Clone Information

BLAST Search Result

Clone Name	rbaal15n14
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	ref\|XM_481744.1\| Oryza sativa (japonica cultivar-group), mRNA	660	0.0
2	dbj\|AK100576.1\| Oryza sativa (japonica cultivar-group) cDNA clon...	660	0.0
3	gb\|AY112349.1\| Zea mays CL33377_1 mRNA sequence	422	e-115
4	dbj\|AP008214.1\| Oryza sativa (japonica cultivar-group) genomic D...	212	1e-51
5	dbj\|AP004574.3\| Oryza sativa (japonica cultivar-group) genomic D...	212	1e-51
6	dbj\|AP004706.3\| Oryza sativa (japonica cultivar-group) genomic D...	212	1e-51
7	ref\|NM_111668.2\| Arabidopsis thaliana unknown protein AT3G07890 ...	109	1e-20
8	gb\|BT025552.1\| Arabidopsis thaliana At3g07890 mRNA, complete cds	109	1e-20
9	gb\|AY084232.1\| Arabidopsis thaliana clone 100460 mRNA, complete ...	109	1e-20
10	gb\|AC013483.7\|ATAC013483 Arabidopsis thaliana chromosome III BAC...	64	6e-07
11	emb\|BX682234.9\| Zebrafish DNA sequence from clone CH211-193E13, ...	46	0.14
12	gb\|AC135585.2\| Homo sapiens 12 BAC RP13-646J16 (Roswell Park Can...	42	2.2
13	emb\|AL591070.19\| Mouse DNA sequence from clone RP23-185A18 on ch...	42	2.2
14	emb\|AL669840.5\| Mouse DNA sequence from clone RP23-43J1 on chrom...	42	2.2
15	gb\|AY275681.1\| Homo sapiens mutS homolog 3 (E. coli) (MSH3) gene...	42	2.2
16	gb\|AC137627.10\| Homo sapiens 12 BAC RP11-592H6 (Roswell Park Can...	42	2.2
17	gb\|AC022493.12\|AC022493 Homo sapiens 5 BAC RP11-241J12 (Roswell ...	42	2.2
18	gb\|AE015925.1\| Chlamydophila caviae GPIC, complete genome	42	2.2
19	gb\|CP000150.1\| Burkholderia sp. 383 chromosome 3, complete sequence	40	8.6
20	gb\|AC116409.9\| Mus musculus chromosome 3, clone RP24-337P23, com...	40	8.6
21	gb\|BT016038.1\| Drosophila melanogaster RE01051 full insert cDNA	40	8.6
22	gb\|AC160987.4\| Mus musculus BAC clone RP23-248O24 from chromosom...	40	8.6
23	gb\|BC073482.1\| Xenopus laevis hypothetical protein LOC443650, mR...	40	8.6
24	gb\|AC159638.2\| Mus musculus BAC clone RP24-78C16 from chromosome...	40	8.6
25	gb\|AC123957.4\| Mus musculus BAC clone RP23-302N2 from 12, comple...	40	8.6
26	gb\|AC116592.5\| Mus musculus BAC clone RP24-90K3 from 2, complete...	40	8.6
27	emb\|AL590453.10\| Human DNA sequence from clone RP11-294K17 on ch...	40	8.6
28	gb\|AC123517.2\| Oryza sativa japonica cultivar-group chromosome 1...	40	8.6
29	emb\|AL356141.9\| Human DNA sequence from clone RP11-269L3 on chro...	40	8.6
30	emb\|AL031726.23\|HS1018K9 Human DNA sequence from clone RP5-1018K...	40	8.6
31	ref\|XM_796855.1\| PREDICTED: Strongylocentrotus purpuratus simila...	40	8.6
32	ref\|XM_775105.1\| PREDICTED: Strongylocentrotus purpuratus simila...	40	8.6
33	emb\|BX470090.3\| Mouse DNA sequence from clone RP23-261B11 on chr...	40	8.6
34	emb\|BX537285.6\| Zebrafish DNA sequence from clone DKEY-225N3 in ...	40	8.6
35	ref\|XM_395011.2\| PREDICTED: Apis mellifera similar to ENSANGP000...	40	8.6
36	dbj\|AP008217.1\| Oryza sativa (japonica cultivar-group) genomic D...	40	8.6
37	dbj\|AB009048.1\| Arabidopsis thaliana genomic DNA, chromosome 5, ...	40	8.6
38	dbj\|AK067129.1\| Oryza sativa (japonica cultivar-group) cDNA clon...	40	8.6
39	dbj\|AK062044.1\| Oryza sativa (japonica cultivar-group) cDNA clon...	40	8.6
40	gb\|DP000010.1\| Oryza sativa (japonica cultivar-group) chromosome...	40	8.6
41	emb\|BX004887.2\| Zebrafish DNA sequence from clone CH211-150E4, c...	40	8.6
42	emb\|AL845529.10\| Mouse DNA sequence from clone RP23-276D17 on ch...	40	8.6
43	gb\|AC023481.6\| Homo sapiens chromosome 3 clone RP11-424H6 map 3p...	40	8.6

>ref|XM_481744.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2208

 Score =  660 bits (333), Expect = 0.0
 Identities = 523/585 (89%), Gaps = 1/585 (0%)
 Strand = Plus / Minus

                                                                        
Query: 36   aacgtgagcagctcatcaggctcgtataggtggtgtgcagttgtctgcagaacatcaatt 95
            |||||||| || |||||||| |||||||| || || ||||||||||||| || |||||||
Sbjct: 1756 aacgtgaggagttcatcagggtcgtatagatgatgagcagttgtctgcaaaatatcaatt 1697

                                                                        
Query: 96   acatcaccaatatgttggatgcgtagaagatcgtcttctctcatcttgaaaattgcaaga 155
            ||||||||||||||||| || ||||| ||||| ||||||||||||||||||||||| |||
Sbjct: 1696 acatcaccaatatgttgaatacgtagtagatcatcttctctcatcttgaaaattgccaga 1637

