ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal15p22
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ref|NM_194876.1| Oryza sativa (japonica cultivar-group) putative... 504 e-139
2gb|BT018606.1| Zea mays clone EL01N0450E05.d mRNA sequence 385 e-103
3gb|AY104865.1| Zea mays PCO099871 mRNA sequence 385 e-103
4dbj|AK066347.1| Oryza sativa (japonica cultivar-group) cDNA clon... 357 3e-95
5gb|AC098565.3| Oryza sativa chromosome 10 clone OSJNBa0028C16, c... 210 4e-51
6dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 210 4e-51
7gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 210 4e-51
8gb|AC146948.2| Oryza sativa (japonica cultivar-group) chromosome... 178 2e-41
9dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 178 2e-41
10gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 178 2e-41
11ref|NM_116309.2| Arabidopsis thaliana RNA binding / nucleic acid... 62 3e-06
12ref|NM_001036489.1| Arabidopsis thaliana RNA binding / nucleic a... 62 3e-06
13emb|AL161472.2|ATCHRIV2 Arabidopsis thaliana DNA chromosome 4, c... 62 3e-06
14gb|AY113171.1| Arabidopsis thaliana AT4g00830/A_TM018A10_14 mRNA... 62 3e-06
15gb|AF367357.1| Arabidopsis thaliana AT4g00830/A_TM018A10_14 mRNA... 62 3e-06
16gb|AF013294.1|TM018A10 Arabidopsis thaliana BAC TM018A10 62 3e-06
17dbj|AP004939.1| Lotus japonicus genomic DNA, chromosome 1, clone... 60 1e-05
18gb|AC139854.21| Medicago truncatula clone mth2-16e16, complete s... 54 6e-04
19emb|BX827625.1|CNS0A4H2 Arabidopsis thaliana Full-length cDNA Co... 50 0.010
20emb|BX826993.1|CNS0A37N Arabidopsis thaliana Full-length cDNA Co... 50 0.010
21gb|BT013793.1| Lycopersicon esculentum clone 132713F, mRNA sequence 46 0.15
22ref|XM_542593.2| PREDICTED: Canis familiaris similar to Diaphano... 44 0.59
23ref|XM_852251.1| PREDICTED: Canis familiaris similar to Diaphano... 44 0.59
24gb|AF495972.1| Drosophila simulans strain New Caledonia CG3588 (... 44 0.59
25emb|AL935149.16| Mouse DNA sequence from clone RP23-70N3 on chro... 44 0.59
26dbj|AK138958.1| Mus musculus adult male aorta and vein cDNA, RIK... 44 0.59
27dbj|AK014679.1| Mus musculus 0 day neonate head cDNA, RIKEN full... 44 0.59
28ref|XM_481319.1| Oryza sativa (japonica cultivar-group), mRNA 42 2.3
29gb|AC145808.2| Oryza sativa (japonica cultivar-group) chromosome... 42 2.3
30gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome 42 2.3
31gb|AC161187.5| Mus musculus chromosome 5, clone RP23-297H22, com... 42 2.3
32gb|AC138288.13| Mus musculus chromosome 9, clone RP23-464K22, co... 42 2.3
33gb|AC110251.11| Mus musculus chromosome 5, clone RP23-263O8, com... 42 2.3
34emb|AL645665.11| Human DNA sequence from clone RP11-963P9 on chr... 42 2.3
35emb|AL451107.6| Human DNA sequence from clone RP11-14C22 on chro... 42 2.3
36emb|BX842572.1| Mycobacterium tuberculosis H37Rv complete genome... 42 2.3
37emb|BX248334.1| Mycobacterium bovis subsp. bovis AF2122/97 compl... 42 2.3
38emb|BX897692.16| Zebrafish DNA sequence from clone DKEY-34F9 in ... 42 2.3
39gb|AC160983.2| Mus musculus BAC clone RP23-335A9 from chromosome... 42 2.3
40dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.3
41dbj|AP005383.3| Oryza sativa (japonica cultivar-group) genomic D... 42 2.3
42dbj|AP004694.3| Oryza sativa (japonica cultivar-group) genomic D... 42 2.3
43emb|AJ404349.1|HIM404349 Human immunodeficiency virus type 1 pro... 42 2.3
44dbj|AK120164.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 2.3
45dbj|AK101041.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 2.3
46dbj|AK073557.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 2.3
47emb|BX927177.12| Zebrafish DNA sequence from clone DKEY-78D16 in... 42 2.3
48ref|XM_422691.1| PREDICTED: Gallus gallus hypothetical gene supp... 40 9.3
49gb|AC101844.7| Mus musculus chromosome 7, clone RP23-257M22, com... 40 9.3
50gb|AE002124.1| Ureaplasma parvum serovar 3 str. ATCC 700970 sect... 40 9.3
51gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 9.3
52gb|AC024204.1| Caenorhabditis elegans cosmid Y73B6A, complete se... 40 9.3
53gb|AC109992.6| Homo sapiens 3 BAC RP11-383G6 (Roswell Park Cance... 40 9.3
54emb|AL163300.2|HS21C100 Homo sapiens chromosome 21 segment HS21C100 40 9.3
55emb|Z99289.1|HS142L7 Human DNA sequence from clone RP1-142L7 on ... 40 9.3
56emb|Z86090.10|HS229A8 Human DNA sequence from clone CTA-229A8 on... 40 9.3
57emb|AL356415.26| Human DNA sequence from clone RP3-337D23 on chr... 40 9.3
58emb|AL137021.15| Human DNA sequence from clone RP11-202A15 on ch... 40 9.3
59emb|AL079338.16|HSJ841K13 Human DNA sequence from clone RP5-841K... 40 9.3
60emb|AL031286.2|HS681J21 Human DNA sequence from clone RP4-681J21... 40 9.3
61gb|AC117470.8| Homo sapiens 3 BAC RP11-529P9 (Roswell Park Cance... 40 9.3
62gb|AC113173.2| Homo sapiens chromosome 1 clone RP4-724N10, compl... 40 9.3
63dbj|AK024377.1| Homo sapiens cDNA FLJ14315 fis, clone PLACE3000373 40 9.3
64gb|AC011155.13| Homo sapiens chromosome 18, clone RP11-7K9, comp... 40 9.3
65gb|AC106811.2| Homo sapiens chromosome 5 clone RP11-551B15, comp... 40 9.3
66gb|AC021146.7| Homo sapiens BAC clone RP11-468N14 from 4, comple... 40 9.3
67gb|AC091647.4| Homo sapiens chromosome 18, clone RP11-635D8, com... 40 9.3
68emb|CR385188.1| Gallus gallus finished cDNA, clone ChEST543d4 40 9.3
69gb|AC135158.2| Oryza sativa (japonica cultivar-group) chromosome... 40 9.3
70gb|AC012476.8|AC012476 Homo sapiens chromosome 15 clone RP11-532... 40 9.3
71dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.3
72dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.3
73dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.3
74gb|AC105732.3| Oryza sativa (japonica cultivar-group) chromosome... 40 9.3
75gb|AC022405.5|AC022405 Homo sapiens chromosome 15 clone CTD-2339... 40 9.3
76gb|AC131983.11| Mus musculus chromosome 7, clone RP24-173C11, co... 40 9.3
77dbj|AP008247.2| Oryza sativa (japonica cultivar-group) genomic D... 40 9.3
78dbj|AP006530.3| Oryza sativa (japonica cultivar-group) genomic D... 40 9.3
79gb|AC124290.5| Homo sapiens chromosome 8, clone RP11-89M20, comp... 40 9.3
80gb|AC124073.9| Homo sapiens chromosome 8, clone RP11-593P24, com... 40 9.3
81dbj|AP003734.3| Oryza sativa (japonica cultivar-group) genomic D... 40 9.3
82dbj|AP003315.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.3
83dbj|AP005845.2| Oryza sativa (japonica cultivar-group) genomic D... 40 9.3
84dbj|AB025639.1| Arabidopsis thaliana genomic DNA, chromosome 3, ... 40 9.3
85gb|AC024862.1|AC024862 Caenorhabditis elegans clone Y73B6A, comp... 40 9.3
86dbj|AK069284.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 9.3
87gb|AC006198.1|AC006198 Homo sapiens, clone hRPK.3_A_1, complete ... 40 9.3
88emb|CR354561.11| Zebrafish DNA sequence from clone DKEY-203K18 i... 40 9.3
89dbj|AP006252.1| Homo sapiens genomic DNA, chromosome 8, clone:RP... 40 9.3
90dbj|AP006244.1| Homo sapiens genomic DNA, chromosome 8, clone:RP... 40 9.3
91gb|AC134828.4| Mus musculus BAC clone RP24-472K15 from 6, comple... 40 9.3
92gb|AC132618.3| Mus musculus BAC clone RP23-238K12 from 6, comple... 40 9.3
93emb|AL773603.1|HS7B7 Homo sapiens chromosome 21 from BAC clone 7... 40 9.3
94dbj|AP000082.1| Homo sapiens genomic DNA, chromosome 8p11.2, sen... 40 9.3

>ref|NM_194876.1| Oryza sativa (japonica cultivar-group) putative RNA-binding protein
            (OSJNBa0028C16.8), mRNA
          Length = 1419

 Score =  504 bits (254), Expect = e-139
 Identities = 409/460 (88%), Gaps = 3/460 (0%)
 Strand = Plus / Minus

