No.
Definition
Score (bits)
E Value
1 ref|NM_194876.1| Oryza sativa (japonica cultivar-group) putative...
504
e-139
2 gb|BT018606.1| Zea mays clone EL01N0450E05.d mRNA sequence
385
e-103
3 gb|AY104865.1| Zea mays PCO099871 mRNA sequence
385
e-103
4 dbj|AK066347.1| Oryza sativa (japonica cultivar-group) cDNA clon...
357
3e-95
5 gb|AC098565.3| Oryza sativa chromosome 10 clone OSJNBa0028C16, c...
210
4e-51
6 dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D...
210
4e-51
7 gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome...
210
4e-51
8 gb|AC146948.2| Oryza sativa (japonica cultivar-group) chromosome...
178
2e-41
9 dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D...
178
2e-41
10 gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome...
178
2e-41
11 ref|NM_116309.2| Arabidopsis thaliana RNA binding / nucleic acid...
62
3e-06
12 ref|NM_001036489.1| Arabidopsis thaliana RNA binding / nucleic a...
62
3e-06
13 emb|AL161472.2|ATCHRIV2 Arabidopsis thaliana DNA chromosome 4, c...
62
3e-06
14 gb|AY113171.1| Arabidopsis thaliana AT4g00830/A_TM018A10_14 mRNA...
62
3e-06
15 gb|AF367357.1| Arabidopsis thaliana AT4g00830/A_TM018A10_14 mRNA...
62
3e-06
16 gb|AF013294.1|TM018A10 Arabidopsis thaliana BAC TM018A10
62
3e-06
17 dbj|AP004939.1| Lotus japonicus genomic DNA, chromosome 1, clone...
60
1e-05
18 gb|AC139854.21| Medicago truncatula clone mth2-16e16, complete s...
54
6e-04
19 emb|BX827625.1|CNS0A4H2 Arabidopsis thaliana Full-length cDNA Co...
50
0.010
20 emb|BX826993.1|CNS0A37N Arabidopsis thaliana Full-length cDNA Co...
50
0.010
21 gb|BT013793.1| Lycopersicon esculentum clone 132713F, mRNA sequence
46
0.15
22 ref|XM_542593.2| PREDICTED: Canis familiaris similar to Diaphano...
44
0.59
23 ref|XM_852251.1| PREDICTED: Canis familiaris similar to Diaphano...
44
0.59
24 gb|AF495972.1| Drosophila simulans strain New Caledonia CG3588 (...
44
0.59
25 emb|AL935149.16| Mouse DNA sequence from clone RP23-70N3 on chro...
44
0.59
26 dbj|AK138958.1| Mus musculus adult male aorta and vein cDNA, RIK...
44
0.59
27 dbj|AK014679.1| Mus musculus 0 day neonate head cDNA, RIKEN full...
44
0.59
28 ref|XM_481319.1| Oryza sativa (japonica cultivar-group), mRNA
42
2.3
29 gb|AC145808.2| Oryza sativa (japonica cultivar-group) chromosome...
42
2.3
30 gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome
42
2.3
31 gb|AC161187.5| Mus musculus chromosome 5, clone RP23-297H22, com...
42
2.3
32 gb|AC138288.13| Mus musculus chromosome 9, clone RP23-464K22, co...
42
2.3
33 gb|AC110251.11| Mus musculus chromosome 5, clone RP23-263O8, com...
42
2.3
34 emb|AL645665.11| Human DNA sequence from clone RP11-963P9 on chr...
42
2.3
35 emb|AL451107.6| Human DNA sequence from clone RP11-14C22 on chro...
42
2.3
36 emb|BX842572.1| Mycobacterium tuberculosis H37Rv complete genome...
42
2.3
37 emb|BX248334.1| Mycobacterium bovis subsp. bovis AF2122/97 compl...
42
2.3
38 emb|BX897692.16| Zebrafish DNA sequence from clone DKEY-34F9 in ...
42
2.3
39 gb|AC160983.2| Mus musculus BAC clone RP23-335A9 from chromosome...
42
2.3
40 dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D...
42
2.3
41 dbj|AP005383.3| Oryza sativa (japonica cultivar-group) genomic D...
42
2.3
42 dbj|AP004694.3| Oryza sativa (japonica cultivar-group) genomic D...
42
2.3
43 emb|AJ404349.1|HIM404349 Human immunodeficiency virus type 1 pro...
42
2.3
44 dbj|AK120164.1| Oryza sativa (japonica cultivar-group) cDNA clon...
42
2.3
45 dbj|AK101041.1| Oryza sativa (japonica cultivar-group) cDNA clon...
42
2.3
46 dbj|AK073557.1| Oryza sativa (japonica cultivar-group) cDNA clon...