                                                                        
Query: 156  gcgacatggaacaagacctttgccccttcattgaataaaacatcccacacccgaagtgtt 215
            || ||||||||||| || ||||| ||||||||||||| ||||||||| ||||| || |||
Sbjct: 1636 gcaacatggaacaatacttttgctccttcattgaatagaacatcccatacccggagggtt 1577

                                                                        
Query: 216  gtctccgaaggcaacgttttggagaagagacataagaaccattctgtggcaacaagtgaa 275
            ||||| |||||||| || ||||||||||| || ||||||||||||||||||||||| |||
Sbjct: 1576 gtctctgaaggcaaggtcttggagaagaggcacaagaaccattctgtggcaacaagagaa 1517

                                                                        
Query: 276  acatcaaatcccattgcttcaagatgagcagcaatcctggggcattttttagctagaaga 335
            |||||||| ||||||||||||||||||||||||||||||||||| ||||||||||| || 
Sbjct: 1516 acatcaaaccccattgcttcaagatgagcagcaatcctggggcactttttagctaggagg 1457

                                                                        
Query: 336  tctttgaatactctctgctcaacatggcatccagaaagagtatcggtataacaatcactg 395
            |||||||| ||||||||||| |||||||||||||||||| |||| ||||| |||||| ||
Sbjct: 1456 tctttgaaaactctctgctcgacatggcatccagaaagattatcagtatagcaatcattg 1397

                                                                        
Query: 396  acaagaacattctccaagagtacagccagcatccaaaatgcatcttcctctgtcttcata 455
            ||||| ||||| ||||  |||||||| |||||||| ||||||||||||||||||||||||
Sbjct: 1396 acaagtacattttccagtagtacagcaagcatccagaatgcatcttcctctgtcttcata 1337

                                                                        
Query: 456  acgagcaataacagagcagctacataatttaaaccctggcaatatccaacttctgaatca 515
            || ||||| ||||  ||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 1336 acaagcaacaacaatgcagctacataatttaaaccctggcaatatccaacttctgagtca 1277

                                                                        
Query: 516  cggaatgagtacccaacaagtacacgtcgaagagatgcctgaccttcctcgctgttcaac 575
            || |||||||| |||||||| ||||| ||||||||||||||||||||||| ||||||| |
Sbjct: 1276 cgaaatgagtaaccaacaagcacacgccgaagagatgcctgaccttcctcactgttcagc 1217

                                                         
Query: 576  cagggatggcagggggaaggtgcgagggagatcatggtcaatttg 620
            || | ||| ||  || || |||||||||||||||||||| |||||
Sbjct: 1216 caagaatgaca-tggaaatgtgcgagggagatcatggtcgatttg 1173

to top

>dbj|AK100576.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023105H06, full
            insert sequence
          Length = 2207

 Score =  660 bits (333), Expect = 0.0
 Identities = 523/585 (89%), Gaps = 1/585 (0%)
 Strand = Plus / Minus

                                                                        
Query: 36   aacgtgagcagctcatcaggctcgtataggtggtgtgcagttgtctgcagaacatcaatt 95
            |||||||| || |||||||| |||||||| || || ||||||||||||| || |||||||
Sbjct: 1755 aacgtgaggagttcatcagggtcgtatagatgatgagcagttgtctgcaaaatatcaatt 1696

                                                                        
Query: 96   acatcaccaatatgttggatgcgtagaagatcgtcttctctcatcttgaaaattgcaaga 155
            ||||||||||||||||| || ||||| ||||| ||||||||||||||||||||||| |||
Sbjct: 1695 acatcaccaatatgttgaatacgtagtagatcatcttctctcatcttgaaaattgccaga 1636

                                                                        
Query: 156  gcgacatggaacaagacctttgccccttcattgaataaaacatcccacacccgaagtgtt 215
            || ||||||||||| || ||||| ||||||||||||| ||||||||| ||||| || |||
Sbjct: 1635 gcaacatggaacaatacttttgctccttcattgaatagaacatcccatacccggagggtt 1576

                                                                        
Query: 216  gtctccgaaggcaacgttttggagaagagacataagaaccattctgtggcaacaagtgaa 275
            ||||| |||||||| || ||||||||||| || ||||||||||||||||||||||| |||
Sbjct: 1575 gtctctgaaggcaaggtcttggagaagaggcacaagaaccattctgtggcaacaagagaa 1516

                                                                        
Query: 276  acatcaaatcccattgcttcaagatgagcagcaatcctggggcattttttagctagaaga 335
            |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| || 
Sbjct: 1515 acatcaaatcccattgcttcaagatgagcagcaatcctggggcactttttagctaggagg 1456

                                                                        
Query: 336  tctttgaatactctctgctcaacatggcatccagaaagagtatcggtataacaatcactg 395
            |||||||| ||||||||||| |||||||||||||||||| |||| ||||| |||||| ||
Sbjct: 1455 tctttgaaaactctctgctcgacatggcatccagaaagattatcagtatagcaatcattg 1396

                                                                        
Query: 396  acaagaacattctccaagagtacagccagcatccaaaatgcatcttcctctgtcttcata 455
            ||||| ||||| ||||  |||||||| |||||||| ||||||||||||||||||||||||
Sbjct: 1395 acaagtacattttccagtagtacagcaagcatccagaatgcatcttcctctgtcttcata 1336

                                                                        
Query: 456  acgagcaataacagagcagctacataatttaaaccctggcaatatccaacttctgaatca 515
            || ||||| ||||  ||| ||||||||||||||||||||||||||||||||||||| |||
Sbjct: 1335 acaagcaacaacaatgcaactacataatttaaaccctggcaatatccaacttctgagtca 1276

                                                                        
Query: 516  cggaatgagtacccaacaagtacacgtcgaagagatgcctgaccttcctcgctgttcaac 575
            || |||||||| |||||||| ||||| ||||||||||||||||||||||| ||||||| |
Sbjct: 1275 cgaaatgagtaaccaacaagcacacgccgaagagatgcctgaccttcctcactgttcagc 1216

