ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal15p07
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_186390.2| Oryza sativa (japonica cultivar-group), mRNA 180 3e-42
2dbj|AK060475.1| Oryza sativa (japonica cultivar-group) cDNA clon... 180 3e-42
3dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 121 3e-24
4dbj|AP005454.4| Oryza sativa (japonica cultivar-group) genomic D... 121 3e-24
5dbj|AP003847.3| Oryza sativa (japonica cultivar-group) genomic D... 121 3e-24
6gb|BT018231.1| Zea mays clone EL01N0562D11.c mRNA sequence 113 7e-22
7gb|AY108527.1| Zea mays PCO089202 mRNA sequence 113 7e-22
8gb|AY109152.1| Zea mays PCO089203 mRNA sequence 101 2e-18
9dbj|AK059284.1| Oryza sativa (japonica cultivar-group) cDNA clon... 86 1e-13
10dbj|AK106623.1| Oryza sativa (japonica cultivar-group) cDNA clon... 72 2e-09
11gb|AC084296.12| Oryza sativa chromosome 3 BAC OSJNBb0024J04 geno... 58 3e-05
12gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 58 3e-05
13dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 58 3e-05
14gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, comp... 40 7.9
15gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, com... 40 7.9
16gb|AY029303.1| Strongylocentrotus purpuratus ADAM precursor, mRN... 40 7.9
17ref|XM_743971.1| Aspergillus fumigatus Af293 Rab geranylgeranylt... 40 7.9
18gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, compl... 40 7.9
19emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromos... 40 7.9
20gb|AC011341.3| Homo sapiens chromosome 5 clone CTC-269F1, comple... 40 7.9
21gb|AC008716.7| Homo sapiens chromosome 5 clone CTB-85P21, comple... 40 7.9
22gb|AC067947.6| Homo sapiens BAC clone RP11-492I5 from 2, complet... 40 7.9
23ref|NM_214470.1| Strongylocentrotus purpuratus ADAM (LOC373195),... 40 7.9
24gb|AY487776.1| Natrix tessellata isolate T299 NADH dehydrogenase... 40 7.9
25gb|AY487773.1| Natrix tessellata isolate T157 NADH dehydrogenase... 40 7.9
26gb|AY870641.1| Natrix tessellata voucher CAS 182901 NADH dehydro... 40 7.9
27gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, com... 40 7.9 
>ref|NM_186390.2| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 667

 Score =  180 bits (91), Expect = 3e-42
 Identities = 153/174 (87%)
 Strand = Plus / Minus

                                                                       
Query: 380 tatttaacatcaataaccagcttcccctctgtgatgtttttatcagtggaagcggagatc 439
           ||||| |||||||||||||||||||| |    |||  |||||||||||||||||||||||
Sbjct: 266 tatttcacatcaataaccagcttccctttaccgatagttttatcagtggaagcggagatc 207

                                                                       
Query: 440 ttgaaggtggctggcacgccgcgctcgaccggatcangcacgatctccacgccgctcacc 499
           |||||||| || ||| |||||||  ||||||||||  |||||||||||||||||||||||
Sbjct: 206 ttgaaggttgcgggctcgccgcgggcgaccggatcgggcacgatctccacgccgctcacc 147

                                                                 
Query: 500 ttcaccgggtagtttttgtgcttattgcagtactcgacatctgtgacggcggag 553
           ||||||||||| || |||  |||||||||||||||||| || ||||||||||||
Sbjct: 146 ttcaccgggtacttcttgcccttattgcagtactcgacgtcggtgacggcggag 93



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 87/105 (82%)
 Strand = Plus / Minus

                                                                       
Query: 188 atgctgaacccgaaggagatgcagctcaattcctcatcatgctttccgagcatcttcatc 247
           |||||||||||||| |||||||||||||  |||||||| |  |  || ||||||||||| 
Sbjct: 458 atgctgaacccgaacgagatgcagctcagctcctcatcgttatcacccagcatcttcatg 399

                                                        
Query: 248 tgaatggtgtaagaacctggtggagtgattgatggtaaggtttgc 292
              ||||||||||| ||||||||||||  |||||| | |||||||
Sbjct: 398 gtgatggtgtaagagcctggtggagtgtatgatggcagggtttgc 354
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>dbj|AK060475.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-012-F03, full
           insert sequence
          Length = 678

 Score =  180 bits (91), Expect = 3e-42
 Identities = 153/174 (87%)
 Strand = Plus / Minus