42
2.3
47 emb|BX927177.12| Zebrafish DNA sequence from clone DKEY-78D16 in...
42
2.3
48 ref|XM_422691.1| PREDICTED: Gallus gallus hypothetical gene supp...
40
9.3
49 gb|AC101844.7| Mus musculus chromosome 7, clone RP23-257M22, com...
40
9.3
50 gb|AE002124.1| Ureaplasma parvum serovar 3 str. ATCC 700970 sect...
40
9.3
51 gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
40
9.3
52 gb|AC024204.1| Caenorhabditis elegans cosmid Y73B6A, complete se...
40
9.3
53 gb|AC109992.6| Homo sapiens 3 BAC RP11-383G6 (Roswell Park Cance...
40
9.3
54 emb|AL163300.2|HS21C100 Homo sapiens chromosome 21 segment HS21C100
40
9.3
55 emb|Z99289.1|HS142L7 Human DNA sequence from clone RP1-142L7 on ...
40
9.3
56 emb|Z86090.10|HS229A8 Human DNA sequence from clone CTA-229A8 on...
40
9.3
57 emb|AL356415.26| Human DNA sequence from clone RP3-337D23 on chr...
40
9.3
58 emb|AL137021.15| Human DNA sequence from clone RP11-202A15 on ch...
40
9.3
59 emb|AL079338.16|HSJ841K13 Human DNA sequence from clone RP5-841K...
40
9.3
60 emb|AL031286.2|HS681J21 Human DNA sequence from clone RP4-681J21...
40
9.3
61 gb|AC117470.8| Homo sapiens 3 BAC RP11-529P9 (Roswell Park Cance...
40
9.3
62 gb|AC113173.2| Homo sapiens chromosome 1 clone RP4-724N10, compl...
40
9.3
63 dbj|AK024377.1| Homo sapiens cDNA FLJ14315 fis, clone PLACE3000373
40
9.3
64 gb|AC011155.13| Homo sapiens chromosome 18, clone RP11-7K9, comp...
40
9.3
65 gb|AC106811.2| Homo sapiens chromosome 5 clone RP11-551B15, comp...
40
9.3
66 gb|AC021146.7| Homo sapiens BAC clone RP11-468N14 from 4, comple...
40
9.3
67 gb|AC091647.4| Homo sapiens chromosome 18, clone RP11-635D8, com...
40
9.3
68 emb|CR385188.1| Gallus gallus finished cDNA, clone ChEST543d4
40
9.3
69 gb|AC135158.2| Oryza sativa (japonica cultivar-group) chromosome...
40
9.3
70 gb|AC012476.8|AC012476 Homo sapiens chromosome 15 clone RP11-532...
40
9.3
71 dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D...
40
9.3
72 dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D...
40
9.3
73 dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D...
40
9.3
74 gb|AC105732.3| Oryza sativa (japonica cultivar-group) chromosome...
40
9.3
75 gb|AC022405.5|AC022405 Homo sapiens chromosome 15 clone CTD-2339...
40
9.3
76 gb|AC131983.11| Mus musculus chromosome 7, clone RP24-173C11, co...
40
9.3
77 dbj|AP008247.2| Oryza sativa (japonica cultivar-group) genomic D...
40
9.3
78 dbj|AP006530.3| Oryza sativa (japonica cultivar-group) genomic D...
40
9.3
79 gb|AC124290.5| Homo sapiens chromosome 8, clone RP11-89M20, comp...
40
9.3
80 gb|AC124073.9| Homo sapiens chromosome 8, clone RP11-593P24, com...
40
9.3
81 dbj|AP003734.3| Oryza sativa (japonica cultivar-group) genomic D...
40
9.3
82 dbj|AP003315.1| Oryza sativa (japonica cultivar-group) genomic D...
40
9.3
83 dbj|AP005845.2| Oryza sativa (japonica cultivar-group) genomic D...
40
9.3
84 dbj|AB025639.1| Arabidopsis thaliana genomic DNA, chromosome 3, ...
40
9.3
85 gb|AC024862.1|AC024862 Caenorhabditis elegans clone Y73B6A, comp...
40
9.3
86 dbj|AK069284.1| Oryza sativa (japonica cultivar-group) cDNA clon...
40
9.3
87 gb|AC006198.1|AC006198 Homo sapiens, clone hRPK.3_A_1, complete ...
40
9.3
88 emb|CR354561.11| Zebrafish DNA sequence from clone DKEY-203K18 i...
40
9.3
89 dbj|AP006252.1| Homo sapiens genomic DNA, chromosome 8, clone:RP...
40
9.3
90 dbj|AP006244.1| Homo sapiens genomic DNA, chromosome 8, clone:RP...