                                                                        
Query: 219  ccatcccgccggtcaccacgtcgaggagggggtggaggcggcattccaccaggttgttgc 278
            ||||||| ||||||||| || || || ||||| ||||| || |||||||| |||||||||
Sbjct: 1367 ccatccctccggtcaccccgacgcggtgggggcggaggagggattccacctggttgttgc 1308

                                                                        
Query: 279  agaacatagccaaggcggccatcagggagcaccatcggaaccatcctcatcccagccggt 338
            |||||||| || || || || |||||||||||||| || ||||||||||| ||||| |||
Sbjct: 1307 agaacatatcccagacgaccgtcagggagcaccattggtaccatcctcattccagctggt 1248

                                                                        
Query: 339  gctggtcctctaccatatatcataggctggttgaatccagggccaccacca---taggca 395
            ||||||||||||||||||||||||||||||||||||||||| |||||||||   || |||
Sbjct: 1247 gctggtcctctaccatatatcataggctggttgaatccaggaccaccaccaccataagca 1188

                                                                        
Query: 396  ccatatgggtctcccatgtagccaccataaggtggaagaggatagctaggagctcctcca 455
            |||||||| ||||||||||||||||||||||| ||||||||| |  | ||||||||||||
Sbjct: 1187 ccatatggatctcccatgtagccaccataaggaggaagaggaaaatttggagctcctcca 1128

                                                                        
Query: 456  ggcttgaaggagtggtcaggtttcttatcactcaaaggtttggccatggaaacttcgagc 515
            |||||||| ||||| ||||| ||||| || | ||| || ||||||||||| ||||| |||
Sbjct: 1127 ggcttgaacgagtgatcaggcttcttgtctcccaatggcttggccatggatacttccagc 1068

                                                                        
Query: 516  acttgcccatcaatttcatatttttcacttcctttaactgccttcagtgcacttgatctt 575
            |||||||||||||||||||| ||||| ||||||||||||||||||| |||||||||||||
Sbjct: 1067 acttgcccatcaatttcatacttttcgcttcctttaactgccttcaatgcacttgatctt 1008

                                                                        
Query: 576  tcagcaaagtgaacaaacccaaaatccctcttatgcccggccttagcaggcggtaaaaca 635
            |||||||| ||||||||||||||||| ||||||| ||| |||||||||||||||||||| 
Sbjct: 1007 tcagcaaaatgaacaaacccaaaatctctcttattcccagccttagcaggcggtaaaacg 948

                                                    
Query: 636  atttttgtgacctctccatgaacttcaaagagatccttaa 675
            | |||||||||||||||||||| ||||||||  |||||||
Sbjct: 947  acttttgtgacctctccatgaatttcaaagatctccttaa 908



to top

>gb|BT018606.1| Zea mays clone EL01N0450E05.d mRNA sequence
          Length = 1806

 Score =  385 bits (194), Expect = e-103
 Identities = 363/419 (86%), Gaps = 9/419 (2%)
 Strand = Plus / Minus

                                                                        
Query: 246  gggggtggaggcggcattccaccaggttgttgcagaacatagccaaggcggccatcaggg 305
            ||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||| 
Sbjct: 1396 gggggcggaggcggcattccaccaggttgttgcaggacatagccaaggcggccatcagga 1337

                                                                        
Query: 306  agcaccatcggaaccatcctcatcccagccggtgctggtcctctaccatatatcataggc 365
            ||||||||||| ||||||||||| || ||||||||||||||||| ||||||||||| |||
Sbjct: 1336 agcaccatcggcaccatcctcattcctgccggtgctggtcctctgccatatatcattggc 1277

                                                                        
Query: 366  tggttgaatccagg---gccaccaccataggcaccatatgggtctcccatgtag------ 416
            |||||| || ||||   ||| |||||||| ||||||||||| ||||||||||||      
Sbjct: 1276 tggttgtatgcaggaccgccgccaccataagcaccatatggatctcccatgtagccacca 1217

                                                                        
Query: 417  ccaccataaggtggaagaggatagctaggagctcctccaggcttgaaggagtggtcaggt 476
            |||||||| || ||||| |||||  ||||  ||||||||||| ||   || || ||||||
Sbjct: 1216 ccaccatagggaggaaggggataattagggcctcctccaggcctgtgtgaatgatcaggt 1157

                                                                        
Query: 477  ttcttatcactcaaaggtttggccatggaaacttcgagcacttgcccatcaatttcatat 536
            ||||||||   ||| |||||||||||||| ||||| || ||||| ||||| |||||||||
Sbjct: 1156 ttcttatctgccaatggtttggccatggacacttccagtacttgaccatcgatttcatat 1097

                                                                        
Query: 537  ttttcacttcctttaactgccttcagtgcacttgatctttcagcaaagtgaacaaaccca 596
            ||||||||||||||||||||||||| ||||||||||||||| |||||||||||||| |||
Sbjct: 1096 ttttcacttcctttaactgccttcaatgcacttgatctttctgcaaagtgaacaaagcca 1037

                                                                       
Query: 597  aaatccctcttatgcccggccttagcaggcggtaaaacaatttttgtgacctctccatg 655
            || || |||||||| || ||||| ||||| || | ||| ||||||||||||||||||||
Sbjct: 1036 aagtctctcttatgaccagccttggcaggaggcagaacgatttttgtgacctctccatg 978



to top

>gb|AY104865.1| Zea mays PCO099871 mRNA sequence
          Length = 1968

 Score =  385 bits (194), Expect = e-103
 Identities = 363/419 (86%), Gaps = 9/419 (2%)
 Strand = Plus / Minus

                                                                        
Query: 246  gggggtggaggcggcattccaccaggttgttgcagaacatagccaaggcggccatcaggg 305
            ||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||| 
Sbjct: 1558 gggggcggaggcggcattccaccaggttgttgcaggacatagccaaggcggccatcagga 1499

                                                                        
Query: 306  agcaccatcggaaccatcctcatcccagccggtgctggtcctctaccatatatcataggc 365
            ||||||||||| ||||||||||| || ||||||||||||||||| ||||||||||| |||
Sbjct: 1498 agcaccatcggcaccatcctcattcctgccggtgctggtcctctgccatatatcattggc 1439

                                                                        
Query: 366  tggttgaatccagg---gccaccaccataggcaccatatgggtctcccatgtag------ 416
            |||||| || ||||   ||| |||||||| ||||||||||| ||||||||||||      
Sbjct: 1438 tggttgtatgcaggaccgccgccaccataagcaccatatggatctcccatgtagccacca 1379

                                                                        
Query: 417  ccaccataaggtggaagaggatagctaggagctcctccaggcttgaaggagtggtcaggt 476
            |||||||| || ||||| |||||  ||||  ||||||||||| ||   || || ||||||
Sbjct: 1378 ccaccatagggaggaaggggataattagggcctcctccaggcctgtgtgaatgatcaggt 1319

                                                                        
Query: 477  ttcttatcactcaaaggtttggccatggaaacttcgagcacttgcccatcaatttcatat 536
            ||||||||   ||| |||||||||||||| ||||| || ||||| ||||| |||||||||
Sbjct: 1318 ttcttatctgccaatggtttggccatggacacttccagtacttgaccatcgatttcatat 1259

                                                                        
Query: 537  ttttcacttcctttaactgccttcagtgcacttgatctttcagcaaagtgaacaaaccca 596
            ||||||||||||||||||||||||| ||||||||||||||| |||||||||||||| |||
Sbjct: 1258 ttttcacttcctttaactgccttcaatgcacttgatctttctgcaaagtgaacaaagcca 1199

                                                                       
Query: 597  aaatccctcttatgcccggccttagcaggcggtaaaacaatttttgtgacctctccatg 655
            || || |||||||| || ||||| ||||| || | ||| ||||||||||||||||||||
Sbjct: 1198 aagtctctcttatgaccagccttggcaggaggcagaacgatttttgtgacctctccatg 1140



to top

>dbj|AK066347.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013065B13, full
            insert sequence
          Length = 3637

 Score =  357 bits (180), Expect = 3e-95
 Identities = 281/314 (89%), Gaps = 3/314 (0%)
 Strand = Plus / Minus

                                                                        
Query: 365  ctggttgaatccagggccaccacca---taggcaccatatgggtctcccatgtagccacc 421
            ||||||||||||||| |||||||||   || ||||||||||| |||||||||||||||||
Sbjct: 1486 ctggttgaatccaggaccaccaccaccataagcaccatatggatctcccatgtagccacc 1427

                                                                        
Query: 422  ataaggtggaagaggatagctaggagctcctccaggcttgaaggagtggtcaggtttctt 481
            |||||| ||||||||| |  | |||||||||||||||||||| ||||| ||||| |||||
Sbjct: 1426 ataaggaggaagaggaaaatttggagctcctccaggcttgaacgagtgatcaggcttctt 1367

                                                                        
Query: 482  atcactcaaaggtttggccatggaaacttcgagcacttgcccatcaatttcatatttttc 541
             || | ||| || ||||||||||| ||||| ||||||||||||||||||||||| |||||
Sbjct: 1366 gtctcccaatggcttggccatggatacttccagcacttgcccatcaatttcatacttttc 1307