                                                                       
Query: 380 tatttaacatcaataaccagcttcccctctgtgatgtttttatcagtggaagcggagatc 439
           ||||| |||||||||||||||||||| |    |||  |||||||||||||||||||||||
Sbjct: 266 tatttcacatcaataaccagcttccctttaccgatagttttatcagtggaagcggagatc 207

                                                                       
Query: 440 ttgaaggtggctggcacgccgcgctcgaccggatcangcacgatctccacgccgctcacc 499
           |||||||| || ||| |||||||  ||||||||||  |||||||||||||||||||||||
Sbjct: 206 ttgaaggttgcgggctcgccgcgggcgaccggatcgggcacgatctccacgccgctcacc 147

                                                                 
Query: 500 ttcaccgggtagtttttgtgcttattgcagtactcgacatctgtgacggcggag 553
           ||||||||||| || |||  |||||||||||||||||| || ||||||||||||
Sbjct: 146 ttcaccgggtacttcttgcccttattgcagtactcgacgtcggtgacggcggag 93



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 87/105 (82%)
 Strand = Plus / Minus

                                                                       
Query: 188 atgctgaacccgaaggagatgcagctcaattcctcatcatgctttccgagcatcttcatc 247
           |||||||||||||| |||||||||||||  |||||||| |  |  || ||||||||||| 
Sbjct: 458 atgctgaacccgaacgagatgcagctcagctcctcatcgttatcacccagcatcttcatg 399

                                                        
Query: 248 tgaatggtgtaagaacctggtggagtgattgatggtaaggtttgc 292
              ||||||||||| ||||||||||||  |||||| | |||||||
Sbjct: 398 gtgatggtgtaagagcctggtggagtgtatgatggcagggtttgc 354
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score =  121 bits (61), Expect = 3e-24
 Identities = 81/88 (92%)
 Strand = Plus / Minus

                                                                           
Query: 423     cagtggaagcggagatcttgaaggtggctggcacgccgcgctcgaccggatcangcacga 482
               ||||||||||||||||||||||||| || ||| |||||||  ||||||||||  ||||||
Sbjct: 3231342 cagtggaagcggagatcttgaaggttgcgggctcgccgcgggcgaccggatcgggcacga 3231283

                                           
Query: 483     tctccacgccgctcaccttcaccgggta 510
               ||||||||||||||||||||||||||||
Sbjct: 3231282 tctccacgccgctcaccttcaccgggta 3231255



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                     
Query: 188     atgctgaacccgaaggagatgcagctcaattcctcatc 225
               |||||||||||||| |||||||||||||  ||||||||
Sbjct: 3233684 atgctgaacccgaacgagatgcagctcagctcctcatc 3233647



 Score = 44.1 bits (22), Expect = 0.50
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                         
Query: 380     tatttaacatcaataaccagcttccc 405
               ||||| ||||||||||||||||||||
Sbjct: 3233350 tatttcacatcaataaccagcttccc 3233325



 Score = 42.1 bits (21), Expect = 2.0
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                            
Query: 525     tgcagtactcgacatctgtgacggcggag 553
               ||||||||||||| || ||||||||||||
Sbjct: 3231115 tgcagtactcgacgtcggtgacggcggag 3231087
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>dbj|AP005454.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
              clone:P0455F03
          Length = 158201

 Score =  121 bits (61), Expect = 3e-24
 Identities = 81/88 (92%)
 Strand = Plus / Minus

                                                                          
Query: 423    cagtggaagcggagatcttgaaggtggctggcacgccgcgctcgaccggatcangcacga 482
              ||||||||||||||||||||||||| || ||| |||||||  ||||||||||  ||||||
Sbjct: 146332 cagtggaagcggagatcttgaaggttgcgggctcgccgcgggcgaccggatcgggcacga 146273

                                          
Query: 483    tctccacgccgctcaccttcaccgggta 510
              ||||||||||||||||||||||||||||
Sbjct: 146272 tctccacgccgctcaccttcaccgggta 146245



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                    
Query: 188    atgctgaacccgaaggagatgcagctcaattcctcatc 225
              |||||||||||||| |||||||||||||  ||||||||
Sbjct: 148674 atgctgaacccgaacgagatgcagctcagctcctcatc 148637



 Score = 44.1 bits (22), Expect = 0.50
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 380    tatttaacatcaataaccagcttccc 405
              ||||| ||||||||||||||||||||
Sbjct: 148340 tatttcacatcaataaccagcttccc 148315



 Score = 42.1 bits (21), Expect = 2.0
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 525    tgcagtactcgacatctgtgacggcggag 553
              ||||||||||||| || ||||||||||||
Sbjct: 146105 tgcagtactcgacgtcggtgacggcggag 146077
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>dbj|AP003847.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1714_H10
          Length = 191580

