| Clone Name | rbaal16f08 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BT016442.1| Zea mays clone Contig275 mRNA sequence Length = 1443 Score = 254 bits (128), Expect = 2e-64 Identities = 159/168 (94%), Gaps = 1/168 (0%) Strand = Plus / Minus Query: 343 accaggggaggatcttccagcgctggttgtcgccctcgcaccacttccagagcacgacct 402 |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 1067 accaagggaggatcttccagcgctggttgtcgccctcgcaccacttccagagcacgatct 1008 Query: 403 cggtgccgtcgtggacgccgccgtgggccttgtcgccgtggaaggcgtcgaagttgaggt 462 |||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1007 cggtaccgtcatggacgccgccgtgggccttgtcgccgtggaaggcgtcgaagttgaggt 948 Query: 463 agatgttgttcaccatgcgcacgcagcnggaagcccttgcccacgtcg 510 |||||||||| |||||||| ||||||| ||||||| ||||| |||||| Sbjct: 947 agatgttgttgaccatgcggacgcagc-ggaagccgttgccgacgtcg 901 Score = 196 bits (99), Expect = 5e-47 Identities = 145/159 (91%), Gaps = 1/159 (0%) Strand = Plus / Minus Query: 351 aggatcttccagcgctggttgtcgccctcgcaccacttccagagcacgacctcggtgccg 410 ||||||||||||| |||||||||||||| |||||||| |||||||||||| |||||||| Sbjct: 561 aggatcttccagctctggttgtcgcccttgcaccactcccagagcacgacggcggtgccg 502 Query: 411 tcgtggacgccgccgtgggccttgtcgccgtggaaggcgtcgaagttgaggtagatgttg 470 ||||| |||||||||||| |||||||||||||||||||||||||||||||| | ||||| Sbjct: 501 tcgtgcacgccgccgtggtccttgtcgccgtggaaggcgtcgaagttgaggcgggtgttg 442 Query: 471 ttcaccatgcgcacgcagcnggaagcccttgcccacgtc 509 || |||||||| | ||||| ||||||||||||||||||| Sbjct: 441 ttgaccatgcggatgcagc-ggaagcccttgcccacgtc 404
>gb|BT018000.1| Zea mays clone EL01N0526G03.c mRNA sequence Length = 842 Score = 254 bits (128), Expect = 2e-64 Identities = 159/168 (94%), Gaps = 1/168 (0%) Strand = Plus / Minus Query: 343 accaggggaggatcttccagcgctggttgtcgccctcgcaccacttccagagcacgacct 402 |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 501 accaagggaggatcttccagcgctggttgtcgccctcgcaccacttccagagcacgatct 442 Query: 403 cggtgccgtcgtggacgccgccgtgggccttgtcgccgtggaaggcgtcgaagttgaggt 462 |||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 441 cggtaccgtcatggacgccgccgtgggccttgtcgccgtggaaggcgtcgaagttgaggt 382 Query: 463 agatgttgttcaccatgcgcacgcagcnggaagcccttgcccacgtcg 510 |||||||||| |||||||| ||||||| ||||||| ||||| |||||| Sbjct: 381 agatgttgttgaccatgcggacgcagc-ggaagccgttgccgacgtcg 335
>ref|XM_479572.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1239 Score = 238 bits (120), Expect = 1e-59 Identities = 157/168 (93%), Gaps = 1/168 (0%) Strand = Plus / Minus Query: 339 atctaccaggggaggatcttccagcgctggttgtcgccctcgcaccacttccagagcacg 398 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||| Sbjct: 899 atctaccaggggaggatcttccagcgctggttgtcaccctcgcaccacttccacagcacg 840 Query: 399 acctcggtgccgtcgtggacgccgccgtgggccttgtcgccgtggaaggcgtcgaagttg 458 | ||||||||| ||||||| ||||||||| |||||||||| |||||||||||||||||| Sbjct: 839 atctcggtgccatcgtggatgccgccgtgatccttgtcgccatggaaggcgtcgaagttg 780 Query: 459 aggtagatgttgttcaccatgcgcacgcagcnggaagcccttgcccac 506 ||||||||||||||||||||||| | ||||| |||||||||||||||| Sbjct: 779 aggtagatgttgttcaccatgcggatgcagc-ggaagcccttgcccac 733 Score = 186 bits (94), Expect = 5e-44 Identities = 149/166 (89%), Gaps = 1/166 (0%) Strand = Plus / Minus Query: 344 ccaggggaggatcttccagcgctggttgtcgccctcgcaccacttccagagcacgacctc 403 |||||||||||||||||||| |||||||||||||| |||||||| |||||||||||| Sbjct: 375 ccaggggaggatcttccagctctggttgtcgcccttgcaccactcccagagcacgacggt 316 Query: 404 ggtgccgtcgtggacgccgccgtgggccttgtcgccgtggaaggcgtcgaagttgaggta 463 |||||||||| |||||||||||||| |||||||||||||||||||||| ||||||||| Sbjct: 315 ggtgccgtcgcggacgccgccgtggtccttgtcgccgtggaaggcgtccaagttgaggcg 256 Query: 464 gatgttgttcaccatgcgcacgcagcnggaagcccttgcccacgtc 509 | ||||||| |||||||| | ||||| ||||||||||||| ||||| Sbjct: 255 ggtgttgttgaccatgcggatgcagc-ggaagcccttgccgacgtc 211
>ref|XM_479571.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1511 Score = 238 bits (120), Expect = 1e-59 Identities = 157/168 (93%), Gaps = 1/168 (0%) Strand = Plus / Minus Query: 339 atctaccaggggaggatcttccagcgctggttgtcgccctcgcaccacttccagagcacg 398 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||| Sbjct: 1114 atctaccaggggaggatcttccagcgctggttgtcaccctcgcaccacttccacagcacg 1055 Query: 399 acctcggtgccgtcgtggacgccgccgtgggccttgtcgccgtggaaggcgtcgaagttg 458 | ||||||||| ||||||| ||||||||| |||||||||| |||||||||||||||||| Sbjct: 1054 atctcggtgccatcgtggatgccgccgtgatccttgtcgccatggaaggcgtcgaagttg 995 Query: 459 aggtagatgttgttcaccatgcgcacgcagcnggaagcccttgcccac 506 ||||||||||||||||||||||| | ||||| |||||||||||||||| Sbjct: 994 aggtagatgttgttcaccatgcggatgcagc-ggaagcccttgcccac 948 Score = 186 bits (94), Expect = 5e-44 Identities = 149/166 (89%), Gaps = 1/166 (0%) Strand = Plus / Minus Query: 344 ccaggggaggatcttccagcgctggttgtcgccctcgcaccacttccagagcacgacctc 403 |||||||||||||||||||| |||||||||||||| |||||||| |||||||||||| Sbjct: 590 ccaggggaggatcttccagctctggttgtcgcccttgcaccactcccagagcacgacggt 531 Query: 404 ggtgccgtcgtggacgccgccgtgggccttgtcgccgtggaaggcgtcgaagttgaggta 463 |||||||||| |||||||||||||| |||||||||||||||||||||| ||||||||| Sbjct: 530 ggtgccgtcgcggacgccgccgtggtccttgtcgccgtggaaggcgtccaagttgaggcg 471 Query: 464 gatgttgttcaccatgcgcacgcagcnggaagcccttgcccacgtc 509 | ||||||| |||||||| | ||||| ||||||||||||| ||||| Sbjct: 470 ggtgttgttgaccatgcggatgcagc-ggaagcccttgccgacgtc 426