                                                                        
Query: 542  acttcctttaactgccttcagtgcacttgatctttcagcaaagtgaacaaacccaaaatc 601
             ||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||
Sbjct: 1306 gcttcctttaactgccttcaatgcacttgatctttcagcaaaatgaacaaacccaaaatc 1247

                                                                        
Query: 602  cctcttatgcccggccttagcaggcggtaaaacaatttttgtgacctctccatgaacttc 661
             ||||||| ||| |||||||||||||||||||| | |||||||||||||||||||| |||
Sbjct: 1246 tctcttattcccagccttagcaggcggtaaaacgacttttgtgacctctccatgaatttc 1187

                          
Query: 662  aaagagatccttaa 675
            |||||  |||||||
Sbjct: 1186 aaagatctccttaa 1173



 Score =  153 bits (77), Expect = 9e-34
 Identities = 131/149 (87%)
 Strand = Plus / Minus

                                                                        
Query: 219  ccatcccgccggtcaccacgtcgaggagggggtggaggcggcattccaccaggttgttgc 278
            ||||||| ||||||||| || || || ||||| ||||| || |||||||| |||||||||
Sbjct: 3280 ccatccctccggtcaccccgacgcggtgggggcggaggagggattccacctggttgttgc 3221

                                                                        
Query: 279  agaacatagccaaggcggccatcagggagcaccatcggaaccatcctcatcccagccggt 338
            |||||||| || || || || |||||||||||||| || ||||||||||| ||||| |||
Sbjct: 3220 agaacatatcccagacgaccgtcagggagcaccattggtaccatcctcattccagctggt 3161

                                         
Query: 339  gctggtcctctaccatatatcataggctg 367
            |||||||||||||||||||||||||||||
Sbjct: 3160 gctggtcctctaccatatatcataggctg 3132



to top

>gb|AC098565.3| Oryza sativa chromosome 10 clone OSJNBa0028C16, complete sequence
          Length = 166757

 Score =  210 bits (106), Expect = 4e-51
 Identities = 142/154 (92%)
 Strand = Plus / Plus

                                                                         
Query: 522   ccatcaatttcatatttttcacttcctttaactgccttcagtgcacttgatctttcagca 581
             |||||||||||||| ||||| ||||||||||||||||||| |||||||||||||||||||
Sbjct: 65093 ccatcaatttcatacttttcgcttcctttaactgccttcaatgcacttgatctttcagca 65152

                                                                         
Query: 582   aagtgaacaaacccaaaatccctcttatgcccggccttagcaggcggtaaaacaattttt 641
             || ||||||||||||||||| ||||||| ||| |||||||||||||||||||| | ||||
Sbjct: 65153 aaatgaacaaacccaaaatctctcttattcccagccttagcaggcggtaaaacgactttt 65212

                                               
Query: 642   gtgacctctccatgaacttcaaagagatccttaa 675
             |||||||||||||||| ||||||||  |||||||
Sbjct: 65213 gtgacctctccatgaatttcaaagatctccttaa 65246



 Score =  151 bits (76), Expect = 4e-33
 Identities = 141/162 (87%), Gaps = 3/162 (1%)
 Strand = Plus / Plus

                                                                         
Query: 365   ctggttgaatccagggccaccacca---taggcaccatatgggtctcccatgtagccacc 421
             ||||||||||||||| |||||||||   || ||||||||||| |||||||||||||||||
Sbjct: 64725 ctggttgaatccaggaccaccaccaccataagcaccatatggatctcccatgtagccacc 64784

                                                                         
Query: 422   ataaggtggaagaggatagctaggagctcctccaggcttgaaggagtggtcaggtttctt 481
             |||||| ||||||||| |  | |||||||||||||||||||| ||||| ||||| |||||
Sbjct: 64785 ataaggaggaagaggaaaatttggagctcctccaggcttgaacgagtgatcaggcttctt 64844

                                                       
Query: 482   atcactcaaaggtttggccatggaaacttcgagcacttgccc 523
              || | ||| || ||||||||||| ||||| |||||||||||
Sbjct: 64845 gtctcccaatggcttggccatggatacttccagcacttgccc 64886



 Score =  107 bits (54), Expect = 5e-20
 Identities = 81/90 (90%)
 Strand = Plus / Plus

                                                                         
Query: 278   cagaacatagccaaggcggccatcagggagcaccatcggaaccatcctcatcccagccgg 337
             ||||||||| || || || || |||||||||||||| || ||||||||||| ||||| ||
Sbjct: 62990 cagaacatatcccagacgaccgtcagggagcaccattggtaccatcctcattccagctgg 63049

                                           
Query: 338   tgctggtcctctaccatatatcataggctg 367
             ||||||||||||||||||||||||||||||
Sbjct: 63050 tgctggtcctctaccatatatcataggctg 63079



 Score =  107 bits (54), Expect = 5e-20
 Identities = 81/90 (90%)
 Strand = Plus / Plus

                                                                         
Query: 278   cagaacatagccaaggcggccatcagggagcaccatcggaaccatcctcatcccagccgg 337
             ||||||||| || || || || |||||||||||||| || ||||||||||| ||||| ||
Sbjct: 51927 cagaacatatcccagacgaccgtcagggagcaccattggtaccatcctcattccagctgg 51986

                                           
Query: 338   tgctggtcctctaccatatatcataggctg 367
             ||||||||||||||||||||||||||||||
Sbjct: 51987 tgctggtcctctaccatatatcataggctg 52016



 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 70/78 (89%)
 Strand = Plus / Plus

                                                                         
Query: 598   aatccctcttatgcccggccttagcaggcggtaaaacaatttttgtgacctctccatgaa 657
             |||| ||||||| ||| |||||||||||||||||||| | ||||||||||||||||||||
Sbjct: 52717 aatctctcttattccctgccttagcaggcggtaaaacgacttttgtgacctctccatgaa 52776

                               
Query: 658   cttcaaagagatccttaa 675
              ||||||||  |||||||
Sbjct: 52777 tttcaaagatctccttaa 52794



 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 76/90 (84%), Gaps = 3/90 (3%)
 Strand = Plus / Plus

                                                                         
Query: 278   cagaacatagccaaggcggccatcagggagcaccatcggaaccatcctcatcccagccgg 337
             ||||||||| || || || || |||||||||||||| || ||||||   || | ||| ||
Sbjct: 20285 cagaacatatcccagacgaccgtcagggagcaccattggtaccatc---attcgagctgg 20341

                                           
Query: 338   tgctggtcctctaccatatatcataggctg 367
             |||||||||||||||||||||||| |||||
Sbjct: 20342 tgctggtcctctaccatatatcatgggctg 20371



 Score = 48.1 bits (24), Expect = 0.038
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                                 
Query: 536   tttttcacttcctttaactgccttcagtgcacttga 571
             |||||| ||||||| ||||||||||| |||||||||
Sbjct: 52677 tttttcgcttccttaaactgccttcaatgcacttga 52712



to top

>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
               sequence
          Length = 22685906

 Score =  210 bits (106), Expect = 4e-51
 Identities = 142/154 (92%)
 Strand = Plus / Plus

                                                                           
Query: 522     ccatcaatttcatatttttcacttcctttaactgccttcagtgcacttgatctttcagca 581
               |||||||||||||| ||||| ||||||||||||||||||| |||||||||||||||||||
Sbjct: 3095461 ccatcaatttcatacttttcgcttcctttaactgccttcaatgcacttgatctttcagca 3095520

                                                                           
Query: 582     aagtgaacaaacccaaaatccctcttatgcccggccttagcaggcggtaaaacaattttt 641
               || ||||||||||||||||| ||||||| ||| |||||||||||||||||||| | ||||
Sbjct: 3095521 aaatgaacaaacccaaaatctctcttattcccagccttagcaggcggtaaaacgactttt 3095580

                                                 
Query: 642     gtgacctctccatgaacttcaaagagatccttaa 675
               |||||||||||||||| ||||||||  |||||||
Sbjct: 3095581 gtgacctctccatgaatttcaaagatctccttaa 3095614



 Score =  151 bits (76), Expect = 4e-33
 Identities = 141/162 (87%), Gaps = 3/162 (1%)
 Strand = Plus / Plus

                                                                           
Query: 365     ctggttgaatccagggccaccacca---taggcaccatatgggtctcccatgtagccacc 421
               ||||||||||||||| |||||||||   || ||||||||||| |||||||||||||||||
Sbjct: 3095093 ctggttgaatccaggaccaccaccaccataagcaccatatggatctcccatgtagccacc 3095152

                                                                           
Query: 422     ataaggtggaagaggatagctaggagctcctccaggcttgaaggagtggtcaggtttctt 481
               |||||| ||||||||| |  | |||||||||||||||||||| ||||| ||||| |||||
Sbjct: 3095153 ataaggaggaagaggaaaatttggagctcctccaggcttgaacgagtgatcaggcttctt 3095212

                                                         
Query: 482     atcactcaaaggtttggccatggaaacttcgagcacttgccc 523
                || | ||| || ||||||||||| ||||| |||||||||||
Sbjct: 3095213 gtctcccaatggcttggccatggatacttccagcacttgccc 3095254



 Score =  107 bits (54), Expect = 5e-20
 Identities = 81/90 (90%)
 Strand = Plus / Plus