40
9.3
91 gb|AC134828.4| Mus musculus BAC clone RP24-472K15 from 6, comple...
40
9.3
92 gb|AC132618.3| Mus musculus BAC clone RP23-238K12 from 6, comple...
40
9.3
93 emb|AL773603.1|HS7B7 Homo sapiens chromosome 21 from BAC clone 7...
40
9.3
94 dbj|AP000082.1| Homo sapiens genomic DNA, chromosome 8p11.2, sen...
40
9.3
>gb|AC098565.3 | Oryza sativa chromosome 10 clone OSJNBa0028C16, complete sequence
Length = 166757
Score = 210 bits (106), Expect = 4e-51
Identities = 142/154 (92%)
Strand = Plus / Plus
Query: 522 ccatcaatttcatatttttcacttcctttaactgccttcagtgcacttgatctttcagca 581
|||||||||||||| ||||| ||||||||||||||||||| |||||||||||||||||||
Sbjct: 65093 ccatcaatttcatacttttcgcttcctttaactgccttcaatgcacttgatctttcagca 65152
Query: 582 aagtgaacaaacccaaaatccctcttatgcccggccttagcaggcggtaaaacaattttt 641
|| ||||||||||||||||| ||||||| ||| |||||||||||||||||||| | ||||
Sbjct: 65153 aaatgaacaaacccaaaatctctcttattcccagccttagcaggcggtaaaacgactttt 65212
Query: 642 gtgacctctccatgaacttcaaagagatccttaa 675
|||||||||||||||| |||||||| |||||||
Sbjct: 65213 gtgacctctccatgaatttcaaagatctccttaa 65246
Score = 151 bits (76), Expect = 4e-33
Identities = 141/162 (87%), Gaps = 3/162 (1%)
Strand = Plus / Plus
Query: 365 ctggttgaatccagggccaccacca---taggcaccatatgggtctcccatgtagccacc 421
||||||||||||||| ||||||||| || ||||||||||| |||||||||||||||||
Sbjct: 64725 ctggttgaatccaggaccaccaccaccataagcaccatatggatctcccatgtagccacc 64784
Query: 422 ataaggtggaagaggatagctaggagctcctccaggcttgaaggagtggtcaggtttctt 481
|||||| ||||||||| | | |||||||||||||||||||| ||||| ||||| |||||
Sbjct: 64785 ataaggaggaagaggaaaatttggagctcctccaggcttgaacgagtgatcaggcttctt 64844
Query: 482 atcactcaaaggtttggccatggaaacttcgagcacttgccc 523
|| | ||| || ||||||||||| ||||| |||||||||||
Sbjct: 64845 gtctcccaatggcttggccatggatacttccagcacttgccc 64886
Score = 107 bits (54), Expect = 5e-20
Identities = 81/90 (90%)
Strand = Plus / Plus
Query: 278 cagaacatagccaaggcggccatcagggagcaccatcggaaccatcctcatcccagccgg 337
||||||||| || || || || |||||||||||||| || ||||||||||| ||||| ||
Sbjct: 62990 cagaacatatcccagacgaccgtcagggagcaccattggtaccatcctcattccagctgg 63049
Query: 338 tgctggtcctctaccatatatcataggctg 367
||||||||||||||||||||||||||||||
Sbjct: 63050 tgctggtcctctaccatatatcataggctg 63079
Score = 107 bits (54), Expect = 5e-20
Identities = 81/90 (90%)
Strand = Plus / Plus
Query: 278 cagaacatagccaaggcggccatcagggagcaccatcggaaccatcctcatcccagccgg 337
||||||||| || || || || |||||||||||||| || ||||||||||| ||||| ||
Sbjct: 51927 cagaacatatcccagacgaccgtcagggagcaccattggtaccatcctcattccagctgg 51986
Query: 338 tgctggtcctctaccatatatcataggctg 367
||||||||||||||||||||||||||||||
Sbjct: 51987 tgctggtcctctaccatatatcataggctg 52016
Score = 91.7 bits (46), Expect = 3e-15
Identities = 70/78 (89%)
Strand = Plus / Plus
Query: 598 aatccctcttatgcccggccttagcaggcggtaaaacaatttttgtgacctctccatgaa 657
|||| ||||||| ||| |||||||||||||||||||| | ||||||||||||||||||||
Sbjct: 52717 aatctctcttattccctgccttagcaggcggtaaaacgacttttgtgacctctccatgaa 52776
Query: 658 cttcaaagagatccttaa 675
|||||||| |||||||
Sbjct: 52777 tttcaaagatctccttaa 52794
Score = 63.9 bits (32), Expect = 6e-07
Identities = 76/90 (84%), Gaps = 3/90 (3%)
Strand = Plus / Plus
Query: 278 cagaacatagccaaggcggccatcagggagcaccatcggaaccatcctcatcccagccgg 337
||||||||| || || || || |||||||||||||| || |||||| || | ||| ||
Sbjct: 20285 cagaacatatcccagacgaccgtcagggagcaccattggtaccatc---attcgagctgg 20341
Query: 338 tgctggtcctctaccatatatcataggctg 367
