||| | ||||| ||  ||||||||||||||||||| || ||||||| |||
Sbjct: 15310746 atttgggaagacttgcctattctgcgcacttcttgccaggcggtataacccatctcgaat 15310687

                                            
Query: 578      gcacagtttggttttcacgtccaactga 605
                ||||| ||| |||||||| |||||||||
Sbjct: 15310686 gcacatttttgttttcacatccaactga 15310659



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 44/49 (89%), Gaps = 1/49 (2%)
 Strand = Plus / Minus

                                                                 
Query: 602      ctgactaactgcatcctgaagttgtcggaagctgcttttcttcaactga 650
                ||||||||||||||||||||| || || |||||| || |||||||||||
Sbjct: 15310356 ctgactaactgcatcctgaagctgccgaaagctg-ttctcttcaactga 15310309
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 90/105 (85%)
 Strand = Plus / Minus

                                                                            
Query: 348      tcaacagctccagacacttggtctgatggctgatgaaaaagtaggagtgctatggatcga 407
                |||||||||||||  || || |||||||||||||| ||||| |  || |||||||| |||
Sbjct: 15305922 tcaacagctccagtgacatgctctgatggctgatggaaaagcaacagagctatggaccga 15305863

                                                             
Query: 408      tcgattggatttgtctgcgtctcaatgctcctatgatcaacaaac 452
                || |||||||||||||| ||||| ||||||| | |||||||||||
Sbjct: 15305862 tcaattggatttgtctgtgtctcgatgctcccaggatcaacaaac 15305818



 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 76/88 (86%)
 Strand = Plus / Minus

                                                                            
Query: 518      atttgggaaaactggtctattttgaacacttcttgccaggcggtacaaaccatctctaat 577
                ||||||||| ||| | ||||| ||  ||||||||||||||||||| || ||||||| |||
Sbjct: 15305280 atttgggaagacttgcctattctgcgcacttcttgccaggcggtataacccatctcgaat 15305221

                                            
Query: 578      gcacagtttggttttcacgtccaactga 605
                ||||| ||| |||||||| |||||||||
Sbjct: 15305220 gcacatttttgttttcacatccaactga 15305193



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 44/49 (89%), Gaps = 1/49 (2%)
 Strand = Plus / Minus

                                                                 
Query: 602      ctgactaactgcatcctgaagttgtcggaagctgcttttcttcaactga 650
                ||||||||||||||||||||| || || |||||| || |||||||||||
Sbjct: 15304890 ctgactaactgcatcctgaagctgccgaaagctg-ttctcttcaactga 15304843
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>gb|AY105023.1| Zea mays PCO115768 mRNA sequence
          Length = 668

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 48/55 (87%)
 Strand = Plus / Minus

                                                                  
Query: 384 aaaagtaggagtgctatggatcgatcgattggatttgtctgcgtctcaatgctcc 438
           |||||||| || ||||| || |||||||| || |||||||||||||| |||||||
Sbjct: 347 aaaagtagcagagctatagaccgatcgatcgggtttgtctgcgtctcgatgctcc 293
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                           
Query: 383      aaaaagtaggagtgctatggatcgatc 409
                ||||||||||||| |||||||||||||
Sbjct: 19614359 aaaaagtaggagtactatggatcgatc 19614333
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>dbj|AP005110.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0605D08
          Length = 144340

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                        
Query: 383   aaaaagtaggagtgctatggatcgatc 409
             ||||||||||||| |||||||||||||
Sbjct: 80645 aaaaagtaggagtactatggatcgatc 80619
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>gb|AC134910.5| Mus musculus BAC clone RP23-405O11 from chromosome 5, complete sequence
          Length = 200538

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 1      tatctgcctttgtcttgagat 21
              |||||||||||||||||||||
Sbjct: 166247 tatctgcctttgtcttgagat 166267
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>gb|AC116469.13| Mus musculus chromosome 5, clone RP23-171F16, complete sequence
          Length = 207364

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 1      tatctgcctttgtcttgagat 21
              |||||||||||||||||||||
Sbjct: 198903 tatctgcctttgtcttgagat 198883
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>gb|AE017341.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 1, complete
               sequence
          Length = 2300533

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 480     tcctttacatcccagctttc 499
               ||||||||||||||||||||
Sbjct: 1319493 tcctttacatcccagctttc 1319474
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>gb|AC105898.2| Drosophila melanogaster clone BACR25P15, complete sequence
          Length = 169913

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 198   agatgattacaatatatcaa 217
             ||||||||||||||||||||
Sbjct: 66111 agatgattacaatatatcaa 66130
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>gb|AC105330.8| Mus musculus chromosome 15, clone RP23-281C10, complete sequence
          Length = 206675

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 22    tacacaaaatgttagccagaacaa 45
             |||||||||||||||| |||||||
Sbjct: 23023 tacacaaaatgttagctagaacaa 23046
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>ref|XM_706750.1| Candida albicans SC5314 putative SRPK1-like protein kinase
           (CaO19.35), mRNA
          Length = 3045

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 41  aacaacaaagtcaaccttca 60
           ||||||||||||||||||||
Sbjct: 347 aacaacaaagtcaaccttca 366
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>ref|XM_706730.1| Candida albicans SC5314 putative SRPK1-like protein kinase
           (CaO19.7708), mRNA
          Length = 3063