                                                                           
Query: 278     cagaacatagccaaggcggccatcagggagcaccatcggaaccatcctcatcccagccgg 337
               ||||||||| || || || || |||||||||||||| || ||||||||||| ||||| ||
Sbjct: 3093358 cagaacatatcccagacgaccgtcagggagcaccattggtaccatcctcattccagctgg 3093417

                                             
Query: 338     tgctggtcctctaccatatatcataggctg 367
               ||||||||||||||||||||||||||||||
Sbjct: 3093418 tgctggtcctctaccatatatcataggctg 3093447



 Score =  107 bits (54), Expect = 5e-20
 Identities = 81/90 (90%)
 Strand = Plus / Plus

                                                                           
Query: 278     cagaacatagccaaggcggccatcagggagcaccatcggaaccatcctcatcccagccgg 337
               ||||||||| || || || || |||||||||||||| || ||||||||||| ||||| ||
Sbjct: 3082295 cagaacatatcccagacgaccgtcagggagcaccattggtaccatcctcattccagctgg 3082354

                                             
Query: 338     tgctggtcctctaccatatatcataggctg 367
               ||||||||||||||||||||||||||||||
Sbjct: 3082355 tgctggtcctctaccatatatcataggctg 3082384



 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 70/78 (89%)
 Strand = Plus / Plus

                                                                           
Query: 598     aatccctcttatgcccggccttagcaggcggtaaaacaatttttgtgacctctccatgaa 657
               |||| ||||||| ||| |||||||||||||||||||| | ||||||||||||||||||||
Sbjct: 3083085 aatctctcttattccctgccttagcaggcggtaaaacgacttttgtgacctctccatgaa 3083144

                                 
Query: 658     cttcaaagagatccttaa 675
                ||||||||  |||||||
Sbjct: 3083145 tttcaaagatctccttaa 3083162



 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 76/90 (84%), Gaps = 3/90 (3%)
 Strand = Plus / Plus

                                                                           
Query: 278     cagaacatagccaaggcggccatcagggagcaccatcggaaccatcctcatcccagccgg 337
               ||||||||| || || || || |||||||||||||| || ||||||   || | ||| ||
Sbjct: 3050653 cagaacatatcccagacgaccgtcagggagcaccattggtaccatc---attcgagctgg 3050709

                                             
Query: 338     tgctggtcctctaccatatatcataggctg 367
               |||||||||||||||||||||||| |||||
Sbjct: 3050710 tgctggtcctctaccatatatcatgggctg 3050739



 Score = 48.1 bits (24), Expect = 0.038
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                                   
Query: 536     tttttcacttcctttaactgccttcagtgcacttga 571
               |||||| ||||||| ||||||||||| |||||||||
Sbjct: 3083045 tttttcgcttccttaaactgccttcaatgcacttga 3083080



to top

>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score =  210 bits (106), Expect = 4e-51
 Identities = 142/154 (92%)
 Strand = Plus / Plus

                                                                           
Query: 522     ccatcaatttcatatttttcacttcctttaactgccttcagtgcacttgatctttcagca 581
               |||||||||||||| ||||| ||||||||||||||||||| |||||||||||||||||||
Sbjct: 3095382 ccatcaatttcatacttttcgcttcctttaactgccttcaatgcacttgatctttcagca 3095441

                                                                           
Query: 582     aagtgaacaaacccaaaatccctcttatgcccggccttagcaggcggtaaaacaattttt 641
               || ||||||||||||||||| ||||||| ||| |||||||||||||||||||| | ||||
Sbjct: 3095442 aaatgaacaaacccaaaatctctcttattcccagccttagcaggcggtaaaacgactttt 3095501

                                                 
Query: 642     gtgacctctccatgaacttcaaagagatccttaa 675
               |||||||||||||||| ||||||||  |||||||
Sbjct: 3095502 gtgacctctccatgaatttcaaagatctccttaa 3095535



 Score =  151 bits (76), Expect = 4e-33
 Identities = 141/162 (87%), Gaps = 3/162 (1%)
 Strand = Plus / Plus

                                                                           
Query: 365     ctggttgaatccagggccaccacc---ataggcaccatatgggtctcccatgtagccacc 421
               ||||||||||||||| ||||||||   ||| ||||||||||| |||||||||||||||||
Sbjct: 3095014 ctggttgaatccaggaccaccaccaccataagcaccatatggatctcccatgtagccacc 3095073

                                                                           
Query: 422     ataaggtggaagaggatagctaggagctcctccaggcttgaaggagtggtcaggtttctt 481
               |||||| ||||||||| |  | |||||||||||||||||||| ||||| ||||| |||||
Sbjct: 3095074 ataaggaggaagaggaaaatttggagctcctccaggcttgaacgagtgatcaggcttctt 3095133

                                                         
Query: 482     atcactcaaaggtttggccatggaaacttcgagcacttgccc 523
                || | ||| || ||||||||||| ||||| |||||||||||
Sbjct: 3095134 gtctcccaatggcttggccatggatacttccagcacttgccc 3095175



 Score =  107 bits (54), Expect = 5e-20
 Identities = 81/90 (90%)
 Strand = Plus / Plus

                                                                           
Query: 278     cagaacatagccaaggcggccatcagggagcaccatcggaaccatcctcatcccagccgg 337
               ||||||||| || || || || |||||||||||||| || ||||||||||| ||||| ||
Sbjct: 3093279 cagaacatatcccagacgaccgtcagggagcaccattggtaccatcctcattccagctgg 3093338

                                             
Query: 338     tgctggtcctctaccatatatcataggctg 367
               ||||||||||||||||||||||||||||||
Sbjct: 3093339 tgctggtcctctaccatatatcataggctg 3093368



 Score =  107 bits (54), Expect = 5e-20
 Identities = 81/90 (90%)
 Strand = Plus / Plus

                                                                           
Query: 278     cagaacatagccaaggcggccatcagggagcaccatcggaaccatcctcatcccagccgg 337
               ||||||||| || || || || |||||||||||||| || ||||||||||| ||||| ||
Sbjct: 3082216 cagaacatatcccagacgaccgtcagggagcaccattggtaccatcctcattccagctgg 3082275

                                             
Query: 338     tgctggtcctctaccatatatcataggctg 367
               ||||||||||||||||||||||||||||||
Sbjct: 3082276 tgctggtcctctaccatatatcataggctg 3082305



 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 70/78 (89%)
 Strand = Plus / Plus

                                                                           
Query: 598     aatccctcttatgcccggccttagcaggcggtaaaacaatttttgtgacctctccatgaa 657
               |||| ||||||| ||| |||||||||||||||||||| | ||||||||||||||||||||
Sbjct: 3083006 aatctctcttattccctgccttagcaggcggtaaaacgacttttgtgacctctccatgaa 3083065

                                 
Query: 658     cttcaaagagatccttaa 675
                ||||||||  |||||||
Sbjct: 3083066 tttcaaagatctccttaa 3083083



 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 76/90 (84%), Gaps = 3/90 (3%)
 Strand = Plus / Plus

                                                                           
Query: 278     cagaacatagccaaggcggccatcagggagcaccatcggaaccatcctcatcccagccgg 337
               ||||||||| || || || || |||||||||||||| || ||||||   || | ||| ||
Sbjct: 3050574 cagaacatatcccagacgaccgtcagggagcaccattggtaccatc---attcgagctgg 3050630

                                             
Query: 338     tgctggtcctctaccatatatcataggctg 367
               |||||||||||||||||||||||| |||||
Sbjct: 3050631 tgctggtcctctaccatatatcatgggctg 3050660



 Score = 48.1 bits (24), Expect = 0.038
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                                   
Query: 536     tttttcacttcctttaactgccttcagtgcacttga 571
               |||||| ||||||| ||||||||||| |||||||||
Sbjct: 3082966 tttttcgcttccttaaactgccttcaatgcacttga 3083001



to top

>gb|AC146948.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone P0782F03 map
              near S2137, complete sequence
          Length = 197516

 Score =  178 bits (90), Expect = 2e-41
 Identities = 117/126 (92%)
 Strand = Plus / Plus

                                                                          
Query: 530    ttcatatttttcacttcctttaactgccttcagtgcacttgatctttcagcaaagtgaac 589
              |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 101931 ttcatatttttcgcttcctttaactgccttcagtgcacttgatctttcagcaaagtgaac 101990

                                                                          
Query: 590    aaacccaaaatccctcttatgcccggccttagcaggcggtaaaacaatttttgtgacctc 649
              ||| |||||||| |||||||||||  |||||||||| || ||||| | ||||||||||||
Sbjct: 101991 aaaaccaaaatctctcttatgcccatccttagcaggtggcaaaacgacttttgtgacctc 102050

                    
Query: 650    tccatg 655
              ||||||
Sbjct: 102051 tccatg 102056



 Score =  159 bits (80), Expect = 1e-35
 Identities = 142/162 (87%), Gaps = 3/162 (1%)
 Strand = Plus / Plus

                                                                          
Query: 365    ctggttgaatccagggccaccacca---taggcaccatatgggtctcccatgtagccacc 421
              ||||||||||||||| |||||||||   || ||||||||||| |||||||||||||||||
Sbjct: 101489 ctggttgaatccaggaccaccaccaccataagcaccatatggatctcccatgtagccacc 101548

