ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal15n21
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY104861.1| Zea mays PCO082817 mRNA sequence 258 2e-65
2dbj|AK121753.1| Oryza sativa (japonica cultivar-group) cDNA clon... 250 4e-63
3dbj|AK104245.1| Oryza sativa (japonica cultivar-group) cDNA clon... 250 4e-63
4dbj|AK061354.1| Oryza sativa (japonica cultivar-group) cDNA clon... 242 1e-60
5gb|AC109596.3| Oryza sativa (japonica cultivar-group) chromosome... 176 5e-41
6dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 176 5e-41
7gb|AY112460.1| Zea mays CL9078_1 mRNA sequence 135 2e-28
8ref|NM_191117.1| Oryza sativa (japonica cultivar-group), predic... 115 2e-22
9dbj|AK121245.1| Oryza sativa (japonica cultivar-group) cDNA clon... 115 2e-22
10dbj|AK065226.1| Oryza sativa (japonica cultivar-group) cDNA clon... 115 2e-22
11dbj|AK062151.1| Oryza sativa (japonica cultivar-group) cDNA clon... 115 2e-22
12dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 107 4e-20
13dbj|AP003218.6| Oryza sativa (japonica cultivar-group) genomic D... 107 4e-20
14gb|BT018642.1| Zea mays clone EL01N0505A06.d mRNA sequence 62 2e-06
15ref|XM_507601.1| PREDICTED Oryza sativa (japonica cultivar-group... 50 0.008
16dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 50 0.008
17dbj|AP005439.3| Oryza sativa (japonica cultivar-group) genomic D... 50 0.008
18dbj|AP004464.3| Oryza sativa (japonica cultivar-group) genomic D... 50 0.008
19dbj|AK068776.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.008
20gb|AY103934.1| Zea mays PCO140136 mRNA sequence 48 0.030
21gb|AY110552.1| Zea mays CL33648_1 mRNA sequence 46 0.12
22gb|AC112514.1| Oryza sativa (japonica cultivar-group) chromosome... 44 0.46
23ref|XM_658649.1| Aspergillus nidulans FGSC A4 hypothetical prote... 44 0.46
24gb|AC092750.2| Oryza sativa (japonica cultivar-group) cultivar N... 44 0.46
25dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.46
26gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 44 0.46
27gb|AC134929.2| Oryza sativa (japonica cultivar-group) chromosome... 44 0.46
28ref|NM_123524.3| Arabidopsis thaliana unknown protein AT5G41600 ... 42 1.8
29gb|AC115933.7| Mus musculus chromosome 3, clone RP24-539I8, comp... 42 1.8
30gb|AC073054.2| Homo sapiens BAC clone RP11-106F1 from 7, complet... 42 1.8
31gb|AY150449.1| Arabidopsis thaliana unknown protein (At5g41600) ... 42 1.8
32gb|AY035169.1| Arabidopsis thaliana unknown protein (At5g41600) ... 42 1.8
33gb|AY057638.1| Arabidopsis thaliana AT5g41600/MBK23_13 mRNA, com... 42 1.8
34gb|AE010300.1| Leptospira interrogans serovar lai str. 56601 chr... 42 1.8
35dbj|AB005233.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 42 1.8
36gb|AE016823.1| Leptospira interrogans serovar Copenhageni str. F... 42 1.8
37ref|NM_130268.2| Arabidopsis thaliana ATPase, coupled to transme... 40 7.2
38gb|AC130601.2| Oryza sativa (japonica cultivar-group) chromosome... 40 7.2
39gb|AC108873.2| Oryza sativa (japonica cultivar-group) chromosome... 40 7.2
40gb|AY596554.1| Saccharum officinarum clone SCRFLR1012E12, comple... 40 7.2
41gb|BC063719.1| Xenopus laevis hypothetical protein MGC68665, mRN... 40 7.2
42gb|CP000300.1| Methanococcoides burtonii DSM 6242, complete genome 40 7.2
43gb|AC110607.7| Homo sapiens chromosome 15, clone CTD-2632K10, co... 40 7.2
44gb|AC138638.11| Mus musculus chromosome 8, clone RP23-380M21, co... 40 7.2
45gb|AC004411.3| Arabidopsis thaliana chromosome 2 clone F14M4 map... 40 7.2
46gb|AC002334.3| Arabidopsis thaliana chromosome 2 clone F25I18 ma... 40 7.2
47gb|AC079634.3|AC079634 Genomic Sequence for Oryza sativa, Nippon... 40 7.2
48gb|AE015928.1| Bacteroides thetaiotaomicron VPI-5482, complete g... 40 7.2
49dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.2
50dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.2
51dbj|AP003902.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.2
52dbj|AP003303.4| Oryza sativa (japonica cultivar-group) genomic D... 40 7.2
53dbj|AP003216.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.2
54dbj|AP003835.4| Oryza sativa (japonica cultivar-group) genomic D... 40 7.2
55dbj|AP004097.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.2
56emb|CT573421.5| M.truncatula DNA sequence from clone MTH2-27B10 ... 40 7.2
57gb|AC102210.6| Mus musculus chromosome 8, clone RP24-351F4, comp... 40 7.2 
>gb|AY104861.1| Zea mays PCO082817 mRNA sequence
          Length = 1190