|||||||||||||||||||||||| |||||
Sbjct: 20342 tgctggtcctctaccatatatcatgggctg 20371
Score = 48.1 bits (24), Expect = 0.038
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 536 tttttcacttcctttaactgccttcagtgcacttga 571
|||||| ||||||| ||||||||||| |||||||||
Sbjct: 52677 tttttcgcttccttaaactgccttcaatgcacttga 52712
>dbj|AP008216.1 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
sequence
Length = 22685906
Score = 210 bits (106), Expect = 4e-51
Identities = 142/154 (92%)
Strand = Plus / Plus
Query: 522 ccatcaatttcatatttttcacttcctttaactgccttcagtgcacttgatctttcagca 581
|||||||||||||| ||||| ||||||||||||||||||| |||||||||||||||||||
Sbjct: 3095461 ccatcaatttcatacttttcgcttcctttaactgccttcaatgcacttgatctttcagca 3095520
Query: 582 aagtgaacaaacccaaaatccctcttatgcccggccttagcaggcggtaaaacaattttt 641
|| ||||||||||||||||| ||||||| ||| |||||||||||||||||||| | ||||
Sbjct: 3095521 aaatgaacaaacccaaaatctctcttattcccagccttagcaggcggtaaaacgactttt 3095580
Query: 642 gtgacctctccatgaacttcaaagagatccttaa 675
|||||||||||||||| |||||||| |||||||
Sbjct: 3095581 gtgacctctccatgaatttcaaagatctccttaa 3095614
Score = 151 bits (76), Expect = 4e-33
Identities = 141/162 (87%), Gaps = 3/162 (1%)
Strand = Plus / Plus
Query: 365 ctggttgaatccagggccaccacca---taggcaccatatgggtctcccatgtagccacc 421
||||||||||||||| ||||||||| || ||||||||||| |||||||||||||||||
Sbjct: 3095093 ctggttgaatccaggaccaccaccaccataagcaccatatggatctcccatgtagccacc 3095152
Query: 422 ataaggtggaagaggatagctaggagctcctccaggcttgaaggagtggtcaggtttctt 481
|||||| ||||||||| | | |||||||||||||||||||| ||||| ||||| |||||
Sbjct: 3095153 ataaggaggaagaggaaaatttggagctcctccaggcttgaacgagtgatcaggcttctt 3095212
Query: 482 atcactcaaaggtttggccatggaaacttcgagcacttgccc 523
|| | ||| || ||||||||||| ||||| |||||||||||
Sbjct: 3095213 gtctcccaatggcttggccatggatacttccagcacttgccc 3095254
Score = 107 bits (54), Expect = 5e-20
Identities = 81/90 (90%)
Strand = Plus / Plus
Query: 278 cagaacatagccaaggcggccatcagggagcaccatcggaaccatcctcatcccagccgg 337
||||||||| || || || || |||||||||||||| || ||||||||||| ||||| ||
Sbjct: 3093358 cagaacatatcccagacgaccgtcagggagcaccattggtaccatcctcattccagctgg 3093417
Query: 338 tgctggtcctctaccatatatcataggctg 367
||||||||||||||||||||||||||||||
Sbjct: 3093418 tgctggtcctctaccatatatcataggctg 3093447
Score = 107 bits (54), Expect = 5e-20
Identities = 81/90 (90%)
Strand = Plus / Plus
Query: 278 cagaacatagccaaggcggccatcagggagcaccatcggaaccatcctcatcccagccgg 337
||||||||| || || || || |||||||||||||| || ||||||||||| ||||| ||
Sbjct: 3082295 cagaacatatcccagacgaccgtcagggagcaccattggtaccatcctcattccagctgg 3082354
Query: 338 tgctggtcctctaccatatatcataggctg 367
||||||||||||||||||||||||||||||
Sbjct: 3082355 tgctggtcctctaccatatatcataggctg 3082384
Score = 91.7 bits (46), Expect = 3e-15
Identities = 70/78 (89%)
Strand = Plus / Plus
Query: 598 aatccctcttatgcccggccttagcaggcggtaaaacaatttttgtgacctctccatgaa 657
|||| ||||||| ||| |||||||||||||||||||| | ||||||||||||||||||||
Sbjct: 3083085 aatctctcttattccctgccttagcaggcggtaaaacgacttttgtgacctctccatgaa 3083144
Query: 658 cttcaaagagatccttaa 675
|||||||| |||||||
Sbjct: 3083145 tttcaaagatctccttaa 3083162
Score = 63.9 bits (32), Expect = 6e-07
Identities = 76/90 (84%), Gaps = 3/90 (3%)
Strand = Plus / Plus
Query: 278 cagaacatagccaaggcggccatcagggagcaccatcggaaccatcctcatcccagccgg 337
||||||||| || || || || |||||||||||||| || |||||| || | ||| ||
Sbjct: 3050653 cagaacatatcccagacgaccgtcagggagcaccattggtaccatc---attcgagctgg 3050709