                                                                          
Query: 422    ataaggtggaagaggatagctaggagctcctccaggcttgaaggagtggtcaggtttctt 481
              |||||| ||||| ||| |  | ||||||||| | |||||||| ||||| |||||||||||
Sbjct: 101549 ataaggaggaagtggaaaatttggagctcctgctggcttgaacgagtgatcaggtttctt 101608

                                                        
Query: 482    atcactcaaaggtttggccatggaaacttcgagcacttgccc 523
               |||| |||||||||||||||||| ||||| |||||||||||
Sbjct: 101609 gtcacccaaaggtttggccatggatacttccagcacttgccc 101650



 Score =  107 bits (54), Expect = 5e-20
 Identities = 81/90 (90%)
 Strand = Plus / Plus

                                                                          
Query: 278    cagaacatagccaaggcggccatcagggagcaccatcggaaccatcctcatcccagccgg 337
              ||||||||| ||||| || || |||||||||||||| || ||||||||||| ||||| ||
Sbjct: 101321 cagaacatatccaagacgaccgtcagggagcaccattgggaccatcctcattccagctgg 101380

                                            
Query: 338    tgctggtcctctaccatatatcataggctg 367
              |||||||||||||||||| |||||||||||
Sbjct: 101381 tgctggtcctctaccatagatcataggctg 101410



 Score = 40.1 bits (20), Expect = 9.3
 Identities = 50/60 (83%)
 Strand = Plus / Plus

                                                                          
Query: 219    ccatcccgccggtcaccacgtcgaggagggggtggaggcggcattccaccaggttgttgc 278
              ||||||| ||||||||| |||||    || |||||||| || ||||||||||| ||||||
Sbjct: 101181 ccatccctccggtcaccgcgtcgcattggtggtggagggggaattccaccaggctgttgc 101240



to top

>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score =  178 bits (90), Expect = 2e-41
 Identities = 117/126 (92%)
 Strand = Plus / Plus

                                                                           
Query: 530     ttcatatttttcacttcctttaactgccttcagtgcacttgatctttcagcaaagtgaac 589
               |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8021203 ttcatatttttcgcttcctttaactgccttcagtgcacttgatctttcagcaaagtgaac 8021262

                                                                           
Query: 590     aaacccaaaatccctcttatgcccggccttagcaggcggtaaaacaatttttgtgacctc 649
               ||| |||||||| |||||||||||  |||||||||| || ||||| | ||||||||||||
Sbjct: 8021263 aaaaccaaaatctctcttatgcccatccttagcaggtggcaaaacgacttttgtgacctc 8021322

                     
Query: 650     tccatg 655
               ||||||
Sbjct: 8021323 tccatg 8021328



 Score =  159 bits (80), Expect = 1e-35
 Identities = 142/162 (87%), Gaps = 3/162 (1%)
 Strand = Plus / Plus

                                                                           
Query: 365     ctggttgaatccagggccaccacca---taggcaccatatgggtctcccatgtagccacc 421
               ||||||||||||||| |||||||||   || ||||||||||| |||||||||||||||||
Sbjct: 8020761 ctggttgaatccaggaccaccaccaccataagcaccatatggatctcccatgtagccacc 8020820

                                                                           
Query: 422     ataaggtggaagaggatagctaggagctcctccaggcttgaaggagtggtcaggtttctt 481
               |||||| ||||| ||| |  | ||||||||| | |||||||| ||||| |||||||||||
Sbjct: 8020821 ataaggaggaagtggaaaatttggagctcctgctggcttgaacgagtgatcaggtttctt 8020880

                                                         
Query: 482     atcactcaaaggtttggccatggaaacttcgagcacttgccc 523
                |||| |||||||||||||||||| ||||| |||||||||||
Sbjct: 8020881 gtcacccaaaggtttggccatggatacttccagcacttgccc 8020922



 Score =  107 bits (54), Expect = 5e-20
 Identities = 81/90 (90%)
 Strand = Plus / Plus

                                                                           
Query: 278     cagaacatagccaaggcggccatcagggagcaccatcggaaccatcctcatcccagccgg 337
               ||||||||| ||||| || || |||||||||||||| || ||||||||||| ||||| ||
Sbjct: 8020593 cagaacatatccaagacgaccgtcagggagcaccattgggaccatcctcattccagctgg 8020652

                                             
Query: 338     tgctggtcctctaccatatatcataggctg 367
               |||||||||||||||||| |||||||||||
Sbjct: 8020653 tgctggtcctctaccatagatcataggctg 8020682



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 213      ccaccgccatcccgccggtcaccac 237
                ||||||||||| |||||||||||||
Sbjct: 14162088 ccaccgccatctcgccggtcaccac 14162064



 Score = 40.1 bits (20), Expect = 9.3
 Identities = 50/60 (83%)
 Strand = Plus / Plus

                                                                           
Query: 219     ccatcccgccggtcaccacgtcgaggagggggtggaggcggcattccaccaggttgttgc 278
               ||||||| ||||||||| |||||    || |||||||| || ||||||||||| ||||||
Sbjct: 8020453 ccatccctccggtcaccgcgtcgcattggtggtggagggggaattccaccaggctgttgc 8020512



to top

>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score =  178 bits (90), Expect = 2e-41
 Identities = 117/126 (92%)
 Strand = Plus / Plus

                                                                           
Query: 530     ttcatatttttcacttcctttaactgccttcagtgcacttgatctttcagcaaagtgaac 589
               |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8091142 ttcatatttttcgcttcctttaactgccttcagtgcacttgatctttcagcaaagtgaac 8091201

                                                                           
Query: 590     aaacccaaaatccctcttatgcccggccttagcaggcggtaaaacaatttttgtgacctc 649
               ||| |||||||| |||||||||||  |||||||||| || ||||| | ||||||||||||
Sbjct: 8091202 aaaaccaaaatctctcttatgcccatccttagcaggtggcaaaacgacttttgtgacctc 8091261

                     
Query: 650     tccatg 655
               ||||||
Sbjct: 8091262 tccatg 8091267



 Score =  159 bits (80), Expect = 1e-35
 Identities = 142/162 (87%), Gaps = 3/162 (1%)
 Strand = Plus / Plus

                                                                           
Query: 365     ctggttgaatccagggccaccacca---taggcaccatatgggtctcccatgtagccacc 421
               ||||||||||||||| |||||||||   || ||||||||||| |||||||||||||||||
Sbjct: 8090700 ctggttgaatccaggaccaccaccaccataagcaccatatggatctcccatgtagccacc 8090759

                                                                           
Query: 422     ataaggtggaagaggatagctaggagctcctccaggcttgaaggagtggtcaggtttctt 481
               |||||| ||||| ||| |  | ||||||||| | |||||||| ||||| |||||||||||
Sbjct: 8090760 ataaggaggaagtggaaaatttggagctcctgctggcttgaacgagtgatcaggtttctt 8090819

                                                         
Query: 482     atcactcaaaggtttggccatggaaacttcgagcacttgccc 523
                |||| |||||||||||||||||| ||||| |||||||||||
Sbjct: 8090820 gtcacccaaaggtttggccatggatacttccagcacttgccc 8090861



 Score =  107 bits (54), Expect = 5e-20
 Identities = 81/90 (90%)
 Strand = Plus / Plus

                                                                           
Query: 278     cagaacatagccaaggcggccatcagggagcaccatcggaaccatcctcatcccagccgg 337
               ||||||||| ||||| || || |||||||||||||| || ||||||||||| ||||| ||
Sbjct: 8090532 cagaacatatccaagacgaccgtcagggagcaccattgggaccatcctcattccagctgg 8090591

                                             
Query: 338     tgctggtcctctaccatatatcataggctg 367
               |||||||||||||||||| |||||||||||
Sbjct: 8090592 tgctggtcctctaccatagatcataggctg 8090621



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 213      ccaccgccatcccgccggtcaccac 237
                ||||||||||| |||||||||||||
Sbjct: 14244090 ccaccgccatctcgccggtcaccac 14244066



 Score = 40.1 bits (20), Expect = 9.3
 Identities = 50/60 (83%)
 Strand = Plus / Plus

                                                                           
Query: 219     ccatcccgccggtcaccacgtcgaggagggggtggaggcggcattccaccaggttgttgc 278
               ||||||| ||||||||| |||||    || |||||||| || ||||||||||| ||||||
Sbjct: 8090392 ccatccctccggtcaccgcgtcgcattggtggtggagggggaattccaccaggctgttgc 8090451



to top

>ref|NM_116309.2| Arabidopsis thaliana RNA binding / nucleic acid binding AT4G00830
            transcript variant AT4G00830.1 mRNA, complete cds
          Length = 2267

 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 43/47 (91%)
 Strand = Plus / Minus

                                                           
Query: 555  gccttcagtgcacttgatctttcagcaaagtgaacaaacccaaaatc 601
            ||||||| |||||| |||||||||||| |||| ||||||||||||||
Sbjct: 1186 gccttcaatgcactagatctttcagcatagtggacaaacccaaaatc 1140



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 49/57 (85%)
 Strand = Plus / Minus

                                                                     
Query: 266  accaggttgttgcagaacatagccaaggcggccatcagggagcaccatcggaaccat 322
            |||||| |||||||||||||||||||  |||||||| || || | ||| ||||||||
Sbjct: 1499 accaggctgttgcagaacatagccaactcggccatcgggaagaagcattggaaccat 1443



to top

>ref|NM_001036489.1| Arabidopsis thaliana RNA binding / nucleic acid binding AT4G00830
            transcript variant AT4G00830.2 mRNA, complete cds
          Length = 2455