 Score =  258 bits (130), Expect = 2e-65
 Identities = 241/278 (86%)
 Strand = Plus / Minus

                                                                       
Query: 246 ttctaatgctgcttcttgtccttggacggacccttgggaatcttggacaggcacttctca 305
           |||||||| ||||||||||| ||  | || ||||| |||||||| || ||||| ||||| 
Sbjct: 869 ttctaatgttgcttcttgtcttttaatgggcccttcggaatctttgataggcatttctcg 810

                                                                       
Query: 306 tcgaagatggcgtagtacttcttcagttcgaccatggccttctctccaaaagcatcaatc 365
           |||||||||||||||||| ||||||| ||||||||||||||||| ||||||||||||| |
Sbjct: 809 tcgaagatggcgtagtacctcttcagctcgaccatggccttctcaccaaaagcatcaacc 750

                                                                       
Query: 366 ttgtcctcatacttctcgtacaggacaggcacggtgtagagtaccatgaagactatgtag 425
           || |||||||  ||||| |||||||| || || ||||| |||||||| || |||||||| 
Sbjct: 749 ttatcctcatgtttctcatacaggaccggtacagtgtacagtaccataaaaactatgtaa 690

                                                                       
Query: 426 aacaaggtgaggaaattgcaggagctgccaagagcagagaggatccacaggcctgcaacc 485
            |||||||||||||||||||| |||| |||||| |||| ||||||||||| ||||||| |
Sbjct: 689 gacaaggtgaggaaattgcagcagctcccaagaacagaaaggatccacagtcctgcaatc 630

                                                 
Query: 486 acaatcaggaatttcttcaggtcgcggccttggccaat 523
           |||||||| |||||||| |||||  |||||||||||||
Sbjct: 629 acaatcagaaatttcttgaggtcatggccttggccaat 592
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>dbj|AK121753.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033087P17, full
           insert sequence
          Length = 1106

 Score =  250 bits (126), Expect = 4e-63
 Identities = 210/238 (88%)
 Strand = Plus / Minus

                                                                       
Query: 271 acggacccttgggaatcttggacaggcacttctcatcgaagatggcgtagtacttcttca 330
           ||||||||||||| ||||| || ||||| ||||||||||| || || |||||||||||||
Sbjct: 801 acggacccttggggatcttagagaggcatttctcatcgaaaatagcatagtacttcttca 742

                                                                       
Query: 331 gttcgaccatggccttctctccaaaagcatcaatcttgtcctcatacttctcgtacagga 390
           |||||| |||||||||||||||||||||||| || | ||||||||||||||| ||||| |
Sbjct: 741 gttcgatcatggccttctctccaaaagcatcgatttggtcctcatacttctcatacagaa 682

                                                                       
Query: 391 caggcacggtgtagagtaccatgaagactatgtagaacaaggtgaggaaattgcaggagc 450
           ||||||||||||| |||||||| |||||||||||||||||||| |||||||||||| |||
Sbjct: 681 caggcacggtgtacagtaccataaagactatgtagaacaaggtcaggaaattgcagcagc 622

                                                                     
Query: 451 tgccaagagcagagaggatccacaggcctgcaaccacaatcaggaatttcttcaggtc 508
           | |||||| ||||||| | ||| || ||  | || |||||||| ||||||||||||||
Sbjct: 621 tcccaagaacagagagaacccagagacccacgacaacaatcagaaatttcttcaggtc 564
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>dbj|AK104245.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-308-D08, full
           insert sequence
          Length = 1039

 Score =  250 bits (126), Expect = 4e-63
 Identities = 210/238 (88%)
 Strand = Plus / Minus

                                                                       
Query: 271 acggacccttgggaatcttggacaggcacttctcatcgaagatggcgtagtacttcttca 330
           ||||||||||||| ||||| || ||||| ||||||||||| || || |||||||||||||
Sbjct: 818 acggacccttggggatcttagagaggcatttctcatcgaaaatagcatagtacttcttca 759

                                                                       
Query: 331 gttcgaccatggccttctctccaaaagcatcaatcttgtcctcatacttctcgtacagga 390
           |||||| |||||||||||||||||||||||| || | ||||||||||||||| ||||| |
Sbjct: 758 gttcgatcatggccttctctccaaaagcatcgatttggtcctcatacttctcatacagaa 699