>dbj|AK103324.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033125K07, full insert sequence Length = 1512 Score = 238 bits (120), Expect = 1e-59 Identities = 157/168 (93%), Gaps = 1/168 (0%) Strand = Plus / Minus Query: 339 atctaccaggggaggatcttccagcgctggttgtcgccctcgcaccacttccagagcacg 398 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||| Sbjct: 1114 atctaccaggggaggatcttccagcgctggttgtcaccctcgcaccacttccacagcacg 1055 Query: 399 acctcggtgccgtcgtggacgccgccgtgggccttgtcgccgtggaaggcgtcgaagttg 458 | ||||||||| ||||||| ||||||||| |||||||||| |||||||||||||||||| Sbjct: 1054 atctcggtgccatcgtggatgccgccgtgatccttgtcgccatggaaggcgtcgaagttg 995 Query: 459 aggtagatgttgttcaccatgcgcacgcagcnggaagcccttgcccac 506 ||||||||||||||||||||||| | ||||| |||||||||||||||| Sbjct: 994 aggtagatgttgttcaccatgcggatgcagc-ggaagcccttgcccac 948 Score = 186 bits (94), Expect = 5e-44 Identities = 149/166 (89%), Gaps = 1/166 (0%) Strand = Plus / Minus Query: 344 ccaggggaggatcttccagcgctggttgtcgccctcgcaccacttccagagcacgacctc 403 |||||||||||||||||||| |||||||||||||| |||||||| |||||||||||| Sbjct: 590 ccaggggaggatcttccagctctggttgtcgcccttgcaccactcccagagcacgacggt 531 Query: 404 ggtgccgtcgtggacgccgccgtgggccttgtcgccgtggaaggcgtcgaagttgaggta 463 |||||||||| |||||||||||||| |||||||||||||||||||||| ||||||||| Sbjct: 530 ggtgccgtcgcggacgccgccgtggtccttgtcgccgtggaaggcgtccaagttgaggcg 471 Query: 464 gatgttgttcaccatgcgcacgcagcnggaagcccttgcccacgtc 509 | ||||||| |||||||| | ||||| ||||||||||||| ||||| Sbjct: 470 ggtgttgttgaccatgcggatgcagc-ggaagcccttgccgacgtc 426
>dbj|AK060899.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-D04, full insert sequence Length = 1239 Score = 238 bits (120), Expect = 1e-59 Identities = 157/168 (93%), Gaps = 1/168 (0%) Strand = Plus / Minus Query: 339 atctaccaggggaggatcttccagcgctggttgtcgccctcgcaccacttccagagcacg 398 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||| Sbjct: 899 atctaccaggggaggatcttccagcgctggttgtcaccctcgcaccacttccacagcacg 840 Query: 399 acctcggtgccgtcgtggacgccgccgtgggccttgtcgccgtggaaggcgtcgaagttg 458 | ||||||||| ||||||| ||||||||| |||||||||| |||||||||||||||||| Sbjct: 839 atctcggtgccatcgtggatgccgccgtgatccttgtcgccatggaaggcgtcgaagttg 780 Query: 459 aggtagatgttgttcaccatgcgcacgcagcnggaagcccttgcccac 506 ||||||||||||||||||||||| | ||||| |||||||||||||||| Sbjct: 779 aggtagatgttgttcaccatgcggatgcagc-ggaagcccttgcccac 733 Score = 186 bits (94), Expect = 5e-44 Identities = 149/166 (89%), Gaps = 1/166 (0%) Strand = Plus / Minus Query: 344 ccaggggaggatcttccagcgctggttgtcgccctcgcaccacttccagagcacgacctc 403 |||||||||||||||||||| |||||||||||||| |||||||| |||||||||||| Sbjct: 375 ccaggggaggatcttccagctctggttgtcgcccttgcaccactcccagagcacgacggt 316 Query: 404 ggtgccgtcgtggacgccgccgtgggccttgtcgccgtggaaggcgtcgaagttgaggta 463 |||||||||| |||||||||||||| |||||||||||||||||||||| ||||||||| Sbjct: 315 ggtgccgtcgcggacgccgccgtggtccttgtcgccgtggaaggcgtccaagttgaggcg 256 Query: 464 gatgttgttcaccatgcgcacgcagcnggaagcccttgcccacgtc 509 | ||||||| |||||||| | ||||| ||||||||||||| ||||| Sbjct: 255 ggtgttgttgaccatgcggatgcagc-ggaagcccttgccgacgtc 211
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 230 bits (116), Expect = 4e-57 Identities = 153/164 (93%), Gaps = 1/164 (0%) Strand = Plus / Minus Query: 343 accaggggaggatcttccagcgctggttgtcgccctcgcaccacttccagagcacgacct 402 ||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||| || Sbjct: 28952114 accaggggaggatcttccagcgctggttgtcaccctcgcaccacttccacagcacgatct 28952055 Query: 403 cggtgccgtcgtggacgccgccgtgggccttgtcgccgtggaaggcgtcgaagttgaggt 462 ||||||| ||||||| ||||||||| |||||||||| |||||||||||||||||||||| Sbjct: 28952054 cggtgccatcgtggatgccgccgtgatccttgtcgccatggaaggcgtcgaagttgaggt 28951995 Query: 463 agatgttgttcaccatgcgcacgcagcnggaagcccttgcccac 506 ||||||||||||||||||| | ||||| |||||||||||||||| Sbjct: 28951994 agatgttgttcaccatgcggatgcagc-ggaagcccttgcccac 28951952 Score = 218 bits (110), Expect = 1e-53 Identities = 125/130 (96%) Strand = Plus / Minus Query: 352 ggatcttccagcgctggttgtcgccctcgcaccacttccagagcacgacctcggtgccgt 411 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 28956077 ggatcttccagcgctggttgtcgccctcgcaccacttccagagcacgatgtcggtgccgt 28956018 Query: 412 cgtggacgccgccgtgggccttgtcgccgtggaaggcgtcgaagttgaggtagatgttgt 471 || |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 28956017 cgcggacgccgccgtggtacttgtcgccgtggaaggcgtcgaagttgaggtagatgttgt 28955958 Query: 472 tcaccatgcg 481 |||||||||| Sbjct: 28955957 tcaccatgcg 28955948 Score = 212 bits (107), Expect = 8e-52 Identities = 137/147 (93%) Strand = Plus / Minus Query: 343 accaggggaggatcttccagcgctggttgtcgccctcgcaccacttccagagcacgacct 402 |||||||||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 28940904 accaggggaggatcttccagcgctggttgtcgcccttacaccactcccagagcacgacgg 28940845 Query: 403 cggtgccgtcgtggacgccgccgtgggccttgtcgccgtggaaggcgtcgaagttgaggt 462 ||||||||||||||||||||||||| |||||||||| ||||||||||| |||||||||| Sbjct: 28940844 tggtgccgtcgtggacgccgccgtggtccttgtcgccatggaaggcgtcaaagttgaggt 28940785 Query: 463 agatgttgttcaccatgcgcacgcagc 489 ||||||||||||||||||| ||||||| Sbjct: 28940784 agatgttgttcaccatgcggacgcagc 28940758 Score = 194 bits (98), Expect = 2e-46 Identities = 128/138 (92%) Strand = Plus / Minus Query: 344 ccaggggaggatcttccagcgctggttgtcgccctcgcaccacttccagagcacgacctc 403 |||||||||||||||||||| |||||||||||||| |||||||| |||||||||||| Sbjct: 28939901 ccaggggaggatcttccagcactggttgtcgcccttgcaccactcccagagcacgacggt 28939842 Query: 404 ggtgccgtcgtggacgccgccgtgggccttgtcgccgtggaaggcgtcgaagttgaggta 463 |||||||||||| ||||||||||||| ||||||||||||||||||||| ||||||||||| Sbjct: 28939841 ggtgccgtcgtgcacgccgccgtgggacttgtcgccgtggaaggcgtccaagttgaggta 28939782 Query: 464 gatgttgttcaccatgcg 481 ||||||||| |||||||| Sbjct: 28939781 gatgttgttgaccatgcg 28939764 Score = 186 bits (94), Expect = 5e-44 Identities = 149/166 (89%), Gaps = 1/166 (0%) Strand = Plus / Minus Query: 344 ccaggggaggatcttccagcgctggttgtcgccctcgcaccacttccagagcacgacctc 403 |||||||||||||||||||| |||||||||||||| |||||||| |||||||||||| Sbjct: 28951426 ccaggggaggatcttccagctctggttgtcgcccttgcaccactcccagagcacgacggt 28951367 Query: 404 ggtgccgtcgtggacgccgccgtgggccttgtcgccgtggaaggcgtcgaagttgaggta 463 |||||||||| |||||||||||||| |||||||||||||||||||||| ||||||||| Sbjct: 28951366 ggtgccgtcgcggacgccgccgtggtccttgtcgccgtggaaggcgtccaagttgaggcg 28951307 Query: 464 gatgttgttcaccatgcgcacgcagcnggaagcccttgcccacgtc 509 | ||||||| |||||||| | ||||| ||||||||||||| ||||| Sbjct: 28951306 ggtgttgttgaccatgcggatgcagc-ggaagcccttgccgacgtc 28951262
