ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal15n20
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1JI23_HORVU (P32024) 23 kDa jasmonate-induced protein 236 3e-62
2VL1_HPV62 (P50823) Major capsid protein L1 30 5.7
3AMYB_PAEPO (P21543) Beta/alpha-amylase precursor [Includes: Beta... 30 5.7
4NTP1_CFEPV (O91729) Nucleoside triphosphatase I (EC 3.6.1.15) (N... 30 5.7
5AMYB_BACFI (P96513) Beta-amylase precursor (EC 3.2.1.2) (1,4-alp... 30 5.7
6ZAPA_PROMI (Q11137) Extracellular metalloprotease precursor (EC ... 30 5.7
7NTP1_CBEPV (P24486) Nucleoside triphosphatase I (EC 3.6.1.15) (N... 30 5.7
8ENV_HV2RO (P04577) Envelope polyprotein GP160 precursor [Contain... 30 7.4
9Y018_METJA (Q60324) Hypothetical protein MJ0018 30 7.4
10GP152_MOUSE (Q8BXS7) Probable G-protein coupled receptor 152 30 7.4
11ZN335_HUMAN (Q9H4Z2) Zinc finger protein 335 30 7.4

>JI23_HORVU (P32024) 23 kDa jasmonate-induced protein|
          Length = 210

 Score =  236 bits (603), Expect = 3e-62
 Identities = 110/123 (89%), Positives = 110/123 (89%)
 Frame = -2

Query: 617 IYDTPYPSDIQNGQWGAFLHVHPXXXXXXXXXAVVYRSKIPXXXXSCDWLFSWTVPYIGG 438
           IYDTPYPSDIQNGQWGAFLHVHP         AVVYRSKIP    SCDWLFSWTVPYIGG
Sbjct: 88  IYDTPYPSDIQNGQWGAFLHVHPSGAAAGSAGAVVYRSKIPSSSSSCDWLFSWTVPYIGG 147

Query: 437 NGVYTEIREEGHYPSVGSWDYIYNVKLKNSSVTSIDSNYGYVSKADIGEGTTMNARGVFE 258
           NGVYTEIREEGHYPSVGSWDYIYNVKLKNSSVTSIDSNYGYVSKADIGEGTTMNARGVFE
Sbjct: 148 NGVYTEIREEGHYPSVGSWDYIYNVKLKNSSVTSIDSNYGYVSKADIGEGTTMNARGVFE 207

Query: 257 FPY 249
           FPY
Sbjct: 208 FPY 210



to top

>VL1_HPV62 (P50823) Major capsid protein L1|
          Length = 503

 Score = 30.0 bits (66), Expect = 5.7
 Identities = 19/57 (33%), Positives = 27/57 (47%)
 Frame = +2

Query: 68  NKIQLHGTSLWSPSSFAYSWIIRSIKMHHKDSKEKNYTSVHGRHTRLEDHNNNSLLA 238
           NK  L   +L++P +    W  R I++          TS H  + RL+D  N SLLA
Sbjct: 81  NKFTLPDATLYNPDTERMVWACRGIEVGRGQPLGVG-TSGHPLYNRLDDTENTSLLA 136



to top

>AMYB_PAEPO (P21543) Beta/alpha-amylase precursor [Includes: Beta-amylase (EC|
           3.2.1.2); Alpha-amylase (EC 3.2.1.1)]
          Length = 1196

 Score = 30.0 bits (66), Expect = 5.7
 Identities = 19/66 (28%), Positives = 31/66 (46%), Gaps = 7/66 (10%)
 Frame = -2

Query: 449 YIGGNGVYTEIREEGHYPSVGSWDY-------IYNVKLKNSSVTSIDSNYGYVSKADIGE 291
           Y+ G G   E+R   +YP+ G W Y        Y    KN+  T+++  YG + K +   
Sbjct: 190 YLSG-GPSGELRYPSYYPAAG-WSYPGRGKFQAYTETAKNAFRTAMNDKYGSLDKINAAW 247

Query: 290 GTTMNA 273
           GT + +
Sbjct: 248 GTKLTS 253



to top

>NTP1_CFEPV (O91729) Nucleoside triphosphatase I (EC 3.6.1.15) (Nucleoside|
           triphosphate phosphohydrolase I) (NPH I)
          Length = 647

 Score = 30.0 bits (66), Expect = 5.7
 Identities = 14/47 (29%), Positives = 28/47 (59%)
 Frame = +2

Query: 128 IIRSIKMHHKDSKEKNYTSVHGRHTRLEDHNNNSLLATRSSRETRKL 268
           I RS+K   KD+ E+N+T ++ +  +L ++ NN +L   ++  T  +
Sbjct: 156 ISRSVK---KDNSERNFTPIYRKLIKLANYENNKILCMSATPITNNI 199



to top

>AMYB_BACFI (P96513) Beta-amylase precursor (EC 3.2.1.2) (1,4-alpha-D-glucan|
           maltohydrolase) (Fragment)
          Length = 468