 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 43/47 (91%)
 Strand = Plus / Minus

                                                           
Query: 555  gccttcagtgcacttgatctttcagcaaagtgaacaaacccaaaatc 601
            ||||||| |||||| |||||||||||| |||| ||||||||||||||
Sbjct: 1374 gccttcaatgcactagatctttcagcatagtggacaaacccaaaatc 1328



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 49/57 (85%)
 Strand = Plus / Minus

                                                                     
Query: 266  accaggttgttgcagaacatagccaaggcggccatcagggagcaccatcggaaccat 322
            |||||| |||||||||||||||||||  |||||||| || || | ||| ||||||||
Sbjct: 1687 accaggctgttgcagaacatagccaactcggccatcgggaagaagcattggaaccat 1631



to top

>emb|AL161472.2|ATCHRIV2 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 2
          Length = 197975

 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 43/47 (91%)
 Strand = Plus / Minus

                                                             
Query: 555    gccttcagtgcacttgatctttcagcaaagtgaacaaacccaaaatc 601
              ||||||| |||||| |||||||||||| |||| ||||||||||||||
Sbjct: 160873 gccttcaatgcactagatctttcagcatagtggacaaacccaaaatc 160827



to top

>gb|AY113171.1| Arabidopsis thaliana AT4g00830/A_TM018A10_14 mRNA, complete cds
          Length = 1488

 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 43/47 (91%)
 Strand = Plus / Minus

                                                           
Query: 555  gccttcagtgcacttgatctttcagcaaagtgaacaaacccaaaatc 601
            ||||||| |||||| |||||||||||| |||| ||||||||||||||
Sbjct: 1040 gccttcaatgcactagatctttcagcatagtggacaaacccaaaatc 994



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 49/57 (85%)
 Strand = Plus / Minus

                                                                     
Query: 266  accaggttgttgcagaacatagccaaggcggccatcagggagcaccatcggaaccat 322
            |||||| |||||||||||||||||||  |||||||| || || | ||| ||||||||
Sbjct: 1353 accaggctgttgcagaacatagccaactcggccatcgggaagaagcattggaaccat 1297



to top

>gb|AF367357.1| Arabidopsis thaliana AT4g00830/A_TM018A10_14 mRNA, complete cds
          Length = 1838

 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 43/47 (91%)
 Strand = Plus / Minus

                                                           
Query: 555  gccttcagtgcacttgatctttcagcaaagtgaacaaacccaaaatc 601
            ||||||| |||||| |||||||||||| |||| ||||||||||||||
Sbjct: 1185 gccttcaatgcactagatctttcagcatagtggacaaacccaaaatc 1139



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 49/57 (85%)
 Strand = Plus / Minus

                                                                     
Query: 266  accaggttgttgcagaacatagccaaggcggccatcagggagcaccatcggaaccat 322
            |||||| |||||||||||||||||||  |||||||| || || | ||| ||||||||
Sbjct: 1498 accaggctgttgcagaacatagccaactcggccatcgggaagaagcattggaaccat 1442



to top

>gb|AF013294.1|TM018A10 Arabidopsis thaliana BAC TM018A10
          Length = 106184

 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 43/47 (91%)
 Strand = Plus / Plus

                                                            
Query: 555   gccttcagtgcacttgatctttcagcaaagtgaacaaacccaaaatc 601
             ||||||| |||||| |||||||||||| |||| ||||||||||||||
Sbjct: 73692 gccttcaatgcactagatctttcagcatagtggacaaacccaaaatc 73738



to top

>dbj|AP004939.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT17M09, TM0105,
             complete sequence
          Length = 127990

 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 69/82 (84%)
 Strand = Plus / Minus

                                                                         
Query: 522   ccatcaatttcatatttttcacttcctttaactgccttcagtgcacttgatctttcagca 581
             ||||||||||||||||| ||  || |||| ||||| |||| ||||||||| || ||||||
Sbjct: 74401 ccatcaatttcatatttctctgtttcttttactgctttcaatgcacttgacctctcagca 74342

                                   
Query: 582   aagtgaacaaacccaaaatccc 603
             || ||||  || ||||||||||
Sbjct: 74341 aaatgaatgaaaccaaaatccc 74320



to top

>gb|AC139854.21| Medicago truncatula clone mth2-16e16, complete sequence
          Length = 117864

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 36/39 (92%)
 Strand = Plus / Plus

                                                    
Query: 554   tgccttcagtgcacttgatctttcagcaaagtgaacaaa 592
             |||||||| ||||||||| || |||||||||||||||||
Sbjct: 72646 tgccttcattgcacttgacctatcagcaaagtgaacaaa 72684



to top

>emb|BX827625.1|CNS0A4H2 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS87ZA01 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 654

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 49/57 (85%)
 Strand = Plus / Minus

                                                                    
Query: 266 accaggttgttgcagaacatagccaaggcggccatcagggagcaccatcggaaccat 322
           |||||| |||||||||||||||||||  |||||||| || || | ||| ||||||||
Sbjct: 251 accaggctgttgcagaacatagccaactcggccatcgggaagaagcattggaaccat 195



to top

>emb|BX826993.1|CNS0A37N Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB84ZD12 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 504

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 49/57 (85%)
 Strand = Plus / Minus

                                                                    
Query: 266 accaggttgttgcagaacatagccaaggcggccatcagggagcaccatcggaaccat 322
           |||||| |||||||||||||||||||  |||||||| || || | ||| ||||||||
Sbjct: 164 accaggctgttgcagaacatagccaactcggccatccggaagaagcattggaaccat 108



to top

>gb|BT013793.1| Lycopersicon esculentum clone 132713F, mRNA sequence
          Length = 1837

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 342  ggtcctctaccatatatcatagg 364
            |||||||||||||||||||||||
Sbjct: 1401 ggtcctctaccatatatcatagg 1379



to top

>ref|XM_542593.2| PREDICTED: Canis familiaris similar to Diaphanous protein homolog 3
            (Diaphanous-related formin 3) (DRF3), transcript variant
            1 (LOC485474), mRNA
          Length = 2916

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 241  gaggagggggtggaggcggcat 262
            ||||||||||||||||||||||
Sbjct: 1354 gaggagggggtggaggcggcat 1333



to top

>ref|XM_852251.1| PREDICTED: Canis familiaris similar to Diaphanous protein homolog 3
            (Diaphanous-related formin 3) (DRF3), transcript variant
            4 (LOC485474), mRNA
          Length = 2946

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 241  gaggagggggtggaggcggcat 262
            ||||||||||||||||||||||
Sbjct: 1384 gaggagggggtggaggcggcat 1363



to top

>gb|AF495972.1| Drosophila simulans strain New Caledonia CG3588 (CG3588) gene,
            partial cds
          Length = 1708

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 364  gctggttgaatccagggccacc 385
            ||||||||||||||||||||||
Sbjct: 1073 gctggttgaatccagggccacc 1052



to top

>emb|AL935149.16| Mouse DNA sequence from clone RP23-70N3 on chromosome 2, complete
             sequence
          Length = 122010

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 587   aacaaacccaaaatccctctta 608
             ||||||||||||||||||||||
Sbjct: 69878 aacaaacccaaaatccctctta 69899



to top

>dbj|AK138958.1| Mus musculus adult male aorta and vein cDNA, RIKEN full-length
            enriched library, clone:A530029L24 product:hypothetical
            protein, full insert sequence
          Length = 2795

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 587  aacaaacccaaaatccctctta 608
            ||||||||||||||||||||||
Sbjct: 1618 aacaaacccaaaatccctctta 1597



to top

>dbj|AK014679.1| Mus musculus 0 day neonate head cDNA, RIKEN full-length enriched
            library, clone:4833411I10 product:unclassifiable, full
            insert sequence
          Length = 1558

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 587  aacaaacccaaaatccctctta 608
            ||||||||||||||||||||||
Sbjct: 1036 aacaaacccaaaatccctctta 1015



to top

>ref|XM_481319.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2421

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 240 cgaggagggggtggaggcggc 260
           |||||||||||||||||||||
Sbjct: 450 cgaggagggggtggaggcggc 430



to top

>gb|AC145808.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0057F07 map near 50283S, complete sequence
          Length = 139827

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 213   ccaccgccatcccgccggtcaccac 237
             ||||||||||| |||||||||||||
Sbjct: 84206 ccaccgccatctcgccggtcaccac 84230



to top

>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome
          Length = 4403837

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                              
Query: 211   cgccaccgccatcccgccggtcaccacgtcgag 243
             ||||||||||| | ||||||||| |||||||||
Sbjct: 93115 cgccaccgccaccacgccggtcaacacgtcgag 93083



to top

>gb|AC161187.5| Mus musculus chromosome 5, clone RP23-297H22, complete sequence
          Length = 171367

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 24     gatacacaagttattgaaaaggaca 48
              |||||| ||||||||||||||||||
Sbjct: 127536 gatacagaagttattgaaaaggaca 127560



to top

>gb|AC138288.13| Mus musculus chromosome 9, clone RP23-464K22, complete sequence
          Length = 235544