                                                                       
Query: 391 caggcacggtgtagagtaccatgaagactatgtagaacaaggtgaggaaattgcaggagc 450
           ||||||||||||| |||||||| |||||||||||||||||||| |||||||||||| |||
Sbjct: 698 caggcacggtgtacagtaccataaagactatgtagaacaaggtcaggaaattgcagcagc 639

                                                                     
Query: 451 tgccaagagcagagaggatccacaggcctgcaaccacaatcaggaatttcttcaggtc 508
           | |||||| ||||||| | ||| || ||  | || |||||||| ||||||||||||||
Sbjct: 638 tcccaagaacagagagaacccagagacccacgacaacaatcagaaatttcttcaggtc 581
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>dbj|AK061354.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-303-G11, full
           insert sequence
          Length = 1138

 Score =  242 bits (122), Expect = 1e-60
 Identities = 209/238 (87%)
 Strand = Plus / Minus

                                                                       
Query: 271 acggacccttgggaatcttggacaggcacttctcatcgaagatggcgtagtacttcttca 330
           ||||||||| ||| ||||| || ||||| ||||||||||| || || |||||||||||||
Sbjct: 843 acggaccctcggggatcttagagaggcatttctcatcgaaaatagcatagtacttcttca 784

                                                                       
Query: 331 gttcgaccatggccttctctccaaaagcatcaatcttgtcctcatacttctcgtacagga 390
           |||||| |||||||||||||||||||||||| || | ||||||||||||||| ||||| |
Sbjct: 783 gttcgatcatggccttctctccaaaagcatcgatttggtcctcatacttctcatacagaa 724

                                                                       
Query: 391 caggcacggtgtagagtaccatgaagactatgtagaacaaggtgaggaaattgcaggagc 450
           ||||||||||||| |||||||| |||||||||||||||||||| |||||||||||| |||
Sbjct: 723 caggcacggtgtacagtaccataaagactatgtagaacaaggtcaggaaattgcagcagc 664

                                                                     
Query: 451 tgccaagagcagagaggatccacaggcctgcaaccacaatcaggaatttcttcaggtc 508
           | |||||| ||||||| | ||| || ||  | || |||||||| ||||||||||||||
Sbjct: 663 tcccaagaacagagagaacccagagacccacgacaacaatcagaaatttcttcaggtc 606
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>gb|AC109596.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1593_C11,
             complete sequence
          Length = 112065

 Score =  176 bits (89), Expect = 5e-41
 Identities = 134/149 (89%)
 Strand = Plus / Plus

                                                                         
Query: 271   acggacccttgggaatcttggacaggcacttctcatcgaagatggcgtagtacttcttca 330
             ||||||||||||| ||||| || ||||| ||||||||||| || || |||||||||||||
Sbjct: 76782 acggacccttggggatcttagagaggcatttctcatcgaaaatagcatagtacttcttca 76841

                                                                         
Query: 331   gttcgaccatggccttctctccaaaagcatcaatcttgtcctcatacttctcgtacagga 390
             |||||| |||||||||||||||||||||||| || | ||||||||||||||| ||||| |
Sbjct: 76842 gttcgatcatggccttctctccaaaagcatcgatttggtcctcatacttctcatacagaa 76901

                                          
Query: 391   caggcacggtgtagagtaccatgaagact 419
             ||||||||||||| |||||||| ||||||
Sbjct: 76902 caggcacggtgtacagtaccataaagact 76930



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 45/49 (91%)
 Strand = Plus / Plus

                                                              
Query: 418   ctatgtagaacaaggtgaggaaattgcaggagctgccaagagcagagag 466
             |||||||||||||||| |||||||||||| |||| |||||| |||||||
Sbjct: 77005 ctatgtagaacaaggtcaggaaattgcagcagctcccaagaacagagag 77053
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score =  176 bits (89), Expect = 5e-41
 Identities = 134/149 (89%)
 Strand = Plus / Plus

                                                                            
Query: 271      acggacccttgggaatcttggacaggcacttctcatcgaagatggcgtagtacttcttca 330
                ||||||||||||| ||||| || ||||| ||||||||||| || || |||||||||||||
Sbjct: 25973655 acggacccttggggatcttagagaggcatttctcatcgaaaatagcatagtacttcttca 25973714

                                                                            
Query: 331      gttcgaccatggccttctctccaaaagcatcaatcttgtcctcatacttctcgtacagga 390
                |||||| |||||||||||||||||||||||| || | ||||||||||||||| ||||| |
Sbjct: 25973715 gttcgatcatggccttctctccaaaagcatcgatttggtcctcatacttctcatacagaa 25973774

                                             
Query: 391      caggcacggtgtagagtaccatgaagact 419
                ||||||||||||| |||||||| ||||||
Sbjct: 25973775 caggcacggtgtacagtaccataaagact 25973803



