>VG05_VARV (P32995) Protein G5|
          Length = 434

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 12/34 (35%), Positives = 19/34 (55%)
 Frame = -1

Query: 156 GHWP*VSRTNTHMPYFISIKSHGKMIKVIEEILK 55
           G WP +  T+     F S+ +H KMIK + ++ K
Sbjct: 187 GEWPLIISTDQDTMLFASVDNHPKMIKNLTQLFK 220

>CATC_SCHMA (Q26563) Cathepsin C precursor (EC 3.4.22.-)|
          Length = 454

 Score = 28.5 bits (62), Expect = 4.3
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = +3

Query: 159 KATENYLXEPVLSPQFM*ICSSSREHCKTGF 251
           +   N+  +P+LSPQ +  CS   E C  GF
Sbjct: 261 RLVSNFSEQPILSPQTVVDCSPYSEGCNGGF 291

>SSPP_STAAN (P65826) Staphopain A precursor (EC 3.4.22.48) (Staphylopain A)|
           (Staphylococcal cysteine proteinase A)
          Length = 388

 Score = 28.1 bits (61), Expect = 5.7
 Identities = 23/85 (27%), Positives = 37/85 (43%), Gaps = 4/85 (4%)
 Frame = -3

Query: 301 LGXSKTFLVIXE----LLIPKKPVLQCSRLELQIYINCGDNTGSXR*FSVALWPLAVSFS 134
           L  SK + V+ +     L+ K P L+  +L+    I  G+N    +  +    P +   S
Sbjct: 151 LTNSKGYYVVTQNHKAKLVLKTPRLEDKKLKKTESIPTGNNVTQLKQKASVTMPTSQFKS 210

Query: 133 NKYAYALLYINKVARQNDKSY*GNS 59
           N Y Y   YINK+     +   GN+
Sbjct: 211 NNYTYNEQYINKLENFKIRETQGNN 235

>SSPP_STAAM (P65825) Staphopain A precursor (EC 3.4.22.48) (Staphylopain A)|
           (Staphylococcal cysteine proteinase A)
          Length = 388

 Score = 28.1 bits (61), Expect = 5.7
 Identities = 23/85 (27%), Positives = 37/85 (43%), Gaps = 4/85 (4%)
 Frame = -3

Query: 301 LGXSKTFLVIXE----LLIPKKPVLQCSRLELQIYINCGDNTGSXR*FSVALWPLAVSFS 134
           L  SK + V+ +     L+ K P L+  +L+    I  G+N    +  +    P +   S
Sbjct: 151 LTNSKGYYVVTQNHKAKLVLKTPRLEDKKLKKTESIPTGNNVTQLKQKASVTMPTSQFKS 210

Query: 133 NKYAYALLYINKVARQNDKSY*GNS 59
           N Y Y   YINK+     +   GN+
Sbjct: 211 NNYTYNEQYINKLENFKIRETQGNN 235

>SSPP_STAAC (Q5HEL3) Staphopain A precursor (EC 3.4.22.48) (Staphylopain A)|
           (Staphylococcal cysteine proteinase A)
          Length = 388

 Score = 28.1 bits (61), Expect = 5.7
 Identities = 23/85 (27%), Positives = 37/85 (43%), Gaps = 4/85 (4%)
 Frame = -3

Query: 301 LGXSKTFLVIXE----LLIPKKPVLQCSRLELQIYINCGDNTGSXR*FSVALWPLAVSFS 134
           L  SK + V+ +     L+ K P L+  +L+    I  G+N    +  +    P +   S
Sbjct: 151 LTNSKGYYVVTQNHKAKLVLKTPRLEDKKLKKTESIPTGNNVTQLKQKASVTMPTSQFKS 210

Query: 133 NKYAYALLYINKVARQNDKSY*GNS 59
           N Y Y   YINK+     +   GN+
Sbjct: 211 NNYTYNEQYINKLENFKIRETQGNN 235

>SSPP_STAAW (Q8NVS9) Staphopain A precursor (EC 3.4.22.48) (Staphylopain A)|
           (Staphylococcal cysteine proteinase A)
          Length = 388

 Score = 27.7 bits (60), Expect = 7.4
 Identities = 22/85 (25%), Positives = 37/85 (43%), Gaps = 4/85 (4%)
 Frame = -3

Query: 301 LGXSKTFLVIXE----LLIPKKPVLQCSRLELQIYINCGDNTGSXR*FSVALWPLAVSFS 134
           L  SK + V+ +     L+ K P L+  +L+    I  G+N    +  +    P +   S
Sbjct: 151 LTNSKGYYVVTQNHKAKLVLKTPRLEDKKLKKTESIPTGNNVTQLKQKASVTMPTSQFKS 210

Query: 133 NKYAYALLYINKVARQNDKSY*GNS 59
           N Y Y   Y+NK+     +   GN+
Sbjct: 211 NNYTYNEQYVNKLENFKIRETQGNN 235

>SSPP_STAAS (Q6G824) Staphopain A precursor (EC 3.4.22.48) (Staphylopain A)|
           (Staphylococcal cysteine proteinase A)
          Length = 388

 Score = 27.7 bits (60), Expect = 7.4
 Identities = 22/85 (25%), Positives = 37/85 (43%), Gaps = 4/85 (4%)
 Frame = -3

Query: 301 LGXSKTFLVIXE----LLIPKKPVLQCSRLELQIYINCGDNTGSXR*FSVALWPLAVSFS 134
           L  SK + V+ +     L+ K P L+  +L+    I  G+N    +  +    P +   S
Sbjct: 151 LTNSKGYYVVTQNHKAKLVLKTPRLEDKKLKKTESIPTGNNVTQLKQKASVTMPTSQFKS 210

Query: 133 NKYAYALLYINKVARQNDKSY*GNS 59
           N Y Y   Y+NK+     +   GN+
Sbjct: 211 NNYTYNEQYVNKLENFKIRETQGNN 235

>VG05_VACCC (P21026) Protein G5|
          Length = 434

 Score = 27.7 bits (60), Expect = 7.4
 Identities = 12/34 (35%), Positives = 18/34 (52%)
 Frame = -1

Query: 156 GHWP*VSRTNTHMPYFISIKSHGKMIKVIEEILK 55
           G WP +  T+     F S  +H KMIK + ++ K
Sbjct: 187 GEWPLIISTDQDTMLFASTDNHPKMIKNLTQLFK 220


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 38,694,468
Number of Sequences: 219361
Number of extensions: 628038
Number of successful extensions: 1195
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1191
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1195
length of database: 80,573,946
effective HSP length: 87
effective length of database: 61,489,539
effective search space used: 1475748936
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)