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 41  aacaacaaagtcaaccttca 60
           ||||||||||||||||||||
Sbjct: 356 aacaacaaagtcaaccttca 375
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>ref|XM_535987.2| PREDICTED: Canis familiaris similar to tubulin, beta, 2
           (LOC478825), mRNA
          Length = 974

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 464 ttccatattttgtgtatcct 483
           ||||||||||||||||||||
Sbjct: 80  ttccatattttgtgtatcct 61
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>ref|XM_567172.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein
           (CNA04990) partial mRNA
          Length = 1295

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 480 tcctttacatcccagctttc 499
           ||||||||||||||||||||
Sbjct: 478 tcctttacatcccagctttc 497
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>gb|AC125174.3| Mus musculus BAC clone RP24-544G11 from chromosome 16, complete sequence
          Length = 196646

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 3      tctgcctttgtcttgagatt 22
              ||||||||||||||||||||
Sbjct: 172044 tctgcctttgtcttgagatt 172063
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>gb|AC127281.3| Mus musculus BAC clone RP24-273C15 from chromosome 13, complete sequence
          Length = 154576

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 466    ccatattttgtgtatccttt 485
              ||||||||||||||||||||
Sbjct: 104107 ccatattttgtgtatccttt 104126
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>gb|AC123854.3| Mus musculus BAC clone RP23-328J8 from chromosome 1, complete sequence
          Length = 187979

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 53    aaccttcatgaatgaattcacagt 76
             ||||||||||||| ||||||||||
Sbjct: 48800 aaccttcatgaattaattcacagt 48823
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>gb|AC122872.3| Mus musculus BAC clone RP23-110E8 from 1, complete sequence
          Length = 190644

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 53     aaccttcatgaatgaattcacagt 76
              ||||||||||||| ||||||||||
Sbjct: 129209 aaccttcatgaattaattcacagt 129232
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>gb|AC122817.3| Mus musculus BAC clone RP23-241M6 from 16, complete sequence
          Length = 185702

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 3      tctgcctttgtcttgagatt 22
              ||||||||||||||||||||
Sbjct: 178819 tctgcctttgtcttgagatt 178800
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>gb|AC121118.6| Mus musculus, clone RP23-385E21, complete sequence
          Length = 202500

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 263    ctccaataattttcacaaca 282
              ||||||||||||||||||||
Sbjct: 181559 ctccaataattttcacaaca 181540
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>gb|AC113395.2| Homo sapiens chromosome 5 clone RP11-418P19, complete sequence
          Length = 195369

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 463    tttccatattttgtgtatcc 482
              ||||||||||||||||||||
Sbjct: 155145 tttccatattttgtgtatcc 155164
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>dbj|AK049289.1| Mus musculus ES cells cDNA, RIKEN full-length enriched library,
            clone:C330019L16 product:hypothetical protein, full
            insert sequence
          Length = 4079

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 483  tttacatcccagctttcttc 502
            ||||||||||||||||||||
Sbjct: 1284 tttacatcccagctttcttc 1303
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>gb|AC113377.2| Homo sapiens chromosome 5 clone RP11-26N10, complete sequence
          Length = 134277

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 463   tttccatattttgtgtatcc 482
             ||||||||||||||||||||
Sbjct: 36936 tttccatattttgtgtatcc 36955
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>emb|CT573073.1| Kuenenia stuttgartiensis genome fragment KUST_C (3 of 5)
          Length = 893329

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 377    ctgatgaaaaagtaggagtg 396
              ||||||||||||||||||||
Sbjct: 256937 ctgatgaaaaagtaggagtg 256956
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>gb|AE003585.5| Drosophila melanogaster chromosome 2L, section 6 of 83 of the complete
              sequence
          Length = 343161

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 198    agatgattacaatatatcaa 217
              ||||||||||||||||||||
Sbjct: 249194 agatgattacaatatatcaa 249213
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>emb|Z22948.1|HSP65A Homo sapiens p65 gene for p65 subunit of transcription factor
           NF-kappaB (exons 1-3 and joined CDS)
          Length = 764

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 4   ctgcctttgtcttgagatta 23
           ||||||||||||||||||||
Sbjct: 666 ctgcctttgtcttgagatta 685
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>gb|AC110174.10| Mus musculus chromosome 3, clone RP23-293K21, complete sequence
          Length = 253469

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 263    ctccaataattttcacaaca 282
              ||||||||||||||||||||
Sbjct: 170327 ctccaataattttcacaaca 170346
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>gb|AC175031.2| Mus musculus BAC clone RP24-381O1 from chromosome 13, complete sequence
          Length = 98527

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 466   ccatattttgtgtatccttt 485
             ||||||||||||||||||||
Sbjct: 17729 ccatattttgtgtatccttt 17748
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>gb|AC146978.7| Mus musculus chromosome 7, clone RP24-217F6, complete sequence
          Length = 152682

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 483   tttacatcccagctttcttc 502
             ||||||||||||||||||||
Sbjct: 25216 tttacatcccagctttcttc 25197


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,503,309
Number of Sequences: 3902068
Number of extensions: 6503309
Number of successful extensions: 122335
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 122128
Number of HSP's gapped (non-prelim): 207
length of query: 654
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 631
effective length of database: 17,143,297,704
effective search space: 10817420851224
effective search space used: 10817420851224
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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