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 45/49 (91%)
 Strand = Plus / Plus

                                                                 
Query: 418      ctatgtagaacaaggtgaggaaattgcaggagctgccaagagcagagag 466
                |||||||||||||||| |||||||||||| |||| |||||| |||||||
Sbjct: 25973878 ctatgtagaacaaggtcaggaaattgcagcagctcccaagaacagagag 25973926



 Score = 44.1 bits (22), Expect = 0.46
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 163      aatcacaagttcacaaccatcc 184
                ||||||||||||||||||||||
Sbjct: 28830076 aatcacaagttcacaaccatcc 28830055



 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 164      atcacaagttcacaaccatc 183
                ||||||||||||||||||||
Sbjct: 25063676 atcacaagttcacaaccatc 25063695
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>gb|AY112460.1| Zea mays CL9078_1 mRNA sequence
          Length = 686

 Score =  135 bits (68), Expect = 2e-28
 Identities = 203/248 (81%)
 Strand = Plus / Plus

                                                                       
Query: 276 cccttgggaatcttggacaggcacttctcatcgaagatggcgtagtacttcttcagttcg 335
           ||||| |||||||| || ||||||||||||||||| ||||| || |||||||||||||| 
Sbjct: 343 ccctttggaatcttcgataggcacttctcatcgaaaatggcataatacttcttcagttca 402

                                                                       
Query: 336 accatggccttctctccaaaagcatcaatcttgtcctcatacttctcgtacaggacaggc 395
             ||| |||||||| ||||||||||||| |||||||||||| ||||| ||||| || || 
Sbjct: 403 gtcatagccttctcaccaaaagcatcaaccttgtcctcatatttctcatacagaactggt 462

                                                                       
Query: 396 acggtgtagagtaccatgaagactatgtagaacaaggtgaggaaattgcaggagctgcca 455
           || ||||| ||| |||  ||||| || |||||||  || ||||| |||||| |||| || 
Sbjct: 463 acagtgtacagtgccacaaagacaatatagaacagtgtcaggaagttgcagcagctcccg 522

                                                                       
Query: 456 agagcagagaggatccacaggcctgcaaccacaatcaggaatttcttcaggtcgcggcct 515
           ||| | || || | ||| || |||||||  ||||| |||||||||||||| || ||||| 
Sbjct: 523 agaactgaaagaagccagagacctgcaataacaattaggaatttcttcagatcacggcca 582

                   
Query: 516 tggccaat 523
           || |||||
Sbjct: 583 tgcccaat 590
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>ref|NM_191117.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 762

 Score =  115 bits (58), Expect = 2e-22
 Identities = 133/158 (84%)
 Strand = Plus / Minus

                                                                       
Query: 273 ggacccttgggaatcttggacaggcacttctcatcgaagatggcgtagtacttcttcagt 332
           ||||||||||||||||| || ||||| ||||| || |||| ||| ||||||||||| | |
Sbjct: 740 ggacccttgggaatcttcgataggcatttctcttcaaagagggcatagtacttcttaaat 681

                                                                       
Query: 333 tcgaccatggccttctctccaaaagcatcaatcttgtcctcatacttctcgtacaggaca 392
           || | |   |||||||| ||||||||||||| |||||||||||||||||| ||||| || 
Sbjct: 680 tcaatctcagccttctcaccaaaagcatcaaccttgtcctcatacttctcatacagtact 621

                                                 
Query: 393 ggcacggtgtagagtaccatgaagactatgtagaacaa 430
           ||||| ||||||||  |||  || ||||||||||||||
Sbjct: 620 ggcacagtgtagagcgccacaaaaactatgtagaacaa 583
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>dbj|AK121245.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023099G09, full
           insert sequence
          Length = 1325

 Score =  115 bits (58), Expect = 2e-22
 Identities = 133/158 (84%)
 Strand = Plus / Minus

                                                                       
Query: 273 ggacccttgggaatcttggacaggcacttctcatcgaagatggcgtagtacttcttcagt 332
           ||||||||||||||||| || ||||| ||||| || |||| ||| ||||||||||| | |
Sbjct: 874 ggacccttgggaatcttcgataggcatttctcttcaaagagggcatagtacttcttaaat 815

                                                                       
Query: 333 tcgaccatggccttctctccaaaagcatcaatcttgtcctcatacttctcgtacaggaca 392
           || | |   |||||||| ||||||||||||| |||||||||||||||||| ||||| || 
Sbjct: 814 tcaatctcagccttctcaccaaaagcatcaaccttgtcctcatacttctcatacagtact 755