>dbj|AP005167.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0060O17 Length = 180015 Score = 230 bits (116), Expect = 4e-57 Identities = 153/164 (93%), Gaps = 1/164 (0%) Strand = Plus / Minus Query: 343 accaggggaggatcttccagcgctggttgtcgccctcgcaccacttccagagcacgacct 402 ||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||| || Sbjct: 69651 accaggggaggatcttccagcgctggttgtcaccctcgcaccacttccacagcacgatct 69592 Query: 403 cggtgccgtcgtggacgccgccgtgggccttgtcgccgtggaaggcgtcgaagttgaggt 462 ||||||| ||||||| ||||||||| |||||||||| |||||||||||||||||||||| Sbjct: 69591 cggtgccatcgtggatgccgccgtgatccttgtcgccatggaaggcgtcgaagttgaggt 69532 Query: 463 agatgttgttcaccatgcgcacgcagcnggaagcccttgcccac 506 ||||||||||||||||||| | ||||| |||||||||||||||| Sbjct: 69531 agatgttgttcaccatgcggatgcagc-ggaagcccttgcccac 69489 Score = 218 bits (110), Expect = 1e-53 Identities = 125/130 (96%) Strand = Plus / Minus Query: 352 ggatcttccagcgctggttgtcgccctcgcaccacttccagagcacgacctcggtgccgt 411 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 73614 ggatcttccagcgctggttgtcgccctcgcaccacttccagagcacgatgtcggtgccgt 73555 Query: 412 cgtggacgccgccgtgggccttgtcgccgtggaaggcgtcgaagttgaggtagatgttgt 471 || |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 73554 cgcggacgccgccgtggtacttgtcgccgtggaaggcgtcgaagttgaggtagatgttgt 73495 Query: 472 tcaccatgcg 481 |||||||||| Sbjct: 73494 tcaccatgcg 73485 Score = 212 bits (107), Expect = 8e-52 Identities = 137/147 (93%) Strand = Plus / Minus Query: 343 accaggggaggatcttccagcgctggttgtcgccctcgcaccacttccagagcacgacct 402 |||||||||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 58441 accaggggaggatcttccagcgctggttgtcgcccttacaccactcccagagcacgacgg 58382 Query: 403 cggtgccgtcgtggacgccgccgtgggccttgtcgccgtggaaggcgtcgaagttgaggt 462 ||||||||||||||||||||||||| |||||||||| ||||||||||| |||||||||| Sbjct: 58381 tggtgccgtcgtggacgccgccgtggtccttgtcgccatggaaggcgtcaaagttgaggt 58322 Query: 463 agatgttgttcaccatgcgcacgcagc 489 ||||||||||||||||||| ||||||| Sbjct: 58321 agatgttgttcaccatgcggacgcagc 58295 Score = 194 bits (98), Expect = 2e-46 Identities = 128/138 (92%) Strand = Plus / Minus Query: 344 ccaggggaggatcttccagcgctggttgtcgccctcgcaccacttccagagcacgacctc 403 |||||||||||||||||||| |||||||||||||| |||||||| |||||||||||| Sbjct: 57438 ccaggggaggatcttccagcactggttgtcgcccttgcaccactcccagagcacgacggt 57379 Query: 404 ggtgccgtcgtggacgccgccgtgggccttgtcgccgtggaaggcgtcgaagttgaggta 463 |||||||||||| ||||||||||||| ||||||||||||||||||||| ||||||||||| Sbjct: 57378 ggtgccgtcgtgcacgccgccgtgggacttgtcgccgtggaaggcgtccaagttgaggta 57319 Query: 464 gatgttgttcaccatgcg 481 ||||||||| |||||||| Sbjct: 57318 gatgttgttgaccatgcg 57301 Score = 186 bits (94), Expect = 5e-44 Identities = 149/166 (89%), Gaps = 1/166 (0%) Strand = Plus / Minus Query: 344 ccaggggaggatcttccagcgctggttgtcgccctcgcaccacttccagagcacgacctc 403 |||||||||||||||||||| |||||||||||||| |||||||| |||||||||||| Sbjct: 68963 ccaggggaggatcttccagctctggttgtcgcccttgcaccactcccagagcacgacggt 68904 Query: 404 ggtgccgtcgtggacgccgccgtgggccttgtcgccgtggaaggcgtcgaagttgaggta 463 |||||||||| |||||||||||||| |||||||||||||||||||||| ||||||||| Sbjct: 68903 ggtgccgtcgcggacgccgccgtggtccttgtcgccgtggaaggcgtccaagttgaggcg 68844 Query: 464 gatgttgttcaccatgcgcacgcagcnggaagcccttgcccacgtc 509 | ||||||| |||||||| | ||||| ||||||||||||| ||||| Sbjct: 68843 ggtgttgttgaccatgcggatgcagc-ggaagcccttgccgacgtc 68799
>emb|Y08987.1|OSR40G2 O.sativa osr40g2 gene Length = 2101 Score = 230 bits (116), Expect = 4e-57 Identities = 153/164 (93%), Gaps = 1/164 (0%) Strand = Plus / Minus Query: 343 accaggggaggatcttccagcgctggttgtcgccctcgcaccacttccagagcacgacct 402 ||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||| || Sbjct: 2041 accaggggaggatcttccagcgctggttgtcaccctcgcaccacttccacagcacgatct 1982 Query: 403 cggtgccgtcgtggacgccgccgtgggccttgtcgccgtggaaggcgtcgaagttgaggt 462 ||||||| ||||||| ||||||||| |||||||||| |||||||||||||||||||||| Sbjct: 1981 cggtgccatcgtggatgccgccgtgatccttgtcgccatggaaggcgtcgaagttgaggt 1922 Query: 463 agatgttgttcaccatgcgcacgcagcnggaagcccttgcccac 506 ||||||||||||||||||| | ||||| |||||||||||||||| Sbjct: 1921 agatgttgttcaccatgcggatgcagc-ggaagcccttgcccac 1879 Score = 186 bits (94), Expect = 5e-44 Identities = 149/166 (89%), Gaps = 1/166 (0%) Strand = Plus / Minus Query: 344 ccaggggaggatcttccagcgctggttgtcgccctcgcaccacttccagagcacgacctc 403 |||||||||||||||||||| |||||||||||||| |||||||| |||||||||||| Sbjct: 1353 ccaggggaggatcttccagctctggttgtcgcccttgcaccactcccagagcacgacggt 1294 Query: 404 ggtgccgtcgtggacgccgccgtgggccttgtcgccgtggaaggcgtcgaagttgaggta 463 |||||||||| |||||||||||||| |||||||||||||||||||||| ||||||||| Sbjct: 1293 ggtgccgtcgcggacgccgccgtggtccttgtcgccgtggaaggcgtccaagttgaggcg 1234 Query: 464 gatgttgttcaccatgcgcacgcagcnggaagcccttgcccacgtc 509 | ||||||| |||||||| | ||||| ||||||||||||| ||||| Sbjct: 1233 ggtgttgttgaccatgcggatgcagc-ggaagcccttgccgacgtc 1189
>gb|BT018342.1| Zea mays clone EL01T0403C03.c mRNA sequence Length = 690 Score = 228 bits (115), Expect = 1e-56 Identities = 155/167 (92%), Gaps = 1/167 (0%) Strand = Plus / Minus Query: 343 accaggggaggatcttccagcgctggttgtcgccctcgcaccacttccagagcacgacct 402 |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 319 accaagggaggatcttccagcgctggttgtcgccctcgcaccacttccagagcacgatct 260 Query: 403 cggtgccgtcgtggacgccgccgtgggccttgtcgccgtggaaggcgtcgaagttgaggt 462 |||| ||||| |||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 259 cggtaccgtcatggacgccgccgggggccttgtcgccgtggaaggcgtcgaagttgaggc 200 Query: 463 agatgttgttcaccatgcgcacgcagcnggaagcccttgcccacgtc 509 | ||||||| |||||||| | ||||| ||||||||||||||||||| Sbjct: 199 gggtgttgttgaccatgcggatgcagc-ggaagcccttgcccacgtc 154