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 319   ccatcctcatcccagccggtgctgg 343
             ||||||||||||||||||| |||||
Sbjct: 37207 ccatcctcatcccagccggggctgg 37231



to top

>gb|AC110251.11| Mus musculus chromosome 5, clone RP23-263O8, complete sequence
          Length = 197946

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 24    gatacacaagttattgaaaaggaca 48
             |||||| ||||||||||||||||||
Sbjct: 69817 gatacagaagttattgaaaaggaca 69841



to top

>emb|AL645665.11| Human DNA sequence from clone RP11-963P9 on chromosome X, complete
             sequence
          Length = 77344

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 138   acaaatccatcacctacaaaa 158
             |||||||||||||||||||||
Sbjct: 12997 acaaatccatcacctacaaaa 13017



to top

>emb|AL451107.6| Human DNA sequence from clone RP11-14C22 on chromosome 10 Contains the
              gene for a novel protein similar to lysozyme C-1 (1
              4-beta-N-acylmuramidase C EC 3.2.1.17) (MGC33408), three
              novel genes and a supervillin pseudogene (SVIL), complete
              sequence
          Length = 172779

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 50     cacaacagaacaagtctcagg 70
              |||||||||||||||||||||
Sbjct: 109045 cacaacagaacaagtctcagg 109025



to top

>emb|BX842572.1| Mycobacterium tuberculosis H37Rv complete genome; segment 1/13
          Length = 341957

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                              
Query: 211   cgccaccgccatcccgccggtcaccacgtcgag 243
             ||||||||||| | ||||||||| |||||||||
Sbjct: 93125 cgccaccgccaccacgccggtcaacacgtcgag 93093



to top

>emb|BX248334.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment
             1/14
          Length = 343050

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                              
Query: 211   cgccaccgccatcccgccggtcaccacgtcgag 243
             ||||||||||| | ||||||||| |||||||||
Sbjct: 93160 cgccaccgccaccacgccggtcaacacgtcgag 93128



to top

>emb|BX897692.16| Zebrafish DNA sequence from clone DKEY-34F9 in linkage group 9,
             complete sequence
          Length = 185941

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 534   tatttttcacttcctttaact 554
             |||||||||||||||||||||
Sbjct: 80466 tatttttcacttcctttaact 80446



to top

>gb|AC160983.2| Mus musculus BAC clone RP23-335A9 from chromosome 9, complete sequence
          Length = 188085

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 319    ccatcctcatcccagccggtgctgg 343
              ||||||||||||||||||| |||||
Sbjct: 141591 ccatcctcatcccagccggggctgg 141615



to top

>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 240      cgaggagggggtggaggcggc 260
                |||||||||||||||||||||
Sbjct: 11547248 cgaggagggggtggaggcggc 11547268



to top

>dbj|AP005383.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OJ1034_C08
          Length = 154441

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 240    cgaggagggggtggaggcggc 260
              |||||||||||||||||||||
Sbjct: 101382 cgaggagggggtggaggcggc 101402



to top

>dbj|AP004694.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
            clone:P0467G09
          Length = 158204

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 240  cgaggagggggtggaggcggc 260
            |||||||||||||||||||||
Sbjct: 7519 cgaggagggggtggaggcggc 7539



to top

>emb|AJ404349.1|HIM404349 Human immunodeficiency virus type 1 proviral partial rt gene for
           reverse transcriptase, patient 5-8
          Length = 702

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 532 catatttttcacttcctttaa 552
           |||||||||||||||||||||
Sbjct: 293 catatttttcacttcctttaa 313



to top

>dbj|AK120164.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013031E22, full
           insert sequence
          Length = 4010

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 240 cgaggagggggtggaggcggc 260
           |||||||||||||||||||||
Sbjct: 465 cgaggagggggtggaggcggc 445



to top

>dbj|AK101041.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033001H11, full
            insert sequence
          Length = 4372

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 240  cgaggagggggtggaggcggc 260
            |||||||||||||||||||||
Sbjct: 2801 cgaggagggggtggaggcggc 2821



to top

>dbj|AK073557.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033046C19, full
            insert sequence
          Length = 2846

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 213  ccaccgccatcccgccggtcaccac 237
            ||||||||||| |||||||||||||
Sbjct: 2416 ccaccgccatctcgccggtcaccac 2392



to top

>emb|BX927177.12| Zebrafish DNA sequence from clone DKEY-78D16 in linkage group 19,
             complete sequence
          Length = 154891

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 533   atatttttcacttcctttaac 553
             |||||||||||||||||||||
Sbjct: 40325 atatttttcacttcctttaac 40305



to top

>ref|XM_422691.1| PREDICTED: Gallus gallus hypothetical gene supported by CR385188
           (LOC424878), mRNA
          Length = 1025

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 560 cagtgcacttgatctttcag 579
           ||||||||||||||||||||
Sbjct: 864 cagtgcacttgatctttcag 883



to top

>gb|AC101844.7| Mus musculus chromosome 7, clone RP23-257M22, complete sequence
          Length = 197827

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 349    taccatatatcataggctgg 368
              ||||||||||||||||||||
Sbjct: 196625 taccatatatcataggctgg 196606



to top

>gb|AE002124.1| Ureaplasma parvum serovar 3 str. ATCC 700970 section 25 of 59 of the
            complete genome
          Length = 10948

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 523  catcaatttcatatttttca 542
            ||||||||||||||||||||
Sbjct: 7539 catcaatttcatatttttca 7520



to top

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 581     aaagtgaacaaacccaaaatccct 604
               ||||||| ||||||||||||||||
Sbjct: 6053279 aaagtgagcaaacccaaaatccct 6053302



to top

>gb|AC024204.1| Caenorhabditis elegans cosmid Y73B6A, complete sequence
          Length = 93268

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 523   catcaatttcatatttttca 542
             ||||||||||||||||||||
Sbjct: 92090 catcaatttcatatttttca 92071



to top

>gb|AC109992.6| Homo sapiens 3 BAC RP11-383G6 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 112544

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 526   caatttcatatttttcactt 545
             ||||||||||||||||||||
Sbjct: 59494 caatttcatatttttcactt 59475



to top

>emb|AL163300.2|HS21C100 Homo sapiens chromosome 21 segment HS21C100
          Length = 340000

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 241    gaggagggggtggaggcggc 260
              ||||||||||||||||||||
Sbjct: 238394 gaggagggggtggaggcggc 238375



to top

>emb|Z99289.1|HS142L7 Human DNA sequence from clone RP1-142L7 on chromosome 6q21 Contains the
              3' end of the WISP3 gene for WNT1 inducible signaling
              pathway protein 3, the gene for epsilon tubulin, two novel
              genes, the 3' end of the LAMA4 gene for laminin alpha 4,
              the 5' end of a novel gene and a CpG island, complete
              sequence
          Length = 190778

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 587    aacaaacccaaaatccctct 606
              ||||||||||||||||||||
Sbjct: 164509 aacaaacccaaaatccctct 164528



to top

>emb|Z86090.10|HS229A8 Human DNA sequence from clone CTA-229A8 on chromosome 22q13 Contains an
             RPL4 (60S Ribosomal Protein L4) and a GAPD (Liver
             Glyceraldehyde 3-Phosphate Dehydrogenase (EC 1.2.1.12))
             pseudogene, the GPR24 gene for G protein-coupled receptor
             24 (SLC1), ESTs, an STS, GSSs, genomic marker D22S279, a
             ca repeat polymorphism and a putative CpG island, complete
             sequence
          Length = 122557

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 413   gtagccaccataaggtggaagagg 436
             |||||||||| |||||||||||||
Sbjct: 43328 gtagccaccagaaggtggaagagg 43351



to top

>emb|AL356415.26| Human DNA sequence from clone RP3-337D23 on chromosome 6q23.3-25.3
           Contains the 5' end of tomosyn (LOC134957) (contains
           FLJ30922), part of a putative novel gene, a putative
           novel gene and a CpG island, complete sequence
          Length = 140999

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 581 aaagtgaacaaacccaaaat 600
           ||||||||||||||||||||
Sbjct: 805 aaagtgaacaaacccaaaat 786



to top

>emb|AL137021.15| Human DNA sequence from clone RP11-202A15 on chromosome 9q31.1-32,
             complete sequence
          Length = 80658

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 133   agttaacaaatccatcacct 152
             ||||||||||||||||||||
Sbjct: 22215 agttaacaaatccatcacct 22196



to top

>emb|AL079338.16|HSJ841K13 Human DNA sequence from clone RP5-841K13 on chromosome 20 Contains part
             of the gene for a novel protein (LOC284776), complete
             sequence
          Length = 122466

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 426   ggtggaagaggatagctagg 445
             ||||||||||||||||||||
Sbjct: 72845 ggtggaagaggatagctagg 72864



to top

>emb|AL031286.2|HS681J21 Human DNA sequence from clone RP4-681J21 on chromosome 1q23.2-24.3
             Contains the 5' end of a novel gene, the 5' end of the
             gene for expressed in hematopoietic cells (heart, liver)
             (HLL) and a CpG island, complete sequence
          Length = 68770

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 525   tcaatttcatatttttcact 544
             ||||||||||||||||||||
Sbjct: 62175 tcaatttcatatttttcact 62156



to top

>gb|AC117470.8| Homo sapiens 3 BAC RP11-529P9 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 190630