                                                 
Query: 393 ggcacggtgtagagtaccatgaagactatgtagaacaa 430
           ||||| ||||||||  |||  || ||||||||||||||
Sbjct: 754 ggcacagtgtagagcgccacaaaaactatgtagaacaa 717
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>dbj|AK065226.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002H02, full
           insert sequence
          Length = 1181

 Score =  115 bits (58), Expect = 2e-22
 Identities = 133/158 (84%)
 Strand = Plus / Minus

                                                                       
Query: 273 ggacccttgggaatcttggacaggcacttctcatcgaagatggcgtagtacttcttcagt 332
           ||||||||||||||||| || ||||| ||||| || |||| ||| ||||||||||| | |
Sbjct: 865 ggacccttgggaatcttcgataggcatttctcttcaaagagggcatagtacttcttaaat 806

                                                                       
Query: 333 tcgaccatggccttctctccaaaagcatcaatcttgtcctcatacttctcgtacaggaca 392
           || | |   |||||||| ||||||||||||| |||||||||||||||||| ||||| || 
Sbjct: 805 tcaatctcagccttctcaccaaaagcatcaaccttgtcctcatacttctcatacagtact 746

                                                 
Query: 393 ggcacggtgtagagtaccatgaagactatgtagaacaa 430
           ||||| ||||||||  |||  || ||||||||||||||
Sbjct: 745 ggcacagtgtagagcgccacaaaaactatgtagaacaa 708
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>dbj|AK062151.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-045-H05, full
           insert sequence
          Length = 731

 Score =  115 bits (58), Expect = 2e-22
 Identities = 133/158 (84%)
 Strand = Plus / Minus

                                                                       
Query: 273 ggacccttgggaatcttggacaggcacttctcatcgaagatggcgtagtacttcttcagt 332
           ||||||||||||||||| || ||||| ||||| || |||| ||| ||||||||||| | |
Sbjct: 385 ggacccttgggaatcttcgataggcatttctcttcaaagagggcatagtacttcttaaat 326

                                                                       
Query: 333 tcgaccatggccttctctccaaaagcatcaatcttgtcctcatacttctcgtacaggaca 392
           || | |   |||||||| ||||||||||||| |||||||||||||||||| ||||| || 
Sbjct: 325 tcaatctcagccttctcaccaaaagcatcaaccttgtcctcatacttctcatacagtact 266

                                                 
Query: 393 ggcacggtgtagagtaccatgaagactatgtagaacaa 430
           ||||| ||||||||  |||  || ||||||||||||||
Sbjct: 265 ggcacagtgtagagcgccacaaaaactatgtagaacaa 228
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  107 bits (54), Expect = 4e-20
 Identities = 114/134 (85%)
 Strand = Plus / Minus

                                                                            
Query: 273      ggacccttgggaatcttggacaggcacttctcatcgaagatggcgtagtacttcttcagt 332
                ||||||||||||||||| || ||||| ||||| || |||| ||| ||||||||||| | |
Sbjct: 30733527 ggacccttgggaatcttcgataggcatttctcttcaaagagggcatagtacttcttaaat 30733468

                                                                            
Query: 333      tcgaccatggccttctctccaaaagcatcaatcttgtcctcatacttctcgtacaggaca 392
                || | |   |||||||| ||||||||||||| |||||||||||||||||| ||||| || 
Sbjct: 30733467 tcaatctcagccttctcaccaaaagcatcaaccttgtcctcatacttctcatacagtact 30733408

                              
Query: 393      ggcacggtgtagag 406
                ||||| ||||||||
Sbjct: 30733407 ggcacagtgtagag 30733394



 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 164      atcacaagttcacaaccatc 183
                ||||||||||||||||||||
Sbjct: 23932590 atcacaagttcacaaccatc 23932571



 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 163      aatcacaagttcacaaccat 182
                ||||||||||||||||||||
Sbjct: 20903311 aatcacaagttcacaaccat 20903330
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>dbj|AP003218.6| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OSJNBb0021A09
          Length = 127973

 Score =  107 bits (54), Expect = 4e-20
 Identities = 114/134 (85%)
 Strand = Plus / Minus

                                                                         
Query: 273   ggacccttgggaatcttggacaggcacttctcatcgaagatggcgtagtacttcttcagt 332
             ||||||||||||||||| || ||||| ||||| || |||| ||| ||||||||||| | |
Sbjct: 22802 ggacccttgggaatcttcgataggcatttctcttcaaagagggcatagtacttcttaaat 22743

                                                                         
Query: 333   tcgaccatggccttctctccaaaagcatcaatcttgtcctcatacttctcgtacaggaca 392
             || | |   |||||||| ||||||||||||| |||||||||||||||||| ||||| || 
Sbjct: 22742 tcaatctcagccttctcaccaaaagcatcaaccttgtcctcatacttctcatacagtact 22683

