>emb|AL691512.11| Mouse DNA sequence from clone RP23-440L5 on chromosome 4 Contains a CpG
             island, complete sequence
          Length = 206422

 Score = 46.1 bits (23), Expect = 0.072
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 2     ttttaaaaacacttacatttaaa 24
             |||||||||||||||||||||||
Sbjct: 79444 ttttaaaaacacttacatttaaa 79466

>gb|AC122737.7| Mus musculus chromosome 3, clone RP23-302O3, complete sequence
          Length = 179544

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 33    caagtattttctttgatcagct 54
             ||||||||||||||||||||||
Sbjct: 89102 caagtattttctttgatcagct 89123

>emb|CR735143.13| Zebrafish DNA sequence from clone CH211-244P16 in linkage group 5,
             complete sequence
          Length = 147626

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 1     tttttaaaaacacttacatttaaaaa 26
             |||||||||||| |||||||||||||
Sbjct: 77135 tttttaaaaacatttacatttaaaaa 77110

>emb|BX663519.12| Zebrafish DNA sequence from clone DKEY-182M1 in linkage group 15,
              complete sequence
          Length = 164720

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 1      tttttaaaaacacttacatttaaaaa 26
              |||||||||||||||| |||||||||
Sbjct: 132902 tttttaaaaacacttatatttaaaaa 132877

>emb|CR933780.12| Zebrafish DNA sequence from clone DKEY-60F6 in linkage group 5,
             complete sequence
          Length = 227454

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 1     tttttaaaaacacttacatttaaaaa 26
             |||||||||||| |||||||||||||
Sbjct: 75581 tttttaaaaacatttacatttaaaaa 75606

>gb|AC116412.19| Mus musculus chromosome 5, clone RP24-82A20, complete sequence
          Length = 191823

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 4      ttaaaaacacttacatttaaaaacc 28
              |||||||||||| ||||||||||||
Sbjct: 180554 ttaaaaacactttcatttaaaaacc 180578

>emb|CR376860.38| Zebrafish DNA sequence from clone DKEY-111H22 in linkage group 8,
             complete sequence
          Length = 195545

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 202   agtttatgtaaatctgtagct 222
             |||||||||||||||||||||
Sbjct: 32795 agtttatgtaaatctgtagct 32815

>emb|Z81115.1|CET05D4 Caenorhabditis elegans Cosmid T05D4, complete sequence
          Length = 32612

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 2    ttttaaaaacacttacatttaaaaa 26
            |||||||||||||||||||| ||||
Sbjct: 8796 ttttaaaaacacttacatttcaaaa 8820

>gb|AC004704.2|AC004704 Homo sapiens chromosome 4 clone B341C20 map 4q25, complete sequence
          Length = 134187

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 2     ttttaaaaacacttacattta 22
             |||||||||||||||||||||
Sbjct: 66228 ttttaaaaacacttacattta 66208

>emb|BX005011.6| Zebrafish DNA sequence from clone CH211-59F19 in linkage group 23,
              complete sequence
          Length = 178148

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 5      taaaaacacttacatttaaaa 25
              |||||||||||||||||||||
Sbjct: 141653 taaaaacacttacatttaaaa 141673

>gb|AC116763.11| Mus musculus chromosome 5, clone RP23-385G21, complete sequence
          Length = 196521

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 245    gggtttctttgggatcagaag 265
              |||||||||||||||||||||
Sbjct: 124530 gggtttctttgggatcagaag 124510

>gb|AC119269.9| Mus musculus chromosome 5, clone RP24-324B22, complete sequence
          Length = 172282

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 96    actttattgatataaagtag 115
             ||||||||||||||||||||
Sbjct: 10600 actttattgatataaagtag 10619

>gb|AC133087.3| Mus musculus BAC clone RP24-135I21 from chromosome 13, complete
             sequence
          Length = 157768

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 2     ttttaaaaacacttacatttaaaa 25
             |||||||||||||| |||||||||
Sbjct: 31854 ttttaaaaacactttcatttaaaa 31877

>gb|AC121774.3| Mus musculus BAC clone RP23-350E1 from chromosome 5, complete sequence
          Length = 191733

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 96     actttattgatataaagtag 115
              ||||||||||||||||||||
Sbjct: 148900 actttattgatataaagtag 148919

>gb|AC114822.7| Mus musculus BAC clone RP23-113A12 from 2, complete sequence
          Length = 209762

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 8      aaacacttacatttaaaaac 27
              ||||||||||||||||||||
Sbjct: 158295 aaacacttacatttaaaaac 158314

>gb|AC140914.20| Medicago truncatula clone mth2-18h17, complete sequence
          Length = 129792