>gb|BT016654.1| Zea mays clone Contig487 mRNA sequence Length = 905 Score = 224 bits (113), Expect = 2e-55 Identities = 156/169 (92%), Gaps = 1/169 (0%) Strand = Plus / Minus Query: 342 taccaggggaggatcttccagcgctggttgtcgccctcgcaccacttccagagcacgacc 401 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 558 taccaggggacgatcttccagcgctggttgtcgccctcgcaccacttccagagcacgatg 499 Query: 402 tcggtgccgtcgtggacgccgccgtgggccttgtcgccgtggaaggcgtcgaagttgagg 461 | |||||||||| | |||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 498 ttggtgccgtcgcgcacgccgccgtggtccttgtcgccgtggaaggcgtcgaagttgagg 439 Query: 462 tagatgttgttcaccatgcgcacgcagcnggaagcccttgcccacgtcg 510 ||||||||||| |||||||| ||||||| ||||||| | ||| |||||| Sbjct: 438 tagatgttgttgaccatgcggacgcagc-ggaagccgtggccgacgtcg 391
>ref|XM_479573.1| Oryza sativa (japonica cultivar-group), mRNA Length = 988 Score = 218 bits (110), Expect = 1e-53 Identities = 125/130 (96%) Strand = Plus / Minus Query: 352 ggatcttccagcgctggttgtcgccctcgcaccacttccagagcacgacctcggtgccgt 411 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 700 ggatcttccagcgctggttgtcgccctcgcaccacttccagagcacgatgtcggtgccgt 641 Query: 412 cgtggacgccgccgtgggccttgtcgccgtggaaggcgtcgaagttgaggtagatgttgt 471 || |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 640 cgcggacgccgccgtggtacttgtcgccgtggaaggcgtcgaagttgaggtagatgttgt 581 Query: 472 tcaccatgcg 481 |||||||||| Sbjct: 580 tcaccatgcg 571
>emb|Y08988.1|OSR40G3 O.sativa osr40g3 gene Length = 1531 Score = 218 bits (110), Expect = 1e-53 Identities = 125/130 (96%) Strand = Plus / Minus Query: 352 ggatcttccagcgctggttgtcgccctcgcaccacttccagagcacgacctcggtgccgt 411 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 1317 ggatcttccagcgctggttgtcgccctcgcaccacttccagagcacgatgtcggtgccgt 1258 Query: 412 cgtggacgccgccgtgggccttgtcgccgtggaaggcgtcgaagttgaggtagatgttgt 471 || |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 1257 cgcggacgccgccgtggtacttgtcgccgtggaaggcgtcgaagttgaggtagatgttgt 1198 Query: 472 tcaccatgcg 481 |||||||||| Sbjct: 1197 tcaccatgcg 1188
>dbj|AK072989.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023145K15, full insert sequence Length = 987 Score = 218 bits (110), Expect = 1e-53 Identities = 125/130 (96%) Strand = Plus / Minus Query: 352 ggatcttccagcgctggttgtcgccctcgcaccacttccagagcacgacctcggtgccgt 411 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 699 ggatcttccagcgctggttgtcgccctcgcaccacttccagagcacgatgtcggtgccgt 640 Query: 412 cgtggacgccgccgtgggccttgtcgccgtggaaggcgtcgaagttgaggtagatgttgt 471 || |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 639 cgcggacgccgccgtggtacttgtcgccgtggaaggcgtcgaagttgaggtagatgttgt 580 Query: 472 tcaccatgcg 481 |||||||||| Sbjct: 579 tcaccatgcg 570
>emb|X95402.1|OSOSR40C1 O.sativa mRNA for novel protein, osr40c1 Length = 1458 Score = 216 bits (109), Expect = 5e-53 Identities = 136/145 (93%) Strand = Plus / Minus Query: 337 gcatctaccaggggaggatcttccagcgctggttgtcgccctcgcaccacttccagagca 396 |||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1113 gcatttaccaggggacgatcttccagcgctggttgtcgccctcgcaccacttccagagcg 1054 Query: 397 cgacctcggtgccgtcgtggacgccgccgtgggccttgtcgccgtggaaggcgtcgaagt 456 |||| |||||||||| |||||||||||||| ||||||||||||||| ||||||||||| Sbjct: 1053 cgacggtggtgccgtcgcggacgccgccgtggtccttgtcgccgtggagggcgtcgaagt 994 Query: 457 tgaggtagatgttgttcaccatgcg 481 ||||||||||||||||||||||||| Sbjct: 993 tgaggtagatgttgttcaccatgcg 969 Score = 172 bits (87), Expect = 7e-40 Identities = 148/167 (88%), Gaps = 1/167 (0%) Strand = Plus / Minus Query: 344 ccaggggaggatcttccagcgctggttgtcgccctcgcaccacttccagagcacgacctc 403 |||||||||||||||||||| |||||||||||||| | ||||| ||||||||||| Sbjct: 599 ccaggggaggatcttccagcactggttgtcgcccttggcccactcccagagcacgatggt 540 Query: 404 ggtgccgtcgtggacgccgccgtgggccttgtcgccgtggaaggcgtcgaagttgaggta 463 |||||||||||| |||||||||||| |||||||||||||||| ||||||||||||||| Sbjct: 539 ggtgccgtcgtgcacgccgccgtggtccttgtcgccgtggaacgcgtcgaagttgaggcg 480 Query: 464 gatgttgttcaccatgcgcacgcagcnggaagcccttgcccacgtcg 510 ||||||||||| |||||| | ||||| |||||| ||||||||||||| Sbjct: 479 gatgttgttcagcatgcgaatgcagc-ggaagctcttgcccacgtcg 434
>dbj|AK069815.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023031K10, full insert sequence Length = 1765 Score = 216 bits (109), Expect = 5e-53 Identities = 136/145 (93%) Strand = Plus / Minus Query: 337 gcatctaccaggggaggatcttccagcgctggttgtcgccctcgcaccacttccagagca 396 |||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1126 gcatttaccaggggacgatcttccagcgctggttgtcgccctcgcaccacttccagagcg 1067 Query: 397 cgacctcggtgccgtcgtggacgccgccgtgggccttgtcgccgtggaaggcgtcgaagt 456 |||| |||||||||| |||||||||||||| ||||||||||||||| ||||||||||| Sbjct: 1066 cgacggtggtgccgtcgcggacgccgccgtggtccttgtcgccgtggagggcgtcgaagt 1007 Query: 457 tgaggtagatgttgttcaccatgcg 481 ||||||||||||||||||||||||| Sbjct: 1006 tgaggtagatgttgttcaccatgcg 982 Score = 172 bits (87), Expect = 7e-40 Identities = 148/167 (88%), Gaps = 1/167 (0%) Strand = Plus / Minus Query: 344 ccaggggaggatcttccagcgctggttgtcgccctcgcaccacttccagagcacgacctc 403 |||||||||||||||||||| |||||||||||||| | ||||| ||||||||||| Sbjct: 612 ccaggggaggatcttccagcactggttgtcgcccttggcccactcccagagcacgatggt 553 Query: 404 ggtgccgtcgtggacgccgccgtgggccttgtcgccgtggaaggcgtcgaagttgaggta 463 |||||||||||| |||||||||||| |||||||||||||||| ||||||||||||||| Sbjct: 552 ggtgccgtcgtgcacgccgccgtggtccttgtcgccgtggaacgcgtcgaagttgaggcg 493 Query: 464 gatgttgttcaccatgcgcacgcagcnggaagcccttgcccacgtcg 510 ||||||||||| |||||| | ||||| |||||| ||||||||||||| Sbjct: 492 gatgttgttcagcatgcggatgcagc-ggaagctcttgcccacgtcg 447