 Score =  121 bits (61), Expect = 3e-24
 Identities = 81/88 (92%)
 Strand = Plus / Minus

                                                                         
Query: 423   cagtggaagcggagatcttgaaggtggctggcacgccgcgctcgaccggatcangcacga 482
             ||||||||||||||||||||||||| || ||| |||||||  ||||||||||  ||||||
Sbjct: 41035 cagtggaagcggagatcttgaaggttgcgggctcgccgcgggcgaccggatcgggcacga 40976

                                         
Query: 483   tctccacgccgctcaccttcaccgggta 510
             ||||||||||||||||||||||||||||
Sbjct: 40975 tctccacgccgctcaccttcaccgggta 40948



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                   
Query: 188   atgctgaacccgaaggagatgcagctcaattcctcatc 225
             |||||||||||||| |||||||||||||  ||||||||
Sbjct: 43377 atgctgaacccgaacgagatgcagctcagctcctcatc 43340



 Score = 44.1 bits (22), Expect = 0.50
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 380   tatttaacatcaataaccagcttccc 405
             ||||| ||||||||||||||||||||
Sbjct: 43043 tatttcacatcaataaccagcttccc 43018



 Score = 42.1 bits (21), Expect = 2.0
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 525   tgcagtactcgacatctgtgacggcggag 553
             ||||||||||||| || ||||||||||||
Sbjct: 40808 tgcagtactcgacgtcggtgacggcggag 40780
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>gb|BT018231.1| Zea mays clone EL01N0562D11.c mRNA sequence
          Length = 606

 Score =  113 bits (57), Expect = 7e-22
 Identities = 101/116 (87%)
 Strand = Plus / Minus

                                                                       
Query: 395 accagcttcccctctgtgatgtttttatcagtggaagcggagatcttgaaggtggctggc 454
           |||||||||||||    |||| |||||||||| ||||||||||||||||| ||||| |||
Sbjct: 183 accagcttccccttctcgatggttttatcagtagaagcggagatcttgaaagtggcgggc 124

                                                                   
Query: 455 acgccgcgctcgaccggatcangcacgatctccacgccgctcaccttcaccgggta 510
             |||| |||||||||||||  ||||||||| ||| ||||||||||||||||||||
Sbjct: 123 ttgccgggctcgaccggatcgggcacgatctgcaccccgctcaccttcaccgggta 68



 Score = 42.1 bits (21), Expect = 2.0
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 185 ccaatgctgaacccgaaggagatgcagct 213
           ||||||||||| ||||| |||||||||||
Sbjct: 393 ccaatgctgaagccgaacgagatgcagct 365
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>gb|AY108527.1| Zea mays PCO089202 mRNA sequence
          Length = 666

 Score =  113 bits (57), Expect = 7e-22
 Identities = 101/116 (87%)
 Strand = Plus / Minus

                                                                       
Query: 395 accagcttcccctctgtgatgtttttatcagtggaagcggagatcttgaaggtggctggc 454
           |||||||||||||    |||| |||||||||| ||||||||||||||||| ||||| |||
Sbjct: 262 accagcttccccttctcgatggttttatcagtagaagcggagatcttgaaagtggcgggc 203

                                                                   
Query: 455 acgccgcgctcgaccggatcangcacgatctccacgccgctcaccttcaccgggta 510
             |||| |||||||||||||  ||||||||| ||| ||||||||||||||||||||
Sbjct: 202 ttgccgggctcgaccggatcgggcacgatctgcaccccgctcaccttcaccgggta 147



 Score = 42.1 bits (21), Expect = 2.0
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 185 ccaatgctgaacccgaaggagatgcagct 213
           ||||||||||| ||||| |||||||||||
Sbjct: 472 ccaatgctgaagccgaacgagatgcagct 444
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>gb|AY109152.1| Zea mays PCO089203 mRNA sequence
          Length = 811

 Score =  101 bits (51), Expect = 2e-18
 Identities = 101/118 (85%)
 Strand = Plus / Minus

                                                                       
Query: 395 accagcttcccctctgtgatgtttttatcagtggaagcggagatcttgaaggtggctggc 454
           |||||||||||||    |||| |||||||||| ||||||||||||||||| ||||| |||
Sbjct: 273 accagcttccccttctcgatggttttatcagtagaagcggagatcttgaaagtggcgggc 214