                           
Query: 393   ggcacggtgtagag 406
             ||||| ||||||||
Sbjct: 22682 ggcacagtgtagag 22669
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>gb|BT018642.1| Zea mays clone EL01N0505A06.d mRNA sequence
          Length = 1634

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 61/71 (85%)
 Strand = Plus / Minus

                                                                       
Query: 417 actatgtagaacaaggtgaggaaattgcaggagctgccaagagcagagaggatccacagg 476
           ||||||||  |||||||||| ||||||||| |||| ||| |  |||| ||||||||||| 
Sbjct: 339 actatgtaagacaaggtgagaaaattgcagcagctcccatggacagaaaggatccacagt 280

                      
Query: 477 cctgcaaccac 487
           |||||||||||
Sbjct: 279 cctgcaaccac 269
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>ref|XM_507601.1| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBa0033D24.25
            mRNA
          Length = 1524

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                     
Query: 21   tattacaccaacacaacttgcaagt 45
            |||||||||||||||||||||||||
Sbjct: 1462 tattacaccaacacaacttgcaagt 1438
to top
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                         
Query: 21       tattacaccaacacaacttgcaagt 45
                |||||||||||||||||||||||||
Sbjct: 26763031 tattacaccaacacaacttgcaagt 26763007
to top
>dbj|AP005439.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OSJNBa0033D24
          Length = 186132

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                       
Query: 21     tattacaccaacacaacttgcaagt 45
              |||||||||||||||||||||||||
Sbjct: 106373 tattacaccaacacaacttgcaagt 106349
to top
>dbj|AP004464.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0665C04
          Length = 177054

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                      
Query: 21    tattacaccaacacaacttgcaagt 45
             |||||||||||||||||||||||||
Sbjct: 25821 tattacaccaacacaacttgcaagt 25797
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>dbj|AK068776.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013160K11, full
            insert sequence
          Length = 1524

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                     
Query: 21   tattacaccaacacaacttgcaagt 45
            |||||||||||||||||||||||||
Sbjct: 1462 tattacaccaacacaacttgcaagt 1438
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>gb|AY103934.1| Zea mays PCO140136 mRNA sequence
          Length = 1116

 Score = 48.1 bits (24), Expect = 0.030
 Identities = 84/104 (80%)
 Strand = Plus / Minus

                                                                       
Query: 360 tcaatcttgtcctcatacttctcgtacaggacaggcacggtgtagagtaccatgaagact 419
           |||||||  ||||| |||||||||||||||||||| || ||||  || ||||  ||||| 
Sbjct: 797 tcaatctgatcctcgtacttctcgtacaggacaggtactgtgtgcagcaccacaaagaca 738

                                                       
Query: 420 atgtagaacaaggtgaggaaattgcaggagctgccaagagcaga 463
           ||||| |  ||||| | ||| |||||| |||| |||||| ||||
Sbjct: 737 atgtaaactaaggtcaagaagttgcagcagcttccaagaacaga 694
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>gb|AY110552.1| Zea mays CL33648_1 mRNA sequence
          Length = 681

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 50/59 (84%)
 Strand = Plus / Plus

                                                                      
Query: 417 actatgtagaacaaggtgaggaaattgcaggagctgccaagagcagagaggatccacag 475
           ||||||||  |||||||||| ||||||||| |||| ||| |  |||| |||||||||||
Sbjct: 330 actatgtaagacaaggtgagaaaattgcagcagctcccatggacagaaaggatccacag 388
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>gb|AC112514.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone
             OSJNAb0023M11, complete sequence
          Length = 120228

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 161   ggaatcacaagttcacaaccat 182
             ||||||||||||||||||||||
Sbjct: 78627 ggaatcacaagttcacaaccat 78648
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>ref|XM_658649.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN6137.2), mRNA
          Length = 2346

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                          
Query: 213  tgaagataaatctgcgcagggtaatctcta 242
            ||||||| |||||||||| |||||||||||
Sbjct: 2316 tgaagatcaatctgcgcaaggtaatctcta 2345
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>gb|AC092750.2| Oryza sativa (japonica cultivar-group) cultivar Nipponbare from
             chromosome 10, complete sequence
          Length = 134933

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 161   ggaatcacaagttcacaaccat 182
             ||||||||||||||||||||||
Sbjct: 18399 ggaatcacaagttcacaaccat 18420
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                      
Query: 161      ggaatcacaagttcacaaccat 182
                ||||||||||||||||||||||
Sbjct: 10237074 ggaatcacaagttcacaaccat 10237095



 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 162     gaatcacaagttcacaacca 181
               ||||||||||||||||||||
Sbjct: 9787346 gaatcacaagttcacaacca 9787327
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                      
Query: 161      ggaatcacaagttcacaaccat 182
                ||||||||||||||||||||||
Sbjct: 10243113 ggaatcacaagttcacaaccat 10243134