>gb|DQ022951.1| Triticum aestivum stress responsive protein mRNA, complete cds Length = 846 Score = 214 bits (108), Expect = 2e-52 Identities = 126/132 (95%) Strand = Plus / Minus Query: 356 cttccagcgctggttgtcgccctcgcaccacttccagagcacgacctcggtgccgtcgtg 415 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 592 cttccagcgctggttgtcgccctcgcaccacttccagagcacgacctcggtgccgtcgcg 533 Query: 416 gacgccgccgtgggccttgtcgccgtggaaggcgtcgaagttgaggtagatgttgttcac 475 |||||||||||| ||||||||||| || |||||||||||||||||||||||||||||| Sbjct: 532 cacgccgccgtggtacttgtcgccgttgagggcgtcgaagttgaggtagatgttgttcac 473 Query: 476 catgcgcacgca 487 |||||||||||| Sbjct: 472 catgcgcacgca 461
>ref|NM_187532.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1122 Score = 212 bits (107), Expect = 8e-52 Identities = 131/139 (94%) Strand = Plus / Minus Query: 343 accaggggaggatcttccagcgctggttgtcgccctcgcaccacttccagagcacgacct 402 ||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 1045 accaggggacgatcttccagcgctggttgtcgccctcgcaccacttccagagcgcgacgg 986 Query: 403 cggtgccgtcgtggacgccgccgtgggccttgtcgccgtggaaggcgtcgaagttgaggt 462 |||||||||| |||||||||||||| ||||||||||||||| ||||||||||||||||| Sbjct: 985 tggtgccgtcgcggacgccgccgtggtccttgtcgccgtggagggcgtcgaagttgaggt 926 Query: 463 agatgttgttcaccatgcg 481 ||||||||||||||||||| Sbjct: 925 agatgttgttcaccatgcg 907 Score = 172 bits (87), Expect = 7e-40 Identities = 148/167 (88%), Gaps = 1/167 (0%) Strand = Plus / Minus Query: 344 ccaggggaggatcttccagcgctggttgtcgccctcgcaccacttccagagcacgacctc 403 |||||||||||||||||||| |||||||||||||| | ||||| ||||||||||| Sbjct: 537 ccaggggaggatcttccagcactggttgtcgcccttggcccactcccagagcacgatggt 478 Query: 404 ggtgccgtcgtggacgccgccgtgggccttgtcgccgtggaaggcgtcgaagttgaggta 463 |||||||||||| |||||||||||| |||||||||||||||| ||||||||||||||| Sbjct: 477 ggtgccgtcgtgcacgccgccgtggtccttgtcgccgtggaacgcgtcgaagttgaggcg 418 Query: 464 gatgttgttcaccatgcgcacgcagcnggaagcccttgcccacgtcg 510 ||||||||||| |||||| | ||||| |||||| ||||||||||||| Sbjct: 417 gatgttgttcagcatgcggatgcagc-ggaagctcttgcccacgtcg 372
>ref|XM_479570.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1209 Score = 212 bits (107), Expect = 8e-52 Identities = 137/147 (93%) Strand = Plus / Minus Query: 343 accaggggaggatcttccagcgctggttgtcgccctcgcaccacttccagagcacgacct 402 |||||||||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 1201 accaggggaggatcttccagcgctggttgtcgcccttacaccactcccagagcacgacgg 1142 Query: 403 cggtgccgtcgtggacgccgccgtgggccttgtcgccgtggaaggcgtcgaagttgaggt 462 ||||||||||||||||||||||||| |||||||||| ||||||||||| |||||||||| Sbjct: 1141 tggtgccgtcgtggacgccgccgtggtccttgtcgccatggaaggcgtcaaagttgaggt 1082 Query: 463 agatgttgttcaccatgcgcacgcagc 489 ||||||||||||||||||| ||||||| Sbjct: 1081 agatgttgttcaccatgcggacgcagc 1055 Score = 194 bits (98), Expect = 2e-46 Identities = 128/138 (92%) Strand = Plus / Minus Query: 344 ccaggggaggatcttccagcgctggttgtcgccctcgcaccacttccagagcacgacctc 403 |||||||||||||||||||| |||||||||||||| |||||||| |||||||||||| Sbjct: 512 ccaggggaggatcttccagcactggttgtcgcccttgcaccactcccagagcacgacggt 453 Query: 404 ggtgccgtcgtggacgccgccgtgggccttgtcgccgtggaaggcgtcgaagttgaggta 463 |||||||||||| ||||||||||||| ||||||||||||||||||||| ||||||||||| Sbjct: 452 ggtgccgtcgtgcacgccgccgtgggacttgtcgccgtggaaggcgtccaagttgaggta 393 Query: 464 gatgttgttcaccatgcg 481 ||||||||| |||||||| Sbjct: 392 gatgttgttgaccatgcg 375
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 212 bits (107), Expect = 8e-52 Identities = 131/139 (94%) Strand = Plus / Plus Query: 343 accaggggaggatcttccagcgctggttgtcgccctcgcaccacttccagagcacgacct 402 ||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 11931354 accaggggacgatcttccagcgctggttgtcgccctcgcaccacttccagagcgcgacgg 11931413 Query: 403 cggtgccgtcgtggacgccgccgtgggccttgtcgccgtggaaggcgtcgaagttgaggt 462 |||||||||| |||||||||||||| ||||||||||||||| ||||||||||||||||| Sbjct: 11931414 tggtgccgtcgcggacgccgccgtggtccttgtcgccgtggagggcgtcgaagttgaggt 11931473 Query: 463 agatgttgttcaccatgcg 481 ||||||||||||||||||| Sbjct: 11931474 agatgttgttcaccatgcg 11931492 Score = 172 bits (87), Expect = 7e-40 Identities = 148/167 (88%), Gaps = 1/167 (0%) Strand = Plus / Plus Query: 344 ccaggggaggatcttccagcgctggttgtcgccctcgcaccacttccagagcacgacctc 403 |||||||||||||||||||| |||||||||||||| | ||||| ||||||||||| Sbjct: 11931971 ccaggggaggatcttccagcactggttgtcgcccttggcccactcccagagcacgatggt 11932030 Query: 404 ggtgccgtcgtggacgccgccgtgggccttgtcgccgtggaaggcgtcgaagttgaggta 463 |||||||||||| |||||||||||| |||||||||||||||| ||||||||||||||| Sbjct: 11932031 ggtgccgtcgtgcacgccgccgtggtccttgtcgccgtggaacgcgtcgaagttgaggcg 11932090 Query: 464 gatgttgttcaccatgcgcacgcagcnggaagcccttgcccacgtcg 510 ||||||||||| |||||| | ||||| |||||| ||||||||||||| Sbjct: 11932091 gatgttgttcagcatgcggatgcagc-ggaagctcttgcccacgtcg 11932136
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 212 bits (107), Expect = 8e-52 Identities = 131/139 (94%) Strand = Plus / Plus Query: 343 accaggggaggatcttccagcgctggttgtcgccctcgcaccacttccagagcacgacct 402 ||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 11928117 accaggggacgatcttccagcgctggttgtcgccctcgcaccacttccagagcgcgacgg 11928176 Query: 403 cggtgccgtcgtggacgccgccgtgggccttgtcgccgtggaaggcgtcgaagttgaggt 462 |||||||||| |||||||||||||| ||||||||||||||| ||||||||||||||||| Sbjct: 11928177 tggtgccgtcgcggacgccgccgtggtccttgtcgccgtggagggcgtcgaagttgaggt 11928236 Query: 463 agatgttgttcaccatgcg 481 ||||||||||||||||||| Sbjct: 11928237 agatgttgttcaccatgcg 11928255 Score = 172 bits (87), Expect = 7e-40 Identities = 148/167 (88%), Gaps = 1/167 (0%) Strand = Plus / Plus Query: 344 ccaggggaggatcttccagcgctggttgtcgccctcgcaccacttccagagcacgacctc 403 |||||||||||||||||||| |||||||||||||| | ||||| ||||||||||| Sbjct: 11928734 ccaggggaggatcttccagcactggttgtcgcccttggcccactcccagagcacgatggt 11928793 Query: 404 ggtgccgtcgtggacgccgccgtgggccttgtcgccgtggaaggcgtcgaagttgaggta 463 |||||||||||| |||||||||||| |||||||||||||||| ||||||||||||||| Sbjct: 11928794 ggtgccgtcgtgcacgccgccgtggtccttgtcgccgtggaacgcgtcgaagttgaggcg 11928853 Query: 464 gatgttgttcaccatgcgcacgcagcnggaagcccttgcccacgtcg 510 ||||||||||| |||||| | ||||| |||||| ||||||||||||| Sbjct: 11928854 gatgttgttcagcatgcggatgcagc-ggaagctcttgcccacgtcg 11928899