                                                         
Query: 576  cagggatggcagggggaaggtgcgagggagatcatggtcaatttg 620
            || | ||| ||  || || |||||||||||||||||||| |||||
Sbjct: 1215 caagaatgaca-tggaaatgtgcgagggagatcatggtcgatttg 1172

to top

>gb|AY112349.1| Zea mays CL33377_1 mRNA sequence
          Length = 934

 Score =  422 bits (213), Expect = e-115
 Identities = 378/433 (87%)
 Strand = Plus / Plus

                                                                       
Query: 97  catcaccaatatgttggatgcgtagaagatcgtcttctctcatcttgaaaattgcaagag 156
           ||||||| |||||||||||||| || ||||| ||||||| ||||||||||||||| ||||
Sbjct: 495 catcaccgatatgttggatgcgcagtagatcatcttctcgcatcttgaaaattgcgagag 554

                                                                       
Query: 157 cgacatggaacaagacctttgccccttcattgaataaaacatcccacacccgaagtgttg 216
           | ||| ||||||| || || || |||||||||||||| | |||||| |||||||||||||
Sbjct: 555 caacacggaacaaaacattggctccttcattgaataatatatcccatacccgaagtgttg 614

                                                                       
Query: 217 tctccgaaggcaacgttttggagaagagacataagaaccattctgtggcaacaagtgaaa 276
           |||| |||||||   | || |||||||| || || | ||||||||| |||||||||||||
Sbjct: 615 tctctgaaggcaggctctttgagaagaggcacaaaacccattctgtagcaacaagtgaaa 674

                                                                       
Query: 277 catcaaatcccattgcttcaagatgagcagcaatcctggggcattttttagctagaagat 336
           ||||||| |||||||||||||| |||||||||||||| || || || ||||| || ||||
Sbjct: 675 catcaaaccccattgcttcaaggtgagcagcaatccttggacacttcttagccaggagat 734

                                                                       
Query: 337 ctttgaatactctctgctcaacatggcatccagaaagagtatcggtataacaatcactga 396
           ||||||| || |||||||| ||||| |||||||||||||| || ||||| ||||||||||
Sbjct: 735 ctttgaacaccctctgctcgacatgacatccagaaagagtgtcagtatagcaatcactga 794

                                                                       
Query: 397 caagaacattctccaagagtacagccagcatccaaaatgcatcttcctctgtcttcataa 456
           |||| |||||||| | ||||||||| ||||||||||||||||| |||||||||||||| |
Sbjct: 795 caagtacattctcaaggagtacagcaagcatccaaaatgcatcctcctctgtcttcatca 854

                                                                       
Query: 457 cgagcaataacagagcagctacataatttaaaccctggcaatatccaacttctgaatcac 516
           | ||||| || || ||||||||||| |||| ||||||||| || ||||||||||||||||
Sbjct: 855 caagcaacaagagtgcagctacatagtttagaccctggcagtacccaacttctgaatcac 914

                        
Query: 517 ggaatgagtaccc 529
           |||||||||||||
Sbjct: 915 ggaatgagtaccc 927

to top

>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score =  212 bits (107), Expect = 1e-51
 Identities = 164/183 (89%)
 Strand = Plus / Plus

                                                                            
Query: 311      cctggggcattttttagctagaagatctttgaatactctctgctcaacatggcatccaga 370
                ||||||||| ||||||||||| || |||||||| ||||||||||| ||||||||||||||
Sbjct: 15157735 cctggggcactttttagctaggaggtctttgaaaactctctgctcgacatggcatccaga 15157794

                                                                            
Query: 371      aagagtatcggtataacaatcactgacaagaacattctccaagagtacagccagcatcca 430
                |||| |||| ||||| |||||| ||||||| ||||| ||||  |||||||| ||||||||
Sbjct: 15157795 aagattatcagtatagcaatcattgacaagtacattttccagtagtacagcaagcatcca 15157854

                                                                            
Query: 431      aaatgcatcttcctctgtcttcataacgagcaataacagagcagctacataatttaaacc 490
                 |||||||||||||||||||||||||| ||||| ||||  ||||||||||||||||||||
Sbjct: 15157855 gaatgcatcttcctctgtcttcataacaagcaacaacaatgcagctacataatttaaacc 15157914

                   
Query: 491      ctg 493
                |||
Sbjct: 15157915 ctg 15157917



 Score =  137 bits (69), Expect = 5e-29
 Identities = 87/93 (93%)
 Strand = Plus / Plus

                                                                            
Query: 222      gaaggcaacgttttggagaagagacataagaaccattctgtggcaacaagtgaaacatca 281
                |||||||| || ||||||||||| || ||||||||||||||||||||||| |||||||||
Sbjct: 15157527 gaaggcaaggtcttggagaagaggcacaagaaccattctgtggcaacaagagaaacatca 15157586

                                                 
Query: 282      aatcccattgcttcaagatgagcagcaatcctg 314
                || ||||||||||||||||||||||||||||||
Sbjct: 15157587 aaccccattgcttcaagatgagcagcaatcctg 15157619



 Score =  119 bits (60), Expect = 1e-23
 Identities = 78/84 (92%)
 Strand = Plus / Plus

                                                                            
Query: 490      cctggcaatatccaacttctgaatcacggaatgagtacccaacaagtacacgtcgaagag 549
                |||||||||||||||||||||| ||||| |||||||| |||||||| ||||| |||||||
Sbjct: 15157988 cctggcaatatccaacttctgagtcacgaaatgagtaaccaacaagcacacgccgaagag 15158047

                                        
Query: 550      atgcctgaccttcctcgctgttca 573
                |||||||||||||||| |||||||
Sbjct: 15158048 atgcctgaccttcctcactgttca 15158071



 Score =  111 bits (56), Expect = 3e-21
 Identities = 92/104 (88%)
 Strand = Plus / Plus

                                                                            
Query: 38       cgtgagcagctcatcaggctcgtataggtggtgtgcagttgtctgcagaacatcaattac 97
                |||||| || |||||||| |||||||| || || ||||||||||||| || |||||||||
Sbjct: 15157134 cgtgaggagttcatcagggtcgtatagatgatgagcagttgtctgcaaaatatcaattac 15157193