                                                                     
Query: 455 acgccgcgctcgaccggatcangcacgatctccacgccgctcaccttcaccgggtagt 512
             |||| | |||||||||||  ||| ||||| ||| ||||||||||||||||||||||
Sbjct: 213 ttgccgggttcgaccggatcgggcaggatctgcaccccgctcaccttcaccgggtagt 156



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 33/35 (94%)
 Strand = Plus / Minus

                                              
Query: 181 gaagccaatgctgaacccgaaggagatgcagctca 215
           |||||| |||||||||||||| |||||||||||||
Sbjct: 487 gaagccgatgctgaacccgaacgagatgcagctca 453
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>dbj|AK059284.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-025-D07, full
           insert sequence
          Length = 566

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 82/95 (86%)
 Strand = Plus / Minus

                                                                       
Query: 380 tatttaacatcaataaccagcttcccctctgtgatgtttttatcagtggaagcggagatc 439
           ||||| |||||||||||||||||||| |    |||  |||||||||||||||||||||||
Sbjct: 97  tatttcacatcaataaccagcttccctttaccgatagttttatcagtggaagcggagatc 38

                                              
Query: 440 ttgaaggtggctggcacgccgcgctcgaccggatc 474
           |||||||| || ||| |||||||  ||||||||||
Sbjct: 37  ttgaaggttgcgggctcgccgcgggcgaccggatc 3



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 87/105 (82%)
 Strand = Plus / Minus

                                                                       
Query: 188 atgctgaacccgaaggagatgcagctcaattcctcatcatgctttccgagcatcttcatc 247
           |||||||||||||| |||||||||||||  |||||||| |  |  || ||||||||||| 
Sbjct: 289 atgctgaacccgaacgagatgcagctcagctcctcatcgttatcacccagcatcttcatg 230

                                                        
Query: 248 tgaatggtgtaagaacctggtggagtgattgatggtaaggtttgc 292
              ||||||||||| ||||||||||||  |||||| | |||||||
Sbjct: 229 gtgatggtgtaagagcctggtggagtgtatgatggcagggtttgc 185
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>dbj|AK106623.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-113-B04, full
           insert sequence
          Length = 678

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 89/107 (83%)
 Strand = Plus / Minus

                                                                       
Query: 398 agcttcccctctgtgatgtttttatcagtggaagcggagatcttgaaggtggctggcacg 457
           ||||||||||  |||||| ||||||| ||||| |||||||||||||||||||| |||   
Sbjct: 289 agcttccccttagtgatgcttttatccgtggatgcggagatcttgaaggtggccggctgc 230

                                                          
Query: 458 ccgcgctcgaccggatcangcacgatctccacgccgctcaccttcac 504
           ||||   |||| || ||| | |||||||| || ||||||||||||||
Sbjct: 229 ccgctgacgacggggtcagggacgatctctactccgctcaccttcac 183



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 31/32 (96%)
 Strand = Plus / Minus

                                           
Query: 254 gtgtaagaacctggtggagtgattgatggtaa 285
           ||||||||||||||||| ||||||||||||||
Sbjct: 433 gtgtaagaacctggtggggtgattgatggtaa 402
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>gb|AC084296.12| Oryza sativa chromosome 3 BAC OSJNBb0024J04 genomic sequence, complete
             sequence
          Length = 145507

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 67/80 (83%)
 Strand = Plus / Minus

                                                                         
Query: 425   gtggaagcggagatcttgaaggtggctggcacgccgcgctcgaccggatcangcacgatc 484
             ||||| |||||||||||||||||||| |||   ||||   |||| || ||| | ||||||
Sbjct: 88332 gtggatgcggagatcttgaaggtggccggctgcccgctgacgacggggtcagggacgatc 88273

                                 
Query: 485   tccacgccgctcaccttcac 504
             ||||| ||||||||||||||
Sbjct: 88272 tccactccgctcaccttcac 88253
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 67/80 (83%)
 Strand = Plus / Minus

                                                                            
Query: 425      gtggaagcggagatcttgaaggtggctggcacgccgcgctcgaccggatcangcacgatc 484
                ||||| |||||||||||||||||||| |||   ||||   |||| || ||| | ||||||
Sbjct: 32436204 gtggatgcggagatcttgaaggtggccggctgcccgctgacgacggggtcagggacgatc 32436145

                                    
Query: 485      tccacgccgctcaccttcac 504
                ||||| ||||||||||||||
Sbjct: 32436144 tccactccgctcaccttcac 32436125
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 67/80 (83%)
 Strand = Plus / Minus