>gb|AC126222.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0014I10, complete sequence Length = 113946 Score = 212 bits (107), Expect = 8e-52 Identities = 131/139 (94%) Strand = Plus / Plus Query: 343 accaggggaggatcttccagcgctggttgtcgccctcgcaccacttccagagcacgacct 402 ||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 32616 accaggggacgatcttccagcgctggttgtcgccctcgcaccacttccagagcgcgacgg 32675 Query: 403 cggtgccgtcgtggacgccgccgtgggccttgtcgccgtggaaggcgtcgaagttgaggt 462 |||||||||| |||||||||||||| ||||||||||||||| ||||||||||||||||| Sbjct: 32676 tggtgccgtcgcggacgccgccgtggtccttgtcgccgtggagggcgtcgaagttgaggt 32735 Query: 463 agatgttgttcaccatgcg 481 ||||||||||||||||||| Sbjct: 32736 agatgttgttcaccatgcg 32754 Score = 172 bits (87), Expect = 7e-40 Identities = 148/167 (88%), Gaps = 1/167 (0%) Strand = Plus / Plus Query: 344 ccaggggaggatcttccagcgctggttgtcgccctcgcaccacttccagagcacgacctc 403 |||||||||||||||||||| |||||||||||||| | ||||| ||||||||||| Sbjct: 33233 ccaggggaggatcttccagcactggttgtcgcccttggcccactcccagagcacgatggt 33292 Query: 404 ggtgccgtcgtggacgccgccgtgggccttgtcgccgtggaaggcgtcgaagttgaggta 463 |||||||||||| |||||||||||| |||||||||||||||| ||||||||||||||| Sbjct: 33293 ggtgccgtcgtgcacgccgccgtggtccttgtcgccgtggaacgcgtcgaagttgaggcg 33352 Query: 464 gatgttgttcaccatgcgcacgcagcnggaagcccttgcccacgtcg 510 ||||||||||| |||||| | ||||| |||||| ||||||||||||| Sbjct: 33353 gatgttgttcagcatgcggatgcagc-ggaagctcttgcccacgtcg 33398
>gb|BT018086.1| Zea mays clone EL01N0552C09.c mRNA sequence Length = 666 Score = 204 bits (103), Expect = 2e-49 Identities = 146/159 (91%), Gaps = 1/159 (0%) Strand = Plus / Minus Query: 352 ggatcttccagcgctggttgtcgccctcgcaccacttccagagcacgacctcggtgccgt 411 ||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||| Sbjct: 425 ggatcttccagcgctggttgtcgccctcgcaccacttccagagcacgacgttggtgccgt 366 Query: 412 cgtggacgccgccgtgggccttgtcgccgtggaaggcgtcgaagttgaggtagatgttgt 471 | ||||||||||||| |||||||||||||| |||||||||||||||||||||||||| Sbjct: 365 cacggacgccgccgtgccacttgtcgccgtggagggcgtcgaagttgaggtagatgttgt 306 Query: 472 tcaccatgcgcacgcagcnggaagcccttgcccacgtcg 510 | |||||||| ||||||| ||||||| ||||| |||||| Sbjct: 305 tgaccatgcggacgcagc-ggaagccgttgccgacgtcg 268
>gb|BT017211.1| Zea mays clone EL01N0372B08.c mRNA sequence Length = 567 Score = 184 bits (93), Expect = 2e-43 Identities = 151/169 (89%), Gaps = 1/169 (0%) Strand = Plus / Minus Query: 342 taccaggggaggatcttccagcgctggttgtcgccctcgcaccacttccagagcacgacc 401 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 242 taccaggggacgatcttccagcgctggttgtcgccctcgcaccacttccagagcacgatg 183 Query: 402 tcggtgccgtcgtggacgccgccgtgggccttgtcgccgtggaaggcgtcgaagttgagg 461 | || ||||||| | |||||||||||| |||||||||||||||||| ||| || |||||| Sbjct: 182 ttggggccgtcgcgcacgccgccgtggtccttgtcgccgtggaaggggtccaaattgagg 123 Query: 462 tagatgttgttcaccatgcgcacgcagcnggaagcccttgcccacgtcg 510 || |||||||| |||||||| ||||||| ||||||| | ||| |||||| Sbjct: 122 taaatgttgttgaccatgcggacgcagc-ggaagccgtggccgacgtcg 75
>gb|BT017376.1| Zea mays clone EL01N0325G07.c mRNA sequence Length = 778 Score = 180 bits (91), Expect = 3e-42 Identities = 149/167 (89%), Gaps = 1/167 (0%) Strand = Plus / Minus Query: 344 ccaggggaggatcttccagcgctggttgtcgccctcgcaccacttccagagcacgacctc 403 |||||| ||||||||||||| |||||||||||||| | ||||| ||| ||||| || Sbjct: 691 ccagggcaggatcttccagctctggttgtcgcccttggcccactcccacagcaccacggt 632 Query: 404 ggtgccgtcgtggacgccgccgtgggccttgtcgccgtggaaggcgtcgaagttgaggta 463 |||||||||||| |||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 631 ggtgccgtcgtgcacgccgccgtggcccttgtcgccgtggaaggcgtcgaagttgaggcg 572 Query: 464 gatgttgttcaccatgcgcacgcagcnggaagcccttgcccacgtcg 510 |||||||||||||||||| | ||||| |||||||||||||||||||| Sbjct: 571 gatgttgttcaccatgcggatgcagc-ggaagcccttgcccacgtcg 526
>ref|NM_183466.2| Oryza sativa (japonica cultivar-group), mRNA Length = 1093 Score = 129 bits (65), Expect = 1e-26 Identities = 110/125 (88%) Strand = Plus / Minus Query: 354 atcttccagcgctggttgtcgccctcgcaccacttccagagcacgacctcggtgccgtcg 413 |||||||||||||||||||| ||||||||||||| ||||||||| | ||| |||||| Sbjct: 797 atcttccagcgctggttgtcaccctcgcaccactcccagagcaccagggtggttccgtcg 738 Query: 414 tggacgccgccgtgggccttgtcgccgtggaaggcgtcgaagttgaggtagatgttgttc 473 | |||||||||||| ||||||| || |||| ||||||||||||||||||||||||||| Sbjct: 737 cgcacgccgccgtggtccttgtctccatggagcgcgtcgaagttgaggtagatgttgttc 678 Query: 474 accat 478 ||||| Sbjct: 677 accat 673
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 129 bits (65), Expect = 1e-26 Identities = 110/125 (88%) Strand = Plus / Minus Query: 354 atcttccagcgctggttgtcgccctcgcaccacttccagagcacgacctcggtgccgtcg 413 |||||||||||||||||||| ||||||||||||| ||||||||| | ||| |||||| Sbjct: 227774 atcttccagcgctggttgtcaccctcgcaccactcccagagcaccagggtggttccgtcg 227715 Query: 414 tggacgccgccgtgggccttgtcgccgtggaaggcgtcgaagttgaggtagatgttgttc 473 | |||||||||||| ||||||| || |||| ||||||||||||||||||||||||||| Sbjct: 227714 cgcacgccgccgtggtccttgtctccatggagcgcgtcgaagttgaggtagatgttgttc 227655 Query: 474 accat 478 ||||| Sbjct: 227654 accat 227650