                                                            
Query: 98       atcaccaatatgttggatgcgtagaagatcgtcttctctcatct 141
                ||||||||||||||| || ||||| ||||| |||||||||||||
Sbjct: 15157194 atcaccaatatgttgaatacgtagtagatcatcttctctcatct 15157237



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 71/80 (88%)
 Strand = Plus / Plus

                                                                            
Query: 140      cttgaaaattgcaagagcgacatggaacaagacctttgccccttcattgaataaaacatc 199
                |||||||||||| ||||| ||||||||||| || ||||| ||||||||||||| ||||||
Sbjct: 15157342 cttgaaaattgccagagcaacatggaacaatacttttgctccttcattgaatagaacatc 15157401

                                    
Query: 200      ccacacccgaagtgttgtct 219
                ||| ||||| || |||||||
Sbjct: 15157402 ccatacccggagggttgtct 15157421

to top

>dbj|AP004574.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
            clone:P0702G08
          Length = 144596

 Score =  212 bits (107), Expect = 1e-51
 Identities = 164/183 (89%)
 Strand = Plus / Plus

                                                                        
Query: 311  cctggggcattttttagctagaagatctttgaatactctctgctcaacatggcatccaga 370
            ||||||||| ||||||||||| || |||||||| ||||||||||| ||||||||||||||
Sbjct: 5560 cctggggcactttttagctaggaggtctttgaaaactctctgctcgacatggcatccaga 5619

                                                                        
Query: 371  aagagtatcggtataacaatcactgacaagaacattctccaagagtacagccagcatcca 430
            |||| |||| ||||| |||||| ||||||| ||||| ||||  |||||||| ||||||||
Sbjct: 5620 aagattatcagtatagcaatcattgacaagtacattttccagtagtacagcaagcatcca 5679

                                                                        
Query: 431  aaatgcatcttcctctgtcttcataacgagcaataacagagcagctacataatttaaacc 490
             |||||||||||||||||||||||||| ||||| ||||  ||||||||||||||||||||
Sbjct: 5680 gaatgcatcttcctctgtcttcataacaagcaacaacaatgcagctacataatttaaacc 5739

               
Query: 491  ctg 493
            |||
Sbjct: 5740 ctg 5742



 Score =  137 bits (69), Expect = 5e-29
 Identities = 87/93 (93%)
 Strand = Plus / Plus

                                                                        
Query: 222  gaaggcaacgttttggagaagagacataagaaccattctgtggcaacaagtgaaacatca 281
            |||||||| || ||||||||||| || ||||||||||||||||||||||| |||||||||
Sbjct: 5352 gaaggcaaggtcttggagaagaggcacaagaaccattctgtggcaacaagagaaacatca 5411

                                             
Query: 282  aatcccattgcttcaagatgagcagcaatcctg 314
            || ||||||||||||||||||||||||||||||
Sbjct: 5412 aaccccattgcttcaagatgagcagcaatcctg 5444



 Score =  119 bits (60), Expect = 1e-23
 Identities = 78/84 (92%)
 Strand = Plus / Plus

                                                                        
Query: 490  cctggcaatatccaacttctgaatcacggaatgagtacccaacaagtacacgtcgaagag 549
            |||||||||||||||||||||| ||||| |||||||| |||||||| ||||| |||||||
Sbjct: 5813 cctggcaatatccaacttctgagtcacgaaatgagtaaccaacaagcacacgccgaagag 5872

                                    
Query: 550  atgcctgaccttcctcgctgttca 573
            |||||||||||||||| |||||||
Sbjct: 5873 atgcctgaccttcctcactgttca 5896



 Score =  111 bits (56), Expect = 3e-21
 Identities = 92/104 (88%)
 Strand = Plus / Plus

                                                                        
Query: 38   cgtgagcagctcatcaggctcgtataggtggtgtgcagttgtctgcagaacatcaattac 97
            |||||| || |||||||| |||||||| || || ||||||||||||| || |||||||||
Sbjct: 4959 cgtgaggagttcatcagggtcgtatagatgatgagcagttgtctgcaaaatatcaattac 5018

                                                        
Query: 98   atcaccaatatgttggatgcgtagaagatcgtcttctctcatct 141
            ||||||||||||||| || ||||| ||||| |||||||||||||
Sbjct: 5019 atcaccaatatgttgaatacgtagtagatcatcttctctcatct 5062



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 71/80 (88%)
 Strand = Plus / Plus

                                                                        
Query: 140  cttgaaaattgcaagagcgacatggaacaagacctttgccccttcattgaataaaacatc 199
            |||||||||||| ||||| ||||||||||| || ||||| ||||||||||||| ||||||
Sbjct: 5167 cttgaaaattgccagagcaacatggaacaatacttttgctccttcattgaatagaacatc 5226

                                
Query: 200  ccacacccgaagtgttgtct 219
            ||| ||||| || |||||||
Sbjct: 5227 ccatacccggagggttgtct 5246

to top

>dbj|AP004706.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0683E12
          Length = 165766

 Score =  212 bits (107), Expect = 1e-51
 Identities = 164/183 (89%)
 Strand = Plus / Plus

                                                                          
Query: 311    cctggggcattttttagctagaagatctttgaatactctctgctcaacatggcatccaga 370
              ||||||||| ||||||||||| || |||||||| ||||||||||| ||||||||||||||
Sbjct: 147987 cctggggcactttttagctaggaggtctttgaaaactctctgctcgacatggcatccaga 148046

                                                                          
Query: 371    aagagtatcggtataacaatcactgacaagaacattctccaagagtacagccagcatcca 430
              |||| |||| ||||| |||||| ||||||| ||||| ||||  |||||||| ||||||||
Sbjct: 148047 aagattatcagtatagcaatcattgacaagtacattttccagtagtacagcaagcatcca 148106