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 8     aaacacttacatttaaaaac 27
             ||||||||||||||||||||
Sbjct: 25587 aaacacttacatttaaaaac 25568

>emb|AL590100.6| Human DNA sequence from clone RP11-49O3 on chromosome 13 Contains a CpG
             island, complete sequence
          Length = 43138

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 3     tttaaaaacacttacatttaaaaa 26
             ||||||| ||||||||||||||||
Sbjct: 27713 tttaaaatcacttacatttaaaaa 27690

>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence
          Length = 3806533

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 139    aactcacggccaatggccacaagg 162
              ||||| ||||||||||||||||||
Sbjct: 595040 aactcgcggccaatggccacaagg 595063

>gb|AC158752.5| Mus musculus chromosome 15, clone RP24-132H17, complete sequence
          Length = 159194

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 7     aaaacacttacatttaaaaa 26
             ||||||||||||||||||||
Sbjct: 72680 aaaacacttacatttaaaaa 72661

>emb|BX470081.7| Zebrafish DNA sequence from clone RP71-84P16, complete sequence
          Length = 84546

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 1     tttttaaaaacacttacatttaaa 24
             |||||||||||||| |||||||||
Sbjct: 40649 tttttaaaaacactaacatttaaa 40672

>gb|AC114322.2| Homo sapiens chromosome 5 clone RP11-74D3, complete sequence
          Length = 133348

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 55    cttaagaatttcctcaataa 74
             ||||||||||||||||||||
Sbjct: 22306 cttaagaatttcctcaataa 22287

>gb|AC114945.2| Homo sapiens chromosome 5 clone CTD-2604I2, complete sequence
          Length = 129575

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 55    cttaagaatttcctcaataa 74
             ||||||||||||||||||||
Sbjct: 13892 cttaagaatttcctcaataa 13911

>gb|AC022118.5| Homo sapiens chromosome 5 clone CTC-548H10, complete sequence
          Length = 104094

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 53    ctcttaagaatttcctcaat 72
             ||||||||||||||||||||
Sbjct: 77772 ctcttaagaatttcctcaat 77791

>gb|AC016623.6| Homo sapiens chromosome 5 clone CTD-2345N17, complete sequence
          Length = 153823

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 9     aacacttacatttaaaaacc 28
             ||||||||||||||||||||
Sbjct: 80024 aacacttacatttaaaaacc 80043

>emb|BX682556.5| Zebrafish DNA sequence from clone DKEY-105I19 in linkage group 3,
              complete sequence
          Length = 244555

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 1      tttttaaaaacacttacatttaaa 24
              |||||||||||||| |||||||||
Sbjct: 184556 tttttaaaaacactaacatttaaa 184579

>gb|AC004668.1| Homo sapiens BAC clone CTA-276O3 from 7, complete sequence
          Length = 112661

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 6     aaaaacacttacatttaaaa 25
             ||||||||||||||||||||
Sbjct: 25855 aaaaacacttacatttaaaa 25874

>gb|AC073536.5| Homo sapiens chromosome 5 clone CTD-2068E4, complete sequence
          Length = 116993

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 9     aacacttacatttaaaaacc 28
             ||||||||||||||||||||
Sbjct: 77079 aacacttacatttaaaaacc 77098

>emb|BX470215.5| Mouse DNA sequence from clone RP24-558L5 on chromosome X, complete
              sequence
          Length = 137502

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 69     caataacttttatcattttg 88
              ||||||||||||||||||||
Sbjct: 113547 caataacttttatcattttg 113566

>emb|AL136120.8| Human DNA sequence from clone RP5-975D15 on chromosome 1p31.3-32.2
             Contains the GADD45A gene for growth arrest and
             DNA-damage-inducible alpha, the 3' end of the GNG12 gene
             for guanine nucleotide binding protein (G protein) gamma
             12 and a CpG island, complete sequence
          Length = 104198

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 39    ttttctttgatcagctctta 58
             ||||||||||||||||||||
Sbjct: 81760 ttttctttgatcagctctta 81779

>emb|AL929043.7| Mouse DNA sequence from clone RP23-58H6 on chromosome 2, complete
             sequence
          Length = 164834

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 8     aaacacttacatttaaaaac 27
             ||||||||||||||||||||
Sbjct: 62307 aaacacttacatttaaaaac 62326


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,152,495
Number of Sequences: 3902068
Number of extensions: 3152495
Number of successful extensions: 62291
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 62223
Number of HSP's gapped (non-prelim): 68
length of query: 336
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 314
effective length of database: 17,147,199,772
effective search space: 5384220728408
effective search space used: 5384220728408
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)