>dbj|AP002818.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0436E04 Length = 144644 Score = 129 bits (65), Expect = 1e-26 Identities = 110/125 (88%) Strand = Plus / Minus Query: 354 atcttccagcgctggttgtcgccctcgcaccacttccagagcacgacctcggtgccgtcg 413 |||||||||||||||||||| ||||||||||||| ||||||||| | ||| |||||| Sbjct: 69444 atcttccagcgctggttgtcaccctcgcaccactcccagagcaccagggtggttccgtcg 69385 Query: 414 tggacgccgccgtgggccttgtcgccgtggaaggcgtcgaagttgaggtagatgttgttc 473 | |||||||||||| ||||||| || |||| ||||||||||||||||||||||||||| Sbjct: 69384 cgcacgccgccgtggtccttgtctccatggagcgcgtcgaagttgaggtagatgttgttc 69325 Query: 474 accat 478 ||||| Sbjct: 69324 accat 69320
>dbj|AK104820.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-041-A11, full insert sequence Length = 1093 Score = 129 bits (65), Expect = 1e-26 Identities = 110/125 (88%) Strand = Plus / Minus Query: 354 atcttccagcgctggttgtcgccctcgcaccacttccagagcacgacctcggtgccgtcg 413 |||||||||||||||||||| ||||||||||||| ||||||||| | ||| |||||| Sbjct: 797 atcttccagcgctggttgtcaccctcgcaccactcccagagcaccagggtggttccgtcg 738 Query: 414 tggacgccgccgtgggccttgtcgccgtggaaggcgtcgaagttgaggtagatgttgttc 473 | |||||||||||| ||||||| || |||| ||||||||||||||||||||||||||| Sbjct: 737 cgcacgccgccgtggtccttgtctccatggagcgcgtcgaagttgaggtagatgttgttc 678 Query: 474 accat 478 ||||| Sbjct: 677 accat 673
>dbj|AK104555.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-305-F10, full insert sequence Length = 1088 Score = 129 bits (65), Expect = 1e-26 Identities = 110/125 (88%) Strand = Plus / Minus Query: 354 atcttccagcgctggttgtcgccctcgcaccacttccagagcacgacctcggtgccgtcg 413 |||||||||||||||||||| ||||||||||||| ||||||||| | ||| |||||| Sbjct: 794 atcttccagcgctggttgtcaccctcgcaccactcccagagcaccagggtggttccgtcg 735 Query: 414 tggacgccgccgtgggccttgtcgccgtggaaggcgtcgaagttgaggtagatgttgttc 473 | |||||||||||| ||||||| || |||| ||||||||||||||||||||||||||| Sbjct: 734 cgcacgccgccgtggtccttgtctccatggagcgcgtcgaagttgaggtagatgttgttc 675 Query: 474 accat 478 ||||| Sbjct: 674 accat 670
>dbj|AK071375.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023095C18, full insert sequence Length = 1392 Score = 129 bits (65), Expect = 1e-26 Identities = 110/125 (88%) Strand = Plus / Minus Query: 354 atcttccagcgctggttgtcgccctcgcaccacttccagagcacgacctcggtgccgtcg 413 |||||||||||||||||||| ||||||||||||| ||||||||| | ||| |||||| Sbjct: 1080 atcttccagcgctggttgtcaccctcgcaccactcccagagcaccagggtggttccgtcg 1021 Query: 414 tggacgccgccgtgggccttgtcgccgtggaaggcgtcgaagttgaggtagatgttgttc 473 | |||||||||||| ||||||| || |||| ||||||||||||||||||||||||||| Sbjct: 1020 cgcacgccgccgtggtccttgtctccatggagcgcgtcgaagttgaggtagatgttgttc 961 Query: 474 accat 478 ||||| Sbjct: 960 accat 956
>dbj|AK060132.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-C04, full insert sequence Length = 1220 Score = 129 bits (65), Expect = 1e-26 Identities = 110/125 (88%) Strand = Plus / Minus Query: 354 atcttccagcgctggttgtcgccctcgcaccacttccagagcacgacctcggtgccgtcg 413 |||||||||||||||||||| ||||||||||||| ||||||||| | ||| |||||| Sbjct: 837 atcttccagcgctggttgtcaccctcgcaccactcccagagcaccagggtggttccgtcg 778 Query: 414 tggacgccgccgtgggccttgtcgccgtggaaggcgtcgaagttgaggtagatgttgttc 473 | |||||||||||| ||||||| || |||| ||||||||||||||||||||||||||| Sbjct: 777 cgcacgccgccgtggtccttgtctccatggagcgcgtcgaagttgaggtagatgttgttc 718 Query: 474 accat 478 ||||| Sbjct: 717 accat 713
>gb|DQ083207.1| Oryza sativa (indica cultivar-group) clone 6S8A23 mRNA sequence Length = 332 Score = 63.9 bits (32), Expect = 5e-07 Identities = 38/40 (95%) Strand = Plus / Minus Query: 337 gcatctaccaggggaggatcttccagcgctggttgtcgcc 376 |||| |||||||||| |||||||||||||||||||||||| Sbjct: 40 gcatttaccaggggacgatcttccagcgctggttgtcgcc 1
>gb|AC131375.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0015J03, complete sequence Length = 165933 Score = 48.1 bits (24), Expect = 0.028 Identities = 27/28 (96%) Strand = Plus / Plus Query: 442 ggaaggcgtcgaagttgaggtagatgtt 469 |||||| ||||||||||||||||||||| Sbjct: 161960 ggaaggtgtcgaagttgaggtagatgtt 161987
>gb|AC090488.3| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0081F12 from chromosome 10, complete sequence Length = 128388 Score = 48.1 bits (24), Expect = 0.028 Identities = 27/28 (96%) Strand = Plus / Plus Query: 442 ggaaggcgtcgaagttgaggtagatgtt 469 |||||| ||||||||||||||||||||| Sbjct: 56027 ggaaggtgtcgaagttgaggtagatgtt 56054
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 48.1 bits (24), Expect = 0.028 Identities = 27/28 (96%) Strand = Plus / Plus Query: 442 ggaaggcgtcgaagttgaggtagatgtt 469 |||||| ||||||||||||||||||||| Sbjct: 4394419 ggaaggtgtcgaagttgaggtagatgtt 4394446
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 48.1 bits (24), Expect = 0.028 Identities = 27/28 (96%) Strand = Plus / Plus Query: 442 ggaaggcgtcgaagttgaggtagatgtt 469 |||||| ||||||||||||||||||||| Sbjct: 4395240 ggaaggtgtcgaagttgaggtagatgtt 4395267
>gb|AE005061.1| Halobacterium sp. NRC-1 section 92 of 170 of the complete genome Length = 13579 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 405 gtgccgtcgtggacgccgccg 425 ||||||||||||||||||||| Sbjct: 9876 gtgccgtcgtggacgccgccg 9896
>ref|NM_129462.2| Arabidopsis thaliana unknown protein AT2G39050 mRNA, complete cds Length = 1271 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 353 gatcttccagcgctggttgtcgcc 376 |||||||||| ||||||||||||| Sbjct: 966 gatcttccagagctggttgtcgcc 943
>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome Length = 3345170 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 402 tcggtgccgtcgtggacgccgccg 425 ||||||||||||| |||||||||| Sbjct: 194825 tcggtgccgtcgttgacgccgccg 194802
>gb|AC120856.6| Mus musculus chromosome 1, clone RP23-284B21, complete sequence Length = 261249 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 327 tcctggtacagcatctacca 346 |||||||||||||||||||| Sbjct: 62875 tcctggtacagcatctacca 62894