Query: 338 tgctggtcctctaccatatatcataggctg 367
|||||||||||||||||||||||| |||||
Sbjct: 3050710 tgctggtcctctaccatatatcatgggctg 3050739
Score = 48.1 bits (24), Expect = 0.038
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 536 tttttcacttcctttaactgccttcagtgcacttga 571
|||||| ||||||| ||||||||||| |||||||||
Sbjct: 3083045 tttttcgcttccttaaactgccttcaatgcacttga 3083080
>gb|AE016959.3 | Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
Length = 22698374
Score = 210 bits (106), Expect = 4e-51
Identities = 142/154 (92%)
Strand = Plus / Plus
Query: 522 ccatcaatttcatatttttcacttcctttaactgccttcagtgcacttgatctttcagca 581
|||||||||||||| ||||| ||||||||||||||||||| |||||||||||||||||||
Sbjct: 3095382 ccatcaatttcatacttttcgcttcctttaactgccttcaatgcacttgatctttcagca 3095441
Query: 582 aagtgaacaaacccaaaatccctcttatgcccggccttagcaggcggtaaaacaattttt 641
|| ||||||||||||||||| ||||||| ||| |||||||||||||||||||| | ||||
Sbjct: 3095442 aaatgaacaaacccaaaatctctcttattcccagccttagcaggcggtaaaacgactttt 3095501
Query: 642 gtgacctctccatgaacttcaaagagatccttaa 675
|||||||||||||||| |||||||| |||||||
Sbjct: 3095502 gtgacctctccatgaatttcaaagatctccttaa 3095535
Score = 151 bits (76), Expect = 4e-33
Identities = 141/162 (87%), Gaps = 3/162 (1%)
Strand = Plus / Plus
Query: 365 ctggttgaatccagggccaccacc---ataggcaccatatgggtctcccatgtagccacc 421
||||||||||||||| |||||||| ||| ||||||||||| |||||||||||||||||
Sbjct: 3095014 ctggttgaatccaggaccaccaccaccataagcaccatatggatctcccatgtagccacc 3095073
Query: 422 ataaggtggaagaggatagctaggagctcctccaggcttgaaggagtggtcaggtttctt 481
|||||| ||||||||| | | |||||||||||||||||||| ||||| ||||| |||||
Sbjct: 3095074 ataaggaggaagaggaaaatttggagctcctccaggcttgaacgagtgatcaggcttctt 3095133
Query: 482 atcactcaaaggtttggccatggaaacttcgagcacttgccc 523
|| | ||| || ||||||||||| ||||| |||||||||||
Sbjct: 3095134 gtctcccaatggcttggccatggatacttccagcacttgccc 3095175
Score = 107 bits (54), Expect = 5e-20
Identities = 81/90 (90%)
Strand = Plus / Plus
Query: 278 cagaacatagccaaggcggccatcagggagcaccatcggaaccatcctcatcccagccgg 337
||||||||| || || || || |||||||||||||| || ||||||||||| ||||| ||
Sbjct: 3093279 cagaacatatcccagacgaccgtcagggagcaccattggtaccatcctcattccagctgg 3093338
Query: 338 tgctggtcctctaccatatatcataggctg 367
||||||||||||||||||||||||||||||
Sbjct: 3093339 tgctggtcctctaccatatatcataggctg 3093368
Score = 107 bits (54), Expect = 5e-20
Identities = 81/90 (90%)
Strand = Plus / Plus
Query: 278 cagaacatagccaaggcggccatcagggagcaccatcggaaccatcctcatcccagccgg 337
||||||||| || || || || |||||||||||||| || ||||||||||| ||||| ||
Sbjct: 3082216 cagaacatatcccagacgaccgtcagggagcaccattggtaccatcctcattccagctgg 3082275
Query: 338 tgctggtcctctaccatatatcataggctg 367
||||||||||||||||||||||||||||||
Sbjct: 3082276 tgctggtcctctaccatatatcataggctg 3082305
Score = 91.7 bits (46), Expect = 3e-15
Identities = 70/78 (89%)
Strand = Plus / Plus
Query: 598 aatccctcttatgcccggccttagcaggcggtaaaacaatttttgtgacctctccatgaa 657
|||| ||||||| ||| |||||||||||||||||||| | ||||||||||||||||||||
Sbjct: 3083006 aatctctcttattccctgccttagcaggcggtaaaacgacttttgtgacctctccatgaa 3083065
Query: 658 cttcaaagagatccttaa 675
|||||||| |||||||
Sbjct: 3083066 tttcaaagatctccttaa 3083083
Score = 63.9 bits (32), Expect = 6e-07
Identities = 76/90 (84%), Gaps = 3/90 (3%)
Strand = Plus / Plus
Query: 278 cagaacatagccaaggcggccatcagggagcaccatcggaaccatcctcatcccagccgg 337
||||||||| || || || || |||||||||||||| || |||||| || | ||| ||