 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 162     gaatcacaagttcacaacca 181
               ||||||||||||||||||||
Sbjct: 9793385 gaatcacaagttcacaacca 9793366
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>gb|AC134929.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBb0035N21, complete sequence
          Length = 128331

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 163   aatcacaagttcacaaccatcc 184
             ||||||||||||||||||||||
Sbjct: 43391 aatcacaagttcacaaccatcc 43412
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>ref|NM_123524.3| Arabidopsis thaliana unknown protein AT5G41600 mRNA, complete cds
          Length = 1095

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 366 ttgtcctcatacttctcgtacaggacagg 394
           |||||||||||||||||||| || |||||
Sbjct: 747 ttgtcctcatacttctcgtagagtacagg 719
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>gb|AC115933.7| Mus musculus chromosome 3, clone RP24-539I8, complete sequence
          Length = 187920

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 244   tgttctaatgctgcttcttgt 264
             |||||||||||||||||||||
Sbjct: 82976 tgttctaatgctgcttcttgt 82956
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>gb|AC073054.2| Homo sapiens BAC clone RP11-106F1 from 7, complete sequence
          Length = 154419

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 239   tctactgttctaatgctgcttcttg 263
             |||||||||||||| ||||||||||
Sbjct: 84467 tctactgttctaattctgcttcttg 84491
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>gb|AY150449.1| Arabidopsis thaliana unknown protein (At5g41600) mRNA, complete cds
          Length = 805

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 366 ttgtcctcatacttctcgtacaggacagg 394
           |||||||||||||||||||| || |||||
Sbjct: 647 ttgtcctcatacttctcgtagagtacagg 619
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>gb|AY035169.1| Arabidopsis thaliana unknown protein (At5g41600) mRNA, complete cds
          Length = 1061

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 366 ttgtcctcatacttctcgtacaggacagg 394
           |||||||||||||||||||| || |||||
Sbjct: 701 ttgtcctcatacttctcgtagagtacagg 673
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>gb|AY057638.1| Arabidopsis thaliana AT5g41600/MBK23_13 mRNA, complete cds
          Length = 1103

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 366 ttgtcctcatacttctcgtacaggacagg 394
           |||||||||||||||||||| || |||||
Sbjct: 747 ttgtcctcatacttctcgtagagtacagg 719
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>gb|AE010300.1| Leptospira interrogans serovar lai str. 56601 chromosome I, complete
               sequence
          Length = 4332241

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 350     tccaaaagcatcaatcttgtc 370
               |||||||||||||||||||||
Sbjct: 2376527 tccaaaagcatcaatcttgtc 2376547
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>dbj|AB005233.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MBK23
          Length = 79837

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 366   ttgtcctcatacttctcgtacaggacagg 394
             |||||||||||||||||||| || |||||
Sbjct: 32300 ttgtcctcatacttctcgtagagtacagg 32272
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>gb|AE016823.1| Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130, chromosome
               I, complete sequence
          Length = 4277185

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 350     tccaaaagcatcaatcttgtc 370
               |||||||||||||||||||||
Sbjct: 1904909 tccaaaagcatcaatcttgtc 1904889
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>ref|NM_130268.2| Arabidopsis thaliana ATPase, coupled to transmembrane movement of
           substances AT2G47000 mRNA, complete cds
          Length = 4001

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 345 ttctctccaaaagcatcaat 364
           ||||||||||||||||||||
Sbjct: 281 ttctctccaaaagcatcaat 262
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>gb|AC130601.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0108E17,
              complete sequence
          Length = 139829

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 164    atcacaagttcacaaccatc 183
              ||||||||||||||||||||
Sbjct: 132529 atcacaagttcacaaccatc 132548
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>gb|AC108873.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1005_B11,
            complete sequence
          Length = 162772

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 164  atcacaagttcacaaccatc 183
            ||||||||||||||||||||
Sbjct: 6331 atcacaagttcacaaccatc 6350
to top
>gb|AY596554.1| Saccharum officinarum clone SCRFLR1012E12, complete sequence
          Length = 1197

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 83/104 (79%)
 Strand = Plus / Plus

                                                                       
Query: 360 tcaatcttgtcctcatacttctcgtacaggacaggcacggtgtagagtaccatgaagact 419
           |||||||  ||||| |||||||| ||||||||||| || ||||  || ||||  ||||| 
Sbjct: 423 tcaatctgatcctcgtacttctcatacaggacaggtactgtgtgcagcaccacaaagaca 482

                                                       
Query: 420 atgtagaacaaggtgaggaaattgcaggagctgccaagagcaga 463
           ||||| | |||||  | ||| |||||| |||| |||||| ||||
Sbjct: 483 atgtaaaccaaggacaagaagttgcagcagcttccaagaacaga 526
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>gb|BC063719.1| Xenopus laevis hypothetical protein MGC68665, mRNA (cDNA clone
            MGC:68665 IMAGE:4032810), complete cds
          Length = 6579