                                                                          
Query: 431    aaatgcatcttcctctgtcttcataacgagcaataacagagcagctacataatttaaacc 490
               |||||||||||||||||||||||||| ||||| ||||  ||||||||||||||||||||
Sbjct: 148107 gaatgcatcttcctctgtcttcataacaagcaacaacaatgcagctacataatttaaacc 148166

                 
Query: 491    ctg 493
              |||
Sbjct: 148167 ctg 148169



 Score =  137 bits (69), Expect = 5e-29
 Identities = 87/93 (93%)
 Strand = Plus / Plus

                                                                          
Query: 222    gaaggcaacgttttggagaagagacataagaaccattctgtggcaacaagtgaaacatca 281
              |||||||| || ||||||||||| || ||||||||||||||||||||||| |||||||||
Sbjct: 147779 gaaggcaaggtcttggagaagaggcacaagaaccattctgtggcaacaagagaaacatca 147838

                                               
Query: 282    aatcccattgcttcaagatgagcagcaatcctg 314
              || ||||||||||||||||||||||||||||||
Sbjct: 147839 aaccccattgcttcaagatgagcagcaatcctg 147871



 Score =  119 bits (60), Expect = 1e-23
 Identities = 78/84 (92%)
 Strand = Plus / Plus

                                                                          
Query: 490    cctggcaatatccaacttctgaatcacggaatgagtacccaacaagtacacgtcgaagag 549
              |||||||||||||||||||||| ||||| |||||||| |||||||| ||||| |||||||
Sbjct: 148240 cctggcaatatccaacttctgagtcacgaaatgagtaaccaacaagcacacgccgaagag 148299

                                      
Query: 550    atgcctgaccttcctcgctgttca 573
              |||||||||||||||| |||||||
Sbjct: 148300 atgcctgaccttcctcactgttca 148323



 Score =  111 bits (56), Expect = 3e-21
 Identities = 92/104 (88%)
 Strand = Plus / Plus

                                                                          
Query: 38     cgtgagcagctcatcaggctcgtataggtggtgtgcagttgtctgcagaacatcaattac 97
              |||||| || |||||||| |||||||| || || ||||||||||||| || |||||||||
Sbjct: 147386 cgtgaggagttcatcagggtcgtatagatgatgagcagttgtctgcaaaatatcaattac 147445

                                                          
Query: 98     atcaccaatatgttggatgcgtagaagatcgtcttctctcatct 141
              ||||||||||||||| || ||||| ||||| |||||||||||||
Sbjct: 147446 atcaccaatatgttgaatacgtagtagatcatcttctctcatct 147489



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 71/80 (88%)
 Strand = Plus / Plus

                                                                          
Query: 140    cttgaaaattgcaagagcgacatggaacaagacctttgccccttcattgaataaaacatc 199
              |||||||||||| ||||| ||||||||||| || ||||| ||||||||||||| ||||||
Sbjct: 147594 cttgaaaattgccagagcaacatggaacaatacttttgctccttcattgaatagaacatc 147653

                                  
Query: 200    ccacacccgaagtgttgtct 219
              ||| ||||| || |||||||
Sbjct: 147654 ccatacccggagggttgtct 147673

to top

>ref|NM_111668.2| Arabidopsis thaliana unknown protein AT3G07890 mRNA, complete cds
          Length = 1665

 Score =  109 bits (55), Expect = 1e-20
 Identities = 334/427 (78%)
 Strand = Plus / Minus

                                                                        
Query: 136  tcatcttgaaaattgcaagagcgacatggaacaagacctttgccccttcattgaataaaa 195
            |||||||||| ||||| | |||  ||||||| |  ||||| || ||||||| ||| |  |
Sbjct: 1091 tcatcttgaatattgctaaagctgcatggaatagaaccttcgctccttcatagaaaagta 1032

                                                                        
Query: 196  catcccacacccgaagtgttgtctccgaaggcaacgttttggagaagagacataagaacc 255
            ||||||||||||  || |||||||| ||||| |   |||| |||||||| ||||  ||||
Sbjct: 1031 catcccacacccttagagttgtctctgaaggaaggcttttagagaagaggcatagaaacc 972

                                                                        
Query: 256  attctgtggcaacaagtgaaacatcaaatcccattgcttcaagatgagcagcaatcctgg 315
            |||| ||||| ||||| ||||||||||| |||||  |||||||||||| ||| || |  |
Sbjct: 971  attcagtggctacaagggaaacatcaaagcccatatcttcaagatgagtagctattcgag 912

                                                                        
Query: 316  ggcattttttagctagaagatctttgaatactctctgctcaacatggcatccagaaagag 375
              |||||||  || || | ||||||||| || | |||||||||||| |||||||| |   
Sbjct: 911  aacatttttgggcaagcaaatctttgaaaacccgctgctcaacatgacatccagataagt 852

                                                                        
Query: 376  tatcggtataacaatcactgacaagaacattctccaagagtacagccagcatccaaaatg 435
            |    || |||||||||| ||| |  || || ||||| || || || |||||||| ||||
Sbjct: 851  tggttgtgtaacaatcacggactaatacgttttccaaaaggaccgctagcatccagaatg 792

                                                                        
Query: 436  catcttcctctgtcttcataacgagcaataacagagcagctacataatttaaaccctggc 495
            | ||||| ||||||||||| || || ||||  |  || || || || |||| |||||| |
Sbjct: 791  cgtcttcttctgtcttcatgacaagtaatagtaacgctgcaacgtagtttagaccctgac 732

                                                                        
Query: 496  aatatccaacttctgaatcacggaatgagtacccaacaagtacacgtcgaagagatgcct 555
            |||| ||||| ||||||||||| || || ||||||||||| |||||||| ||||  || |
Sbjct: 731  aatagccaacatctgaatcacgaaaggaatacccaacaagcacacgtcgtagagcagcat 672

                   
Query: 556  gaccttc 562
            |||||||
Sbjct: 671  gaccttc 665

to top

>gb|BT025552.1| Arabidopsis thaliana At3g07890 mRNA, complete cds
          Length = 1203

 Score =  109 bits (55), Expect = 1e-20
 Identities = 334/427 (78%)
 Strand = Plus / Minus