                                                                            
Query: 425      gtggaagcggagatcttgaaggtggctggcacgccgcgctcgaccggatcangcacgatc 484
                ||||| |||||||||||||||||||| |||   ||||   |||| || ||| | ||||||
Sbjct: 32526714 gtggatgcggagatcttgaaggtggccggctgcccgctgacgacggggtcagggacgatc 32526655

                                    
Query: 485      tccacgccgctcaccttcac 504
                ||||| ||||||||||||||
Sbjct: 32526654 tccactccgctcaccttcac 32526635
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>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence
          Length = 3510148

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                      
Query: 457     gccgcgctcgaccggatcangca 479
               ||||||||||||||||||| |||
Sbjct: 1036205 gccgcgctcgaccggatcaagca 1036183
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>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence
          Length = 4126292

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                      
Query: 457     gccgcgctcgaccggatcangca 479
               ||||||||||||||||||| |||
Sbjct: 2529587 gccgcgctcgaccggatcaagca 2529609
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>gb|AY029303.1| Strongylocentrotus purpuratus ADAM precursor, mRNA, complete cds
          Length = 3072

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 59   acccacgagtgttacacaga 78
            ||||||||||||||||||||
Sbjct: 2068 acccacgagtgttacacaga 2049
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>ref|XM_743971.1| Aspergillus fumigatus Af293 Rab geranylgeranyltransferase, subunit
           beta (Afu7g04460) partial mRNA
          Length = 915

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 235 gagcatcttcatctgaatggtgta 258
           |||||||||| |||||||||||||
Sbjct: 40  gagcatcttcgtctgaatggtgta 63
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>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence
          Length = 4895836

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 477     gcacgatctccacgccgctc 496
               ||||||||||||||||||||
Sbjct: 4662632 gcacgatctccacgccgctc 4662651
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>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence
          Length = 4074542

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                      
Query: 457     gccgcgctcgaccggatcangca 479
               ||||||||||||||||||| |||
Sbjct: 1853041 gccgcgctcgaccggatcaagca 1853019
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>gb|AC011341.3| Homo sapiens chromosome 5 clone CTC-269F1, complete sequence
          Length = 51684

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 174   gggcaaggaagccaatgctg 193
             ||||||||||||||||||||
Sbjct: 30310 gggcaaggaagccaatgctg 30291
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>gb|AC008716.7| Homo sapiens chromosome 5 clone CTB-85P21, complete sequence
          Length = 184589

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 174  gggcaaggaagccaatgctg 193
            ||||||||||||||||||||
Sbjct: 7207 gggcaaggaagccaatgctg 7226
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>gb|AC067947.6| Homo sapiens BAC clone RP11-492I5 from 2, complete sequence
          Length = 137457

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 235    gagcatcttcatctgaatgg 254
              ||||||||||||||||||||
Sbjct: 118102 gagcatcttcatctgaatgg 118121
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>ref|NM_214470.1| Strongylocentrotus purpuratus ADAM (LOC373195), mRNA
          Length = 3072

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 59   acccacgagtgttacacaga 78
            ||||||||||||||||||||
Sbjct: 2068 acccacgagtgttacacaga 2049
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>gb|AY487776.1| Natrix tessellata isolate T299 NADH dehydrogenase subunit 2 (ND2)
           gene, complete cds; mitochondrial
          Length = 1029

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 379 atatttaacatcaataacca 398
           ||||||||||||||||||||
Sbjct: 888 atatttaacatcaataacca 907
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>gb|AY487773.1| Natrix tessellata isolate T157 NADH dehydrogenase subunit 2 (ND2)
           gene, complete cds; mitochondrial
          Length = 1029

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 379 atatttaacatcaataacca 398
           ||||||||||||||||||||
Sbjct: 888 atatttaacatcaataacca 907
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>gb|AY870641.1| Natrix tessellata voucher CAS 182901 NADH dehydrogenase subunit 2
           (ND2) gene, complete cds; mitochondrial
          Length = 1029

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 379 atatttaacatcaataacca 398
           ||||||||||||||||||||
Sbjct: 888 atatttaacatcaataacca 907
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>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence
          Length = 3809201

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                      
Query: 457     gccgcgctcgaccggatcangca 479
               ||||||||||||||||||| |||
Sbjct: 2607302 gccgcgctcgaccggatcaagca 2607280


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,134,863
Number of Sequences: 3902068
Number of extensions: 4134863
Number of successful extensions: 81431
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 81026
Number of HSP's gapped (non-prelim): 398
length of query: 579
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 556
effective length of database: 17,143,297,704
effective search space: 9531673523424
effective search space used: 9531673523424
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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