Sbjct: 3050574 cagaacatatcccagacgaccgtcagggagcaccattggtaccatc---attcgagctgg 3050630
Query: 338 tgctggtcctctaccatatatcataggctg 367
|||||||||||||||||||||||| |||||
Sbjct: 3050631 tgctggtcctctaccatatatcatgggctg 3050660
Score = 48.1 bits (24), Expect = 0.038
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 536 tttttcacttcctttaactgccttcagtgcacttga 571
|||||| ||||||| ||||||||||| |||||||||
Sbjct: 3082966 tttttcgcttccttaaactgccttcaatgcacttga 3083001
>gb|AC146948.2 | Oryza sativa (japonica cultivar-group) chromosome 11 clone P0782F03 map
near S2137, complete sequence
Length = 197516
Score = 178 bits (90), Expect = 2e-41
Identities = 117/126 (92%)
Strand = Plus / Plus
Query: 530 ttcatatttttcacttcctttaactgccttcagtgcacttgatctttcagcaaagtgaac 589
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 101931 ttcatatttttcgcttcctttaactgccttcagtgcacttgatctttcagcaaagtgaac 101990
Query: 590 aaacccaaaatccctcttatgcccggccttagcaggcggtaaaacaatttttgtgacctc 649
||| |||||||| ||||||||||| |||||||||| || ||||| | ||||||||||||
Sbjct: 101991 aaaaccaaaatctctcttatgcccatccttagcaggtggcaaaacgacttttgtgacctc 102050
Query: 650 tccatg 655
||||||
Sbjct: 102051 tccatg 102056
Score = 159 bits (80), Expect = 1e-35
Identities = 142/162 (87%), Gaps = 3/162 (1%)
Strand = Plus / Plus
Query: 365 ctggttgaatccagggccaccacca---taggcaccatatgggtctcccatgtagccacc 421
||||||||||||||| ||||||||| || ||||||||||| |||||||||||||||||
Sbjct: 101489 ctggttgaatccaggaccaccaccaccataagcaccatatggatctcccatgtagccacc 101548
Query: 422 ataaggtggaagaggatagctaggagctcctccaggcttgaaggagtggtcaggtttctt 481
|||||| ||||| ||| | | ||||||||| | |||||||| ||||| |||||||||||
Sbjct: 101549 ataaggaggaagtggaaaatttggagctcctgctggcttgaacgagtgatcaggtttctt 101608
Query: 482 atcactcaaaggtttggccatggaaacttcgagcacttgccc 523
|||| |||||||||||||||||| ||||| |||||||||||
Sbjct: 101609 gtcacccaaaggtttggccatggatacttccagcacttgccc 101650
Score = 107 bits (54), Expect = 5e-20
Identities = 81/90 (90%)
Strand = Plus / Plus
Query: 278 cagaacatagccaaggcggccatcagggagcaccatcggaaccatcctcatcccagccgg 337
||||||||| ||||| || || |||||||||||||| || ||||||||||| ||||| ||
Sbjct: 101321 cagaacatatccaagacgaccgtcagggagcaccattgggaccatcctcattccagctgg 101380
Query: 338 tgctggtcctctaccatatatcataggctg 367
|||||||||||||||||| |||||||||||
Sbjct: 101381 tgctggtcctctaccatagatcataggctg 101410
Score = 40.1 bits (20), Expect = 9.3
Identities = 50/60 (83%)
Strand = Plus / Plus
Query: 219 ccatcccgccggtcaccacgtcgaggagggggtggaggcggcattccaccaggttgttgc 278
||||||| ||||||||| ||||| || |||||||| || ||||||||||| ||||||
Sbjct: 101181 ccatccctccggtcaccgcgtcgcattggtggtggagggggaattccaccaggctgttgc 101240
>dbj|AP008217.1 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
sequence
Length = 28386948
Score = 178 bits (90), Expect = 2e-41
Identities = 117/126 (92%)
Strand = Plus / Plus
Query: 530 ttcatatttttcacttcctttaactgccttcagtgcacttgatctttcagcaaagtgaac 589
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8021203 ttcatatttttcgcttcctttaactgccttcagtgcacttgatctttcagcaaagtgaac 8021262
Query: 590 aaacccaaaatccctcttatgcccggccttagcaggcggtaaaacaatttttgtgacctc 649
||| |||||||| ||||||||||| |||||||||| || ||||| | ||||||||||||
Sbjct: 8021263 aaaaccaaaatctctcttatgcccatccttagcaggtggcaaaacgacttttgtgacctc 8021322
Query: 650 tccatg 655
||||||
Sbjct: 8021323 tccatg 8021328
Score = 159 bits (80), Expect = 1e-35
Identities = 142/162 (87%), Gaps = 3/162 (1%)