                                                                       
Query: 136 tcatcttgaaaattgcaagagcgacatggaacaagacctttgccccttcattgaataaaa 195
           |||||||||| ||||| | |||  ||||||| |  ||||| || ||||||| ||| |  |
Sbjct: 964 tcatcttgaatattgctaaagctgcatggaatagaaccttcgctccttcatagaaaagta 905

                                                                       
Query: 196 catcccacacccgaagtgttgtctccgaaggcaacgttttggagaagagacataagaacc 255
           ||||||||||||  || |||||||| ||||| |   |||| |||||||| ||||  ||||
Sbjct: 904 catcccacacccttagagttgtctctgaaggaaggcttttagagaagaggcatagaaacc 845

                                                                       
Query: 256 attctgtggcaacaagtgaaacatcaaatcccattgcttcaagatgagcagcaatcctgg 315
           |||| ||||| ||||| ||||||||||| |||||  |||||||||||| ||| || |  |
Sbjct: 844 attcagtggctacaagggaaacatcaaagcccatatcttcaagatgagtagctattcgag 785

                                                                       
Query: 316 ggcattttttagctagaagatctttgaatactctctgctcaacatggcatccagaaagag 375
             |||||||  || || | ||||||||| || | |||||||||||| |||||||| |   
Sbjct: 784 aacatttttgggcaagcaaatctttgaaaacccgctgctcaacatgacatccagataagt 725

                                                                       
Query: 376 tatcggtataacaatcactgacaagaacattctccaagagtacagccagcatccaaaatg 435
           |    || |||||||||| ||| |  || || ||||| || || || |||||||| ||||
Sbjct: 724 tggttgtgtaacaatcacggactaatacgttttccaaaaggaccgctagcatccagaatg 665

                                                                       
Query: 436 catcttcctctgtcttcataacgagcaataacagagcagctacataatttaaaccctggc 495
           | ||||| ||||||||||| || || ||||  |  || || || || |||| |||||| |
Sbjct: 664 cgtcttcttctgtcttcatgacaagtaatagtaacgctgcaacgtagtttagaccctgac 605

                                                                       
Query: 496 aatatccaacttctgaatcacggaatgagtacccaacaagtacacgtcgaagagatgcct 555
           |||| ||||| ||||||||||| || || ||||||||||| |||||||| ||||  || |
Sbjct: 604 aatagccaacatctgaatcacgaaaggaatacccaacaagcacacgtcgtagagcagcat 545

                  
Query: 556 gaccttc 562
           |||||||
Sbjct: 544 gaccttc 538

to top

>gb|AY084232.1| Arabidopsis thaliana clone 100460 mRNA, complete sequence
          Length = 1456

 Score =  109 bits (55), Expect = 1e-20
 Identities = 334/427 (78%)
 Strand = Plus / Minus

                                                                        
Query: 136  tcatcttgaaaattgcaagagcgacatggaacaagacctttgccccttcattgaataaaa 195
            |||||||||| ||||| | |||  ||||||| |  ||||| || ||||||| ||| |  |
Sbjct: 1008 tcatcttgaatattgctaaagctgcatggaatagaaccttcgctccttcatagaaaagta 949

                                                                        
Query: 196  catcccacacccgaagtgttgtctccgaaggcaacgttttggagaagagacataagaacc 255
            ||||||||||||  || |||||||| ||||| |   |||| |||||||| ||||  ||||
Sbjct: 948  catcccacacccttagagttgtctctgaaggaaggcttttagagaagaggcatagaaacc 889

                                                                        
Query: 256  attctgtggcaacaagtgaaacatcaaatcccattgcttcaagatgagcagcaatcctgg 315
            |||| ||||| ||||| ||||||||||| |||||  |||||||||||| ||| || |  |
Sbjct: 888  attcagtggctacaagggaaacatcaaagcccatatcttcaagatgagtagctattcgag 829

                                                                        
Query: 316  ggcattttttagctagaagatctttgaatactctctgctcaacatggcatccagaaagag 375
              |||||||  || || | ||||||||| || | |||||||||||| |||||||| |   
Sbjct: 828  aacatttttgggcaagcaaatctttgaaaacccgctgctcaacatgacatccagataagt 769

                                                                        
Query: 376  tatcggtataacaatcactgacaagaacattctccaagagtacagccagcatccaaaatg 435
            |    || |||||||||| ||| |  || || ||||| || || || |||||||| ||||
Sbjct: 768  tggttgtgtaacaatcacggactaatacgttttccaaaaggaccgctagcatccagaatg 709

                                                                        
Query: 436  catcttcctctgtcttcataacgagcaataacagagcagctacataatttaaaccctggc 495
            | ||||| ||||||||||| || || ||||  |  || || || || |||| |||||| |
Sbjct: 708  cgtcttcttctgtcttcatgacaagtaatagtaacgctgcaacgtagtttagaccctgac 649

                                                                        
Query: 496  aatatccaacttctgaatcacggaatgagtacccaacaagtacacgtcgaagagatgcct 555
            |||| ||||| ||||||||||| || || ||||||||||| |||||||| ||||  || |
Sbjct: 648  aatagccaacatctgaatcacgaaaggaatacccaacaagcacacgtcgtagagcagcat 589

                   
Query: 556  gaccttc 562
            |||||||
Sbjct: 588  gaccttc 582

to top

>gb|AC013483.7|ATAC013483 Arabidopsis thaliana chromosome III BAC F17A17 genomic sequence,
             complete sequence
          Length = 121054

 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 62/72 (86%)
 Strand = Plus / Plus

                                                                         
Query: 232   ttttggagaagagacataagaaccattctgtggcaacaagtgaaacatcaaatcccattg 291
             |||| |||||||| ||||  |||||||| ||||| ||||| ||||||||||| |||||  
Sbjct: 68266 ttttagagaagaggcatagaaaccattcagtggctacaagggaaacatcaaagcccatat 68325

                         
Query: 292   cttcaagatgag 303
             ||||||||||||
Sbjct: 68326 cttcaagatgag 68337