 Score = 30.0 bits (66), Expect = 5.7
 Identities = 19/66 (28%), Positives = 31/66 (46%), Gaps = 7/66 (10%)
 Frame = -2

Query: 449 YIGGNGVYTEIREEGHYPSVGSWDY-------IYNVKLKNSSVTSIDSNYGYVSKADIGE 291
           Y+ G G   E+R   +YP+ G W Y        Y    KN+  T+++  YG + K +   
Sbjct: 190 YLSG-GPSGELRYPSYYPAAG-WSYPGRGKFQAYTETAKNAFRTAMNDKYGSLDKINTAW 247

Query: 290 GTTMNA 273
           GT + +
Sbjct: 248 GTKLTS 253



to top

>ZAPA_PROMI (Q11137) Extracellular metalloprotease precursor (EC 3.4.24.-)|
          Length = 491

 Score = 30.0 bits (66), Expect = 5.7
 Identities = 15/57 (26%), Positives = 27/57 (47%)
 Frame = -2

Query: 428 YTEIREEGHYPSVGSWDYIYNVKLKNSSVTSIDSNYGYVSKADIGEGTTMNARGVFE 258
           + E+++E    S+ +W  I N+K    +V ++D       K DI  G   +  G F+
Sbjct: 86  FNELQKEHARKSLDAWSDIANIKFTEVAVGNVDGMKASDVKTDITFGNIYDPNGTFQ 142



to top

>NTP1_CBEPV (P24486) Nucleoside triphosphatase I (EC 3.6.1.15) (Nucleoside|
           triphosphate phosphohydrolase I) (NPH I)
          Length = 648

 Score = 30.0 bits (66), Expect = 5.7
 Identities = 14/47 (29%), Positives = 28/47 (59%)
 Frame = +2

Query: 128 IIRSIKMHHKDSKEKNYTSVHGRHTRLEDHNNNSLLATRSSRETRKL 268
           I RS+K   KD+ E+N+T ++ +  +L ++ NN +L   ++  T  +
Sbjct: 157 ISRSVK---KDNNERNFTPIYRKLIKLANYENNKILCMSATPITNNI 200



to top

>ENV_HV2RO (P04577) Envelope polyprotein GP160 precursor [Contains: Exterior|
           membrane glycoprotein (GP120); Transmembrane
           glycoprotein (GP41)]
          Length = 858

 Score = 29.6 bits (65), Expect = 7.4
 Identities = 11/15 (73%), Positives = 13/15 (86%)
 Frame = +2

Query: 161 SKEKNYTSVHGRHTR 205
           +KEK Y+S HGRHTR
Sbjct: 497 TKEKRYSSAHGRHTR 511



to top

>Y018_METJA (Q60324) Hypothetical protein MJ0018|
          Length = 524

 Score = 29.6 bits (65), Expect = 7.4
 Identities = 20/79 (25%), Positives = 41/79 (51%)
 Frame = +3

Query: 192 DATQDLKTTITTRCLQRDLVGKLENSTCVHGSAFTDVSLGNVSIVAINRGDT*IFQLHIV 371
           D + D+  TI ++C++ + +G++     + GSA  +  LGN  ++ IN+     FQ ++ 
Sbjct: 116 DVSGDISKTINSKCVEENAIGEVYGDIYLEGSA--NYKLGN--LLCINK-----FQTYLT 166

Query: 372 DIIPASHTWVVPFLADFSV 428
                S    VP++ +F +
Sbjct: 167 G--SGSLKVYVPYIQEFII 183



to top

>GP152_MOUSE (Q8BXS7) Probable G-protein coupled receptor 152|
          Length = 511

 Score = 29.6 bits (65), Expect = 7.4
 Identities = 13/28 (46%), Positives = 19/28 (67%)
 Frame = -2

Query: 440 GNGVYTEIREEGHYPSVGSWDYIYNVKL 357
           G+G  TE+ +E +YP  GSWD ++ V L
Sbjct: 13  GHGPRTELSDEDYYPQ-GSWDTVFLVAL 39



to top

>ZN335_HUMAN (Q9H4Z2) Zinc finger protein 335|
          Length = 1342

 Score = 29.6 bits (65), Expect = 7.4
 Identities = 14/33 (42%), Positives = 20/33 (60%)
 Frame = -3

Query: 505  ARSPPAAAPAIGCSLGPSPTLVATGCTLKSARK 407
            A SPPA + A+G ++ PSP   AT  + K + K
Sbjct: 990  ASSPPATSKALGLAVPPSPPSAATAASKKFSCK 1022


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 87,952,715
Number of Sequences: 219361
Number of extensions: 1752980
Number of successful extensions: 4552
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 4397
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4551
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5596027262
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top