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 203  tgatcaactttgaagataaa 222
            ||||||||||||||||||||
Sbjct: 5558 tgatcaactttgaagataaa 5539
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>gb|CP000300.1| Methanococcoides burtonii DSM 6242, complete genome
          Length = 2575032

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 229     cagggtaatctctactgttc 248
               ||||||||||||||||||||
Sbjct: 1171459 cagggtaatctctactgttc 1171478
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>gb|AC110607.7| Homo sapiens chromosome 15, clone CTD-2632K10, complete sequence
          Length = 160452

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 448   agctgccaagagcagagagg 467
             ||||||||||||||||||||
Sbjct: 53624 agctgccaagagcagagagg 53643
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>gb|AC138638.11| Mus musculus chromosome 8, clone RP23-380M21, complete sequence
          Length = 168821

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 156 gacatggaatcacaagttca 175
           ||||||||||||||||||||
Sbjct: 597 gacatggaatcacaagttca 578
to top
>gb|AC004411.3| Arabidopsis thaliana chromosome 2 clone F14M4 map CIC06C03, complete
             sequence
          Length = 106329

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 345   ttctctccaaaagcatcaat 364
             ||||||||||||||||||||
Sbjct: 45109 ttctctccaaaagcatcaat 45090
to top
>gb|AC002334.3| Arabidopsis thaliana chromosome 2 clone F25I18 map TEn5, complete
             sequence
          Length = 93158

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 164   atcacaagttcacaaccatc 183
             ||||||||||||||||||||
Sbjct: 30966 atcacaagttcacaaccatc 30947
to top
>gb|AC079634.3|AC079634 Genomic Sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBa0045C13, from Chromosome 10, complete sequence
          Length = 161250

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 162   gaatcacaagttcacaacca 181
             ||||||||||||||||||||
Sbjct: 19825 gaatcacaagttcacaacca 19806
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>gb|AE015928.1| Bacteroides thetaiotaomicron VPI-5482, complete genome
          Length = 6260361

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 411     atgaagactatgtagaacaa 430
               ||||||||||||||||||||
Sbjct: 2317446 atgaagactatgtagaacaa 2317427
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 161     ggaatcacaagttcacaacc 180
               ||||||||||||||||||||
Sbjct: 4386047 ggaatcacaagttcacaacc 4386028
to top
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 164      atcacaagttcacaaccatc 183
                ||||||||||||||||||||
Sbjct: 24407528 atcacaagttcacaaccatc 24407547
to top
>dbj|AP003902.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:B1110C07
          Length = 173859

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 163    aatcacaagttcacaaccat 182
              ||||||||||||||||||||
Sbjct: 121753 aatcacaagttcacaaccat 121772
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>dbj|AP003303.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0704D04
          Length = 147638

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 164   atcacaagttcacaaccatc 183
             ||||||||||||||||||||
Sbjct: 78994 atcacaagttcacaaccatc 78975
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>dbj|AP003216.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OSJNBa0090K04
          Length = 152556

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 164   atcacaagttcacaaccatc 183
             ||||||||||||||||||||
Sbjct: 47112 atcacaagttcacaaccatc 47093
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>dbj|AP003835.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1506_G02
          Length = 106742

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 161   ggaatcacaagttcacaacc 180
             ||||||||||||||||||||
Sbjct: 25896 ggaatcacaagttcacaacc 25877
to top
>dbj|AP004097.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1792_D02
          Length = 141649

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 164   atcacaagttcacaaccatc 183
             ||||||||||||||||||||
Sbjct: 35734 atcacaagttcacaaccatc 35753
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>emb|CT573421.5| M.truncatula DNA sequence from clone MTH2-27B10 on chromosome 3, complete
              sequence
          Length = 123669

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 433    tgaggaaattgcaggagctg 452
              ||||||||||||||||||||
Sbjct: 113133 tgaggaaattgcaggagctg 113152
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>gb|AC102210.6| Mus musculus chromosome 8, clone RP24-351F4, complete sequence
          Length = 165443

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 156   gacatggaatcacaagttca 175
             ||||||||||||||||||||
Sbjct: 78941 gacatggaatcacaagttca 78960


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,162,114
Number of Sequences: 3902068
Number of extensions: 4162114
Number of successful extensions: 80918
Number of sequences better than 10.0: 57
Number of HSP's better than 10.0 without gapping: 60
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 80543
Number of HSP's gapped (non-prelim): 366
length of query: 535
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 512
effective length of database: 17,143,297,704
effective search space: 8777368424448
effective search space used: 8777368424448
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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