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 62/73 (84%)
 Strand = Plus / Plus

                                                                         
Query: 490   cctggcaatatccaacttctgaatcacggaatgagtacccaacaagtacacgtcgaagag 549
             |||| ||||| ||||| ||||||||||| || || ||||||||||| |||||||| ||||
Sbjct: 68691 cctgacaatagccaacatctgaatcacgaaaggaatacccaacaagcacacgtcgtagag 68750

                          
Query: 550   atgcctgaccttc 562
               || ||||||||
Sbjct: 68751 cagcatgaccttc 68763



 Score = 40.1 bits (20), Expect = 8.6
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 423   agcatccaaaatgcatcttcctctgtcttcat 454
             |||||||| ||||| ||||| |||||||||||
Sbjct: 68540 agcatccagaatgcgtcttcttctgtcttcat 68571



 Score = 40.1 bits (20), Expect = 8.6
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                                 
Query: 335   atctttgaatactctctgctcaacatggcatccaga 370
             ||||||||| || | |||||||||||| ||||||||
Sbjct: 68452 atctttgaaaacccgctgctcaacatgacatccaga 68487

to top

>emb|BX682234.9| Zebrafish DNA sequence from clone CH211-193E13, complete sequence
          Length = 165319

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 240    aagagacataagaaccattctgt 262
              |||||||||||||||||||||||
Sbjct: 121976 aagagacataagaaccattctgt 121954

to top

>gb|AC135585.2| Homo sapiens 12 BAC RP13-646J16 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 35700

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 275   aacatcaaatcccattgcttc 295
             |||||||||||||||||||||
Sbjct: 29158 aacatcaaatcccattgcttc 29178

to top

>emb|AL591070.19| Mouse DNA sequence from clone RP23-185A18 on chromosome 11 Contains the
              3' end of a novel gene, Traf4 gene for Tnf receptor
              associated factor 4, the Nek8 gene for NIMA (never in
              mitosis gene a)-related expressed kinase 8, six novel
              genes, the Rpl23a gene for ribosomal protein L23a, the
              Rab34 gene for RAB34 member of RAS oncogene family, the
              Supt6h gene for suppressor of Ty 6 homolog (S. cerevisiae),
              the Sdf2 gene for stromal cell derived factor 2, the Spag5
              gene for sperm associated antigen 5, the Aldo3 gene for
              aldolase 3 C isoform, the Pigs gene for
              phosphatidylinositol glycan class S and the Unc119 gene for
              unc-119 homolog (C. elegans), complete sequence
          Length = 233242

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 80     ctgcagaacatcaattacatc 100
              |||||||||||||||||||||
Sbjct: 232652 ctgcagaacatcaattacatc 232672

to top

>emb|AL669840.5| Mouse DNA sequence from clone RP23-43J1 on chromosome 11, complete
              sequence
          Length = 103555

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 80     ctgcagaacatcaattacatc 100
              |||||||||||||||||||||
Sbjct: 102146 ctgcagaacatcaattacatc 102126

to top

>gb|AY275681.1| Homo sapiens mutS homolog 3 (E. coli) (MSH3) gene, complete cds
          Length = 223885

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 575   ccagggatggcagggggaagg 595
             |||||||||||||||||||||
Sbjct: 99180 ccagggatggcagggggaagg 99200

to top

>gb|AC137627.10| Homo sapiens 12 BAC RP11-592H6 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 155345

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 275    aacatcaaatcccattgcttc 295
              |||||||||||||||||||||
Sbjct: 106381 aacatcaaatcccattgcttc 106361

to top

>gb|AC022493.12|AC022493 Homo sapiens 5 BAC RP11-241J12 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 153078

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 575    ccagggatggcagggggaagg 595
              |||||||||||||||||||||
Sbjct: 131377 ccagggatggcagggggaagg 131357

to top

>gb|AE015925.1| Chlamydophila caviae GPIC, complete genome
          Length = 1173390

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 178    ccccttcattgaataaaacat 198
              |||||||||||||||||||||
Sbjct: 116308 ccccttcattgaataaaacat 116288

to top

>gb|CP000150.1| Burkholderia sp. 383 chromosome 3, complete sequence
          Length = 1395069

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 301    gagcagcaatcctggggcat 320
              ||||||||||||||||||||
Sbjct: 711229 gagcagcaatcctggggcat 711210

to top

>gb|AC116409.9| Mus musculus chromosome 3, clone RP24-337P23, complete sequence
          Length = 162232

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 233    tttggagaagagacataaga 252
              ||||||||||||||||||||
Sbjct: 128000 tttggagaagagacataaga 127981

to top

>gb|BT016038.1| Drosophila melanogaster RE01051 full insert cDNA
          Length = 3932

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 264 gcaacaagtgaaacatcaaa 283
           ||||||||||||||||||||
Sbjct: 705 gcaacaagtgaaacatcaaa 724

to top

>gb|AC160987.4| Mus musculus BAC clone RP23-248O24 from chromosome 16, complete
             sequence
          Length = 202729

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 416   tacagccagcatccaaaatg 435
             ||||||||||||||||||||
Sbjct: 86558 tacagccagcatccaaaatg 86539

to top

>gb|BC073482.1| Xenopus laevis hypothetical protein LOC443650, mRNA (cDNA clone
            IMAGE:5569991), partial cds
          Length = 3201

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 228  aacgttttggagaagagaca 247
            ||||||||||||||||||||
Sbjct: 3075 aacgttttggagaagagaca 3094

to top

>gb|AC159638.2| Mus musculus BAC clone RP24-78C16 from chromosome 12, complete sequence
          Length = 190196

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 135    ctcatcttgaaaattgcaagagcgacat 162
              ||||||||||||||| ||||||| ||||
Sbjct: 185317 ctcatcttgaaaatttcaagagctacat 185290

to top

>gb|AC123957.4| Mus musculus BAC clone RP23-302N2 from 12, complete sequence
          Length = 206661