>emb|AL136992.22| Human DNA sequence from clone RP11-400P21 on chromosome 20 Contains the SCYE1P gene for small inducible cytokine subfamily E member 1 (endothelial-monocyte activating) pseudogene, complete sequence Length = 163681 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 76 tccctccccactctctccaa 95 |||||||||||||||||||| Sbjct: 113352 tccctccccactctctccaa 113333
>emb|BX572099.1| Prochlorococcus marinus MIT9313 complete genome; segment 5/7 Length = 349746 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 308 gatggcaatgcagcagatct 327 |||||||||||||||||||| Sbjct: 78899 gatggcaatgcagcagatct 78918
>gb|AY118445.1| Drosophila melanogaster SD10002 full insert cDNA Length = 1950 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 203 gctagcagcagcaggaggac 222 |||||||||||||||||||| Sbjct: 1423 gctagcagcagcaggaggac 1404
>ref|NM_170106.2| Drosophila melanogaster CG5902-RB, transcript variant B (CG5902), mRNA Length = 1736 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 203 gctagcagcagcaggaggac 222 |||||||||||||||||||| Sbjct: 1228 gctagcagcagcaggaggac 1209
>gb|AC069547.7| Homo sapiens chromosome 10 clone RP11-521C22, complete sequence Length = 189144 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 79 ctccccactctctccaacac 98 |||||||||||||||||||| Sbjct: 54241 ctccccactctctccaacac 54260
>dbj|AP007151.1| Aspergillus oryzae RIB40 genomic DNA, SC005 Length = 4429080 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 90 ctccaacaccctcttcttcc 109 |||||||||||||||||||| Sbjct: 3314594 ctccaacaccctcttcttcc 3314575
>ref|NM_142944.2| Drosophila melanogaster CG5902-RA, transcript variant A (CG5902), mRNA Length = 1934 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 203 gctagcagcagcaggaggac 222 |||||||||||||||||||| Sbjct: 1426 gctagcagcagcaggaggac 1407
>gb|AC005770.3| Arabidopsis thaliana chromosome 2 clone T7F6 map CIC10A06, complete sequence Length = 96827 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 353 gatcttccagcgctggttgtcgcc 376 |||||||||| ||||||||||||| Sbjct: 77194 gatcttccagagctggttgtcgcc 77171
>gb|AY093795.1| Arabidopsis thaliana At2g39050/T7F6.22 mRNA, complete cds Length = 954 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 353 gatcttccagcgctggttgtcgcc 376 |||||||||| ||||||||||||| Sbjct: 942 gatcttccagagctggttgtcgcc 919
>gb|AF411801.1|AF411801 Arabidopsis thaliana At2g39050/T7F6.22 mRNA, complete cds Length = 1209 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 353 gatcttccagcgctggttgtcgcc 376 |||||||||| ||||||||||||| Sbjct: 966 gatcttccagagctggttgtcgcc 943
>gb|AC007929.8|AC007929 Drosophila melanogaster, chromosome 3R, region 95A-95C, BAC clone BACR05C11, complete sequence Length = 171376 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 203 gctagcagcagcaggaggac 222 |||||||||||||||||||| Sbjct: 153673 gctagcagcagcaggaggac 153654
>emb|BX819436.1|CNS0A8S2 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB77ZF10 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1226 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 353 gatcttccagcgctggttgtcgcc 376 |||||||||| ||||||||||||| Sbjct: 952 gatcttccagagctggttgtcgcc 929
>gb|AC008202.4|AC008202 Drosophila melanogaster, chromosome 3R, region 95C-95D, BAC clone BACR15J11, complete sequence Length = 186159 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 203 gctagcagcagcaggaggac 222 |||||||||||||||||||| Sbjct: 56677 gctagcagcagcaggaggac 56658
>gb|AY087909.1| Arabidopsis thaliana clone 39558 mRNA, complete sequence Length = 1186 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 353 gatcttccagcgctggttgtcgcc 376 |||||||||| ||||||||||||| Sbjct: 966 gatcttccagagctggttgtcgcc 943
>gb|AC154121.6| Mus musculus chromosome 1, clone RP24-93A17, complete sequence Length = 228353 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 327 tcctggtacagcatctacca 346 |||||||||||||||||||| Sbjct: 102587 tcctggtacagcatctacca 102568
>gb|AE004998.1| Halobacterium sp. NRC-1 section 29 of 170 of the complete genome Length = 10309 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 395 cacgacctcggtgccgtcgt 414 |||||||||||||||||||| Sbjct: 2145 cacgacctcggtgccgtcgt 2126
>gb|AE003745.4| Drosophila melanogaster chromosome 3R, section 83 of 118 of the complete sequence Length = 230236 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 203 gctagcagcagcaggaggac 222 |||||||||||||||||||| Sbjct: 186565 gctagcagcagcaggaggac 186546
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 418 cgccgccgtgggccttgtcgccgt 441 |||||||||||| ||||||||||| Sbjct: 4210448 cgccgccgtgggtcttgtcgccgt 4210471
>gb|AC132614.3| Mus musculus BAC clone RP23-298K1 from 6, complete sequence Length = 198160 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 93 caacaccctcttcttcctcg 112 |||||||||||||||||||| Sbjct: 133740 caacaccctcttcttcctcg 133721
>emb|AL627073.15| Mouse DNA sequence from clone RP23-234E14 on chromosome 4, complete sequence Length = 137991 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 326 ctcctggtacagcatctacc 345 |||||||||||||||||||| Sbjct: 85405 ctcctggtacagcatctacc 85386 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,551,935 Number of Sequences: 3902068 Number of extensions: 3551935 Number of successful extensions: 77770 Number of sequences better than 10.0: 61 Number of HSP's better than 10.0 without gapping: 61 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 77323 Number of HSP's gapped (non-prelim): 411 length of query: 510 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 488 effective length of database: 17,147,199,772 effective search space: 8367833488736 effective search space used: 8367833488736 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)