Strand = Plus / Plus
Query: 365 ctggttgaatccagggccaccacca---taggcaccatatgggtctcccatgtagccacc 421
||||||||||||||| ||||||||| || ||||||||||| |||||||||||||||||
Sbjct: 8020761 ctggttgaatccaggaccaccaccaccataagcaccatatggatctcccatgtagccacc 8020820
Query: 422 ataaggtggaagaggatagctaggagctcctccaggcttgaaggagtggtcaggtttctt 481
|||||| ||||| ||| | | ||||||||| | |||||||| ||||| |||||||||||
Sbjct: 8020821 ataaggaggaagtggaaaatttggagctcctgctggcttgaacgagtgatcaggtttctt 8020880
Query: 482 atcactcaaaggtttggccatggaaacttcgagcacttgccc 523
|||| |||||||||||||||||| ||||| |||||||||||
Sbjct: 8020881 gtcacccaaaggtttggccatggatacttccagcacttgccc 8020922
Score = 107 bits (54), Expect = 5e-20
Identities = 81/90 (90%)
Strand = Plus / Plus
Query: 278 cagaacatagccaaggcggccatcagggagcaccatcggaaccatcctcatcccagccgg 337
||||||||| ||||| || || |||||||||||||| || ||||||||||| ||||| ||
Sbjct: 8020593 cagaacatatccaagacgaccgtcagggagcaccattgggaccatcctcattccagctgg 8020652
Query: 338 tgctggtcctctaccatatatcataggctg 367
|||||||||||||||||| |||||||||||
Sbjct: 8020653 tgctggtcctctaccatagatcataggctg 8020682
Score = 42.1 bits (21), Expect = 2.3
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 213 ccaccgccatcccgccggtcaccac 237
||||||||||| |||||||||||||
Sbjct: 14162088 ccaccgccatctcgccggtcaccac 14162064
Score = 40.1 bits (20), Expect = 9.3
Identities = 50/60 (83%)
Strand = Plus / Plus
Query: 219 ccatcccgccggtcaccacgtcgaggagggggtggaggcggcattccaccaggttgttgc 278
||||||| ||||||||| ||||| || |||||||| || ||||||||||| ||||||
Sbjct: 8020453 ccatccctccggtcaccgcgtcgcattggtggtggagggggaattccaccaggctgttgc 8020512
>gb|DP000010.1 | Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
Length = 28369397
Score = 178 bits (90), Expect = 2e-41
Identities = 117/126 (92%)
Strand = Plus / Plus
Query: 530 ttcatatttttcacttcctttaactgccttcagtgcacttgatctttcagcaaagtgaac 589
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8091142 ttcatatttttcgcttcctttaactgccttcagtgcacttgatctttcagcaaagtgaac 8091201
Query: 590 aaacccaaaatccctcttatgcccggccttagcaggcggtaaaacaatttttgtgacctc 649
||| |||||||| ||||||||||| |||||||||| || ||||| | ||||||||||||
Sbjct: 8091202 aaaaccaaaatctctcttatgcccatccttagcaggtggcaaaacgacttttgtgacctc 8091261
Query: 650 tccatg 655
||||||
Sbjct: 8091262 tccatg 8091267
Score = 159 bits (80), Expect = 1e-35
Identities = 142/162 (87%), Gaps = 3/162 (1%)
Strand = Plus / Plus
Query: 365 ctggttgaatccagggccaccacca---taggcaccatatgggtctcccatgtagccacc 421
||||||||||||||| ||||||||| || ||||||||||| |||||||||||||||||
Sbjct: 8090700 ctggttgaatccaggaccaccaccaccataagcaccatatggatctcccatgtagccacc 8090759
Query: 422 ataaggtggaagaggatagctaggagctcctccaggcttgaaggagtggtcaggtttctt 481
|||||| ||||| ||| | | ||||||||| | |||||||| ||||| |||||||||||
Sbjct: 8090760 ataaggaggaagtggaaaatttggagctcctgctggcttgaacgagtgatcaggtttctt 8090819
Query: 482 atcactcaaaggtttggccatggaaacttcgagcacttgccc 523
|||| |||||||||||||||||| ||||| |||||||||||
Sbjct: 8090820 gtcacccaaaggtttggccatggatacttccagcacttgccc 8090861
Score = 107 bits (54), Expect = 5e-20
Identities = 81/90 (90%)
Strand = Plus / Plus
Query: 278 cagaacatagccaaggcggccatcagggagcaccatcggaaccatcctcatcccagccgg 337
||||||||| ||||| || || |||||||||||||| || ||||||||||| ||||| ||
Sbjct: 8090532 cagaacatatccaagacgaccgtcagggagcaccattgggaccatcctcattccagctgg 8090591
Query: 338 tgctggtcctctaccatatatcataggctg 367
|||||||||||||||||| |||||||||||
Sbjct: 8090592 tgctggtcctctaccatagatcataggctg 8090621