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 135    ctcatcttgaaaattgcaagagcgacat 162
              ||||||||||||||| ||||||| ||||
Sbjct: 195714 ctcatcttgaaaatttcaagagctacat 195741

to top

>gb|AC116592.5| Mus musculus BAC clone RP24-90K3 from 2, complete sequence
          Length = 238657

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 412   agagtacagccagcatccaa 431
             ||||||||||||||||||||
Sbjct: 78714 agagtacagccagcatccaa 78733

to top

>emb|AL590453.10| Human DNA sequence from clone RP11-294K17 on chromosome 1 Contains the
             3' end of a novel gene, complete sequence
          Length = 187461

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 128   gtcttctctcatcttgaaaa 147
             ||||||||||||||||||||
Sbjct: 77928 gtcttctctcatcttgaaaa 77909

to top

>gb|AC123517.2| Oryza sativa japonica cultivar-group chromosome 11 clone OSJNBb0074K09,
             complete sequence
          Length = 135363

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 295   caagatgagcagcaatcctg 314
             ||||||||||||||||||||
Sbjct: 47441 caagatgagcagcaatcctg 47422

to top

>emb|AL356141.9| Human DNA sequence from clone RP11-269L3 on chromosome 10, complete
             sequence
          Length = 87871

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 238   agaagagacataagaaccat 257
             ||||||||||||||||||||
Sbjct: 82305 agaagagacataagaaccat 82324

to top

>emb|AL031726.23|HS1018K9 Human DNA sequence from clone RP5-1018K9 on chromosome 1q23.2-24.3
              Contains the 5' end of a novel gene, a novel gene, the
              ATP1B1 gene for Na+/K+ transporting ATPase beta 1
              polypeptide, the 3' end of the NME7 gene for protein
              expressed in non-metastatic cells 7 (nucleoside-diphosphate
              kinase) and a CpG island, complete sequence
          Length = 153624

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 252    aaccattctgtggcaacaag 271
              ||||||||||||||||||||
Sbjct: 118996 aaccattctgtggcaacaag 119015

to top

>ref|XM_796855.1| PREDICTED: Strongylocentrotus purpuratus similar to DNA replication
            licensing factor MCM5 (CDC46 homolog) (P1-CDC46),
            transcript variant 2 (LOC578688), mRNA
          Length = 2252

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 124  gatcgtcttctctcatcttg 143
            ||||||||||||||||||||
Sbjct: 1404 gatcgtcttctctcatcttg 1385

to top

>ref|XM_775105.1| PREDICTED: Strongylocentrotus purpuratus similar to DNA replication
            licensing factor MCM5 (CDC46 homolog) (P1-CDC46),
            transcript variant 1 (LOC578688), mRNA
          Length = 2249

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 124  gatcgtcttctctcatcttg 143
            ||||||||||||||||||||
Sbjct: 1401 gatcgtcttctctcatcttg 1382

to top

>emb|BX470090.3| Mouse DNA sequence from clone RP23-261B11 on chromosome 11, complete
            sequence
          Length = 25819

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 351  tgctcaacatggcatccaga 370
            ||||||||||||||||||||
Sbjct: 2847 tgctcaacatggcatccaga 2866

to top

>emb|BX537285.6| Zebrafish DNA sequence from clone DKEY-225N3 in linkage group 24,
             complete sequence
          Length = 150691

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 8     gttgtctggagccatcttgt 27
             ||||||||||||||||||||
Sbjct: 46469 gttgtctggagccatcttgt 46488

to top

>ref|XM_395011.2| PREDICTED: Apis mellifera similar to ENSANGP00000017555
           (LOC411540), mRNA
          Length = 3408

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 419 agccagcatccaaaatgcatcttcctct 446
           ||||| ||||||||| ||||||||||||
Sbjct: 978 agccatcatccaaaaagcatcttcctct 951

to top

>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 295     caagatgagcagcaatcctg 314
               ||||||||||||||||||||
Sbjct: 5991358 caagatgagcagcaatcctg 5991339

to top

>dbj|AB009048.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K15E6
          Length = 71736

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 131   ttctctcatcttgaaaattg 150
             ||||||||||||||||||||
Sbjct: 52368 ttctctcatcttgaaaattg 52387

to top

>dbj|AK067129.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013095E13, full
            insert sequence
          Length = 2549

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 295  caagatgagcagcaatcctg 314
            ||||||||||||||||||||
Sbjct: 1881 caagatgagcagcaatcctg 1900

to top

>dbj|AK062044.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-044-A08, full
            insert sequence
          Length = 1791

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 295  caagatgagcagcaatcctg 314
            ||||||||||||||||||||
Sbjct: 1123 caagatgagcagcaatcctg 1142

to top

>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 295     caagatgagcagcaatcctg 314
               ||||||||||||||||||||
Sbjct: 6057835 caagatgagcagcaatcctg 6057816

to top

>emb|BX004887.2| Zebrafish DNA sequence from clone CH211-150E4, complete sequence
          Length = 186834

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 8     gttgtctggagccatcttgt 27
             ||||||||||||||||||||
Sbjct: 43449 gttgtctggagccatcttgt 43468

to top

>emb|AL845529.10| Mouse DNA sequence from clone RP23-276D17 on chromosome 2, complete
              sequence
          Length = 166971

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 412    agagtacagccagcatccaa 431
              ||||||||||||||||||||
Sbjct: 141334 agagtacagccagcatccaa 141315

to top

>gb|AC023481.6| Homo sapiens chromosome 3 clone RP11-424H6 map 3p, complete sequence
          Length = 184065

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 433   atgcatcttcctctgtcttcataa 456
             ||||||||| ||||||||||||||
Sbjct: 58722 atgcatctttctctgtcttcataa 58745


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,539,696
Number of Sequences: 3902068
Number of extensions: 5539696
Number of successful extensions: 99294
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 99110
Number of HSP's gapped (non-prelim): 181
length of query: 629
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 606
effective length of database: 17,143,297,704
effective search space: 10388838408624
effective search space used: 10388838408624
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

to top

full-length cDNA and EST

Clone Information

BLAST Search Result