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 52     caacagaacaagtctcaggt 71
              ||||||||||||||||||||
Sbjct: 175278 caacagaacaagtctcaggt 175297



to top

>gb|AC113173.2| Homo sapiens chromosome 1 clone RP4-724N10, complete sequence
          Length = 149950

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 153   acaaaagatgcaaggcaagg 172
             ||||||||||||||||||||
Sbjct: 83405 acaaaagatgcaaggcaagg 83386



to top

>dbj|AK024377.1| Homo sapiens cDNA FLJ14315 fis, clone PLACE3000373
          Length = 4126

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 133 agttaacaaatccatcacct 152
           ||||||||||||||||||||
Sbjct: 200 agttaacaaatccatcacct 181



to top

>gb|AC011155.13| Homo sapiens chromosome 18, clone RP11-7K9, complete sequence
          Length = 158371

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 424   aaggtggaagaggatagctaggag 447
             |||||||||||| |||||||||||
Sbjct: 36431 aaggtggaagagaatagctaggag 36408



to top

>gb|AC106811.2| Homo sapiens chromosome 5 clone RP11-551B15, complete sequence
          Length = 148362

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 567   cttgatctttcagcaaagtg 586
             ||||||||||||||||||||
Sbjct: 92344 cttgatctttcagcaaagtg 92325



to top

>gb|AC021146.7| Homo sapiens BAC clone RP11-468N14 from 4, complete sequence
          Length = 217991

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 135    ttaacaaatccatcacctacaaaa 158
              |||||| |||||||||||||||||
Sbjct: 211819 ttaacatatccatcacctacaaaa 211842



to top

>gb|AC091647.4| Homo sapiens chromosome 18, clone RP11-635D8, complete sequence
          Length = 173368

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 424   aaggtggaagaggatagctaggag 447
             |||||||||||| |||||||||||
Sbjct: 11876 aaggtggaagagaatagctaggag 11899



to top

>emb|CR385188.1| Gallus gallus finished cDNA, clone ChEST543d4
          Length = 793

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 560 cagtgcacttgatctttcag 579
           ||||||||||||||||||||
Sbjct: 632 cagtgcacttgatctttcag 651



to top

>gb|AC135158.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1193C08,
              complete sequence
          Length = 111961

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 581    aaagtgaacaaacccaaaatccct 604
              ||||||| ||||||||||||||||
Sbjct: 111814 aaagtgagcaaacccaaaatccct 111837



to top

>gb|AC012476.8|AC012476 Homo sapiens chromosome 15 clone RP11-532F12 map 15q15, complete
            sequence
          Length = 178248

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 133  agttaacaaatccatcacct 152
            ||||||||||||||||||||
Sbjct: 3437 agttaacaaatccatcacct 3456



to top

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 581     aaagtgaacaaacccaaaatccct 604
               ||||||| ||||||||||||||||
Sbjct: 6052492 aaagtgagcaaacccaaaatccct 6052515



to top

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 643      tgacctctccatgaacttca 662
                ||||||||||||||||||||
Sbjct: 18862789 tgacctctccatgaacttca 18862808



to top

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 84       aaagtcttacagggcaaaac 103
                ||||||||||||||||||||
Sbjct: 35377253 aaagtcttacagggcaaaac 35377234



 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 580      caaagtgaacaaacccaaaa 599
                ||||||||||||||||||||
Sbjct: 14980700 caaagtgaacaaacccaaaa 14980681



to top

>gb|AC105732.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBa0090D11, complete sequence
          Length = 174865

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 581   aaagtgaacaaacccaaaatccct 604
             ||||||| ||||||||||||||||
Sbjct: 46755 aaagtgagcaaacccaaaatccct 46778



to top

>gb|AC022405.5|AC022405 Homo sapiens chromosome 15 clone CTD-2339L15 map 15q14, complete sequence
          Length = 111035

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 133    agttaacaaatccatcacct 152
              ||||||||||||||||||||
Sbjct: 100093 agttaacaaatccatcacct 100112



to top

>gb|AC131983.11| Mus musculus chromosome 7, clone RP24-173C11, complete sequence
          Length = 158500

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 349    taccatatatcataggctgg 368
              ||||||||||||||||||||
Sbjct: 140539 taccatatatcataggctgg 140558



to top

>dbj|AP008247.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0784G04
          Length = 157458

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 580   caaagtgaacaaacccaaaa 599
             ||||||||||||||||||||
Sbjct: 25786 caaagtgaacaaacccaaaa 25767



to top

>dbj|AP006530.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
            clone:B1329D01
          Length = 141938

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 580  caaagtgaacaaacccaaaa 599
            ||||||||||||||||||||
Sbjct: 6947 caaagtgaacaaacccaaaa 6928



to top

>gb|AC124290.5| Homo sapiens chromosome 8, clone RP11-89M20, complete sequence
          Length = 198642

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 524   atcaatttcatatttttcac 543
             ||||||||||||||||||||
Sbjct: 51505 atcaatttcatatttttcac 51524



to top

>gb|AC124073.9| Homo sapiens chromosome 8, clone RP11-593P24, complete sequence
          Length = 185250

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 524   atcaatttcatatttttcac 543
             ||||||||||||||||||||
Sbjct: 34952 atcaatttcatatttttcac 34933



to top

>dbj|AP003734.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
            clone:B1088C09
          Length = 154084

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 84   aaagtcttacagggcaaaac 103
            ||||||||||||||||||||
Sbjct: 1202 aaagtcttacagggcaaaac 1183



to top

>dbj|AP003315.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0439E11
          Length = 146083

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 84     aaagtcttacagggcaaaac 103
              ||||||||||||||||||||
Sbjct: 141114 aaagtcttacagggcaaaac 141095



to top

>dbj|AP005845.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0461D06
          Length = 112895

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 643   tgacctctccatgaacttca 662
             ||||||||||||||||||||
Sbjct: 26322 tgacctctccatgaacttca 26341



to top

>dbj|AB025639.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone:MWL2
          Length = 84896

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 590   aaacccaaaatccctcttat 609
             ||||||||||||||||||||
Sbjct: 60517 aaacccaaaatccctcttat 60498



to top

>gb|AC024862.1|AC024862 Caenorhabditis elegans clone Y73B6A, complete sequence
          Length = 93268

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 523   catcaatttcatatttttca 542
             ||||||||||||||||||||
Sbjct: 92090 catcaatttcatatttttca 92071



to top

>dbj|AK069284.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023010F15, full
            insert sequence
          Length = 2855

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 643  tgacctctccatgaacttca 662
            ||||||||||||||||||||
Sbjct: 2779 tgacctctccatgaacttca 2798



to top

>gb|AC006198.1|AC006198 Homo sapiens, clone hRPK.3_A_1, complete sequence
          Length = 163410

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 426   ggtggaagaggatagctagg 445
             ||||||||||||||||||||
Sbjct: 47805 ggtggaagaggatagctagg 47786



to top

>emb|CR354561.11| Zebrafish DNA sequence from clone DKEY-203K18 in linkage group 25,
             complete sequence
          Length = 163175

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 77    tcaagaaaaagtcttacagg 96
             ||||||||||||||||||||
Sbjct: 26197 tcaagaaaaagtcttacagg 26178



to top

>dbj|AP006252.1| Homo sapiens genomic DNA, chromosome 8, clone:RP11-771I6, complete
              sequence
          Length = 153493

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 524    atcaatttcatatttttcac 543
              ||||||||||||||||||||
Sbjct: 147137 atcaatttcatatttttcac 147118



to top

>dbj|AP006244.1| Homo sapiens genomic DNA, chromosome 8, clone:RP11-108H17, complete
             sequence
          Length = 169401

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 524   atcaatttcatatttttcac 543
             ||||||||||||||||||||
Sbjct: 47326 atcaatttcatatttttcac 47307



to top

>gb|AC134828.4| Mus musculus BAC clone RP24-472K15 from 6, complete sequence
          Length = 163810

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 133   agttaacaaatccatcacct 152
             ||||||||||||||||||||
Sbjct: 26070 agttaacaaatccatcacct 26051



to top

>gb|AC132618.3| Mus musculus BAC clone RP23-238K12 from 6, complete sequence
          Length = 155828

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 133    agttaacaaatccatcacct 152
              ||||||||||||||||||||
Sbjct: 148198 agttaacaaatccatcacct 148179



to top

>emb|AL773603.1|HS7B7 Homo sapiens chromosome 21 from BAC clone 7B7, map 21q22.3
          Length = 94746

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 241   gaggagggggtggaggcggc 260
             ||||||||||||||||||||
Sbjct: 57791 gaggagggggtggaggcggc 57772



to top

>dbj|AP000082.1| Homo sapiens genomic DNA, chromosome 8p11.2, senescence gene region,
            section 18/19
          Length = 100000

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 524  atcaatttcatatttttcac 543
            ||||||||||||||||||||
Sbjct: 3940 atcaatttcatatttttcac 3959


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7,482,684
Number of Sequences: 3902068
Number of extensions: 7482684
Number of successful extensions: 144684
Number of sequences better than 10.0: 95
Number of HSP's better than 10.0 without gapping: 98
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 143841
Number of HSP's gapped (non-prelim): 828
length of query: 679
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 656
effective length of database: 17,143,297,704
effective search space: 11246003293824
effective search space used: 11246003293824
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top