Score = 42.1 bits (21), Expect = 2.3
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 213 ccaccgccatcccgccggtcaccac 237
||||||||||| |||||||||||||
Sbjct: 14244090 ccaccgccatctcgccggtcaccac 14244066
Score = 40.1 bits (20), Expect = 9.3
Identities = 50/60 (83%)
Strand = Plus / Plus
Query: 219 ccatcccgccggtcaccacgtcgaggagggggtggaggcggcattccaccaggttgttgc 278
||||||| ||||||||| ||||| || |||||||| || ||||||||||| ||||||
Sbjct: 8090392 ccatccctccggtcaccgcgtcgcattggtggtggagggggaattccaccaggctgttgc 8090451
>emb|Z99289.1 |HS142L7 Human DNA sequence from clone RP1-142L7 on chromosome 6q21 Contains the
3' end of the WISP3 gene for WNT1 inducible signaling
pathway protein 3, the gene for epsilon tubulin, two novel
genes, the 3' end of the LAMA4 gene for laminin alpha 4,
the 5' end of a novel gene and a CpG island, complete
sequence
Length = 190778
Score = 40.1 bits (20), Expect = 9.3
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 587 aacaaacccaaaatccctct 606
||||||||||||||||||||
Sbjct: 164509 aacaaacccaaaatccctct 164528
>emb|Z86090.10 |HS229A8 Human DNA sequence from clone CTA-229A8 on chromosome 22q13 Contains an
RPL4 (60S Ribosomal Protein L4) and a GAPD (Liver
Glyceraldehyde 3-Phosphate Dehydrogenase (EC 1.2.1.12))
pseudogene, the GPR24 gene for G protein-coupled receptor
24 (SLC1), ESTs, an STS, GSSs, genomic marker D22S279, a
ca repeat polymorphism and a putative CpG island, complete
sequence
Length = 122557
Score = 40.1 bits (20), Expect = 9.3
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 413 gtagccaccataaggtggaagagg 436
|||||||||| |||||||||||||
Sbjct: 43328 gtagccaccagaaggtggaagagg 43351
>dbj|AP000082.1 | Homo sapiens genomic DNA, chromosome 8p11.2, senescence gene region,
section 18/19
Length = 100000
Score = 40.1 bits (20), Expect = 9.3
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 524 atcaatttcatatttttcac 543
||||||||||||||||||||
Sbjct: 3940 atcaatttcatatttttcac 3959
Database: nt
Posted date: May 29, 2006 11:10 AM
Number of letters in database: 3,984,495,279
Number of sequences in database: 917,343
Database: /shigen/export/home/twatanab/db/nt/nt.01
Posted date: May 29, 2006 11:16 AM
Number of letters in database: 3,988,174,986
Number of sequences in database: 835,257
Database: /shigen/export/home/twatanab/db/nt/nt.02
Posted date: May 29, 2006 11:21 AM
Number of letters in database: 3,991,246,324
Number of sequences in database: 771,481
Database: /shigen/export/home/twatanab/db/nt/nt.03
Posted date: May 29, 2006 11:27 AM
Number of letters in database: 3,990,718,311
Number of sequences in database: 977,174
Database: /shigen/export/home/twatanab/db/nt/nt.04
Posted date: May 29, 2006 11:29 AM
Number of letters in database: 1,278,410,368
Number of sequences in database: 400,813
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7,482,684
Number of Sequences: 3902068
Number of extensions: 7482684
Number of successful extensions: 144684
Number of sequences better than 10.0: 95
Number of HSP's better than 10.0 without gapping: 98
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 143841
Number of HSP's gapped (non-prelim): 828
length of query: 679
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 656
effective length of database: 17,143,297,704
effective search space: 11246003293824
effective search space used: 11246003293824
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)